CsaV3_3G014820 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CTCTTTCCTTTTAAATCCTTCTATTTTCATTCTCCTCCACCACAACCCAACAACACACAACACACAACTCTAAAACATCCGCCACCCACCGCCTTGTACAAAACTTCACAAACAAAAAGGAAAATGAGACATGGTAGGACTCAGTGTAATCTTAGAAACTCGGAAATGCGACGTCGTCACTGAGTCATCTCGTCAAGTCATTGACAAAGCTACCCTTATCATGATTAACAACAACAACCACAACCACCGCCACCACTCTCTTTCTTCTTCCTCTTCTTCTTCTTCTAAATCTCCAAGATTTCTGGAGCGCTGCTTTCTGTGCGCCCAGAAGTTTCTCCCCGGAAAAGACATCTATATGTACCAGTAAGTAGTTAGTATTTAACCTTTTTTTTTTCTTTTTATTAAAAAATAGTTATTTATATACATGTACATATACACAGAGGGGACAAGGGCTTCTGCAGTGAAGACTGCAGATGCCGGCAGATTTTCATGGACGAAGAAGAAACAATGGTAGATGCCGGAAACTGCTCGTTCGCCGCCGCCATTAACCCACAAACCACCGCTACTTCTCCCTCTCCTCCACCTTCTCGCCTGCCTAAACCCACCAAAAACCACTCCACAGGTTTTGCTTACTGAGCCTCGTCAAACCATAAATCGTCTTTCTTTTCTGTAATTTTCAGCTGTGAATTTATCTCGGTTTCTTTTTCTTCTTCTTGTTTTTTTTTTTTTTTTTTGGGTGGGTGTGATCTCTGAATATGAAACTAAGGAGAAGAAGAATGTTCCTTTTTTCAAAAAAAAAAAAAGAAGATTTAATTAGCAAAAAGACTTCTATAGATATATTAAGACAAAAGGTGGATATTGTATTAATGGATTTTCCCCTTTTTTGTGTGTGGAAAAGAAATGAGTTCTGTTTTCTTATTCTTTTTTGTCAAGCATTGATGTATAACTAAATATAAGAAAGCATAGGGAAAGTTATGTTTGTTTTTGGAAATTAATCACATCGTATATTATATTAAATCTAACACTAATTTAATATAATATTATCCGTCACCCTCAAATATTTTTTTTTGTAGAGAGCATGTTTAAGGAGATGTCTCATGCCCTTAGTTACATTCTTGTTTCCAACCTCCTAATTAATATTAATCTTTACTTGTTTTATCTTACTGATAAAAAGGATGGAATTGTTTGACCCAAAAGTTGGACTATTTTAATAAAACTAAAATTAGAAGACTTAACTTTAGATTAGAACTCATCAATGGAGCTCTAA ATGGTAGGACTCAGTGTAATCTTAGAAACTCGGAAATGCGACGTCGTCACTGAGTCATCTCGTCAAGTCATTGACAAAGCTACCCTTATCATGATTAACAACAACAACCACAACCACCGCCACCACTCTCTTTCTTCTTCCTCTTCTTCTTCTTCTAAATCTCCAAGATTTCTGGAGCGCTGCTTTCTGTGCGCCCAGAAGTTTCTCCCCGGAAAAGACATCTATATGTACCAAGGGGACAAGGGCTTCTGCAGTGAAGACTGCAGATGCCGGCAGATTTTCATGGACGAAGAAGAAACAATGGTAGATGCCGGAAACTGCTCGTTCGCCGCCGCCATTAACCCACAAACCACCGCTACTTCTCCCTCTCCTCCACCTTCTCGCCTGCCTAAACCCACCAAAAACCACTCCACAGGTTTTGCTTACTGA ATGGTAGGACTCAGTGTAATCTTAGAAACTCGGAAATGCGACGTCGTCACTGAGTCATCTCGTCAAGTCATTGACAAAGCTACCCTTATCATGATTAACAACAACAACCACAACCACCGCCACCACTCTCTTTCTTCTTCCTCTTCTTCTTCTTCTAAATCTCCAAGATTTCTGGAGCGCTGCTTTCTGTGCGCCCAGAAGTTTCTCCCCGGAAAAGACATCTATATGTACCAAGGGGACAAGGGCTTCTGCAGTGAAGACTGCAGATGCCGGCAGATTTTCATGGACGAAGAAGAAACAATGGTAGATGCCGGAAACTGCTCGTTCGCCGCCGCCATTAACCCACAAACCACCGCTACTTCTCCCTCTCCTCCACCTTCTCGCCTGCCTAAACCCACCAAAAACCACTCCACAGGTTTTGCTTACTGA MVGLSVILETRKCDVVTESSRQVIDKATLIMINNNNHNHRHHSLSSSSSSSSKSPRFLERCFLCAQKFLPGKDIYMYQGDKGFCSEDCRCRQIFMDEEETMVDAGNCSFAAAINPQTTATSPSPPPSRLPKPTKNHSTGFAY* Homology
BLAST of CsaV3_3G014820 vs. NCBI nr
Match: XP_004134222.1 (FCS-Like Zinc finger 15 [Cucumis sativus] >KGN57127.1 hypothetical protein Csa_009915 [Cucumis sativus]) HSP 1 Score: 287.3 bits (734), Expect = 7.0e-74 Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0
BLAST of CsaV3_3G014820 vs. NCBI nr
Match: XP_008438900.1 (PREDICTED: uncharacterized protein LOC103483860 [Cucumis melo] >KAA0049509.1 senescence-associated family protein [Cucumis melo var. makuwa] >TYK16189.1 senescence-associated family protein [Cucumis melo var. makuwa]) HSP 1 Score: 257.3 bits (656), Expect = 7.8e-65 Identity = 128/143 (89.51%), Postives = 136/143 (95.10%), Query Frame = 0
BLAST of CsaV3_3G014820 vs. NCBI nr
Match: XP_038882229.1 (FCS-Like Zinc finger 15-like [Benincasa hispida]) HSP 1 Score: 232.6 bits (592), Expect = 2.1e-57 Identity = 117/143 (81.82%), Postives = 127/143 (88.81%), Query Frame = 0
BLAST of CsaV3_3G014820 vs. NCBI nr
Match: XP_022973720.1 (uncharacterized protein LOC111472297 isoform X1 [Cucurbita maxima]) HSP 1 Score: 194.1 bits (492), Expect = 8.1e-46 Identity = 101/148 (68.24%), Postives = 121/148 (81.76%), Query Frame = 0
BLAST of CsaV3_3G014820 vs. NCBI nr
Match: XP_022943356.1 (uncharacterized protein LOC111448140 isoform X1 [Cucurbita moschata]) HSP 1 Score: 191.4 bits (485), Expect = 5.3e-45 Identity = 99/147 (67.35%), Postives = 118/147 (80.27%), Query Frame = 0
BLAST of CsaV3_3G014820 vs. ExPASy Swiss-Prot
Match: Q9FH22 (FCS-Like Zinc finger 15 OS=Arabidopsis thaliana OX=3702 GN=FLZ15 PE=1 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 2.5e-13 Identity = 57/170 (33.53%), Postives = 82/170 (48.24%), Query Frame = 0
BLAST of CsaV3_3G014820 vs. ExPASy Swiss-Prot
Match: Q8VZM9 (FCS-Like Zinc finger 2 OS=Arabidopsis thaliana OX=3702 GN=FLZ2 PE=1 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 2.2e-09 Identity = 39/106 (36.79%), Postives = 53/106 (50.00%), Query Frame = 0
BLAST of CsaV3_3G014820 vs. ExPASy Swiss-Prot
Match: Q9SGZ8 (FCS-Like Zinc finger 6 OS=Arabidopsis thaliana OX=3702 GN=FLZ6 PE=1 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 1.1e-08 Identity = 39/108 (36.11%), Postives = 56/108 (51.85%), Query Frame = 0
BLAST of CsaV3_3G014820 vs. ExPASy Swiss-Prot
Match: Q8VY80 (FCS-Like Zinc finger 5 OS=Arabidopsis thaliana OX=3702 GN=FLZ5 PE=1 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 9.1e-08 Identity = 30/79 (37.97%), Postives = 46/79 (58.23%), Query Frame = 0
BLAST of CsaV3_3G014820 vs. ExPASy Swiss-Prot
Match: Q8LGS1 (Protein MARD1 OS=Arabidopsis thaliana OX=3702 GN=MARD1 PE=1 SV=2) HSP 1 Score: 54.7 bits (130), Expect = 1.0e-06 Identity = 22/57 (38.60%), Postives = 36/57 (63.16%), Query Frame = 0
BLAST of CsaV3_3G014820 vs. ExPASy TrEMBL
Match: A0A0A0L925 (FLZ-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G164460 PE=3 SV=1) HSP 1 Score: 287.3 bits (734), Expect = 3.4e-74 Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0
BLAST of CsaV3_3G014820 vs. ExPASy TrEMBL
Match: A0A5D3D154 (Senescence-associated family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G001170 PE=3 SV=1) HSP 1 Score: 257.3 bits (656), Expect = 3.8e-65 Identity = 128/143 (89.51%), Postives = 136/143 (95.10%), Query Frame = 0
BLAST of CsaV3_3G014820 vs. ExPASy TrEMBL
Match: A0A1S3AY62 (uncharacterized protein LOC103483860 OS=Cucumis melo OX=3656 GN=LOC103483860 PE=3 SV=1) HSP 1 Score: 257.3 bits (656), Expect = 3.8e-65 Identity = 128/143 (89.51%), Postives = 136/143 (95.10%), Query Frame = 0
BLAST of CsaV3_3G014820 vs. ExPASy TrEMBL
Match: A0A6J1IC26 (uncharacterized protein LOC111472297 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111472297 PE=3 SV=1) HSP 1 Score: 194.1 bits (492), Expect = 3.9e-46 Identity = 101/148 (68.24%), Postives = 121/148 (81.76%), Query Frame = 0
BLAST of CsaV3_3G014820 vs. ExPASy TrEMBL
Match: A0A6J1FRH3 (uncharacterized protein LOC111448140 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448140 PE=3 SV=1) HSP 1 Score: 191.4 bits (485), Expect = 2.5e-45 Identity = 99/147 (67.35%), Postives = 118/147 (80.27%), Query Frame = 0
BLAST of CsaV3_3G014820 vs. TAIR 10
Match: AT5G49120.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 76.6 bits (187), Expect = 1.8e-14 Identity = 57/170 (33.53%), Postives = 82/170 (48.24%), Query Frame = 0
BLAST of CsaV3_3G014820 vs. TAIR 10
Match: AT4G17670.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 63.5 bits (153), Expect = 1.5e-10 Identity = 39/106 (36.79%), Postives = 53/106 (50.00%), Query Frame = 0
BLAST of CsaV3_3G014820 vs. TAIR 10
Match: AT1G78020.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 61.2 bits (147), Expect = 7.6e-10 Identity = 39/108 (36.11%), Postives = 56/108 (51.85%), Query Frame = 0
BLAST of CsaV3_3G014820 vs. TAIR 10
Match: AT1G22160.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 58.2 bits (139), Expect = 6.5e-09 Identity = 30/79 (37.97%), Postives = 46/79 (58.23%), Query Frame = 0
BLAST of CsaV3_3G014820 vs. TAIR 10
Match: AT3G63210.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 54.7 bits (130), Expect = 7.2e-08 Identity = 22/57 (38.60%), Postives = 36/57 (63.16%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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