CsaV3_3G020040 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G020040
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr3: 15898367 .. 15898593 (+)
RNA-Seq ExpressionCsaV3_3G020040
SyntenyCsaV3_3G020040
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACCTTTTACAAGATATTCAGGTACTCCTACGTAGACAGAGTAGCTATCTTGATTTGACTGGTTTCAGCGCTTCAATTCCTCCTTGAATATACCAAACGTGCTGTGGGCCTTCATACTTGATTATATCAGAGTGCAAGATTTTGTCCTTACTTTACTGCTGTTTGAAATGTATGCTTTCTGTGGGGATATCATTGCTTTATTTGAATCTGATCCCTATTGGTAG

mRNA sequence

ATGAACCTTTTACAAGATATTCAGCGCTTCAATTCCTCCTTGAATATACCAAACGTGCTGTGGGCCTTCATACTTGATTATATCAGAGTGCAAGATTTTGTCCTTACTTTACTGCTGTTTGAAATGTATGCTTTCTGTGGGGATATCATTGCTTTATTTGAATCTGATCCCTATTGGTAG

Coding sequence (CDS)

ATGAACCTTTTACAAGATATTCAGCGCTTCAATTCCTCCTTGAATATACCAAACGTGCTGTGGGCCTTCATACTTGATTATATCAGAGTGCAAGATTTTGTCCTTACTTTACTGCTGTTTGAAATGTATGCTTTCTGTGGGGATATCATTGCTTTATTTGAATCTGATCCCTATTGGTAG

Protein sequence

MNLLQDIQRFNSSLNIPNVLWAFILDYIRVQDFVLTLLLFEMYAFCGDIIALFESDPYW*
Homology
[Close]
BLAST of CsaV3_3G020040 vs. NCBI nr
Match: KGN57682.1 (hypothetical protein Csa_010521 [Cucumis sativus])

HSP 1 Score: 123.2 bits (308), Expect = 7.4e-25
Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 0 

Query: 1  MNLLQDIQRFNSSLNIPNVLWAFILDYIRVQDFVLTLLLFEMYAFCGDIIALFESDPYW 60
          MNLLQDIQRFNSSLNIPNVLWAFILDYIRVQDFVLTLLLFEMYAFCGDIIALFESDPYW
Sbjct: 1  MNLLQDIQRFNSSLNIPNVLWAFILDYIRVQDFVLTLLLFEMYAFCGDIIALFESDPYW 59

[Close]
BLAST of CsaV3_3G020040 vs. ExPASy TrEMBL
Match: A0A0A0LAJ7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G251920 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 3.6e-25
Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 0 

Query: 1  MNLLQDIQRFNSSLNIPNVLWAFILDYIRVQDFVLTLLLFEMYAFCGDIIALFESDPYW 60
          MNLLQDIQRFNSSLNIPNVLWAFILDYIRVQDFVLTLLLFEMYAFCGDIIALFESDPYW
Sbjct: 1  MNLLQDIQRFNSSLNIPNVLWAFILDYIRVQDFVLTLLLFEMYAFCGDIIALFESDPYW 59

The following BLAST results are available for this feature:
BLAST of CsaV3_3G020040 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN57682.17.4e-25100.00hypothetical protein Csa_010521 [Cucumis sativus][more]
BLAST of CsaV3_3G020040 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_3G020040 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LAJ73.6e-25100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G251920 PE=4 SV=1[more]
BLAST of CsaV3_3G020040 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G020040.1CsaV3_3G020040.1mRNA