CsaV3_3G016380 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGATTTTGAAAGTTCAAAGAATGGCAACGACCATGCTCTGTGCGCCAACAACTGTGGGTTTTATGGAAATCCGAACAATCGAAACTTGTGCTCCGTTTGTTATGCTGCTTTTCTTAAAGAAACCGGGGCAAAATATTTTGAACGACAAAAGAGCTCAAAAAGTCAGATTAATCTTGAAACGAGACAATCTTCTTATTTTGGTGTATCGGAGAATCTTGAAACTTGTGATCACAATGATCCAGCGCCACCGAAAACCCAAAATAGATGCGAAATTTGCCAGAAGAAGGTCGGAATGATTGGATTTAGCTGCCAATGTGGAGGTTGTTTTTGCGGCAAACATAGGTATCCTGAAGAGCATTCGTGCGGCTTTGATCACAAGGAGGTTGGGCGCAAGATTTTGGCCAAGCAAATGGTTGAACGCAAGGCCGATAAATTGGAGTTTAGAATTTAGAATGATATTGTTTTATTTCTTTTTTATTTACTGAGAATGTTATAATATAATTAGTCATATTTCATAATTTTCAAAGCATTTTCTTTCCCTCTTCTCTTATAATTTGAATGAATAGAAAGGATGATTATCAATTTAGTAATAGACAGTTAATAGTTTATTAATAAAATTTTCTTATATTTCTAAATTATTGTTATCGAATAAAATGAGTATTTTTAGGATTTAGGACAATCTTCCGTAATCGTTGTCGGCAATCTTCGAATACCCTTACCAACCAACCTTCCATCACTACCCATCATTCTTGAAAGAATGTAATAAAAATATGTGTAGTATATATAACAAAAACTTGAATATATACAAATTATTTTTTGAAAAAAATAAAAACACATTTGAGTTTTTATTTTAACAAGTTGTTAAAGAAACGGTTTAGATGAAAATGAATTTTTGAAATACATTTGGATCATCTATATTTATTTAGGTAGAGAAATACCTAATTTAGTTTAATAACAATTTTTTTAATTTAACGAATCTAAAGAATATAATTATCTTTTAAAACTTTATGATCCTTTTATTCTTCAAGTACAATTTGATAAAATTATTATAATTTTTCGATAATAGAATTCAATATTAAAATACTAATTTATTTCAATTTGAAGCTAGTATATTAGGAGTAAAAAGCATACCCTTCTCAACAGGTAAATATATATATAATATTAAATTAACTAGGTTTAATAAAATCACGTATCAATTATATTATAAAATTTTATAAACTATATAGTTTGAACTATGTTTATTTTTACTATATCAGTAATTGTGTTTTTAATTAACTTTAAGCTAATTTCAAAATTATTTAACATGATTTGAATTTGTTTTGAAATTTAATTTTCGATTTCAGTCCCATTTTCGTGTATCTTTTCATTAGAGCTGAGTTCTCTGGCCTGGGCCGGTTCATACAGCAGATTTCATAA ATGGCGGATTTTGAAAGTTCAAAGAATGGCAACGACCATGCTCTGTGCGCCAACAACTGTGGGTTTTATGGAAATCCGAACAATCGAAACTTGTGCTCCGTTTGTTATGCTGCTTTTCTTAAAGAAACCGGGGCAAAATATTTTGAACGACAAAAGAGCTCAAAAAGTCAGATTAATCTTGAAACGAGACAATCTTCTTATTTTGGTGTATCGGAGAATCTTGAAACTTGTGATCACAATGATCCAGCGCCACCGAAAACCCAAAATAGATGCGAAATTTGCCAGAAGAAGGTCGGAATGATTGGATTTAGCTGCCAATGTGGAGGTTGTTTTTGCGGCAAACATAGGTATCCTGAAGAGCATTCGTGCGGCTTTGATCACAAGGAGGTTGGGCGCAAGATTTTGGCCAAGCAAATGGTTGAACGCAAGGCCGATAAATTGGAAGCTGAGTTCTCTGGCCTGGGCCGGTTCATACAGCAGATTTCATAA ATGGCGGATTTTGAAAGTTCAAAGAATGGCAACGACCATGCTCTGTGCGCCAACAACTGTGGGTTTTATGGAAATCCGAACAATCGAAACTTGTGCTCCGTTTGTTATGCTGCTTTTCTTAAAGAAACCGGGGCAAAATATTTTGAACGACAAAAGAGCTCAAAAAGTCAGATTAATCTTGAAACGAGACAATCTTCTTATTTTGGTGTATCGGAGAATCTTGAAACTTGTGATCACAATGATCCAGCGCCACCGAAAACCCAAAATAGATGCGAAATTTGCCAGAAGAAGGTCGGAATGATTGGATTTAGCTGCCAATGTGGAGGTTGTTTTTGCGGCAAACATAGGTATCCTGAAGAGCATTCGTGCGGCTTTGATCACAAGGAGGTTGGGCGCAAGATTTTGGCCAAGCAAATGGTTGAACGCAAGGCCGATAAATTGGAAGCTGAGTTCTCTGGCCTGGGCCGGTTCATACAGCAGATTTCATAA MADFESSKNGNDHALCANNCGFYGNPNNRNLCSVCYAAFLKETGAKYFERQKSSKSQINLETRQSSYFGVSENLETCDHNDPAPPKTQNRCEICQKKVGMIGFSCQCGGCFCGKHRYPEEHSCGFDHKEVGRKILAKQMVERKADKLEAEFSGLGRFIQQIS* Homology
BLAST of CsaV3_3G016380 vs. NCBI nr
Match: KGN57324.2 (hypothetical protein Csa_011271 [Cucumis sativus]) HSP 1 Score: 345.9 bits (886), Expect = 1.9e-91 Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0
BLAST of CsaV3_3G016380 vs. NCBI nr
Match: XP_031739037.1 (zinc finger A20 and AN1 domain-containing stress-associated protein 10-like [Cucumis sativus]) HSP 1 Score: 318.5 bits (815), Expect = 3.3e-83 Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0
BLAST of CsaV3_3G016380 vs. NCBI nr
Match: XP_031739041.1 (AN1-type zinc finger protein 6-like [Cucumis sativus]) HSP 1 Score: 297.4 bits (760), Expect = 7.8e-77 Identity = 139/148 (93.92%), Postives = 142/148 (95.95%), Query Frame = 0
BLAST of CsaV3_3G016380 vs. NCBI nr
Match: KAE8650437.1 (hypothetical protein Csa_010908 [Cucumis sativus]) HSP 1 Score: 286.6 bits (732), Expect = 1.4e-73 Identity = 134/143 (93.71%), Postives = 137/143 (95.80%), Query Frame = 0
BLAST of CsaV3_3G016380 vs. NCBI nr
Match: XP_031739286.1 (zinc finger A20 and AN1 domain-containing stress-associated protein 10-like [Cucumis sativus]) HSP 1 Score: 254.2 bits (648), Expect = 7.5e-64 Identity = 119/148 (80.41%), Postives = 127/148 (85.81%), Query Frame = 0
BLAST of CsaV3_3G016380 vs. ExPASy Swiss-Prot
Match: Q852K5 (Zinc finger A20 and AN1 domain-containing stress-associated protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=SAP6 PE=2 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 4.6e-24 Identity = 57/137 (41.61%), Postives = 80/137 (58.39%), Query Frame = 0
BLAST of CsaV3_3G016380 vs. ExPASy Swiss-Prot
Match: Q9SZ69 (Zinc finger A20 and AN1 domain-containing stress-associated protein 7 OS=Arabidopsis thaliana OX=3702 GN=SAP7 PE=1 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 3.9e-23 Identity = 60/158 (37.97%), Postives = 80/158 (50.63%), Query Frame = 0
BLAST of CsaV3_3G016380 vs. ExPASy Swiss-Prot
Match: O49663 (Zinc finger A20 and AN1 domain-containing stress-associated protein 9 OS=Arabidopsis thaliana OX=3702 GN=SAP9 PE=2 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 1.9e-22 Identity = 58/163 (35.58%), Postives = 80/163 (49.08%), Query Frame = 0
BLAST of CsaV3_3G016380 vs. ExPASy Swiss-Prot
Match: Q9STJ9 (Zinc finger A20 and AN1 domain-containing stress-associated protein 10 OS=Arabidopsis thaliana OX=3702 GN=SAP10 PE=1 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 3.3e-22 Identity = 61/137 (44.53%), Postives = 74/137 (54.01%), Query Frame = 0
BLAST of CsaV3_3G016380 vs. ExPASy Swiss-Prot
Match: Q7Y1W9 (Zinc finger A20 and AN1 domain-containing stress-associated protein 9 OS=Oryza sativa subsp. japonica OX=39947 GN=SAP9 PE=2 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 1.3e-21 Identity = 57/140 (40.71%), Postives = 73/140 (52.14%), Query Frame = 0
BLAST of CsaV3_3G016380 vs. ExPASy TrEMBL
Match: A0A0A0LB47 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G177400 PE=4 SV=1) HSP 1 Score: 318.5 bits (815), Expect = 1.6e-83 Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0
BLAST of CsaV3_3G016380 vs. ExPASy TrEMBL
Match: A0A0A0L9J1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G177900 PE=4 SV=1) HSP 1 Score: 254.2 bits (648), Expect = 3.6e-64 Identity = 119/148 (80.41%), Postives = 127/148 (85.81%), Query Frame = 0
BLAST of CsaV3_3G016380 vs. ExPASy TrEMBL
Match: A0A5A7SQW4 (Zinc finger A20 and AN1 domain-containing stress-associated protein 10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold239G00030 PE=4 SV=1) HSP 1 Score: 247.3 bits (630), Expect = 4.5e-62 Identity = 113/137 (82.48%), Postives = 125/137 (91.24%), Query Frame = 0
BLAST of CsaV3_3G016380 vs. ExPASy TrEMBL
Match: A0A1S3AZB4 (zinc finger A20 and AN1 domain-containing stress-associated protein 10-like OS=Cucumis melo OX=3656 GN=LOC103484207 PE=4 SV=1) HSP 1 Score: 247.3 bits (630), Expect = 4.5e-62 Identity = 113/137 (82.48%), Postives = 125/137 (91.24%), Query Frame = 0
BLAST of CsaV3_3G016380 vs. ExPASy TrEMBL
Match: A0A5D3E441 (Zinc finger A20 and AN1 domain-containing stress-associated protein 10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1044G00030 PE=4 SV=1) HSP 1 Score: 246.1 bits (627), Expect = 9.9e-62 Identity = 112/137 (81.75%), Postives = 125/137 (91.24%), Query Frame = 0
BLAST of CsaV3_3G016380 vs. TAIR 10
Match: AT4G12040.1 (A20/AN1-like zinc finger family protein ) HSP 1 Score: 109.4 bits (272), Expect = 2.8e-24 Identity = 60/158 (37.97%), Postives = 80/158 (50.63%), Query Frame = 0
BLAST of CsaV3_3G016380 vs. TAIR 10
Match: AT4G12040.2 (A20/AN1-like zinc finger family protein ) HSP 1 Score: 109.4 bits (272), Expect = 2.8e-24 Identity = 60/158 (37.97%), Postives = 80/158 (50.63%), Query Frame = 0
BLAST of CsaV3_3G016380 vs. TAIR 10
Match: AT4G22820.1 (A20/AN1-like zinc finger family protein ) HSP 1 Score: 107.1 bits (266), Expect = 1.4e-23 Identity = 58/163 (35.58%), Postives = 80/163 (49.08%), Query Frame = 0
BLAST of CsaV3_3G016380 vs. TAIR 10
Match: AT4G22820.2 (A20/AN1-like zinc finger family protein ) HSP 1 Score: 107.1 bits (266), Expect = 1.4e-23 Identity = 58/163 (35.58%), Postives = 80/163 (49.08%), Query Frame = 0
BLAST of CsaV3_3G016380 vs. TAIR 10
Match: AT4G25380.1 (stress-associated protein 10 ) HSP 1 Score: 106.3 bits (264), Expect = 2.4e-23 Identity = 61/137 (44.53%), Postives = 74/137 (54.01%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|