CsaV3_3G013350 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G013350
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr3: 10094177 .. 10094537 (+)
RNA-Seq ExpressionCsaV3_3G013350
SyntenyCsaV3_3G013350
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCATCTAACTTTAGTTTTAAGACTGTTGGCGTCCTCTTAGTATTCTGTTTACCTCACTGGATGCTAGGAAAGCTGTATGGGATAGGGAAAGTCTTGTTGACTGCACTGAACACTCGATGCATTGCACGTGCACCAAGGATCCATAGTACATCTGATGTTCTATCTTATATTGAAGTATGGTACGAAACATTATGGAAACAAGTGTTACTGAAAACTTTCTGTTATATTCTTTGCAGGTTTAGGCATTCTATTAGATGGTAAAAATTCGAGCAGAGCCGTTTCTAGTTTAATATCCTTTGCAGTTTGCATCGTGGAGAGAGCAGTTCTTCATATCATGGAAAATATAAATCCGGTCTGA

mRNA sequence

ATGGCATCTAACTTTAGTTTTAAGACTGTTGGCGTCCTCTTAGTATTCTGTTTACCTCACTGGATGCTAGGAAAGCTGTATGGGATAGGGAAAGTCTTGTTGACTGCACTGAACACTCGATGCATTGCACGTGCACCAAGGATCCATAGTTTAGGCATTCTATTAGATGGTAAAAATTCGAGCAGAGCCGTTTCTAGTTTAATATCCTTTGCAGTTTGCATCGTGGAGAGAGCAGTTCTTCATATCATGGAAAATATAAATCCGGTCTGA

Coding sequence (CDS)

ATGGCATCTAACTTTAGTTTTAAGACTGTTGGCGTCCTCTTAGTATTCTGTTTACCTCACTGGATGCTAGGAAAGCTGTATGGGATAGGGAAAGTCTTGTTGACTGCACTGAACACTCGATGCATTGCACGTGCACCAAGGATCCATAGTTTAGGCATTCTATTAGATGGTAAAAATTCGAGCAGAGCCGTTTCTAGTTTAATATCCTTTGCAGTTTGCATCGTGGAGAGAGCAGTTCTTCATATCATGGAAAATATAAATCCGGTCTGA

Protein sequence

MASNFSFKTVGVLLVFCLPHWMLGKLYGIGKVLLTALNTRCIARAPRIHSLGILLDGKNSSRAVSSLISFAVCIVERAVLHIMENINPV*
Homology
[Close]
BLAST of CsaV3_3G013350 vs. NCBI nr
Match: KGN56988.1 (hypothetical protein Csa_011779 [Cucumis sativus])

HSP 1 Score: 177.2 bits (448), Expect = 6.5e-41
Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0 

Query: 1  MASNFSFKTVGVLLVFCLPHWMLGKLYGIGKVLLTALNTRCIARAPRIHSLGILLDGKNS 60
          MASNFSFKTVGVLLVFCLPHWMLGKLYGIGKVLLTALNTRCIARAPRIHSLGILLDGKNS
Sbjct: 1  MASNFSFKTVGVLLVFCLPHWMLGKLYGIGKVLLTALNTRCIARAPRIHSLGILLDGKNS 60

Query: 61 SRAVSSLISFAVCIVERAVLHIMENINPV 90
          SRAVSSLISFAVCIVERAVLHIMENINPV
Sbjct: 61 SRAVSSLISFAVCIVERAVLHIMENINPV 89

[Close]
BLAST of CsaV3_3G013350 vs. ExPASy TrEMBL
Match: A0A0A0L5J5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G147220 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 3.1e-41
Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0 

Query: 1  MASNFSFKTVGVLLVFCLPHWMLGKLYGIGKVLLTALNTRCIARAPRIHSLGILLDGKNS 60
          MASNFSFKTVGVLLVFCLPHWMLGKLYGIGKVLLTALNTRCIARAPRIHSLGILLDGKNS
Sbjct: 1  MASNFSFKTVGVLLVFCLPHWMLGKLYGIGKVLLTALNTRCIARAPRIHSLGILLDGKNS 60

Query: 61 SRAVSSLISFAVCIVERAVLHIMENINPV 90
          SRAVSSLISFAVCIVERAVLHIMENINPV
Sbjct: 61 SRAVSSLISFAVCIVERAVLHIMENINPV 89

The following BLAST results are available for this feature:
BLAST of CsaV3_3G013350 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN56988.16.5e-41100.00hypothetical protein Csa_011779 [Cucumis sativus][more]
BLAST of CsaV3_3G013350 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_3G013350 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L5J53.1e-41100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G147220 PE=4 SV=1[more]
BLAST of CsaV3_3G013350 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G013350.1CsaV3_3G013350.1mRNA