CsaV3_3G013330 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G013330
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr3: 10084392 .. 10084709 (+)
RNA-Seq ExpressionCsaV3_3G013330
SyntenyCsaV3_3G013330
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATTTAGACAATGTGGGCTGCCAATATGGCGTCCGAGATAGATCTCAGTCTAGAAATGATTTTGAGACCTGTCACATAAACTTGCGCAGTCGTGGTGTTTGGCCACCTACACTTCGGAGCTCATTTTGTCAGTGTAGCTCATTTTGTCATACTTATCAGTTCAATTGTCTCCTTTGCTTGATTCGTTCGGCTATTCGGAGGCTTGGTTTAAGTCAGAGAACGAACAGCGTGCTCCAATGGGTTTCAAGACATGCGTCTTCCGGTGGTTTAGGTCATGTGGCAAGCTATATGAGTATGGCGATGCCAATAACATAA

mRNA sequence

ATGAATTTAGACAATGTGGGCTGCCAATATGGCGTCCGAGATAGATCTCAGTCTAGAAATGATTTTGAGACCTGTCACATAAACTTGCGCAGTCGTGGTGTTTGGCCACCTACACTTCGGAGCTCATTTTGTCAGTGTAGCTCATTTTGTCATACTTATCAGTTCAATTGTCTCCTTTGCTTGATTCGTTCGGCTATTCGGAGGCTTGGTTTAAGTCAGAGAACGAACAGCGTGCTCCAATGGGTTTCAAGACATGCGTCTTCCGGTGGTTTAGGTCATGTGGCAAGCTATATGAGTATGGCGATGCCAATAACATAA

Coding sequence (CDS)

ATGAATTTAGACAATGTGGGCTGCCAATATGGCGTCCGAGATAGATCTCAGTCTAGAAATGATTTTGAGACCTGTCACATAAACTTGCGCAGTCGTGGTGTTTGGCCACCTACACTTCGGAGCTCATTTTGTCAGTGTAGCTCATTTTGTCATACTTATCAGTTCAATTGTCTCCTTTGCTTGATTCGTTCGGCTATTCGGAGGCTTGGTTTAAGTCAGAGAACGAACAGCGTGCTCCAATGGGTTTCAAGACATGCGTCTTCCGGTGGTTTAGGTCATGTGGCAAGCTATATGAGTATGGCGATGCCAATAACATAA

Protein sequence

MNLDNVGCQYGVRDRSQSRNDFETCHINLRSRGVWPPTLRSSFCQCSSFCHTYQFNCLLCLIRSAIRRLGLSQRTNSVLQWVSRHASSGGLGHVASYMSMAMPIT*
Homology
[Close]
BLAST of CsaV3_3G013330 vs. NCBI nr
Match: KGN56986.1 (hypothetical protein Csa_010132 [Cucumis sativus])

HSP 1 Score: 224.2 bits (570), Expect = 5.4e-55
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0 

Query: 1   MNLDNVGCQYGVRDRSQSRNDFETCHINLRSRGVWPPTLRSSFCQCSSFCHTYQFNCLLC 60
           MNLDNVGCQYGVRDRSQSRNDFETCHINLRSRGVWPPTLRSSFCQCSSFCHTYQFNCLLC
Sbjct: 1   MNLDNVGCQYGVRDRSQSRNDFETCHINLRSRGVWPPTLRSSFCQCSSFCHTYQFNCLLC 60

Query: 61  LIRSAIRRLGLSQRTNSVLQWVSRHASSGGLGHVASYMSMAMPIT 106
           LIRSAIRRLGLSQRTNSVLQWVSRHASSGGLGHVASYMSMAMPIT
Sbjct: 61  LIRSAIRRLGLSQRTNSVLQWVSRHASSGGLGHVASYMSMAMPIT 105

[Close]
BLAST of CsaV3_3G013330 vs. ExPASy TrEMBL
Match: A0A0A0LAA4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G146710 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 2.6e-55
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0 

Query: 1   MNLDNVGCQYGVRDRSQSRNDFETCHINLRSRGVWPPTLRSSFCQCSSFCHTYQFNCLLC 60
           MNLDNVGCQYGVRDRSQSRNDFETCHINLRSRGVWPPTLRSSFCQCSSFCHTYQFNCLLC
Sbjct: 1   MNLDNVGCQYGVRDRSQSRNDFETCHINLRSRGVWPPTLRSSFCQCSSFCHTYQFNCLLC 60

Query: 61  LIRSAIRRLGLSQRTNSVLQWVSRHASSGGLGHVASYMSMAMPIT 106
           LIRSAIRRLGLSQRTNSVLQWVSRHASSGGLGHVASYMSMAMPIT
Sbjct: 61  LIRSAIRRLGLSQRTNSVLQWVSRHASSGGLGHVASYMSMAMPIT 105

The following BLAST results are available for this feature:
BLAST of CsaV3_3G013330 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN56986.15.4e-55100.00hypothetical protein Csa_010132 [Cucumis sativus][more]
BLAST of CsaV3_3G013330 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_3G013330 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LAA42.6e-55100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G146710 PE=4 SV=1[more]
BLAST of CsaV3_3G013330 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G013330.1CsaV3_3G013330.1mRNA