CsaV3_3G013780 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G013780
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr3: 10342524 .. 10342865 (+)
RNA-Seq ExpressionCsaV3_3G013780
SyntenyCsaV3_3G013780
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTAAAAAAACACAATATAAAGTTTGAGAGACATTTTTCTATAATTTTAGTTTACAATATTTGGAAGAGTTTCCACTTTCCAGAAGAGAGATACATAAAAAGGAGTGAAAAGACCAAAAACTCCAATAACAAGAAGGTTTTAATACACACGGTCACGGTGGGTGAGGGGGTGGGGTGGGGTAAGTGGGGTCATACTTCTCAAAATCACCCAATCATAGAGGGCCAACCAAAGAGGTGCATTGAAGCTGACGTAGCTGCACCACACACAATTCTCCAATTTCTTTTTCTCCTTTTTCATTTTTTTCCTTTTAAAGAAAAAAAATGTTATTTTAATAATTAA

mRNA sequence

ATGTTAAAAAAACACAATATAAAGTTTGAGAGACATTTTTCTATAATTTTAGTTTACAATATTTGGAAGAGTTTCCACTTTCCAGAAGAGAGATACATAAAAAGGAGTGAAAAGACCAAAAACTCCAATAACAAGAAGGTTTTAATACACACGGTCACGGTGGGTGAGGGGGTGGGGTGGGGTAAGTGGGGTCATACTTCTCAAAATCACCCAATCATAGAGGGCCAACCAAAGAGGTGCATTGAAGCTGACGTAGCTGCACCACACACAATTCTCCAATTTCTTTTTCTCCTTTTTCATTTTTTTCCTTTTAAAGAAAAAAAATGTTATTTTAATAATTAA

Coding sequence (CDS)

ATGTTAAAAAAACACAATATAAAGTTTGAGAGACATTTTTCTATAATTTTAGTTTACAATATTTGGAAGAGTTTCCACTTTCCAGAAGAGAGATACATAAAAAGGAGTGAAAAGACCAAAAACTCCAATAACAAGAAGGTTTTAATACACACGGTCACGGTGGGTGAGGGGGTGGGGTGGGGTAAGTGGGGTCATACTTCTCAAAATCACCCAATCATAGAGGGCCAACCAAAGAGGTGCATTGAAGCTGACGTAGCTGCACCACACACAATTCTCCAATTTCTTTTTCTCCTTTTTCATTTTTTTCCTTTTAAAGAAAAAAAATGTTATTTTAATAATTAA

Protein sequence

MLKKHNIKFERHFSIILVYNIWKSFHFPEERYIKRSEKTKNSNNKKVLIHTVTVGEGVGWGKWGHTSQNHPIIEGQPKRCIEADVAAPHTILQFLFLLFHFFPFKEKKCYFNN*
Homology
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BLAST of CsaV3_3G013780 vs. NCBI nr
Match: KGN57060.2 (hypothetical protein Csa_009635 [Cucumis sativus])

HSP 1 Score: 244.2 bits (622), Expect = 5.4e-61
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0 

Query: 1   MLKKHNIKFERHFSIILVYNIWKSFHFPEERYIKRSEKTKNSNNKKVLIHTVTVGEGVGW 60
           MLKKHNIKFERHFSIILVYNIWKSFHFPEERYIKRSEKTKNSNNKKVLIHTVTVGEGVGW
Sbjct: 1   MLKKHNIKFERHFSIILVYNIWKSFHFPEERYIKRSEKTKNSNNKKVLIHTVTVGEGVGW 60

Query: 61  GKWGHTSQNHPIIEGQPKRCIEADVAAPHTILQFLFLLFHFFPFKEKKCYFNN 114
           GKWGHTSQNHPIIEGQPKRCIEADVAAPHTILQFLFLLFHFFPFKEKKCYFNN
Sbjct: 61  GKWGHTSQNHPIIEGQPKRCIEADVAAPHTILQFLFLLFHFFPFKEKKCYFNN 113

The following BLAST results are available for this feature:
BLAST of CsaV3_3G013780 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN57060.25.4e-61100.00hypothetical protein Csa_009635 [Cucumis sativus][more]
BLAST of CsaV3_3G013780 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_3G013780 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_3G013780 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G013780.1CsaV3_3G013780.1mRNA