CsaV3_3G018650 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G018650
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr3: 14377799 .. 14378026 (+)
RNA-Seq ExpressionCsaV3_3G018650
SyntenyCsaV3_3G018650
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAAAAGGAAATAATTCACAAAAAGAACGAAAGTGCGGATGTTGCCATACAAAGATACTCGTGTCCGTACGTCTCAACCCTCTCCACTGCCCACCTTCTTTCGCTACTACCGACGGTTCAGATGCCTTTCCAAATTCAAAATCCCACATTATTGTTCTCCATTTCCAACCCTTTGATTCGAATAATCATCTTGAGAAGCACAACACCTTGCTGTTCGTTGTTTGA

mRNA sequence

ATGGGAAAAGGAAATAATTCACAAAAAGAACGAAAGTGCGGATGTTGCCATACAAAGATACTCGTGTCCGTACGTCTCAACCCTCTCCACTGCCCACCTTCTTTCGCTACTACCGACGGTTCAGATGCCTTTCCAAATTCAAAATCCCACATTATTGTTCTCCATTTCCAACCCTTTGATTCGAATAATCATCTTGAGAAGCACAACACCTTGCTGTTCGTTGTTTGA

Coding sequence (CDS)

ATGGGAAAAGGAAATAATTCACAAAAAGAACGAAAGTGCGGATGTTGCCATACAAAGATACTCGTGTCCGTACGTCTCAACCCTCTCCACTGCCCACCTTCTTTCGCTACTACCGACGGTTCAGATGCCTTTCCAAATTCAAAATCCCACATTATTGTTCTCCATTTCCAACCCTTTGATTCGAATAATCATCTTGAGAAGCACAACACCTTGCTGTTCGTTGTTTGA

Protein sequence

MGKGNNSQKERKCGCCHTKILVSVRLNPLHCPPSFATTDGSDAFPNSKSHIIVLHFQPFDSNNHLEKHNTLLFVV*
Homology
[Close]
BLAST of CsaV3_3G018650 vs. NCBI nr
Match: KGN57544.1 (hypothetical protein Csa_011686 [Cucumis sativus])

HSP 1 Score: 164.9 bits (416), Expect = 2.8e-37
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0 

Query: 1  MGKGNNSQKERKCGCCHTKILVSVRLNPLHCPPSFATTDGSDAFPNSKSHIIVLHFQPFD 60
          MGKGNNSQKERKCGCCHTKILVSVRLNPLHCPPSFATTDGSDAFPNSKSHIIVLHFQPFD
Sbjct: 1  MGKGNNSQKERKCGCCHTKILVSVRLNPLHCPPSFATTDGSDAFPNSKSHIIVLHFQPFD 60

Query: 61 SNNHLEKHNTLLFVV 76
          SNNHLEKHNTLLFVV
Sbjct: 61 SNNHLEKHNTLLFVV 75

[Close]
BLAST of CsaV3_3G018650 vs. ExPASy TrEMBL
Match: A0A0A0L9A6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G207930 PE=4 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 1.4e-37
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0 

Query: 1  MGKGNNSQKERKCGCCHTKILVSVRLNPLHCPPSFATTDGSDAFPNSKSHIIVLHFQPFD 60
          MGKGNNSQKERKCGCCHTKILVSVRLNPLHCPPSFATTDGSDAFPNSKSHIIVLHFQPFD
Sbjct: 1  MGKGNNSQKERKCGCCHTKILVSVRLNPLHCPPSFATTDGSDAFPNSKSHIIVLHFQPFD 60

Query: 61 SNNHLEKHNTLLFVV 76
          SNNHLEKHNTLLFVV
Sbjct: 61 SNNHLEKHNTLLFVV 75

The following BLAST results are available for this feature:
BLAST of CsaV3_3G018650 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN57544.12.8e-37100.00hypothetical protein Csa_011686 [Cucumis sativus][more]
BLAST of CsaV3_3G018650 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_3G018650 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L9A61.4e-37100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G207930 PE=4 SV=1[more]
BLAST of CsaV3_3G018650 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G018650.1CsaV3_3G018650.1mRNA