CsaV3_3G013650 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G013650
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr3: 10278487 .. 10278678 (+)
RNA-Seq ExpressionCsaV3_3G013650
SyntenyCsaV3_3G013650
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTTGTTCACACTCTTATGGCTTTCGTCAACTACAGTTTATAAATACATTTGCGTTGGGCATGGGCATGGGCATGGGCATGGGCATGGGCATGGGCATGGGCATGGCAAAACACATCCGTGATGGGGTATCCCCAAAGCCCATCTGGGCTTGGGTTTCCTTGGGCCCAAGTGCTGGTGTACTTAATTAA

mRNA sequence

ATGTTTTGTTCACACTCTTATGGCTTTCGTCAACTACAGTTTATAAATACATTTGCGTTGGGCATGGGCATGGGCATGGGCATGGGCATGGGCATGGGCATGGGCATGGCAAAACACATCCGTGATGGGGTATCCCCAAAGCCCATCTGGGCTTGGGTTTCCTTGGGCCCAAGTGCTGGTGTACTTAATTAA

Coding sequence (CDS)

ATGTTTTGTTCACACTCTTATGGCTTTCGTCAACTACAGTTTATAAATACATTTGCGTTGGGCATGGGCATGGGCATGGGCATGGGCATGGGCATGGGCATGGGCATGGCAAAACACATCCGTGATGGGGTATCCCCAAAGCCCATCTGGGCTTGGGTTTCCTTGGGCCCAAGTGCTGGTGTACTTAATTAA

Protein sequence

MFCSHSYGFRQLQFINTFALGMGMGMGMGMGMGMGMAKHIRDGVSPKPIWAWVSLGPSAGVLN*
Homology
[Close]
BLAST of CsaV3_3G013650 vs. NCBI nr
Match: KAE8650363.1 (hypothetical protein Csa_010058 [Cucumis sativus])

HSP 1 Score: 136.0 bits (341), Expect = 1.2e-28
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0 

Query: 1  MFCSHSYGFRQLQFINTFALGMGMGMGMGMGMGMGMAKHIRDGVSPKPIWAWVSLGPSAG 60
          MFCSHSYGFRQLQFINTFALGMGMGMGMGMGMGMGMAKHIRDGVSPKPIWAWVSLGPSAG
Sbjct: 1  MFCSHSYGFRQLQFINTFALGMGMGMGMGMGMGMGMAKHIRDGVSPKPIWAWVSLGPSAG 60

Query: 61 VLN 64
          VLN
Sbjct: 61 VLN 63

[Close]
BLAST of CsaV3_3G013650 vs. ExPASy TrEMBL
Match: A0A0A0L8U5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G149970 PE=4 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.4e-22
Identity = 63/107 (58.88%), Postives = 63/107 (58.88%), Query Frame = 0 

Query: 1   MFCSHSYGFRQLQFINTFAL---------------------------------------- 60
           MFCSHSYGFRQLQFINTFAL                                        
Sbjct: 1   MFCSHSYGFRQLQFINTFALGMGMGMGMGMGMGMGMGMGMGMGMGMGMGMGMGMGMGMGM 60

Query: 61  ----GMGMGMGMGMGMGMGMAKHIRDGVSPKPIWAWVSLGPSAGVLN 64
               GMGMGMGMGMGMGMGMAKHIRDGVSPKPIWAWVSLGPSAGVLN
Sbjct: 61  GMGMGMGMGMGMGMGMGMGMAKHIRDGVSPKPIWAWVSLGPSAGVLN 107

The following BLAST results are available for this feature:
BLAST of CsaV3_3G013650 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8650363.11.2e-28100.00hypothetical protein Csa_010058 [Cucumis sativus][more]
BLAST of CsaV3_3G013650 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_3G013650 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L8U51.4e-2258.88Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G149970 PE=4 SV=1[more]
BLAST of CsaV3_3G013650 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G013650.1CsaV3_3G013650.1mRNA