Homology
BLAST of CsaV3_3G016720 vs. NCBI nr
Match:
KAE8650448.1 (hypothetical protein Csa_010982 [Cucumis sativus])
HSP 1 Score: 524.6 bits (1350), Expect = 4.7e-145
Identity = 255/255 (100.00%), Postives = 255/255 (100.00%), Query Frame = 0
Query: 1 MQIPRSFCRLFSTFSKSQRAISNSTSLNSIKELHAQLVRAQMHIDPSSISEVIKHYALSP 60
MQIPRSFCRLFSTFSKSQRAISNSTSLNSIKELHAQLVRAQMHIDPSSISEVIKHYALSP
Sbjct: 1 MQIPRSFCRLFSTFSKSQRAISNSTSLNSIKELHAQLVRAQMHIDPSSISEVIKHYALSP 60
Query: 61 QSLPKAHFVFNQIQRPTLLVWNHMIHGLSKSDRPNDAIHFYNTMYYKGIQGSHLTFIFLF 120
QSLPKAHFVFNQIQRPTLLVWNHMIHGLSKSDRPNDAIHFYNTMYYKGIQGSHLTFIFLF
Sbjct: 61 QSLPKAHFVFNQIQRPTLLVWNHMIHGLSKSDRPNDAIHFYNTMYYKGIQGSHLTFIFLF 120
Query: 121 KSCARVSDVRQGQMVRVHSMKLGFESYLFVSNALIHMYVCFGELAMAQKVFDGMLERDVV 180
KSCARVSDVRQGQMVRVHSMKLGFESYLFVSNALIHMYVCFGELAMAQKVFDGMLERDVV
Sbjct: 121 KSCARVSDVRQGQMVRVHSMKLGFESYLFVSNALIHMYVCFGELAMAQKVFDGMLERDVV 180
Query: 181 SWNSIICGYYQFNRFKKVLDLFREMQAINVRADSVTMMKAISATCFLSEWEMGDYLVKKH 240
SWNSIICGYYQFNRFKKVLDLFREMQAINVRADSVTMMKAISATCFLSEWEMGDYLVKKH
Sbjct: 181 SWNSIICGYYQFNRFKKVLDLFREMQAINVRADSVTMMKAISATCFLSEWEMGDYLVKKH 240
Query: 241 FDRYVWTPWYDRFCR 256
FDRYVWTPWYDRFCR
Sbjct: 241 FDRYVWTPWYDRFCR 255
BLAST of CsaV3_3G016720 vs. NCBI nr
Match:
XP_011651133.1 (pentatricopeptide repeat-containing protein At2g22410, mitochondrial [Cucumis sativus])
HSP 1 Score: 480.7 bits (1236), Expect = 7.8e-132
Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 0
Query: 1 MQIPRSFCRLFSTFSKSQRAISNSTSLNSIKELHAQLVRAQMHIDPSSISEVIKHYALSP 60
MQIPRSFCRLFSTFSKSQRAISNSTSLNSIKELHAQLVRAQMHIDPSSISEVIKHYALSP
Sbjct: 1 MQIPRSFCRLFSTFSKSQRAISNSTSLNSIKELHAQLVRAQMHIDPSSISEVIKHYALSP 60
Query: 61 QSLPKAHFVFNQIQRPTLLVWNHMIHGLSKSDRPNDAIHFYNTMYYKGIQGSHLTFIFLF 120
QSLPKAHFVFNQIQRPTLLVWNHMIHGLSKSDRPNDAIHFYNTMYYKGIQGSHLTFIFLF
Sbjct: 61 QSLPKAHFVFNQIQRPTLLVWNHMIHGLSKSDRPNDAIHFYNTMYYKGIQGSHLTFIFLF 120
Query: 121 KSCARVSDVRQGQMVRVHSMKLGFESYLFVSNALIHMYVCFGELAMAQKVFDGMLERDVV 180
KSCARVSDVRQGQMVRVHSMKLGFESYLFVSNALIHMYVCFGELAMAQKVFDGMLERDVV
Sbjct: 121 KSCARVSDVRQGQMVRVHSMKLGFESYLFVSNALIHMYVCFGELAMAQKVFDGMLERDVV 180
Query: 181 SWNSIICGYYQFNRFKKVLDLFREMQAINVRADSVTMMKAISATCFLSEWEMGDYLVK 239
SWNSIICGYYQFNRFKKVLDLFREMQAINVRADSVTMMKAISATCFLSEWEMGDYLVK
Sbjct: 181 SWNSIICGYYQFNRFKKVLDLFREMQAINVRADSVTMMKAISATCFLSEWEMGDYLVK 238
BLAST of CsaV3_3G016720 vs. NCBI nr
Match:
KAA0033606.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 450.7 bits (1158), Expect = 8.6e-123
Identity = 223/238 (93.70%), Postives = 229/238 (96.22%), Query Frame = 0
Query: 1 MQIPRSFCRLFSTFSKSQRAISNSTSLNSIKELHAQLVRAQMHIDPSSISEVIKHYALSP 60
M+IP SFCR FSTFS SQR IS STSLNSIKELHAQLVRAQMHIDPSSISEVIKHYALSP
Sbjct: 53 MKIPISFCRPFSTFSNSQRPISKSTSLNSIKELHAQLVRAQMHIDPSSISEVIKHYALSP 112
Query: 61 QSLPKAHFVFNQIQRPTLLVWNHMIHGLSKSDRPNDAIHFYNTMYYKGIQGSHLTFIFLF 120
QSLPKAH VFNQIQRPTLLVWNHMIHGLSKSDRPNDAI+FYNTMYYKGIQG+HLTFIFLF
Sbjct: 113 QSLPKAHLVFNQIQRPTLLVWNHMIHGLSKSDRPNDAIYFYNTMYYKGIQGNHLTFIFLF 172
Query: 121 KSCARVSDVRQGQMVRVHSMKLGFESYLFVSNALIHMYVCFGELAMAQKVFDGMLERDVV 180
KSCARVSDVRQGQMV +HSMKLGF SYLFVSNALIH YVCFGELAMAQKVFDGMLERDVV
Sbjct: 173 KSCARVSDVRQGQMVHLHSMKLGFGSYLFVSNALIHTYVCFGELAMAQKVFDGMLERDVV 232
Query: 181 SWNSIICGYYQFNRFKKVLDLFREMQAINVRADSVTMMKAISATCFLSEWEMGDYLVK 239
SWNSIICGYYQFNRFKKVLDLFREMQAINVRADS+TMMKAISA+CFLSEWEMGDYLVK
Sbjct: 233 SWNSIICGYYQFNRFKKVLDLFREMQAINVRADSLTMMKAISASCFLSEWEMGDYLVK 290
BLAST of CsaV3_3G016720 vs. NCBI nr
Match:
XP_008439157.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like [Cucumis melo] >XP_008439158.1 PREDICTED: pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like [Cucumis melo])
HSP 1 Score: 450.7 bits (1158), Expect = 8.6e-123
Identity = 223/238 (93.70%), Postives = 229/238 (96.22%), Query Frame = 0
Query: 1 MQIPRSFCRLFSTFSKSQRAISNSTSLNSIKELHAQLVRAQMHIDPSSISEVIKHYALSP 60
M+IP SFCR FSTFS SQR IS STSLNSIKELHAQLVRAQMHIDPSSISEVIKHYALSP
Sbjct: 1 MKIPISFCRPFSTFSNSQRPISKSTSLNSIKELHAQLVRAQMHIDPSSISEVIKHYALSP 60
Query: 61 QSLPKAHFVFNQIQRPTLLVWNHMIHGLSKSDRPNDAIHFYNTMYYKGIQGSHLTFIFLF 120
QSLPKAH VFNQIQRPTLLVWNHMIHGLSKSDRPNDAI+FYNTMYYKGIQG+HLTFIFLF
Sbjct: 61 QSLPKAHLVFNQIQRPTLLVWNHMIHGLSKSDRPNDAIYFYNTMYYKGIQGNHLTFIFLF 120
Query: 121 KSCARVSDVRQGQMVRVHSMKLGFESYLFVSNALIHMYVCFGELAMAQKVFDGMLERDVV 180
KSCARVSDVRQGQMV +HSMKLGF SYLFVSNALIH YVCFGELAMAQKVFDGMLERDVV
Sbjct: 121 KSCARVSDVRQGQMVHLHSMKLGFGSYLFVSNALIHTYVCFGELAMAQKVFDGMLERDVV 180
Query: 181 SWNSIICGYYQFNRFKKVLDLFREMQAINVRADSVTMMKAISATCFLSEWEMGDYLVK 239
SWNSIICGYYQFNRFKKVLDLFREMQAINVRADS+TMMKAISA+CFLSEWEMGDYLVK
Sbjct: 181 SWNSIICGYYQFNRFKKVLDLFREMQAINVRADSLTMMKAISASCFLSEWEMGDYLVK 238
BLAST of CsaV3_3G016720 vs. NCBI nr
Match:
KAG6576751.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 393.7 bits (1010), Expect = 1.2e-105
Identity = 197/241 (81.74%), Postives = 214/241 (88.80%), Query Frame = 0
Query: 1 MQIPRSFCRLFSTF---SKSQRAISNSTSLNSIKELHAQLVRAQMHIDPSSISEVIKHYA 60
M+IPRS CRLFSTF SKSQRA S S SL+SIKELHAQL+R QMH DPSSIS+VIKHYA
Sbjct: 19 MKIPRSVCRLFSTFTETSKSQRATSYSDSLSSIKELHAQLIRTQMHTDPSSISQVIKHYA 78
Query: 61 LSPQSLPKAHFVFNQIQRPTLLVWNHMIHGLSKSDRPNDAIHFYNTMYYKGIQGSHLTFI 120
LSP L KAHFVFNQIQ PTLLVWNHMIHGLSKS RPNDAIHFYN+MYY+GI GS+LTFI
Sbjct: 79 LSPPYLHKAHFVFNQIQGPTLLVWNHMIHGLSKSHRPNDAIHFYNSMYYQGINGSNLTFI 138
Query: 121 FLFKSCARVSDVRQGQMVRVHSMKLGFESYLFVSNALIHMYVCFGELAMAQKVFDGMLER 180
F+FK+CARVSDV QGQ V VH+MKLGFESYLFVSNALIHMY CFGELA+A+KVFDGM ER
Sbjct: 139 FVFKACARVSDVGQGQKVHVHAMKLGFESYLFVSNALIHMYGCFGELAIARKVFDGMPER 198
Query: 181 DVVSWNSIICGYYQFNRFKKVLDLFREMQAINVRADSVTMMKAISATCFLSEWEMGDYLV 239
DVVSWNS+ICGY QFNR+K+VLDLFREMQA+NV ADS+TMMK I A FLSEWEM DYLV
Sbjct: 199 DVVSWNSLICGYCQFNRYKEVLDLFREMQAVNVSADSLTMMKVILACSFLSEWEMADYLV 258
BLAST of CsaV3_3G016720 vs. ExPASy Swiss-Prot
Match:
Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)
HSP 1 Score: 139.0 bits (349), Expect = 7.3e-32
Identity = 85/246 (34.55%), Postives = 127/246 (51.63%), Query Frame = 0
Query: 21 ISNSTSLNSIKELHAQLVRAQMHIDPSSISEVIKHYALSP--QSLPKAHFVFNQIQRPTL 80
+ N +L S++ +HAQ+++ +H ++S++I+ LSP + LP A VF IQ P L
Sbjct: 40 LHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNL 99
Query: 81 LVWNHMIHGLSKSDRPNDAIHFYNTMYYKGIQGSHLTFIFLFKSCARVSDVRQGQMVRVH 140
L+WN M G + S P A+ Y M G+ + TF F+ KSCA+ ++GQ + H
Sbjct: 100 LIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGH 159
Query: 141 SMKLGFESYLFVSNALIHMYVCFGELAMAQKVFD--------------------GMLE-- 200
+KLG + L+V +LI MYV G L A KVFD G +E
Sbjct: 160 VLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENA 219
Query: 201 ---------RDVVSWNSIICGYYQFNRFKKVLDLFREMQAINVRADSVTMMKAISATCFL 234
+DVVSWN++I GY + +K+ L+LF++M NVR D TM+ +SA
Sbjct: 220 QKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQS 279
BLAST of CsaV3_3G016720 vs. ExPASy Swiss-Prot
Match:
Q9MA95 (Putative pentatricopeptide repeat-containing protein At3g05240 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E82 PE=3 SV=2)
HSP 1 Score: 133.7 bits (335), Expect = 3.1e-30
Identity = 68/205 (33.17%), Postives = 115/205 (56.10%), Query Frame = 0
Query: 21 ISNSTSLNSIKELHAQLVRAQMHIDPSSISEVIKHYALSPQ--SLPKAHFVFNQIQRPTL 80
+ N SL + +LH ++++ + + +S +I P+ +L A VF I P++
Sbjct: 13 LENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSV 72
Query: 81 LVWNHMIHGLSKSDRPNDAIHFYNTMYYKGIQGSHLTFIFLFKSCARVSDVRQGQMVRVH 140
+WN MI G S S P+ A+ FY M KG + TF ++ K+C+ + D++ G V
Sbjct: 73 YIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGF 132
Query: 141 SMKLGFESYLFVSNALIHMYVCFGELAMAQKVFDGMLERDVVSWNSIICGYYQFNRFKKV 200
+K GFE ++VS L+HMY+C GE+ +VF+ + + +VV+W S+I G+ NRF
Sbjct: 133 VVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDA 192
Query: 201 LDLFREMQAINVRADSVTMMKAISA 224
++ FREMQ+ V+A+ M+ + A
Sbjct: 193 IEAFREMQSNGVKANETIMVDLLVA 217
BLAST of CsaV3_3G016720 vs. ExPASy Swiss-Prot
Match:
Q9SJG6 (Pentatricopeptide repeat-containing protein At2g42920, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-E75 PE=2 SV=1)
HSP 1 Score: 126.3 bits (316), Expect = 4.9e-28
Identity = 80/270 (29.63%), Postives = 128/270 (47.41%), Query Frame = 0
Query: 25 TSLNSIKELHAQLVRAQMHIDPSSISEVIKHYALSPQSLPKAHFVFNQIQRPTLLVWNHM 84
+++ +K++HA L++ + D + S V+ SP + A+ VF +I VWN +
Sbjct: 36 STMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTI 95
Query: 85 IHGLSKSDRPNDAIHFYNTMYYK--GIQGSHLTFIFLFKSCARVSDVRQGQMVRVHSMKL 144
I G S+S P AI + M ++ LT+ +FK+ R+ R G+ + +K
Sbjct: 96 IRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKE 155
Query: 145 GFESYLFVSNALIHMYVCFGELA-------------------------------MAQKVF 204
G E F+ N ++HMYV G L AQ +F
Sbjct: 156 GLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLF 215
Query: 205 DGMLERDVVSWNSIICGYYQFNRFKKVLDLFREMQAINVRADSVTMMKAISATCFLSEWE 256
D M +R+ VSWNS+I G+ + RFK LD+FREMQ +V+ D TM+ ++A +L E
Sbjct: 216 DEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASE 275
BLAST of CsaV3_3G016720 vs. ExPASy Swiss-Prot
Match:
O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)
HSP 1 Score: 119.0 bits (297), Expect = 7.8e-26
Identity = 76/215 (35.35%), Postives = 114/215 (53.02%), Query Frame = 0
Query: 21 ISNSTSLNSIKELHAQLVRAQMHIDPSSISEVIKHYALSP-QSLPKAHFVFNQIQRPTLL 80
I SL +K+ H ++R DP S S++ ALS SL A VF++I +P
Sbjct: 37 IERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSF 96
Query: 81 VWNHMIHGLSKSDRPNDAI-HFYNTMYYKGIQGSHLTFIFLFKSCARVSDVRQGQMVRVH 140
WN +I + P +I F + + + TF FL K+ A VS + GQ +
Sbjct: 97 AWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGM 156
Query: 141 SMKLGFESYLFVSNALIHMYVCFGELAMAQKVFDGMLERDVVSWNSIICGYYQFNRFKKV 200
++K S +FV+N+LIH Y G+L A KVF + E+DVVSWNS+I G+ Q K
Sbjct: 157 AVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKA 216
Query: 201 LDLFREMQAINVRADSVTMMKAISATCFLSEWEMG 234
L+LF++M++ +V+A VTM+ +SA + E G
Sbjct: 217 LELFKKMESEDVKASHVTMVGVLSACAKIRNLEFG 251
BLAST of CsaV3_3G016720 vs. ExPASy Swiss-Prot
Match:
Q9LUJ2 (Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H56 PE=3 SV=1)
HSP 1 Score: 112.8 bits (281), Expect = 5.6e-24
Identity = 76/221 (34.39%), Postives = 120/221 (54.30%), Query Frame = 0
Query: 20 AISNSTSLNSIKELHAQLVRAQMHIDPSSISEVIKHYAL--SPQSLPKAHFVF-NQIQRP 79
++ N +++ +K H L + + D S+I++++ + +SL A VF N
Sbjct: 38 SLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYG 97
Query: 80 TLLVWNHMIHGLSKSDRPNDAIHFYNTMYYKGIQGSHLTFIFLFKSCARVSDVRQGQMVR 139
T ++N +I G + S N+AI + M GI TF F +CA+ +G ++
Sbjct: 98 TCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAK--SRAKGNGIQ 157
Query: 140 VHSM--KLGFESYLFVSNALIHMYVCFGELAMAQKVFDGMLERDVVSWNSIICGYYQFNR 199
+H + K+G+ LFV N+L+H Y GEL A+KVFD M ER+VVSW S+ICGY + +
Sbjct: 158 IHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDF 217
Query: 200 FKKVLDL-FREMQAINVRADSVTMMKAISATCFLSEWEMGD 235
K +DL FR ++ V +SVTM+ ISA L + E G+
Sbjct: 218 AKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGE 256
BLAST of CsaV3_3G016720 vs. ExPASy TrEMBL
Match:
A0A0A0L8K2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G180230 PE=4 SV=1)
HSP 1 Score: 480.7 bits (1236), Expect = 3.8e-132
Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 0
Query: 1 MQIPRSFCRLFSTFSKSQRAISNSTSLNSIKELHAQLVRAQMHIDPSSISEVIKHYALSP 60
MQIPRSFCRLFSTFSKSQRAISNSTSLNSIKELHAQLVRAQMHIDPSSISEVIKHYALSP
Sbjct: 68 MQIPRSFCRLFSTFSKSQRAISNSTSLNSIKELHAQLVRAQMHIDPSSISEVIKHYALSP 127
Query: 61 QSLPKAHFVFNQIQRPTLLVWNHMIHGLSKSDRPNDAIHFYNTMYYKGIQGSHLTFIFLF 120
QSLPKAHFVFNQIQRPTLLVWNHMIHGLSKSDRPNDAIHFYNTMYYKGIQGSHLTFIFLF
Sbjct: 128 QSLPKAHFVFNQIQRPTLLVWNHMIHGLSKSDRPNDAIHFYNTMYYKGIQGSHLTFIFLF 187
Query: 121 KSCARVSDVRQGQMVRVHSMKLGFESYLFVSNALIHMYVCFGELAMAQKVFDGMLERDVV 180
KSCARVSDVRQGQMVRVHSMKLGFESYLFVSNALIHMYVCFGELAMAQKVFDGMLERDVV
Sbjct: 188 KSCARVSDVRQGQMVRVHSMKLGFESYLFVSNALIHMYVCFGELAMAQKVFDGMLERDVV 247
Query: 181 SWNSIICGYYQFNRFKKVLDLFREMQAINVRADSVTMMKAISATCFLSEWEMGDYLVK 239
SWNSIICGYYQFNRFKKVLDLFREMQAINVRADSVTMMKAISATCFLSEWEMGDYLVK
Sbjct: 248 SWNSIICGYYQFNRFKKVLDLFREMQAINVRADSVTMMKAISATCFLSEWEMGDYLVK 305
BLAST of CsaV3_3G016720 vs. ExPASy TrEMBL
Match:
A0A1S3AYR5 (pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103484038 PE=4 SV=1)
HSP 1 Score: 450.7 bits (1158), Expect = 4.2e-123
Identity = 223/238 (93.70%), Postives = 229/238 (96.22%), Query Frame = 0
Query: 1 MQIPRSFCRLFSTFSKSQRAISNSTSLNSIKELHAQLVRAQMHIDPSSISEVIKHYALSP 60
M+IP SFCR FSTFS SQR IS STSLNSIKELHAQLVRAQMHIDPSSISEVIKHYALSP
Sbjct: 1 MKIPISFCRPFSTFSNSQRPISKSTSLNSIKELHAQLVRAQMHIDPSSISEVIKHYALSP 60
Query: 61 QSLPKAHFVFNQIQRPTLLVWNHMIHGLSKSDRPNDAIHFYNTMYYKGIQGSHLTFIFLF 120
QSLPKAH VFNQIQRPTLLVWNHMIHGLSKSDRPNDAI+FYNTMYYKGIQG+HLTFIFLF
Sbjct: 61 QSLPKAHLVFNQIQRPTLLVWNHMIHGLSKSDRPNDAIYFYNTMYYKGIQGNHLTFIFLF 120
Query: 121 KSCARVSDVRQGQMVRVHSMKLGFESYLFVSNALIHMYVCFGELAMAQKVFDGMLERDVV 180
KSCARVSDVRQGQMV +HSMKLGF SYLFVSNALIH YVCFGELAMAQKVFDGMLERDVV
Sbjct: 121 KSCARVSDVRQGQMVHLHSMKLGFGSYLFVSNALIHTYVCFGELAMAQKVFDGMLERDVV 180
Query: 181 SWNSIICGYYQFNRFKKVLDLFREMQAINVRADSVTMMKAISATCFLSEWEMGDYLVK 239
SWNSIICGYYQFNRFKKVLDLFREMQAINVRADS+TMMKAISA+CFLSEWEMGDYLVK
Sbjct: 181 SWNSIICGYYQFNRFKKVLDLFREMQAINVRADSLTMMKAISASCFLSEWEMGDYLVK 238
BLAST of CsaV3_3G016720 vs. ExPASy TrEMBL
Match:
A0A5A7SUI2 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold239G00410 PE=4 SV=1)
HSP 1 Score: 450.7 bits (1158), Expect = 4.2e-123
Identity = 223/238 (93.70%), Postives = 229/238 (96.22%), Query Frame = 0
Query: 1 MQIPRSFCRLFSTFSKSQRAISNSTSLNSIKELHAQLVRAQMHIDPSSISEVIKHYALSP 60
M+IP SFCR FSTFS SQR IS STSLNSIKELHAQLVRAQMHIDPSSISEVIKHYALSP
Sbjct: 53 MKIPISFCRPFSTFSNSQRPISKSTSLNSIKELHAQLVRAQMHIDPSSISEVIKHYALSP 112
Query: 61 QSLPKAHFVFNQIQRPTLLVWNHMIHGLSKSDRPNDAIHFYNTMYYKGIQGSHLTFIFLF 120
QSLPKAH VFNQIQRPTLLVWNHMIHGLSKSDRPNDAI+FYNTMYYKGIQG+HLTFIFLF
Sbjct: 113 QSLPKAHLVFNQIQRPTLLVWNHMIHGLSKSDRPNDAIYFYNTMYYKGIQGNHLTFIFLF 172
Query: 121 KSCARVSDVRQGQMVRVHSMKLGFESYLFVSNALIHMYVCFGELAMAQKVFDGMLERDVV 180
KSCARVSDVRQGQMV +HSMKLGF SYLFVSNALIH YVCFGELAMAQKVFDGMLERDVV
Sbjct: 173 KSCARVSDVRQGQMVHLHSMKLGFGSYLFVSNALIHTYVCFGELAMAQKVFDGMLERDVV 232
Query: 181 SWNSIICGYYQFNRFKKVLDLFREMQAINVRADSVTMMKAISATCFLSEWEMGDYLVK 239
SWNSIICGYYQFNRFKKVLDLFREMQAINVRADS+TMMKAISA+CFLSEWEMGDYLVK
Sbjct: 233 SWNSIICGYYQFNRFKKVLDLFREMQAINVRADSLTMMKAISASCFLSEWEMGDYLVK 290
BLAST of CsaV3_3G016720 vs. ExPASy TrEMBL
Match:
A0A6J1E9A7 (pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111430570 PE=4 SV=1)
HSP 1 Score: 393.7 bits (1010), Expect = 6.0e-106
Identity = 197/241 (81.74%), Postives = 214/241 (88.80%), Query Frame = 0
Query: 1 MQIPRSFCRLFSTF---SKSQRAISNSTSLNSIKELHAQLVRAQMHIDPSSISEVIKHYA 60
M+IPRS CRLFSTF SKSQRA S S SL+SIKELHAQL+R QMH DPSSIS+VIKHYA
Sbjct: 1 MKIPRSVCRLFSTFTETSKSQRATSYSDSLSSIKELHAQLIRTQMHTDPSSISQVIKHYA 60
Query: 61 LSPQSLPKAHFVFNQIQRPTLLVWNHMIHGLSKSDRPNDAIHFYNTMYYKGIQGSHLTFI 120
LSP L KAHFVFNQIQ PTLLVWNHMIHGLSKS RPNDAIHFYN+MYY+GI GS+LTFI
Sbjct: 61 LSPPYLHKAHFVFNQIQGPTLLVWNHMIHGLSKSHRPNDAIHFYNSMYYQGINGSNLTFI 120
Query: 121 FLFKSCARVSDVRQGQMVRVHSMKLGFESYLFVSNALIHMYVCFGELAMAQKVFDGMLER 180
F+FK+CARVSDV QGQ V VH+MKLGFESYLFVSNALIHMY CFGELA+A+KVFDGM ER
Sbjct: 121 FVFKACARVSDVGQGQKVHVHAMKLGFESYLFVSNALIHMYGCFGELAIARKVFDGMPER 180
Query: 181 DVVSWNSIICGYYQFNRFKKVLDLFREMQAINVRADSVTMMKAISATCFLSEWEMGDYLV 239
DVVSWNS+ICGY QFNR+K+VLDLFREMQA+NV ADS+TMMK I A FLSEWEM DYLV
Sbjct: 181 DVVSWNSLICGYCQFNRYKEVLDLFREMQAVNVSADSLTMMKVILACSFLSEWEMADYLV 240
BLAST of CsaV3_3G016720 vs. ExPASy TrEMBL
Match:
A0A5D3DFA9 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold440G00270 PE=4 SV=1)
HSP 1 Score: 387.1 bits (993), Expect = 5.7e-104
Identity = 187/197 (94.92%), Postives = 192/197 (97.46%), Query Frame = 0
Query: 42 MHIDPSSISEVIKHYALSPQSLPKAHFVFNQIQRPTLLVWNHMIHGLSKSDRPNDAIHFY 101
MHIDPSSISEVIKHYALSPQSLPKAH VFNQIQRPTLLVWNHMIHGLSKSDRPNDAI+FY
Sbjct: 1 MHIDPSSISEVIKHYALSPQSLPKAHLVFNQIQRPTLLVWNHMIHGLSKSDRPNDAIYFY 60
Query: 102 NTMYYKGIQGSHLTFIFLFKSCARVSDVRQGQMVRVHSMKLGFESYLFVSNALIHMYVCF 161
NTMYYKGIQG+HLT IFLFKSCARVSDVRQGQMV +HSMKLGF SYLFVSNALIH YVCF
Sbjct: 61 NTMYYKGIQGNHLTLIFLFKSCARVSDVRQGQMVHLHSMKLGFGSYLFVSNALIHTYVCF 120
Query: 162 GELAMAQKVFDGMLERDVVSWNSIICGYYQFNRFKKVLDLFREMQAINVRADSVTMMKAI 221
GELAMAQKVFDGMLERDVVSWNSIICGYYQFNRFKKVLDLFREMQAINVRADS+TMMKAI
Sbjct: 121 GELAMAQKVFDGMLERDVVSWNSIICGYYQFNRFKKVLDLFREMQAINVRADSLTMMKAI 180
Query: 222 SATCFLSEWEMGDYLVK 239
SA+CFLSEWEMGDYLVK
Sbjct: 181 SASCFLSEWEMGDYLVK 197
BLAST of CsaV3_3G016720 vs. TAIR 10
Match:
AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 139.0 bits (349), Expect = 5.2e-33
Identity = 85/246 (34.55%), Postives = 127/246 (51.63%), Query Frame = 0
Query: 21 ISNSTSLNSIKELHAQLVRAQMHIDPSSISEVIKHYALSP--QSLPKAHFVFNQIQRPTL 80
+ N +L S++ +HAQ+++ +H ++S++I+ LSP + LP A VF IQ P L
Sbjct: 40 LHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNL 99
Query: 81 LVWNHMIHGLSKSDRPNDAIHFYNTMYYKGIQGSHLTFIFLFKSCARVSDVRQGQMVRVH 140
L+WN M G + S P A+ Y M G+ + TF F+ KSCA+ ++GQ + H
Sbjct: 100 LIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGH 159
Query: 141 SMKLGFESYLFVSNALIHMYVCFGELAMAQKVFD--------------------GMLE-- 200
+KLG + L+V +LI MYV G L A KVFD G +E
Sbjct: 160 VLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENA 219
Query: 201 ---------RDVVSWNSIICGYYQFNRFKKVLDLFREMQAINVRADSVTMMKAISATCFL 234
+DVVSWN++I GY + +K+ L+LF++M NVR D TM+ +SA
Sbjct: 220 QKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQS 279
BLAST of CsaV3_3G016720 vs. TAIR 10
Match:
AT3G05240.1 (mitochondrial editing factor 19 )
HSP 1 Score: 133.7 bits (335), Expect = 2.2e-31
Identity = 68/205 (33.17%), Postives = 115/205 (56.10%), Query Frame = 0
Query: 21 ISNSTSLNSIKELHAQLVRAQMHIDPSSISEVIKHYALSPQ--SLPKAHFVFNQIQRPTL 80
+ N SL + +LH ++++ + + +S +I P+ +L A VF I P++
Sbjct: 13 LENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSV 72
Query: 81 LVWNHMIHGLSKSDRPNDAIHFYNTMYYKGIQGSHLTFIFLFKSCARVSDVRQGQMVRVH 140
+WN MI G S S P+ A+ FY M KG + TF ++ K+C+ + D++ G V
Sbjct: 73 YIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGF 132
Query: 141 SMKLGFESYLFVSNALIHMYVCFGELAMAQKVFDGMLERDVVSWNSIICGYYQFNRFKKV 200
+K GFE ++VS L+HMY+C GE+ +VF+ + + +VV+W S+I G+ NRF
Sbjct: 133 VVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDA 192
Query: 201 LDLFREMQAINVRADSVTMMKAISA 224
++ FREMQ+ V+A+ M+ + A
Sbjct: 193 IEAFREMQSNGVKANETIMVDLLVA 217
BLAST of CsaV3_3G016720 vs. TAIR 10
Match:
AT2G42920.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 126.3 bits (316), Expect = 3.5e-29
Identity = 80/270 (29.63%), Postives = 128/270 (47.41%), Query Frame = 0
Query: 25 TSLNSIKELHAQLVRAQMHIDPSSISEVIKHYALSPQSLPKAHFVFNQIQRPTLLVWNHM 84
+++ +K++HA L++ + D + S V+ SP + A+ VF +I VWN +
Sbjct: 36 STMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTI 95
Query: 85 IHGLSKSDRPNDAIHFYNTMYYK--GIQGSHLTFIFLFKSCARVSDVRQGQMVRVHSMKL 144
I G S+S P AI + M ++ LT+ +FK+ R+ R G+ + +K
Sbjct: 96 IRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKE 155
Query: 145 GFESYLFVSNALIHMYVCFGELA-------------------------------MAQKVF 204
G E F+ N ++HMYV G L AQ +F
Sbjct: 156 GLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLF 215
Query: 205 DGMLERDVVSWNSIICGYYQFNRFKKVLDLFREMQAINVRADSVTMMKAISATCFLSEWE 256
D M +R+ VSWNS+I G+ + RFK LD+FREMQ +V+ D TM+ ++A +L E
Sbjct: 216 DEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASE 275
BLAST of CsaV3_3G016720 vs. TAIR 10
Match:
AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 119.0 bits (297), Expect = 5.5e-27
Identity = 76/215 (35.35%), Postives = 114/215 (53.02%), Query Frame = 0
Query: 21 ISNSTSLNSIKELHAQLVRAQMHIDPSSISEVIKHYALSP-QSLPKAHFVFNQIQRPTLL 80
I SL +K+ H ++R DP S S++ ALS SL A VF++I +P
Sbjct: 37 IERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSF 96
Query: 81 VWNHMIHGLSKSDRPNDAI-HFYNTMYYKGIQGSHLTFIFLFKSCARVSDVRQGQMVRVH 140
WN +I + P +I F + + + TF FL K+ A VS + GQ +
Sbjct: 97 AWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGM 156
Query: 141 SMKLGFESYLFVSNALIHMYVCFGELAMAQKVFDGMLERDVVSWNSIICGYYQFNRFKKV 200
++K S +FV+N+LIH Y G+L A KVF + E+DVVSWNS+I G+ Q K
Sbjct: 157 AVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKA 216
Query: 201 LDLFREMQAINVRADSVTMMKAISATCFLSEWEMG 234
L+LF++M++ +V+A VTM+ +SA + E G
Sbjct: 217 LELFKKMESEDVKASHVTMVGVLSACAKIRNLEFG 251
BLAST of CsaV3_3G016720 vs. TAIR 10
Match:
AT3G22690.1 (CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012881), Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1); Has 49784 Blast hits to 14716 proteins in 280 species: Archae - 2; Bacteria - 10; Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0; Other Eukaryotes - 904 (source: NCBI BLink). )
HSP 1 Score: 112.8 bits (281), Expect = 4.0e-25
Identity = 76/221 (34.39%), Postives = 120/221 (54.30%), Query Frame = 0
Query: 20 AISNSTSLNSIKELHAQLVRAQMHIDPSSISEVIKHYAL--SPQSLPKAHFVF-NQIQRP 79
++ N +++ +K H L + + D S+I++++ + +SL A VF N
Sbjct: 38 SLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYG 97
Query: 80 TLLVWNHMIHGLSKSDRPNDAIHFYNTMYYKGIQGSHLTFIFLFKSCARVSDVRQGQMVR 139
T ++N +I G + S N+AI + M GI TF F +CA+ +G ++
Sbjct: 98 TCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAK--SRAKGNGIQ 157
Query: 140 VHSM--KLGFESYLFVSNALIHMYVCFGELAMAQKVFDGMLERDVVSWNSIICGYYQFNR 199
+H + K+G+ LFV N+L+H Y GEL A+KVFD M ER+VVSW S+ICGY + +
Sbjct: 158 IHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDF 217
Query: 200 FKKVLDL-FREMQAINVRADSVTMMKAISATCFLSEWEMGD 235
K +DL FR ++ V +SVTM+ ISA L + E G+
Sbjct: 218 AKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGE 256
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAE8650448.1 | 4.7e-145 | 100.00 | hypothetical protein Csa_010982 [Cucumis sativus] | [more] |
XP_011651133.1 | 7.8e-132 | 100.00 | pentatricopeptide repeat-containing protein At2g22410, mitochondrial [Cucumis sa... | [more] |
KAA0033606.1 | 8.6e-123 | 93.70 | pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] | [more] |
XP_008439157.1 | 8.6e-123 | 93.70 | PREDICTED: pentatricopeptide repeat-containing protein At2g29760, chloroplastic-... | [more] |
KAG6576751.1 | 1.2e-105 | 81.74 | Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... | [more] |
Match Name | E-value | Identity | Description | |
Q9LN01 | 7.3e-32 | 34.55 | Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... | [more] |
Q9MA95 | 3.1e-30 | 33.17 | Putative pentatricopeptide repeat-containing protein At3g05240 OS=Arabidopsis th... | [more] |
Q9SJG6 | 4.9e-28 | 29.63 | Pentatricopeptide repeat-containing protein At2g42920, chloroplastic OS=Arabidop... | [more] |
O82380 | 7.8e-26 | 35.35 | Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... | [more] |
Q9LUJ2 | 5.6e-24 | 34.39 | Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0L8K2 | 3.8e-132 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G180230 PE=4 SV=1 | [more] |
A0A1S3AYR5 | 4.2e-123 | 93.70 | pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like OS=Cuc... | [more] |
A0A5A7SUI2 | 4.2e-123 | 93.70 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A6J1E9A7 | 6.0e-106 | 81.74 | pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like OS=Cuc... | [more] |
A0A5D3DFA9 | 5.7e-104 | 94.92 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
Match Name | E-value | Identity | Description | |
AT1G08070.1 | 5.2e-33 | 34.55 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G05240.1 | 2.2e-31 | 33.17 | mitochondrial editing factor 19 | [more] |
AT2G42920.1 | 3.5e-29 | 29.63 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |
AT2G29760.1 | 5.5e-27 | 35.35 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G22690.1 | 4.0e-25 | 34.39 | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012... | [more] |