CsaV3_3G013310 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G013310
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr3: 10082305 .. 10082764 (+)
RNA-Seq ExpressionCsaV3_3G013310
SyntenyCsaV3_3G013310
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGATATCTGAGGCTTGGATGAGTCGTTTGCAATGGTCTCCAATGACCTATCCTTTCATTCTCACTTCCAAGGCTTACCTTAGGCAATGCTTTTGTGCAAAAGCTGCAGGACTCGAACAAATTGAGGGGCTAGTAAAAGCAAACCATCTTCCCAAGAACATGAAGCCACATAAAATCTAAGAAGTATTTATATGCCTAGGTTAAGAAAAACAACACAACCTGTAACGAATGGATCAACTCATTGAAGCATAGCATCAAACAGATGGTCTGCATTAAACGAATGAATCGAAAGGCATTGCAAAACCTATTTTCAGTCGGAGCCGCAAGCTGCAAGCAAAACATGAACATGTTTCCCAAAAATAGGAAAGAAAATAAACCATACTTGATTGATGCTGTAATGTCCTAGGATTCAGAATCTGGATTTGGTCTCCTACCCTTTCGAGGGTACTCAACCTAA

mRNA sequence

ATGGGGATATCTGAGGCTTGGATGAGTCGTTTGCAATGGTCTCCAATGACCTATCCTTTCATTCTCACTTCCAAGGCTTACCTTAGGCAATGCTTTTGTGCAAAAGCTGCAGGACTCGAACAAATTGAGGGGCTAGATTCAGAATCTGGATTTGGTCTCCTACCCTTTCGAGGGTACTCAACCTAA

Coding sequence (CDS)

ATGGGGATATCTGAGGCTTGGATGAGTCGTTTGCAATGGTCTCCAATGACCTATCCTTTCATTCTCACTTCCAAGGCTTACCTTAGGCAATGCTTTTGTGCAAAAGCTGCAGGACTCGAACAAATTGAGGGGCTAGATTCAGAATCTGGATTTGGTCTCCTACCCTTTCGAGGGTACTCAACCTAA

Protein sequence

MGISEAWMSRLQWSPMTYPFILTSKAYLRQCFCAKAAGLEQIEGLDSESGFGLLPFRGYST*
Homology
[Close]
BLAST of CsaV3_3G013310 vs. NCBI nr
Match: KGN56984.1 (hypothetical protein Csa_010863 [Cucumis sativus])

HSP 1 Score: 132.1 bits (331), Expect = 1.6e-27
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 0 

Query: 1  MGISEAWMSRLQWSPMTYPFILTSKAYLRQCFCAKAAGLEQIEGLDSESGFGLLPFRGYS 60
          MGISEAWMSRLQWSPMTYPFILTSKAYLRQCFCAKAAGLEQIEGLDSESGFGLLPFRGYS
Sbjct: 1  MGISEAWMSRLQWSPMTYPFILTSKAYLRQCFCAKAAGLEQIEGLDSESGFGLLPFRGYS 60

Query: 61 T 62
          T
Sbjct: 61 T 61

[Close]
BLAST of CsaV3_3G013310 vs. ExPASy TrEMBL
Match: A0A0A0L7J7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G146690 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 7.9e-28
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 0 

Query: 1  MGISEAWMSRLQWSPMTYPFILTSKAYLRQCFCAKAAGLEQIEGLDSESGFGLLPFRGYS 60
          MGISEAWMSRLQWSPMTYPFILTSKAYLRQCFCAKAAGLEQIEGLDSESGFGLLPFRGYS
Sbjct: 1  MGISEAWMSRLQWSPMTYPFILTSKAYLRQCFCAKAAGLEQIEGLDSESGFGLLPFRGYS 60

Query: 61 T 62
          T
Sbjct: 61 T 61

The following BLAST results are available for this feature:
BLAST of CsaV3_3G013310 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN56984.11.6e-27100.00hypothetical protein Csa_010863 [Cucumis sativus][more]
BLAST of CsaV3_3G013310 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_3G013310 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L7J77.9e-28100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G146690 PE=4 SV=1[more]
BLAST of CsaV3_3G013310 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G013310.1CsaV3_3G013310.1mRNA