CsaV3_3G020090 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G020090
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr3: 15957763 .. 15958601 (+)
RNA-Seq ExpressionCsaV3_3G020090
SyntenyCsaV3_3G020090
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACCCACACCCCATCTCCCTTGCCGGGTATTGACTGTTACTTCCCCACACGAAGAAACCCGCGAAAGCAACACCCTCTCTCTCTCCCTCTCCCTCTCCCTCTCTTTCCATTGAAGCTTCCATCCTTTTCCCTTTTCTTCCCGTTTCCCAAATATCCTAATCCCCTCCCACCTCAAACAACTGCCGCTCAAGTCAAACCCCCACCTCTTTTTCAACTCCCACTTTTCCCTTTTTCCTTCATTTCATTCATCTTCCTCTTTTCACCCTCATCGCCCCCCTTCCAATTGCAATTCCAGGTATTCTTTCTTCTAATTCTTACTTTTTTTATCCTCTTATTTCAGCTATCAATCTCTCCTCCCTTTCTTTTACAACCGTTGAATGAATTATTGAAGATTCACCAAACTCTCTTGCGTTTTACCGATTTATTTTTTTGTGTAGTTCTAATTAGATCAATGCCCGTCTCTTTATGCGTGTTTGATGCTGATTTTTTTGTAATTAGTTTCCTGTCATTTGATTTTGAATTTTGTTCTCGTTGCCTTCCTGCTTAATCATTTTGGAATATTTTCAAGTTATGATGGTTGTACGCACATTTCAGGATTTCCCATATTATTCTTTTGTCTTCTCCAATCAACATAGCACTTCCATTGTTAATTAATGTTTTTCTCTCGATCTACCATGTTTGTTTCTCACTCTTTGAATAGATTGAGCTCTAACTTGACCTTTGTGGAATGGGTGTTATTCCTTTTTTTATGTGTCTGCAACATGAAAGTATCGATTTTTTTTACTTGGTTTTTTTAAGTAATGGCGAGTCATTGCTTAGTGGCAGCATGACGCCTGA

mRNA sequence

ATGACCCACACCCCATCTCCCTTGCCGGGTATTGACTGTTACTTCCCCACACGAAGAAACCCGCGAAAGCAACACCCTCTCTCTCTCCCTCTCCCTCTCCCTCTCTTTCCATTGAAGCTTCCATCCTTTTCCCTTTTCTTCCCGTTTCCCAAATATCCTAATCCCCTCCCACCTCAAACAACTGCCGCTCAAGTCAAACCCCCACCTCTTTTTCAACTCCCACTTTTCCCTTTTTCCTTCATTTCATTCATCTTCCTCTTTTCACCCTCATCGCCCCCCTTCCAATTGCAATTCCAGTGGCAGCATGACGCCTGA

Coding sequence (CDS)

ATGACCCACACCCCATCTCCCTTGCCGGGTATTGACTGTTACTTCCCCACACGAAGAAACCCGCGAAAGCAACACCCTCTCTCTCTCCCTCTCCCTCTCCCTCTCTTTCCATTGAAGCTTCCATCCTTTTCCCTTTTCTTCCCGTTTCCCAAATATCCTAATCCCCTCCCACCTCAAACAACTGCCGCTCAAGTCAAACCCCCACCTCTTTTTCAACTCCCACTTTTCCCTTTTTCCTTCATTTCATTCATCTTCCTCTTTTCACCCTCATCGCCCCCCTTCCAATTGCAATTCCAGTGGCAGCATGACGCCTGA

Protein sequence

MTHTPSPLPGIDCYFPTRRNPRKQHPLSLPLPLPLFPLKLPSFSLFFPFPKYPNPLPPQTTAAQVKPPPLFQLPLFPFSFISFIFLFSPSSPPFQLQFQWQHDA*
Homology
[Close]
BLAST of CsaV3_3G020090 vs. NCBI nr
Match: KGN57688.1 (hypothetical protein Csa_010243 [Cucumis sativus])

HSP 1 Score: 219.5 bits (558), Expect = 1.3e-53
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0 

Query: 1   MTHTPSPLPGIDCYFPTRRNPRKQHPLSLPLPLPLFPLKLPSFSLFFPFPKYPNPLPPQT 60
           MTHTPSPLPGIDCYFPTRRNPRKQHPLSLPLPLPLFPLKLPSFSLFFPFPKYPNPLPPQT
Sbjct: 1   MTHTPSPLPGIDCYFPTRRNPRKQHPLSLPLPLPLFPLKLPSFSLFFPFPKYPNPLPPQT 60

Query: 61  TAAQVKPPPLFQLPLFPFSFISFIFLFSPSSPPFQLQFQWQHDA 105
           TAAQVKPPPLFQLPLFPFSFISFIFLFSPSSPPFQLQFQWQHDA
Sbjct: 61  TAAQVKPPPLFQLPLFPFSFISFIFLFSPSSPPFQLQFQWQHDA 104

[Close]
BLAST of CsaV3_3G020090 vs. ExPASy TrEMBL
Match: A0A0A0L7C0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G252470 PE=4 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 6.4e-54
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0 

Query: 1   MTHTPSPLPGIDCYFPTRRNPRKQHPLSLPLPLPLFPLKLPSFSLFFPFPKYPNPLPPQT 60
           MTHTPSPLPGIDCYFPTRRNPRKQHPLSLPLPLPLFPLKLPSFSLFFPFPKYPNPLPPQT
Sbjct: 1   MTHTPSPLPGIDCYFPTRRNPRKQHPLSLPLPLPLFPLKLPSFSLFFPFPKYPNPLPPQT 60

Query: 61  TAAQVKPPPLFQLPLFPFSFISFIFLFSPSSPPFQLQFQWQHDA 105
           TAAQVKPPPLFQLPLFPFSFISFIFLFSPSSPPFQLQFQWQHDA
Sbjct: 61  TAAQVKPPPLFQLPLFPFSFISFIFLFSPSSPPFQLQFQWQHDA 104

The following BLAST results are available for this feature:
BLAST of CsaV3_3G020090 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN57688.11.3e-53100.00hypothetical protein Csa_010243 [Cucumis sativus][more]
BLAST of CsaV3_3G020090 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_3G020090 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L7C06.4e-54100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G252470 PE=4 SV=1[more]
BLAST of CsaV3_3G020090 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G020090.1CsaV3_3G020090.1mRNA