CsaV3_3G017420 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACTGACGTGATACTGCATATATACGACGTTACGAATAGCGGATCAGATAAGACCAACAATACAATTGTTAATATCAACAAGATCTTCAAGGATGGAATTGGTCTAGGCGGTATCTTCCATAGCGCTGTTCAGGTTTCTCGCTTTCTCCTTTGTTTTTCATTTTCCTTTTTTTCTACGTATTTCCACGTTTATGTAGAGTTAGTAATGACTATTTCGATTGTTTTGTAATATTGTTTACCTTAGATTTTATCTCCCGTATGTTTTTCAGTTTAAGATGAACAATTGGTATCTTCATTGGTTTACATTGGCGGGAGCATCTGCTTAATGATCCAGTAGTATTATTTTGTGTTGCTCTGATTCAGGTTGATATTGTCGTCTTTAGTAGCTTAAGACTTTTGAGAGATTTTGCTCCTTTTATCTTTTCAGTTTGAAATGGTTCTTGTTCGGGAGATATTGGACTCTCCCCGGACCTTATAACTCGATCCTATTTGGTTCTTTCTACATTGTGATATAGCGTTACTAGTTCTATCTCTACTTAAGGAATGTGGAATTTTATGCATTACATTGTTTATTCACTTTTCCGCTCATGTTTCAATCCTATTCTGGCCATGGATAATCACAGATTTTACTCTGAAGTTCTGCACGGCAATGATATTTTCCAAGTTATTTGTTATTTCGTCTGCTTAACTTCAACAGTTGTGGTGTTTTTACATAAGTATGTCATTACTGTCAAACGAACTACAAGGCAGATGAAGCTTTCAGTTTCATTGTGTTGCTCATTGCCGATCATATTTTCCTACCCATAACTTCCCTACATAGAGTTGTGTTTCTAAAGATTGAACAAAGTGTTGGATTAATTGTGTTATGCACTACAGGTTTATGGAGATGATGAATGGTCCTTTGGGTTTTGCGAGCAAGGAACTGGAGTTTTCAGTTGCCCCTCTGGACAGAATCCAATGTACACATATCGTGAAAGTATTAACCTTGGGAGAACAAACTGTTCAATTTTCAAGGTTAACCAGATTTTAAGAGAGCTTAGTAGAGAGTGGCCTGGAAGTTCTTATGACTTACTATCAAGGAACTGTAACCACTTTTGTGATCAGTTCTGTGAGATGCTCAATGTATCAAAGCTTCCAGGTAATGTTGTCTGAGTTCATACCATTATGATCTGTAATCATAACTCATAAGATCTTTGTTTTGAGACAATTTCTCTGTGCATTAATGTTAATCATAAGATCTGTAACTATGATGTTTTATGGAGATAAACACAGAAATACTTTTAAACCTATTAGATTTGCTTGATTAACTTAACATGTTAGCCTTCCCACATTGGCCACTCAGTATATATCTGCATCACCTTGGTTTTAATATAATGTTTATAACGGTTCTACCTTTAAATGGAATCATTTATGTTGAAGAGTGGCCTAAATTGCTCTAAAGAGCTCACTGGGTATGACAATAATAAGTATATCATTGGTCTCTTTAAGATATTGAGGCACACGCTTAGGTCCGACCTAGTCTGAGGTTCAATTCCGCTGCACTGCAAACAGAACATTTTGAAGTCTCACAGAATCATAAAACATGCTACAATTTTACATCTTGTGGGGATCATTGGCTCATAACTGAGTTTAGGGCCTATTTGAAGCATAGATCTTATCAAACACATCTTCATTTTCTTGACATTTTATTTCTCTTTTAACTTTAGTTTTTCTTTATCACATTAACTCTTCTTTTCTCTTCTCTTCTGTGTCATAACTGAGTTTAGGGCCTAGTTGTTACCTTTTTCTAGTCTTTTCATACCCTTTTGACAATTGCTCGCCATTGATTTTCTTCTTTCCATACTTTTTGTTTTTGTCTTTAATCATAAGTGGTGAAAGGTGTGAAAACAGTGTGAAGTTTCAAGGATGTACTGGTTGTATGATTAAGAAATATATTTGATGAAGATCTGGACTTGACAGTGATGTCATAGGATATAATAGTGGAGGTAGACTTGTAGAGACTATTTATTTCTAATTGAGATATTAGTTGCAAATACTTCGCAAGAGTTCATGTGAAGACCGATGGGGAAAAGAATTGTGGGTGTGTGGGGGAGGACTTCTTTTTCCTTTATCTCAACTACAGGATGATGATTCTTTTTTCAGAGGAGAACTCTGATGATGTTTATCTTGTTGTAGGTTGGGTTAATCGGTTTGCCAATGCTGGTGATGCTGCATTGGAAGTAGCTGGAAACACAGCAGTTCGTGTAAGATTTTTACTTCATCATATATAACCGCATAACTGAACAATCATGCATCATTTTCTAAGGGAATTTTACCACAACTTGCATTGTATGCATATTGGCATATTTGAAGATGTTTTCTGTTATGTAATTTGGTCAATTTTTTTTGTTTCCATTCAACTTCCAATGTCTTAGATCTGTGTGATTTTGGTTTCTAAGATCCTAAAAGCTATACAATTTAATAGAAAATTATAAACCACAAGCAAAGAGCTTGGTAATTATAAAATGTGATGAAATAATCGTGCTTCGTTGCATTTCCTATGTGGTGATTGCAGTTCAAACAAGCAAAGACAGAGATCATATCGGCCAGCAAAGTTGCATACCGTTTTCTTCTAGGGGCAACAAACAATGTCATGTCTTCTCCAGAGTCTACTAGTAATTCAAATAGAGGTACTCCTAGATTTCAAGCCGCATGGTTTAAGAATCTCATCACTACTGGTGCGAAACCATCGAGTAGTTCAGAATTAGGAAATCAAGTTGAAGGCACACAGCAGCAACAACAACAATGCAAAGCAAATGAAGATACACCAATGTTGCTCAATTCGCGATCACAACATGATATGTGA ATGACTGACGTGATACTGCATATATACGACGTTACGAATAGCGGATCAGATAAGACCAACAATACAATTGTTAATATCAACAAGATCTTCAAGGATGGAATTGGTCTAGGCGGTATCTTCCATAGCGCTGTTCAGGTTTATGGAGATGATGAATGGTCCTTTGGGTTTTGCGAGCAAGGAACTGGAGTTTTCAGTTGCCCCTCTGGACAGAATCCAATGTACACATATCGTGAAAGTATTAACCTTGGGAGAACAAACTGTTCAATTTTCAAGGTTAACCAGATTTTAAGAGAGCTTAGTAGAGAGTGGCCTGGAAGTTCTTATGACTTACTATCAAGGAACTGTAACCACTTTTGTGATCAGTTCTGTGAGATGCTCAATGTATCAAAGCTTCCAGGTTGGGTTAATCGGTTTGCCAATGCTGGTGATGCTGCATTGGAAGTAGCTGGAAACACAGCAGTTCGTTTCAAACAAGCAAAGACAGAGATCATATCGGCCAGCAAAGTTGCATACCGTTTTCTTCTAGGGGCAACAAACAATGTCATGTCTTCTCCAGAGTCTACTAGTAATTCAAATAGAGGTACTCCTAGATTTCAAGCCGCATGGTTTAAGAATCTCATCACTACTGGTGCGAAACCATCGAGTAGTTCAGAATTAGGAAATCAAGTTGAAGGCACACAGCAGCAACAACAACAATGCAAAGCAAATGAAGATACACCAATGTTGCTCAATTCGCGATCACAACATGATATGTGA ATGACTGACGTGATACTGCATATATACGACGTTACGAATAGCGGATCAGATAAGACCAACAATACAATTGTTAATATCAACAAGATCTTCAAGGATGGAATTGGTCTAGGCGGTATCTTCCATAGCGCTGTTCAGGTTTATGGAGATGATGAATGGTCCTTTGGGTTTTGCGAGCAAGGAACTGGAGTTTTCAGTTGCCCCTCTGGACAGAATCCAATGTACACATATCGTGAAAGTATTAACCTTGGGAGAACAAACTGTTCAATTTTCAAGGTTAACCAGATTTTAAGAGAGCTTAGTAGAGAGTGGCCTGGAAGTTCTTATGACTTACTATCAAGGAACTGTAACCACTTTTGTGATCAGTTCTGTGAGATGCTCAATGTATCAAAGCTTCCAGGTTGGGTTAATCGGTTTGCCAATGCTGGTGATGCTGCATTGGAAGTAGCTGGAAACACAGCAGTTCGTTTCAAACAAGCAAAGACAGAGATCATATCGGCCAGCAAAGTTGCATACCGTTTTCTTCTAGGGGCAACAAACAATGTCATGTCTTCTCCAGAGTCTACTAGTAATTCAAATAGAGGTACTCCTAGATTTCAAGCCGCATGGTTTAAGAATCTCATCACTACTGGTGCGAAACCATCGAGTAGTTCAGAATTAGGAAATCAAGTTGAAGGCACACAGCAGCAACAACAACAATGCAAAGCAAATGAAGATACACCAATGTTGCTCAATTCGCGATCACAACATGATATGTGA MTDVILHIYDVTNSGSDKTNNTIVNINKIFKDGIGLGGIFHSAVQVYGDDEWSFGFCEQGTGVFSCPSGQNPMYTYRESINLGRTNCSIFKVNQILRELSREWPGSSYDLLSRNCNHFCDQFCEMLNVSKLPGWVNRFANAGDAALEVAGNTAVRFKQAKTEIISASKVAYRFLLGATNNVMSSPESTSNSNRGTPRFQAAWFKNLITTGAKPSSSSELGNQVEGTQQQQQQCKANEDTPMLLNSRSQHDM* Homology
BLAST of CsaV3_3G017420 vs. NCBI nr
Match: XP_004140760.1 (deSI-like protein At4g17486 [Cucumis sativus] >KGN57407.1 hypothetical protein Csa_010089 [Cucumis sativus]) HSP 1 Score: 511.9 bits (1317), Expect = 3.1e-141 Identity = 251/251 (100.00%), Postives = 251/251 (100.00%), Query Frame = 0
BLAST of CsaV3_3G017420 vs. NCBI nr
Match: XP_008439288.1 (PREDICTED: deSI-like protein At4g17486 [Cucumis melo] >KAA0033699.1 deSI-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 493.4 bits (1269), Expect = 1.1e-135 Identity = 246/253 (97.23%), Postives = 250/253 (98.81%), Query Frame = 0
BLAST of CsaV3_3G017420 vs. NCBI nr
Match: TYK22991.1 (deSI-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 493.0 bits (1268), Expect = 1.5e-135 Identity = 246/254 (96.85%), Postives = 250/254 (98.43%), Query Frame = 0
BLAST of CsaV3_3G017420 vs. NCBI nr
Match: XP_038877442.1 (deSI-like protein At4g17486 [Benincasa hispida]) HSP 1 Score: 481.5 bits (1238), Expect = 4.5e-132 Identity = 237/251 (94.42%), Postives = 246/251 (98.01%), Query Frame = 0
BLAST of CsaV3_3G017420 vs. NCBI nr
Match: XP_022922622.1 (deSI-like protein At4g17486 [Cucurbita moschata] >KAG6576702.1 DeSI-like protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 473.8 bits (1218), Expect = 9.3e-130 Identity = 233/251 (92.83%), Postives = 243/251 (96.81%), Query Frame = 0
BLAST of CsaV3_3G017420 vs. ExPASy Swiss-Prot
Match: Q93VG8 (DeSI-like protein At4g17486 OS=Arabidopsis thaliana OX=3702 GN=At4g17486 PE=2 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 3.6e-15 Identity = 49/143 (34.27%), Postives = 78/143 (54.55%), Query Frame = 0
BLAST of CsaV3_3G017420 vs. ExPASy Swiss-Prot
Match: Q5PQ09 (Deubiquitinase DESI2 OS=Xenopus laevis OX=8355 GN=desi2 PE=2 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 6.7e-14 Identity = 38/106 (35.85%), Postives = 61/106 (57.55%), Query Frame = 0
BLAST of CsaV3_3G017420 vs. ExPASy Swiss-Prot
Match: H2KZK4 (Desumoylating isopeptidase 1 homolog OS=Caenorhabditis elegans OX=6239 GN=F36D4.5 PE=2 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 3.3e-13 Identity = 40/115 (34.78%), Postives = 63/115 (54.78%), Query Frame = 0
BLAST of CsaV3_3G017420 vs. ExPASy Swiss-Prot
Match: Q6DC39 (Deubiquitinase DESI2 OS=Danio rerio OX=7955 GN=desi2 PE=2 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 7.4e-13 Identity = 44/140 (31.43%), Postives = 75/140 (53.57%), Query Frame = 0
BLAST of CsaV3_3G017420 vs. ExPASy Swiss-Prot
Match: Q5ZIV7 (Deubiquitinase DESI2 OS=Gallus gallus OX=9031 GN=DESI2 PE=2 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 1.3e-12 Identity = 35/106 (33.02%), Postives = 59/106 (55.66%), Query Frame = 0
BLAST of CsaV3_3G017420 vs. ExPASy TrEMBL
Match: A0A0A0L9W2 (PPPDE domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G183900 PE=3 SV=1) HSP 1 Score: 511.9 bits (1317), Expect = 1.5e-141 Identity = 251/251 (100.00%), Postives = 251/251 (100.00%), Query Frame = 0
BLAST of CsaV3_3G017420 vs. ExPASy TrEMBL
Match: A0A5A7SX03 (DeSI-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold239G001700 PE=3 SV=1) HSP 1 Score: 493.4 bits (1269), Expect = 5.5e-136 Identity = 246/253 (97.23%), Postives = 250/253 (98.81%), Query Frame = 0
BLAST of CsaV3_3G017420 vs. ExPASy TrEMBL
Match: A0A1S3AYH1 (deSI-like protein At4g17486 OS=Cucumis melo OX=3656 GN=LOC103484117 PE=3 SV=1) HSP 1 Score: 493.4 bits (1269), Expect = 5.5e-136 Identity = 246/253 (97.23%), Postives = 250/253 (98.81%), Query Frame = 0
BLAST of CsaV3_3G017420 vs. ExPASy TrEMBL
Match: A0A5D3DH57 (DeSI-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold386G00970 PE=3 SV=1) HSP 1 Score: 493.0 bits (1268), Expect = 7.2e-136 Identity = 246/254 (96.85%), Postives = 250/254 (98.43%), Query Frame = 0
BLAST of CsaV3_3G017420 vs. ExPASy TrEMBL
Match: A0A6J1E3T7 (deSI-like protein At4g17486 OS=Cucurbita moschata OX=3662 GN=LOC111430579 PE=3 SV=1) HSP 1 Score: 473.8 bits (1218), Expect = 4.5e-130 Identity = 233/251 (92.83%), Postives = 243/251 (96.81%), Query Frame = 0
BLAST of CsaV3_3G017420 vs. TAIR 10
Match: AT4G25660.1 (PPPDE putative thiol peptidase family protein ) HSP 1 Score: 344.4 bits (882), Expect = 8.0e-95 Identity = 167/254 (65.75%), Postives = 203/254 (79.92%), Query Frame = 0
BLAST of CsaV3_3G017420 vs. TAIR 10
Match: AT4G25680.1 (PPPDE putative thiol peptidase family protein ) HSP 1 Score: 342.4 bits (877), Expect = 3.0e-94 Identity = 167/251 (66.53%), Postives = 201/251 (80.08%), Query Frame = 0
BLAST of CsaV3_3G017420 vs. TAIR 10
Match: AT5G25170.1 (PPPDE putative thiol peptidase family protein ) HSP 1 Score: 97.8 bits (242), Expect = 1.3e-20 Identity = 60/170 (35.29%), Postives = 86/170 (50.59%), Query Frame = 0
BLAST of CsaV3_3G017420 vs. TAIR 10
Match: AT2G25190.1 (PPPDE putative thiol peptidase family protein ) HSP 1 Score: 96.3 bits (238), Expect = 3.8e-20 Identity = 68/209 (32.54%), Postives = 107/209 (51.20%), Query Frame = 0
BLAST of CsaV3_3G017420 vs. TAIR 10
Match: AT1G80690.1 (PPPDE putative thiol peptidase family protein ) HSP 1 Score: 89.0 bits (219), Expect = 6.0e-18 Identity = 62/211 (29.38%), Postives = 103/211 (48.82%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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