CsaV3_3G016630 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G016630
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	RAB6-interacting golgin
Location	chr3: 12449102 .. 12452134 (+)
RNA-Seq Expression	CsaV3_3G016630
Synteny	CsaV3_3G016630

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAAAAGTGTATTTTACCCAAAAATTTTGTATAGAAATTTGTGTGGCAAATTCTCCTAGTTCACGTGCGTAGCACATGCGGCTCAATCGGTCAACCCACGGTTCCAATTACTGAACCTCGACGTTCGTTTTGTGTGCGGATTTGAGCTTTCATTCCCCCATCGAAGAACCTTCAGTTTCCGAGATCTCGCTATCCCCATTTTCTTGCTGTTATCAGCCGCTTTCAGAAACTGGGTTTTTTCGTTTCCATCAAATCCAGAATCCCTTTAAACCATTTTCCCTTCTGATTCTCATTCTGATTCCCACAAGAATTTGCCTTCAGAATCAATGGGTTCCGATCCCTCTCTTTTGCCTGTGATCGGCCCTGATGGACTTGCCAGGGAAGCTCCTGTCATTGCTTACACTGAGAAGGTATTGAATTTTAATTTTGGGCTCTAACATTTTTTCTAATCTACTTCTTTCTTCTTCTTTTCAATTTTACTTACTTGTAATCCAACTGTGTTACAGATAATCGAAGAAGGGAGTCTTCAATTGAGAAAGTACGAATTTTATCTTTACCTTTTCAGATCTAATTTCAGACGCATTTTACGCCTTGCTTTCTTACGTGTTTCTTTTGCTTTCAATTTGATTATCACTTGTTTTTCTATCTTACTGTTGAAGGAAATTGAATTCTGGGACGTTACCCTCGTGTACATTCTTTAGATGTTAACGGATATTGGTATAGGAACTGTTTATTTATAATACAAATTGCTCTAGTATTCAATTAATGGTACCAGAGGAAATCCTGATGGAACCATCCCGGCTTAGTTAAGTTTACTTTTTCCTTGAAGTACAAGTTTGAGCCTTCAATTTATGGAGAGGAACCCCGCCTATCTTCTGAGCTAATAGGATCAGTCTTTATCTTTGAAAATGATACCACATTAGAATCGACATTTGGACCTGTTGTGTTAATTACTCCAAGCATGAAATTAGTGAAATGAAGTTGATTATCCTTCATCAAGGTTTTTTATTTTCCCTTTTTACCTATTTCCTTAAACTTGAAATGTTCTTCATGGCCTGGCTTGTTATTTTGTCTAGATGTATTGATGAAAATTTATCTAAAATTCGGGATGTTGAACGGGAATTGGCAAATCTTACAATGGAGATGAAACTCACATCTGGGCCTAAAAAAGCAGGTTGAGCTCACTCTCAGTTGTTTTATTTTGATTAGTGATTTTCTTGAAATAGTTGACTCACCACCAACTGTGGTTGCATATCTCTAGCTCTTGAACTTTTGCGGAAGAAAATAGAAATGTCAACTGAGAGAGTACGTGCAGCTAAGTTGAAGGAAGAACAAGCAAAGAAGGTTTGCCCCTTGTTAAATCTTTTTATTGTATAACTTTGACTTGAAGCTTGCTGTTTGGCATGTCACTTTGTGCCTGCTCCACAAGTTGCACAGTTCTTTGTGATGTTTTGAACCTAGAATTTAGAGGAAGACAAAATATGAAGAATCTATTCAACAGATTTGTTCTGGTCTTGCCAAACCATTCTCCCCTATTTTTGGCCATGTCTATGCATTTTCTCATTTAGATGTTTGAAGAAGATGCTGATAGCATTGTTCCAAAAAAAAAAAAGAAAAAGAAAATTGATAGATAAGTTCTGTGAGCGTATAATCTCATGGTTGCCATTTCCTTCTTCTTCTTACTGCATTTCACTCAAGCTATTACATCCTTTCTCTGGGATGTTCACAAAATGGAAGGGTTGTAAACCAATTGCTTCTAAATTTATTGCATGTGTTCAACATTGTACATTCATTTGGGCTTGCATCTTAAGATTGTTAACTGCTATTCCAGGAATCTTATATTATGTTTTTCCTTCAGGTTTGGGAAGCAGCATCAAAGGTAGTGCAAGAAGAGGAAGCAGCTAAGCAAAAATTGTGTGAAGACTTGAATCATCTGGTACATATCTCAGCATTGCTTTTGCTTGTGCCAAACTTATACAATTGCTTGATAACATCATTGTTCCTTCTCCAAAGGTTCAAGAAAGCAGTAACTTCCAGTTGACAAGACTTGAAGAACTAAAAAGGCGCATGGAAGCGTTGAATTCAAGTCGAGTATCAACCTCTGTTTCTCATGTAAGTCTTGCATTACATTGCATATGATGTCTCTAATTCAAATCACAACTATAGTGGCTTCTGCTGGTTAGCCATTAACTTAGCCCAATTGAAATACGATGTAATATGTATGCCTTTTGGGTTGCACAGGATGTCATGACAATGGGAGGTGCTCAGAATAGCAGAGTGTCAGATTCTTCTGGAGTTGCTACAACAACAGAAACTGGTGCAAAACCAAATGAAAATGTCCCCAATCAAACAACCAGTGATGCAGCTCCAGTGATAAATGGGCAAAATCAAAAGCCCCCTTCTGAGACAGAAGGAAGAGGAAAAAAGAAAAATCAGTTTCATGGAAGAGGGAAGGGAATTGGAGCAGTGCCTAAAGGAAGAAGCTCTGCAGACTCTGGCTGGACTGGGTCTGGATTTGATGTGGATGGTAGAGCATGAGCTTAAGCACTACAAAAATCAAGATCCAAATTGTCAATATCAATATAAAAAATGGTTCTTTTATTTGAAAAAAAAATAGTACTAAGTGTTATTTTTTCTCCATGTTCACTTTCAGGCCTCAGATGATGGAGTTGTGAGAATATATATTTGACTGGAATAGAAACTATAGATTTAGCCCCGAGTTCTTTGGTATTTCCATTTGGCTCGACTTGCTTTAAAAATTTCTGTGTTGTCACTAACTGCTCTGTTAAGTCGATTCGTTTATTGATGGTGAGTTGTGAAGAGTTGTCTACCATAATTGCTCTCTTTTATTCTTTCACTGAAACAAATGGGCTGAACTAAATCAGAAGTTTATGTTTAATAGCTACTTTGGAACTTGAAAAGTGGTTGGTAACTTTCTAAAACTAGTATTCAATTTTGGGTTGGACAATTCAAATGTTTGTACTCTTTGAAGATAGATATGTTTTGACCATGAAATAAATAATCTACCGAAAG

mRNA sequence

ATGGGTTCCGATCCCTCTCTTTTGCCTGTGATCGGCCCTGATGGACTTGCCAGGGAAGCTCCTGTCATTGCTTACACTGAGAAGATAATCGAAGAAGGGAGTCTTCAATTGAGAAAATGTATTGATGAAAATTTATCTAAAATTCGGGATGTTGAACGGGAATTGGCAAATCTTACAATGGAGATGAAACTCACATCTGGGCCTAAAAAAGCAGCTCTTGAACTTTTGCGGAAGAAAATAGAAATGTCAACTGAGAGAGTACGTGCAGCTAAGTTGAAGGAAGAACAAGCAAAGAAGGTTTGGGAAGCAGCATCAAAGGTAGTGCAAGAAGAGGAAGCAGCTAAGCAAAAATTGTGTGAAGACTTGAATCATCTGGTTCAAGAAAGCAGTAACTTCCAGTTGACAAGACTTGAAGAACTAAAAAGGCGCATGGAAGCGTTGAATTCAAGTCGAGTATCAACCTCTGTTTCTCATGATGTCATGACAATGGGAGGTGCTCAGAATAGCAGAGTGTCAGATTCTTCTGGAGTTGCTACAACAACAGAAACTGGTGCAAAACCAAATGAAAATGTCCCCAATCAAACAACCAGTGATGCAGCTCCAGTGATAAATGGGCAAAATCAAAAGCCCCCTTCTGAGACAGAAGGAAGAGGAAAAAAGAAAAATCAGTTTCATGGAAGAGGGAAGGGAATTGGAGCAGTGCCTAAAGGAAGAAGCTCTGCAGACTCTGGCTGGACTGGGTCTGGATTTGATGTGGATGGTAGAGCATGA

Coding sequence (CDS)

ATGGGTTCCGATCCCTCTCTTTTGCCTGTGATCGGCCCTGATGGACTTGCCAGGGAAGCTCCTGTCATTGCTTACACTGAGAAGATAATCGAAGAAGGGAGTCTTCAATTGAGAAAATGTATTGATGAAAATTTATCTAAAATTCGGGATGTTGAACGGGAATTGGCAAATCTTACAATGGAGATGAAACTCACATCTGGGCCTAAAAAAGCAGCTCTTGAACTTTTGCGGAAGAAAATAGAAATGTCAACTGAGAGAGTACGTGCAGCTAAGTTGAAGGAAGAACAAGCAAAGAAGGTTTGGGAAGCAGCATCAAAGGTAGTGCAAGAAGAGGAAGCAGCTAAGCAAAAATTGTGTGAAGACTTGAATCATCTGGTTCAAGAAAGCAGTAACTTCCAGTTGACAAGACTTGAAGAACTAAAAAGGCGCATGGAAGCGTTGAATTCAAGTCGAGTATCAACCTCTGTTTCTCATGATGTCATGACAATGGGAGGTGCTCAGAATAGCAGAGTGTCAGATTCTTCTGGAGTTGCTACAACAACAGAAACTGGTGCAAAACCAAATGAAAATGTCCCCAATCAAACAACCAGTGATGCAGCTCCAGTGATAAATGGGCAAAATCAAAAGCCCCCTTCTGAGACAGAAGGAAGAGGAAAAAAGAAAAATCAGTTTCATGGAAGAGGGAAGGGAATTGGAGCAGTGCCTAAAGGAAGAAGCTCTGCAGACTCTGGCTGGACTGGGTCTGGATTTGATGTGGATGGTAGAGCATGA

Protein sequence

MGSDPSLLPVIGPDGLAREAPVIAYTEKIIEEGSLQLRKCIDENLSKIRDVERELANLTMEMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKVWEAASKVVQEEEAAKQKLCEDLNHLVQESSNFQLTRLEELKRRMEALNSSRVSTSVSHDVMTMGGAQNSRVSDSSGVATTTETGAKPNENVPNQTTSDAAPVINGQNQKPPSETEGRGKKKNQFHGRGKGIGAVPKGRSSADSGWTGSGFDVDGRA*

Homology

[Close]

BLAST of CsaV3_3G016630 vs. NCBI nr
Match: XP_011651127.1 (uncharacterized protein LOC101210795 [Cucumis sativus] >KAE8650444.1 hypothetical protein Csa_011331 [Cucumis sativus])

HSP 1 Score: 472.6 bits (1215), Expect = 2.1e-129
Identity = 256/256 (100.00%), Postives = 256/256 (100.00%), Query Frame = 0


Query: 1   MGSDPSLLPVIGPDGLAREAPVIAYTEKIIEEGSLQLRKCIDENLSKIRDVERELANLTM 60
           MGSDPSLLPVIGPDGLAREAPVIAYTEKIIEEGSLQLRKCIDENLSKIRDVERELANLTM
Sbjct: 1   MGSDPSLLPVIGPDGLAREAPVIAYTEKIIEEGSLQLRKCIDENLSKIRDVERELANLTM 60

Query: 61  EMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKVWEAASKVVQEEEAAKQKLCE 120
           EMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKVWEAASKVVQEEEAAKQKLCE
Sbjct: 61  EMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKVWEAASKVVQEEEAAKQKLCE 120

Query: 121 DLNHLVQESSNFQLTRLEELKRRMEALNSSRVSTSVSHDVMTMGGAQNSRVSDSSGVATT 180
           DLNHLVQESSNFQLTRLEELKRRMEALNSSRVSTSVSHDVMTMGGAQNSRVSDSSGVATT
Sbjct: 121 DLNHLVQESSNFQLTRLEELKRRMEALNSSRVSTSVSHDVMTMGGAQNSRVSDSSGVATT 180

Query: 181 TETGAKPNENVPNQTTSDAAPVINGQNQKPPSETEGRGKKKNQFHGRGKGIGAVPKGRSS 240
           TETGAKPNENVPNQTTSDAAPVINGQNQKPPSETEGRGKKKNQFHGRGKGIGAVPKGRSS
Sbjct: 181 TETGAKPNENVPNQTTSDAAPVINGQNQKPPSETEGRGKKKNQFHGRGKGIGAVPKGRSS 240

Query: 241 ADSGWTGSGFDVDGRA 257
           ADSGWTGSGFDVDGRA
Sbjct: 241 ADSGWTGSGFDVDGRA 256

[Close]

BLAST of CsaV3_3G016630 vs. NCBI nr
Match: KAA0033596.1 (hypothetical protein E6C27_scaffold239G00290 [Cucumis melo var. makuwa] >TYK22262.1 hypothetical protein E5676_scaffold440G00140 [Cucumis melo var. makuwa])

HSP 1 Score: 458.0 bits (1177), Expect = 5.4e-125
Identity = 249/256 (97.27%), Postives = 250/256 (97.66%), Query Frame = 0


Query: 1   MGSDPSLLPVIGPDGLAREAPVIAYTEKIIEEGSLQLRKCIDENLSKIRDVERELANLTM 60
           MGSDPSLLP IGPDGLAREAPVIAYTEKIIEEGSLQLRKCIDENLSKIRDVERELANLTM
Sbjct: 1   MGSDPSLLPEIGPDGLAREAPVIAYTEKIIEEGSLQLRKCIDENLSKIRDVERELANLTM 60

Query: 61  EMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKVWEAASKVVQEEEAAKQKLCE 120
           EMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKVWEAASKVVQ+EEA KQKLCE
Sbjct: 61  EMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKVWEAASKVVQDEEATKQKLCE 120

Query: 121 DLNHLVQESSNFQLTRLEELKRRMEALNSSRVSTSVSHDVMTMGGAQNSRVSDSSGVATT 180
           DLNHLVQESSNFQLTRLEELKRRMEALNSSRVSTSVSHDV  MGGAQNSRVSDSS VATT
Sbjct: 121 DLNHLVQESSNFQLTRLEELKRRMEALNSSRVSTSVSHDVKAMGGAQNSRVSDSSAVATT 180

Query: 181 TETGAKPNENVPNQTTSDAAPVINGQNQKPPSETEGRGKKKNQFHGRGKGIGAVPKGRSS 240
           TETGAK NENVPNQTTSDAAPVINGQNQKPPSETEGRGKKKNQFHGRGKGIGAVPKGRSS
Sbjct: 181 TETGAKTNENVPNQTTSDAAPVINGQNQKPPSETEGRGKKKNQFHGRGKGIGAVPKGRSS 240

Query: 241 ADSGWTGSGFDVDGRA 257
           ADSGWTGSGFDVDGRA
Sbjct: 241 ADSGWTGSGFDVDGRA 256

[Close]

BLAST of CsaV3_3G016630 vs. NCBI nr
Match: XP_038898541.1 (uncharacterized protein LOC120086143 [Benincasa hispida])

HSP 1 Score: 443.7 bits (1140), Expect = 1.1e-120
Identity = 240/256 (93.75%), Postives = 247/256 (96.48%), Query Frame = 0


Query: 1   MGSDPSLLPVIGPDGLAREAPVIAYTEKIIEEGSLQLRKCIDENLSKIRDVERELANLTM 60
           MGSDPSLLP IGPDGLAREAPVIAYTEKIIEEGSLQLRKCIDENLSKIRDVERELANLTM
Sbjct: 1   MGSDPSLLPEIGPDGLAREAPVIAYTEKIIEEGSLQLRKCIDENLSKIRDVERELANLTM 60

Query: 61  EMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKVWEAASKVVQEEEAAKQKLCE 120
           EMKLTSGPKKAALELLRKKIE+STERVRAAKLKEEQAKKVWEAASKVVQ+EEAAKQKLCE
Sbjct: 61  EMKLTSGPKKAALELLRKKIEVSTERVRAAKLKEEQAKKVWEAASKVVQDEEAAKQKLCE 120

Query: 121 DLNHLVQESSNFQLTRLEELKRRMEALNSSRVSTSVSHDVMTMGGAQNSRVSDSSGVATT 180
           DLNHLVQESSNFQLTRLEELKRRMEALNS+RVSTS+SHDV TMGGAQNSR +DSSGVAT+
Sbjct: 121 DLNHLVQESSNFQLTRLEELKRRMEALNSNRVSTSISHDVKTMGGAQNSRDADSSGVATS 180

Query: 181 TETGAKPNENVPNQTTSDAAPVINGQNQKPPSETEGRGKKKNQFHGRGKGIGAVPKGRSS 240
           TETGAK +ENVPN    D APVINGQNQKPPSETEGRGKKKNQFHGRGKGIGAVPKGRSS
Sbjct: 181 TETGAKASENVPNHIARDGAPVINGQNQKPPSETEGRGKKKNQFHGRGKGIGAVPKGRSS 240

Query: 241 ADSGWTGSGFDVDGRA 257
           ADSGWTGSGFDVDGRA
Sbjct: 241 ADSGWTGSGFDVDGRA 256

[Close]

BLAST of CsaV3_3G016630 vs. NCBI nr
Match: XP_008439146.1 (PREDICTED: uncharacterized protein LOC103484029 [Cucumis melo])

HSP 1 Score: 389.4 bits (999), Expect = 2.4e-104
Identity = 215/229 (93.89%), Postives = 218/229 (95.20%), Query Frame = 0


Query: 1   MGSDPSLLPVIGPDGLAREAPVIAYTEKIIEEGSLQLRKCIDENLSKIRDVERELANLTM 60
           MGSDPSLLP IGPDGLAREAPVIAYTEKIIEEGSLQLRKCIDENLSKIRDVERELANLTM
Sbjct: 1   MGSDPSLLPEIGPDGLAREAPVIAYTEKIIEEGSLQLRKCIDENLSKIRDVERELANLTM 60

Query: 61  EMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKVWEAASKVVQEEEAAKQKLCE 120
           EMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKVWEAASKVVQ+EEA KQKLCE
Sbjct: 61  EMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKVWEAASKVVQDEEATKQKLCE 120

Query: 121 DLNHLVQESSNFQLTRLEELKRRMEALNSSRVSTSVSHDVMTMGGAQNSRVSDSSGVATT 180
           DLNHLVQESSNFQLTRLEELKRRMEALNSSRVSTSVSHDV  MGGAQNSRVSDSS VATT
Sbjct: 121 DLNHLVQESSNFQLTRLEELKRRMEALNSSRVSTSVSHDVKAMGGAQNSRVSDSSAVATT 180

Query: 181 TETGAKPNENVPNQTTSDAAPVINGQNQKPPSETEGRGKKKNQFHGRGK 230
           TETGAK NENVPNQTTSDAAPVINGQNQKPPSETEGRGK+K  F   G+
Sbjct: 181 TETGAKTNENVPNQTTSDAAPVINGQNQKPPSETEGRGKRKTSFMEEGR 229

[Close]

BLAST of CsaV3_3G016630 vs. NCBI nr
Match: KAG6574142.1 (hypothetical protein SDJN03_28029, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 389.0 bits (998), Expect = 3.1e-104
Identity = 221/259 (85.33%), Postives = 231/259 (89.19%), Query Frame = 0


Query: 1   MGSDPSLLPVIGPDGLAREAPVIAYTEKIIEEGSLQLRKCIDENLSKIRDVERELANLTM 60
           MGSDP LLP IGPDGLAREAPVIAYTEKIIEEG LQLRK IDEN SKIRDVERELA LTM
Sbjct: 1   MGSDPFLLPEIGPDGLAREAPVIAYTEKIIEEGRLQLRKYIDENYSKIRDVERELAELTM 60

Query: 61  EMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKVWEAASKVVQEEEAAKQKLCE 120
           EMKLTSGPKKAALELLRKKIEMSTER+ AAKLKEEQAKK WEAASKVVQ+EEA KQKLC+
Sbjct: 61  EMKLTSGPKKAALELLRKKIEMSTERIHAAKLKEEQAKKAWEAASKVVQDEEAIKQKLCD 120

Query: 121 DLNHLVQESSNFQLTRLEELKRRMEALNSSRVSTSVS---HDVMTMGGAQNSRVSDSSGV 180
           DLNHLVQES+N QLTRLEELKRRMEALNS+RVSTSVS    +  TMG AQNSRV+DSSGV
Sbjct: 121 DLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSQVTQEGQTMGNAQNSRVADSSGV 180

Query: 181 ATTTE-TGAKPNENVPNQTTSDAAPVINGQNQKPPSETEGRGKKKNQFHGRGKGIGAVPK 240
           AT+TE TGAK NE+   Q  S  APV+NGQNQKP SETE RGKKKNQFHGRGKGIGAVPK
Sbjct: 181 ATSTEITGAKANESARIQAVSGDAPVVNGQNQKPSSETEVRGKKKNQFHGRGKGIGAVPK 240

Query: 241 GRSSADSGWTGSGFDVDGR 256
           GRSSADSGWTGSGFDVDGR
Sbjct: 241 GRSSADSGWTGSGFDVDGR 259

[Close]

BLAST of CsaV3_3G016630 vs. ExPASy TrEMBL
Match: A0A5D3DFA0 (RAB6-interacting golgin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold440G00140 PE=3 SV=1)

HSP 1 Score: 458.0 bits (1177), Expect = 2.6e-125
Identity = 249/256 (97.27%), Postives = 250/256 (97.66%), Query Frame = 0


Query: 1   MGSDPSLLPVIGPDGLAREAPVIAYTEKIIEEGSLQLRKCIDENLSKIRDVERELANLTM 60
           MGSDPSLLP IGPDGLAREAPVIAYTEKIIEEGSLQLRKCIDENLSKIRDVERELANLTM
Sbjct: 1   MGSDPSLLPEIGPDGLAREAPVIAYTEKIIEEGSLQLRKCIDENLSKIRDVERELANLTM 60

Query: 61  EMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKVWEAASKVVQEEEAAKQKLCE 120
           EMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKVWEAASKVVQ+EEA KQKLCE
Sbjct: 61  EMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKVWEAASKVVQDEEATKQKLCE 120

Query: 121 DLNHLVQESSNFQLTRLEELKRRMEALNSSRVSTSVSHDVMTMGGAQNSRVSDSSGVATT 180
           DLNHLVQESSNFQLTRLEELKRRMEALNSSRVSTSVSHDV  MGGAQNSRVSDSS VATT
Sbjct: 121 DLNHLVQESSNFQLTRLEELKRRMEALNSSRVSTSVSHDVKAMGGAQNSRVSDSSAVATT 180

Query: 181 TETGAKPNENVPNQTTSDAAPVINGQNQKPPSETEGRGKKKNQFHGRGKGIGAVPKGRSS 240
           TETGAK NENVPNQTTSDAAPVINGQNQKPPSETEGRGKKKNQFHGRGKGIGAVPKGRSS
Sbjct: 181 TETGAKTNENVPNQTTSDAAPVINGQNQKPPSETEGRGKKKNQFHGRGKGIGAVPKGRSS 240

Query: 241 ADSGWTGSGFDVDGRA 257
           ADSGWTGSGFDVDGRA
Sbjct: 241 ADSGWTGSGFDVDGRA 256

[Close]

BLAST of CsaV3_3G016630 vs. ExPASy TrEMBL
Match: A0A0A0L8J1 (RAB6-interacting golgin OS=Cucumis sativus OX=3659 GN=Csa_3G179140 PE=3 SV=1)

HSP 1 Score: 423.7 bits (1088), Expect = 5.5e-115
Identity = 237/256 (92.58%), Postives = 237/256 (92.58%), Query Frame = 0


Query: 1   MGSDPSLLPVIGPDGLAREAPVIAYTEKIIEEGSLQLRKCIDENLSKIRDVERELANLTM 60
           MGSDPSLLP                   IIEEGSLQLRKCIDENLSKIRDVERELANLTM
Sbjct: 1   MGSDPSLLP-------------------IIEEGSLQLRKCIDENLSKIRDVERELANLTM 60

Query: 61  EMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKVWEAASKVVQEEEAAKQKLCE 120
           EMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKVWEAASKVVQEEEAAKQKLCE
Sbjct: 61  EMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKVWEAASKVVQEEEAAKQKLCE 120

Query: 121 DLNHLVQESSNFQLTRLEELKRRMEALNSSRVSTSVSHDVMTMGGAQNSRVSDSSGVATT 180
           DLNHLVQESSNFQLTRLEELKRRMEALNSSRVSTSVSHDVMTMGGAQNSRVSDSSGVATT
Sbjct: 121 DLNHLVQESSNFQLTRLEELKRRMEALNSSRVSTSVSHDVMTMGGAQNSRVSDSSGVATT 180

Query: 181 TETGAKPNENVPNQTTSDAAPVINGQNQKPPSETEGRGKKKNQFHGRGKGIGAVPKGRSS 240
           TETGAKPNENVPNQTTSDAAPVINGQNQKPPSETEGRGKKKNQFHGRGKGIGAVPKGRSS
Sbjct: 181 TETGAKPNENVPNQTTSDAAPVINGQNQKPPSETEGRGKKKNQFHGRGKGIGAVPKGRSS 237

Query: 241 ADSGWTGSGFDVDGRA 257
           ADSGWTGSGFDVDGRA
Sbjct: 241 ADSGWTGSGFDVDGRA 237

[Close]

BLAST of CsaV3_3G016630 vs. ExPASy TrEMBL
Match: A0A1S3AY16 (RAB6-interacting golgin OS=Cucumis melo OX=3656 GN=LOC103484029 PE=3 SV=1)

HSP 1 Score: 389.4 bits (999), Expect = 1.1e-104
Identity = 215/229 (93.89%), Postives = 218/229 (95.20%), Query Frame = 0


Query: 1   MGSDPSLLPVIGPDGLAREAPVIAYTEKIIEEGSLQLRKCIDENLSKIRDVERELANLTM 60
           MGSDPSLLP IGPDGLAREAPVIAYTEKIIEEGSLQLRKCIDENLSKIRDVERELANLTM
Sbjct: 1   MGSDPSLLPEIGPDGLAREAPVIAYTEKIIEEGSLQLRKCIDENLSKIRDVERELANLTM 60

Query: 61  EMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKVWEAASKVVQEEEAAKQKLCE 120
           EMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKVWEAASKVVQ+EEA KQKLCE
Sbjct: 61  EMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKVWEAASKVVQDEEATKQKLCE 120

Query: 121 DLNHLVQESSNFQLTRLEELKRRMEALNSSRVSTSVSHDVMTMGGAQNSRVSDSSGVATT 180
           DLNHLVQESSNFQLTRLEELKRRMEALNSSRVSTSVSHDV  MGGAQNSRVSDSS VATT
Sbjct: 121 DLNHLVQESSNFQLTRLEELKRRMEALNSSRVSTSVSHDVKAMGGAQNSRVSDSSAVATT 180

Query: 181 TETGAKPNENVPNQTTSDAAPVINGQNQKPPSETEGRGKKKNQFHGRGK 230
           TETGAK NENVPNQTTSDAAPVINGQNQKPPSETEGRGK+K  F   G+
Sbjct: 181 TETGAKTNENVPNQTTSDAAPVINGQNQKPPSETEGRGKRKTSFMEEGR 229

[Close]

BLAST of CsaV3_3G016630 vs. ExPASy TrEMBL
Match: A0A6J1G2D4 (uncharacterized protein LOC111450054 OS=Cucurbita moschata OX=3662 GN=LOC111450054 PE=4 SV=1)

HSP 1 Score: 389.0 bits (998), Expect = 1.5e-104
Identity = 221/259 (85.33%), Postives = 231/259 (89.19%), Query Frame = 0


Query: 1   MGSDPSLLPVIGPDGLAREAPVIAYTEKIIEEGSLQLRKCIDENLSKIRDVERELANLTM 60
           MGSDP LLP IGPDGLAREAPVIAYTEKIIEEG LQLRK IDEN SKIRDVERELA LTM
Sbjct: 1   MGSDPFLLPEIGPDGLAREAPVIAYTEKIIEEGRLQLRKYIDENYSKIRDVERELAELTM 60

Query: 61  EMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKVWEAASKVVQEEEAAKQKLCE 120
           EMKLTSGPKKAALELLRKKIEMSTER+ AAKLKEEQAKK WEAASKVVQ+EEA KQKLC+
Sbjct: 61  EMKLTSGPKKAALELLRKKIEMSTERIHAAKLKEEQAKKAWEAASKVVQDEEAIKQKLCD 120

Query: 121 DLNHLVQESSNFQLTRLEELKRRMEALNSSRVSTSVS---HDVMTMGGAQNSRVSDSSGV 180
           DLNHLVQES+N QLTRLEELKRRMEALNS+RVSTSVS    +  TMG AQNSRV+DSSGV
Sbjct: 121 DLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSQVTQEGQTMGNAQNSRVADSSGV 180

Query: 181 ATTTE-TGAKPNENVPNQTTSDAAPVINGQNQKPPSETEGRGKKKNQFHGRGKGIGAVPK 240
           AT+TE TGAK NE+   Q  S  APV+NGQNQKP SETE RGKKKNQFHGRGKGIGAVPK
Sbjct: 181 ATSTETTGAKANESARIQAVSGDAPVVNGQNQKPSSETEVRGKKKNQFHGRGKGIGAVPK 240

Query: 241 GRSSADSGWTGSGFDVDGR 256
           GRSSADSGWTGSGFDVDGR
Sbjct: 241 GRSSADSGWTGSGFDVDGR 259

[Close]

BLAST of CsaV3_3G016630 vs. ExPASy TrEMBL
Match: A0A6J1HV58 (uncharacterized protein LOC111467736 OS=Cucurbita maxima OX=3661 GN=LOC111467736 PE=4 SV=1)

HSP 1 Score: 386.0 bits (990), Expect = 1.3e-103
Identity = 220/259 (84.94%), Postives = 230/259 (88.80%), Query Frame = 0


Query: 1   MGSDPSLLPVIGPDGLAREAPVIAYTEKIIEEGSLQLRKCIDENLSKIRDVERELANLTM 60
           MGSDP LLP IGPDGLAREAPVIAYTEKIIEEG LQLRK IDEN SKIRDVERELA LTM
Sbjct: 1   MGSDPFLLPEIGPDGLAREAPVIAYTEKIIEEGRLQLRKYIDENYSKIRDVERELAELTM 60

Query: 61  EMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKVWEAASKVVQEEEAAKQKLCE 120
           EMKLTSGPKKAALELLRKKIEMSTER+ AAKLKEEQAKK WEAASKVVQ+EEA KQKLC+
Sbjct: 61  EMKLTSGPKKAALELLRKKIEMSTERIHAAKLKEEQAKKAWEAASKVVQDEEAIKQKLCD 120

Query: 121 DLNHLVQESSNFQLTRLEELKRRMEALNSSRVSTSVS---HDVMTMGGAQNSRVSDSSGV 180
           DLNHLVQES+N QLTRLEELKRRMEALNS+RVSTSVS    +  TM  AQNSRV+DSSGV
Sbjct: 121 DLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSQVTQEGQTMRSAQNSRVADSSGV 180

Query: 181 ATTTE-TGAKPNENVPNQTTSDAAPVINGQNQKPPSETEGRGKKKNQFHGRGKGIGAVPK 240
           AT+TE TGAK NE+   Q  S  APV+NGQNQKP SETE RGKKKNQFHGRGKGIGAVPK
Sbjct: 181 ATSTETTGAKANESARIQAVSGDAPVVNGQNQKPSSETEVRGKKKNQFHGRGKGIGAVPK 240

Query: 241 GRSSADSGWTGSGFDVDGR 256
           GRSSADSGWTGSGFDVDGR
Sbjct: 241 GRSSADSGWTGSGFDVDGR 259

[Close]

BLAST of CsaV3_3G016630 vs. TAIR 10
Match: AT5G51840.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 239.2 bits (609), Expect = 3.7e-63
Identity = 152/257 (59.14%), Postives = 181/257 (70.43%), Query Frame = 0


Query: 1   MGSDPSLLPVIGPDGLAREAPVIAYTEKIIEEGSLQLRKCIDENLSKIRDVERELANLTM 60
           M SDP L   IG DGLAREAPVIAYTEKIIEE  +QLRK I+EN +KIRDVERE  NL+M
Sbjct: 2   MASDPKLKAEIGADGLAREAPVIAYTEKIIEEEQVQLRKYIEENYTKIRDVEREFGNLSM 61

Query: 61  EMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKVWEAASKVVQEEEAAKQKLCE 120
           E+KLT+GPKKAA+E LRKKIE+STER+ AAKLKEE+A+K +EAASKVV++EEA KQ LCE
Sbjct: 62  ELKLTAGPKKAAMEHLRKKIEVSTERIHAAKLKEEEARKAFEAASKVVKDEEATKQSLCE 121

Query: 121 DLNHLVQESSNFQLTRLEELKRRMEALNSSRVSTSVSHDVMTMGGAQNSRVSDSSGVATT 180
           DLN LVQ+SSN Q  RLEELKRR+EALN +R STS+      +   +   V DS+  A  
Sbjct: 122 DLNSLVQQSSNTQYARLEELKRRLEALNPNRSSTSIQQ----VQEPETKSVVDSAPAANA 181

Query: 181 TET-GAKPNENVPNQTTSDAAPVINGQNQKP-PSETEGRGKKKNQFHGRGKGIGAVPKGR 240
            +T   KP  N  N+             Q+P  +E E + KKK Q  GRG+GIG + KGR
Sbjct: 182 NQTHPGKPENNHGNEEGG------KEHGQRPATAEGESKAKKKPQNQGRGRGIGIMNKGR 241

Query: 241 SSADSGWTGSGFDVDGR 256
                GWTG+GFDVDGR
Sbjct: 242 ----GGWTGAGFDVDGR 244

The following BLAST results are available for this feature:

BLAST of CsaV3_3G016630 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011651127.1	2.1e-129	100.00	uncharacterized protein LOC101210795 [Cucumis sativus] >KAE8650444.1 hypothetica...	[more]
KAA0033596.1	5.4e-125	97.27	hypothetical protein E6C27_scaffold239G00290 [Cucumis melo var. makuwa] >TYK2226...	[more]
XP_038898541.1	1.1e-120	93.75	uncharacterized protein LOC120086143 [Benincasa hispida]	[more]
XP_008439146.1	2.4e-104	93.89	PREDICTED: uncharacterized protein LOC103484029 [Cucumis melo]	[more]
KAG6574142.1	3.1e-104	85.33	hypothetical protein SDJN03_28029, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of CsaV3_3G016630 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_3G016630 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DFA0	2.6e-125	97.27	RAB6-interacting golgin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0L8J1	5.5e-115	92.58	RAB6-interacting golgin OS=Cucumis sativus OX=3659 GN=Csa_3G179140 PE=3 SV=1	[more]
A0A1S3AY16	1.1e-104	93.89	RAB6-interacting golgin OS=Cucumis melo OX=3656 GN=LOC103484029 PE=3 SV=1	[more]
A0A6J1G2D4	1.5e-104	85.33	uncharacterized protein LOC111450054 OS=Cucurbita moschata OX=3662 GN=LOC1114500...	[more]
A0A6J1HV58	1.3e-103	84.94	uncharacterized protein LOC111467736 OS=Cucurbita maxima OX=3661 GN=LOC111467736...	[more]

BLAST of CsaV3_3G016630 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G51840.1	3.7e-63	59.14	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 73..93
None	No IPR available	COILS	Coil	Coil	coord: 41..61
None	No IPR available	COILS	Coil	Coil	coord: 108..128
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 164..256
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 164..212
None	No IPR available	PANTHER	PTHR35315	ACI13	coord: 1..252
IPR007033	RAB6-interacting golgin	PFAM	PF04949	Transcrip_act	coord: 26..145 e-value: 1.4E-6 score: 28.3

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G016630.1	CsaV3_3G016630.1	mRNA