CsaV3_3G014710 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G014710
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr3: 10937678 .. 10937926 (+)
RNA-Seq ExpressionCsaV3_3G014710
SyntenyCsaV3_3G014710
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTAGTGCTTTTGATGTTAAACCATCTTTCAAGCCCCGGAGACTGCCAAGACGCCGATCAACATTCCGATTCCGCCGCACGAAGAAACCTCTTGACAGTTGCGAACGATGCGGCCATTCTTTCACCAGAAGCACTTGCCATCTTCGGCCGATTTCTTCGCCATTGAATGTCTACGCTCTTCTTCCATCCCAATCTTCCTTCTCACCCTCAGATTGCCTTAAAAAATTTCTCTGCATTGGAGTGTGA

mRNA sequence

ATGATTAGTGCTTTTGATGTTAAACCATCTTTCAAGCCCCGGAGACTGCCAAGACGCCGATCAACATTCCGATTCCGCCGCACGAAGAAACCTCTTGACAGTTGCGAACGATGCGGCCATTCTTTCACCAGAAGCACTTGCCATCTTCGGCCGATTTCTTCGCCATTGAATGTCTACGCTCTTCTTCCATCCCAATCTTCCTTCTCACCCTCAGATTGCCTTAAAAAATTTCTCTGCATTGGAGTGTGA

Coding sequence (CDS)

ATGATTAGTGCTTTTGATGTTAAACCATCTTTCAAGCCCCGGAGACTGCCAAGACGCCGATCAACATTCCGATTCCGCCGCACGAAGAAACCTCTTGACAGTTGCGAACGATGCGGCCATTCTTTCACCAGAAGCACTTGCCATCTTCGGCCGATTTCTTCGCCATTGAATGTCTACGCTCTTCTTCCATCCCAATCTTCCTTCTCACCCTCAGATTGCCTTAAAAAATTTCTCTGCATTGGAGTGTGA

Protein sequence

MISAFDVKPSFKPRRLPRRRSTFRFRRTKKPLDSCERCGHSFTRSTCHLRPISSPLNVYALLPSQSSFSPSDCLKKFLCIGV*
Homology
[Close]
BLAST of CsaV3_3G014710 vs. NCBI nr
Match: KGN57115.1 (hypothetical protein Csa_010660 [Cucumis sativus])

HSP 1 Score: 171.8 bits (434), Expect = 2.5e-39
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0 

Query: 1  MISAFDVKPSFKPRRLPRRRSTFRFRRTKKPLDSCERCGHSFTRSTCHLRPISSPLNVYA 60
          MISAFDVKPSFKPRRLPRRRSTFRFRRTKKPLDSCERCGHSFTRSTCHLRPISSPLNVYA
Sbjct: 1  MISAFDVKPSFKPRRLPRRRSTFRFRRTKKPLDSCERCGHSFTRSTCHLRPISSPLNVYA 60

Query: 61 LLPSQSSFSPSDCLKKFLCIGV 83
          LLPSQSSFSPSDCLKKFLCIGV
Sbjct: 61 LLPSQSSFSPSDCLKKFLCIGV 82

[Close]
BLAST of CsaV3_3G014710 vs. NCBI nr
Match: XP_008438888.1 (PREDICTED: uncharacterized protein LOC103483847 isoform X1 [Cucumis melo])

HSP 1 Score: 68.6 bits (166), Expect = 3.0e-08
Identity = 32/37 (86.49%), Postives = 33/37 (89.19%), Query Frame = 0 

Query: 22 TFRFRRTKKPLDSCERCGHSFTRSTCHLRPISSPLNV 59
          TFRFRRTKKPLDSCERCG S TRS+ HLRPIS PLNV
Sbjct: 5  TFRFRRTKKPLDSCERCGRSSTRSSSHLRPISPPLNV 41

[Close]
BLAST of CsaV3_3G014710 vs. ExPASy TrEMBL
Match: A0A0A0L591 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G154375 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 1.2e-39
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0 

Query: 1  MISAFDVKPSFKPRRLPRRRSTFRFRRTKKPLDSCERCGHSFTRSTCHLRPISSPLNVYA 60
          MISAFDVKPSFKPRRLPRRRSTFRFRRTKKPLDSCERCGHSFTRSTCHLRPISSPLNVYA
Sbjct: 1  MISAFDVKPSFKPRRLPRRRSTFRFRRTKKPLDSCERCGHSFTRSTCHLRPISSPLNVYA 60

Query: 61 LLPSQSSFSPSDCLKKFLCIGV 83
          LLPSQSSFSPSDCLKKFLCIGV
Sbjct: 61 LLPSQSSFSPSDCLKKFLCIGV 82

[Close]
BLAST of CsaV3_3G014710 vs. ExPASy TrEMBL
Match: A0A1S3AXJ3 (uncharacterized protein LOC103483847 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483847 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.4e-08
Identity = 32/37 (86.49%), Postives = 33/37 (89.19%), Query Frame = 0 

Query: 22 TFRFRRTKKPLDSCERCGHSFTRSTCHLRPISSPLNV 59
          TFRFRRTKKPLDSCERCG S TRS+ HLRPIS PLNV
Sbjct: 5  TFRFRRTKKPLDSCERCGRSSTRSSSHLRPISPPLNV 41

The following BLAST results are available for this feature:
BLAST of CsaV3_3G014710 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN57115.12.5e-39100.00hypothetical protein Csa_010660 [Cucumis sativus][more]
XP_008438888.13.0e-0886.49PREDICTED: uncharacterized protein LOC103483847 isoform X1 [Cucumis melo][more]
BLAST of CsaV3_3G014710 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_3G014710 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L5911.2e-39100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G154375 PE=4 SV=1[more]
A0A1S3AXJ31.4e-0886.49uncharacterized protein LOC103483847 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
BLAST of CsaV3_3G014710 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G014710.1CsaV3_3G014710.1mRNA