CsaV3_3G015260 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G015260
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr3: 11335498 .. 11336301 (+)
RNA-Seq ExpressionCsaV3_3G015260
SyntenyCsaV3_3G015260
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGGCAGAGGGGAGTGGGGCATGAGGCCACATGCAACCCAACCCCGGGCTTAGTGCCTAAAAAACTTTTCCACCACAACTACTGTGTGCCCGCTCACCTCGGTCAGCTTGGGCACCCACAATTAGCCAAACCGCTAAAAGTCAATTCCAAGTTTTGATGTTTAAAAACAAAAGAAAACCCATTCATTAATAACATTGATAATTATTAGTTATTATTATTGTAAGGAAAATGAAAATCAAAACTCTGCTCTTATCTTTTTAATTCTCTTTATAACATCTCTTCTCTCCCTTCCCGCTTTCTCTCCTCATTTCACAGTCGCCTCCTCTCAACAAACTCCGTTCCGTTCCCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTGCCACCGTTCCCTTCTCTATAATTCCGTTTCATTTCTCCCTTCTCTCGCCGTCACAGGTATCATTCATTTTCATTGGATTTTCGCTTTTTCTATTGCTCTTCTGTTCCTTTTGCGCTTCATTCTGATTGATTTTTGGTTATTCTACTGCTTTCTCTCTTCGGTTTTACTCTCTTGATGCTTTGATTCCACTGCTTCTTCTGCTCTGTTTGTTTATTCTTGTTTCCCTTGATTCGTTTTGTTTGATTAATTGTTGTTTTCGATGGAGTGGGATTTTGCTTTGTGTTCTTCTTCATTTGTTTTGTTGAATTGATGAATTTACGTTTCTTGTGCCTTTTTTTTTTTCTTTCCTTTTTTAAGGAGGATTGGATTTGATCTGTGAGGTGAAGAAGGCAGTCCGTACGGGATTCGTTGTGGAATAA

mRNA sequence

ATGTGGCAGAGGGGAGTGGGGCATGAGGCCACATGCAACCCAACCCCGGGCTTAGTGCCTAAAAAACTTTTCCACCACAACTACTGTGTGCCCGCTCACCTCGGTCAGCTTGGGCACCCACAATTAGCCAAACCGCTAAAATCGCCTCCTCTCAACAAACTCCGTTCCGTTCCCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTGCCACCGTTCCCTTCTCTATAATTCCGTTTCATTTCTCCCTTCTCTCGCCGTCACAGGAGGATTGGATTTGATCTGTGAGGTGAAGAAGGCAGTCCGTACGGGATTCGTTGTGGAATAA

Coding sequence (CDS)

ATGTGGCAGAGGGGAGTGGGGCATGAGGCCACATGCAACCCAACCCCGGGCTTAGTGCCTAAAAAACTTTTCCACCACAACTACTGTGTGCCCGCTCACCTCGGTCAGCTTGGGCACCCACAATTAGCCAAACCGCTAAAATCGCCTCCTCTCAACAAACTCCGTTCCGTTCCCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTGCCACCGTTCCCTTCTCTATAATTCCGTTTCATTTCTCCCTTCTCTCGCCGTCACAGGAGGATTGGATTTGATCTGTGAGGTGAAGAAGGCAGTCCGTACGGGATTCGTTGTGGAATAA

Protein sequence

MWQRGVGHEATCNPTPGLVPKKLFHHNYCVPAHLGQLGHPQLAKPLKSPPLNKLRSVPFSLSLSLSLSPCHRSLLYNSVSFLPSLAVTGGLDLICEVKKAVRTGFVVE*
Homology
[Close]
BLAST of CsaV3_3G015260 vs. NCBI nr
Match: KGN57176.1 (hypothetical protein Csa_010737 [Cucumis sativus])

HSP 1 Score: 227.3 bits (578), Expect = 6.6e-56
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0 

Query: 1   MWQRGVGHEATCNPTPGLVPKKLFHHNYCVPAHLGQLGHPQLAKPLKSPPLNKLRSVPFS 60
           MWQRGVGHEATCNPTPGLVPKKLFHHNYCVPAHLGQLGHPQLAKPLKSPPLNKLRSVPFS
Sbjct: 1   MWQRGVGHEATCNPTPGLVPKKLFHHNYCVPAHLGQLGHPQLAKPLKSPPLNKLRSVPFS 60

Query: 61  LSLSLSLSPCHRSLLYNSVSFLPSLAVTGGLDLICEVKKAVRTGFVVE 109
           LSLSLSLSPCHRSLLYNSVSFLPSLAVTGGLDLICEVKKAVRTGFVVE
Sbjct: 61  LSLSLSLSPCHRSLLYNSVSFLPSLAVTGGLDLICEVKKAVRTGFVVE 108

[Close]
BLAST of CsaV3_3G015260 vs. ExPASy TrEMBL
Match: A0A0A0LAR7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G168380 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 3.2e-56
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0 

Query: 1   MWQRGVGHEATCNPTPGLVPKKLFHHNYCVPAHLGQLGHPQLAKPLKSPPLNKLRSVPFS 60
           MWQRGVGHEATCNPTPGLVPKKLFHHNYCVPAHLGQLGHPQLAKPLKSPPLNKLRSVPFS
Sbjct: 1   MWQRGVGHEATCNPTPGLVPKKLFHHNYCVPAHLGQLGHPQLAKPLKSPPLNKLRSVPFS 60

Query: 61  LSLSLSLSPCHRSLLYNSVSFLPSLAVTGGLDLICEVKKAVRTGFVVE 109
           LSLSLSLSPCHRSLLYNSVSFLPSLAVTGGLDLICEVKKAVRTGFVVE
Sbjct: 61  LSLSLSLSPCHRSLLYNSVSFLPSLAVTGGLDLICEVKKAVRTGFVVE 108

The following BLAST results are available for this feature:
BLAST of CsaV3_3G015260 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN57176.16.6e-56100.00hypothetical protein Csa_010737 [Cucumis sativus][more]
BLAST of CsaV3_3G015260 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_3G015260 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LAR73.2e-56100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G168380 PE=4 SV=1[more]
BLAST of CsaV3_3G015260 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G015260.1CsaV3_3G015260.1mRNA