CsaV3_3G012070 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G012070
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Descriptionnucleolar and coiled-body phosphoprotein 1
Locationchr3: 9322721 .. 9326520 (-)
RNA-Seq ExpressionCsaV3_3G012070
SyntenyCsaV3_3G012070
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TAGCCATCGTAATAATCAACTCACATACTCTTTGAAAAATAGAAAGGTTTTAACACTTACCTACTTTATAAACATAAGAGAGGGAAACAAAAACCCTAGTTCTACTTCAGCTCCCTCCGGTCCCGCCTTTTTCTGCAGCCATAGCATCTCTTCAATCTTCTCTCCGATTCCCGAGTCTTCTTCTGCTCATCATCCACTCTTCAGCTTCTCTTCAAAGTCCAAACATTTATACTCATTGGAAGGATGCTCGAAGAACAAGGATGTTTTAAACCTCGCCAAGTTCTTCTCTCACACCACACTATGAAGCAAAGCAACAACCACACCCAAGCTCCCAATTCTGCCGATGAAACCCTATCTTTACACCCCCAGCACAGGACTCTTCTTCTTCACGCTGTAGCCTTCTTTTTGGAGCGCAATGGTTTCTCCAAAACCCTCAAAAAGTTTCGTTCCGAAGCCCAGATTGAGGTGCCTCCCGACTTTAGTCCTTTTTTTTCCCCTTCCTAAATAAGACTTTTTCGTTGTAATGATTAATTTTGTGGTTGCCCACTATTATGCTTTGCAATTTAGTCTATTGCTAGATGAATCACTTAGCTAATTGGGGCTGCTTCCTATTCATGGAGCTTCTCATTCCAAAATGTTCGGGCTTTATGCCAACTTACTTGCCAACTGACGTTCTTGTTTAATCCTACCTTCGTATTTTTATTGAACAAGTTTACTAGTTAGTAGTTATTTATAATAGCATCCCTCTTTTATCTTAAGTACTGCTAAATTTTGTACTCCCAGACATTCTATTTGTTGCAGTCAATTAAATGGTGATATGTGGTGGTCTTTAGCCCTTGATTAATTTTGGCTGCGAGTTTCTATATTGAAACAGTTTATGTTTCTGTTGCTATTGGTGCAGAAGGGTTCTTCAAAGGATTTATTGCTCAGTCTCGAAGAAATGTGCCACAAGCATTTAAAAAAATGGTAGGACCAGATATTTCTTTTGATTATGGTCTGTTGAGCTAAAACAAACATTGCGAAGTTTGTGTCTGCTTGTGCAGAATAGTCTGTTTAATGTTGTCTAGAGATCGAAGAACAATGGTGTTTAAAGAGATCAAATTTAAAAATTGCAAACAGTTTGTATTGTTTGATCGCCTTCTTACATTTCAGTTTTTTTTTAATATTAAGTTTTCTTTTTGTTCTTTTTAGCAATCCAGTTTTGAATAAAATACAAACCAAAGCATGCTTTTGTATGCCAATGCATCTGTGACTTATTTTCAATGAAATTGCCGGTTCTGCTGAGCATTAAAATCAAGGTTCTTGTGTTTCATCTAGATGTTCTTCAGTCATTGTATTTATGTTGGAAGTGATAGTATTTGTGACCCCAGCAATCTCCAGACTTCGTCATTTCATTGACATGTTACATCATTCTTTCATTTTCTATTGATTTTTTTGCCACAATCTTAGTAGATCTAGAAATAAATCCTACTATCTAACTTAAAATTCTAATATGCAGCAGTCAAGCCATCACAACTGAAAATAAACCAGGTATTCTCTTATTGTCTCCATTTATAAAGTAATTAGTGCTTTTTTTTTAATACGAAATGAAATGATTGATTTTAATTACACATTTTCCATTGTGTTGGATTTGATCCGTAGATGAAGAAACGGTGAAAGAGGTTGCTGATGGTAGGGTCCCTGAAGCACAAGAGGAACCTACAAAAAAGTCCAAGGATAAAAAGAAAATAAAAAAAAATGCAGTTCCTGAAACGCATGTGGATGCTGCAGAAAAAGAGAAATCAGAACCTGTCGAGAGTTTGAAGAACTCCAATGACACTACTGTCCACGATGAGGCAGGAAAGAAATCTAAGGATAAAAAGAAAAAGAAGAACAAAGAGAAGTTAGAGACTGTTGCTACAATTTCCAATGATATAGCTGTAGATTCCATTGGATTGAATGGTGATGTTGCCTCTCTGGAAGAAAAGGTTGTCAAATCCAAAACCAAGAAAAAAAAGGATGGTCGACATTCAAGCCATGAGAATTCAAACCAGCTAAATGATGGTACCAATATTTTAAACGAAGAGGAACAGAATGACATTTCTAAGAAAAGGAAAAGGTTGGCTTCTGAAGATAACGACATTCCTGCTGTTAATGAGAAAGCAACCGAAGATGTCAAACGTAGAAAATTAGAATGTTCAAAAGGAGGCAGTGATAGTGTGCAATCTACAAAGGTCGATGTAGATGCTGGAAATAGGAGCACTATCAATGAGGTTTCTCCGCAGACAAATGAATATGTTGAAAAAACGGCAGAGAAAACTTCCACAAAGAAAGCTTTTAAGAAACACTCAAATGGTTCAACCGAGGTATGTTAATTTAGCCTGTGCAAATCTTTTGATAATACAACTATGTTGAGACAATTTAATGTTCCATATGCATAAGAAAAAATGATGCTCTGTCTTCAATCCTTTCAATATTAAACTAGACTTCTGTTGGTTTAACGAGATTACCTGGGGCTTATTTGAAATTGCTTTCTAAGTACTAGCATTGTCATTGCACTTAGAAACACATTTTAAAGCACTCGACATGAGTGTTTTCAAATAGCCCTAGAGCATCATTAATAATGGTGAAATCCATTATTAACTTCTAAAACTCCACGAGCATGCCAAATATCCCACTACTAAGCAGCTCTGTTACTATTAATTTTATTTTTTTATGTTATTATTAGTACTATTATTATTGGTTTTTAATTTCATATCTGAAGCTGGTTGTGGTACTGGCAGGAGAATGAAAAACATAAATGTTAATTTGAAAAGGATAGTTGCTACGAGGGAAATCCACTAATCTAGGCAATGGCCAGTGAACATAGAGTAGTGGGATCAATGTTTTAAATTTTAATCTTTCCCTTAACTCAGATGTTCATTCTACACTTCATACAGCTGATGTATTGTATTATTGCAGCCAAAGACCATCAATCCATTTCAGAGGGTAAAAGTAGACGCCGTGACATTTGCTGATGAAAAACTTGCAGACAATTCTTACTGGGCCAAGGTGTGATTTGCTGCTTATTATTTAACTTTTTGCCGCTGCCGTTTTCACTAGGATCTTTTGTTTCTTATTTGTAATCTATCATTTCATACTGAGCAGGGTGGAGCCGAGAGTGGGTATGGTGCAAAAGCTCAAGAGGTTCTTGGGCAGGTTAAAGGAAGGTGATACATTTTATTCTTCTTTCATTTCTACTTAACTGTTATCATGTAGCTTTTACTTTTAGTTGTAGTTTCAGTTCTACTGCTGCTTTCTTGCTAAAACTGACACTGAGTTGTGTAGATGGAATTTTGATATATTTTCTGGTTTAGAAAAAGGCTCTTGATTCAAATTTATCGTGTATTAGGGGCTTTCGGCATGAAAAGACAAAGAAGAAGCGTGGGTCGTACCGAGGCGGTGTGATTGATCTGCAATCTCACTCGGTAAAGTTCAACTATTCTGATGATGATTAACCACGTGAATGGATTCACTATTCTGGTTCTTAACTGCTTTTGATCAAATCATGATTGAAAGTTTCCATTTTATGGAAAAAAATTTGGTTGTATGTTCCATGGAAACTCGAAAGAACTGGTGTTTCTATATTTATCATCAATTTTTTTGAGGGAGTCCATCCAAAAAATGGGCTATGCCTAATCAATTTTGAACTTATTATTGTGTAGGTTGTAGTTCTCCAAATGCTTTACTTCACTATATGTACGTTTATTGTTGTAACTGCGGCAACTGTGGATTGATTTTTGAATGAAACAAAGTTTTTTCCCATGTTTGTTTATTCATAG

mRNA sequence

ATGCTCGAAGAACAAGGATGTTTTAAACCTCGCCAAGTTCTTCTCTCACACCACACTATGAAGCAAAGCAACAACCACACCCAAGCTCCCAATTCTGCCGATGAAACCCTATCTTTACACCCCCAGCACAGGACTCTTCTTCTTCACGCTGTAGCCTTCTTTTTGGAGCGCAATGGTTTCTCCAAAACCCTCAAAAAGTTTCGTTCCGAAGCCCAGATTGAGGGTTCTTCAAAGGATTTATTGCTCAGTCTCGAAGAAATGTGCCACAAGCATTTAAAAAAATGCAGTCAAGCCATCACAACTGAAAATAAACCAGATGAAGAAACGGTGAAAGAGGTTGCTGATGGTAGGGTCCCTGAAGCACAAGAGGAACCTACAAAAAAGTCCAAGGATAAAAAGAAAATAAAAAAAAATGCAGTTCCTGAAACGCATGTGGATGCTGCAGAAAAAGAGAAATCAGAACCTGTCGAGAGTTTGAAGAACTCCAATGACACTACTGTCCACGATGAGGCAGGAAAGAAATCTAAGGATAAAAAGAAAAAGAAGAACAAAGAGAAGTTAGAGACTGTTGCTACAATTTCCAATGATATAGCTGTAGATTCCATTGGATTGAATGGTGATGTTGCCTCTCTGGAAGAAAAGGTTGTCAAATCCAAAACCAAGAAAAAAAAGGATGGTCGACATTCAAGCCATGAGAATTCAAACCAGCTAAATGATGGTACCAATATTTTAAACGAAGAGGAACAGAATGACATTTCTAAGAAAAGGAAAAGGTTGGCTTCTGAAGATAACGACATTCCTGCTGTTAATGAGAAAGCAACCGAAGATGTCAAACGTAGAAAATTAGAATGTTCAAAAGGAGGCAGTGATAGTGTGCAATCTACAAAGGTCGATGTAGATGCTGGAAATAGGAGCACTATCAATGAGGTTTCTCCGCAGACAAATGAATATGTTGAAAAAACGGCAGAGAAAACTTCCACAAAGAAAGCTTTTAAGAAACACTCAAATGGTTCAACCGAGCCAAAGACCATCAATCCATTTCAGAGGGTAAAAGTAGACGCCGTGACATTTGCTGATGAAAAACTTGCAGACAATTCTTACTGGGCCAAGGGTGGAGCCGAGAGTGGGTATGGTGCAAAAGCTCAAGAGGTTCTTGGGCAGGTTAAAGGAAGGGGCTTTCGGCATGAAAAGACAAAGAAGAAGCGTGGGTCGTACCGAGGCGGTGTGATTGATCTGCAATCTCACTCGGTAAAGTTCAACTATTCTGATGATGATTAA

Coding sequence (CDS)

ATGCTCGAAGAACAAGGATGTTTTAAACCTCGCCAAGTTCTTCTCTCACACCACACTATGAAGCAAAGCAACAACCACACCCAAGCTCCCAATTCTGCCGATGAAACCCTATCTTTACACCCCCAGCACAGGACTCTTCTTCTTCACGCTGTAGCCTTCTTTTTGGAGCGCAATGGTTTCTCCAAAACCCTCAAAAAGTTTCGTTCCGAAGCCCAGATTGAGGGTTCTTCAAAGGATTTATTGCTCAGTCTCGAAGAAATGTGCCACAAGCATTTAAAAAAATGCAGTCAAGCCATCACAACTGAAAATAAACCAGATGAAGAAACGGTGAAAGAGGTTGCTGATGGTAGGGTCCCTGAAGCACAAGAGGAACCTACAAAAAAGTCCAAGGATAAAAAGAAAATAAAAAAAAATGCAGTTCCTGAAACGCATGTGGATGCTGCAGAAAAAGAGAAATCAGAACCTGTCGAGAGTTTGAAGAACTCCAATGACACTACTGTCCACGATGAGGCAGGAAAGAAATCTAAGGATAAAAAGAAAAAGAAGAACAAAGAGAAGTTAGAGACTGTTGCTACAATTTCCAATGATATAGCTGTAGATTCCATTGGATTGAATGGTGATGTTGCCTCTCTGGAAGAAAAGGTTGTCAAATCCAAAACCAAGAAAAAAAAGGATGGTCGACATTCAAGCCATGAGAATTCAAACCAGCTAAATGATGGTACCAATATTTTAAACGAAGAGGAACAGAATGACATTTCTAAGAAAAGGAAAAGGTTGGCTTCTGAAGATAACGACATTCCTGCTGTTAATGAGAAAGCAACCGAAGATGTCAAACGTAGAAAATTAGAATGTTCAAAAGGAGGCAGTGATAGTGTGCAATCTACAAAGGTCGATGTAGATGCTGGAAATAGGAGCACTATCAATGAGGTTTCTCCGCAGACAAATGAATATGTTGAAAAAACGGCAGAGAAAACTTCCACAAAGAAAGCTTTTAAGAAACACTCAAATGGTTCAACCGAGCCAAAGACCATCAATCCATTTCAGAGGGTAAAAGTAGACGCCGTGACATTTGCTGATGAAAAACTTGCAGACAATTCTTACTGGGCCAAGGGTGGAGCCGAGAGTGGGTATGGTGCAAAAGCTCAAGAGGTTCTTGGGCAGGTTAAAGGAAGGGGCTTTCGGCATGAAAAGACAAAGAAGAAGCGTGGGTCGTACCGAGGCGGTGTGATTGATCTGCAATCTCACTCGGTAAAGTTCAACTATTCTGATGATGATTAA

Protein sequence

MLEEQGCFKPRQVLLSHHTMKQSNNHTQAPNSADETLSLHPQHRTLLLHAVAFFLERNGFSKTLKKFRSEAQIEGSSKDLLLSLEEMCHKHLKKCSQAITTENKPDEETVKEVADGRVPEAQEEPTKKSKDKKKIKKNAVPETHVDAAEKEKSEPVESLKNSNDTTVHDEAGKKSKDKKKKKNKEKLETVATISNDIAVDSIGLNGDVASLEEKVVKSKTKKKKDGRHSSHENSNQLNDGTNILNEEEQNDISKKRKRLASEDNDIPAVNEKATEDVKRRKLECSKGGSDSVQSTKVDVDAGNRSTINEVSPQTNEYVEKTAEKTSTKKAFKKHSNGSTEPKTINPFQRVKVDAVTFADEKLADNSYWAKGGAESGYGAKAQEVLGQVKGRGFRHEKTKKKRGSYRGGVIDLQSHSVKFNYSDDD*
Homology
BLAST of CsaV3_3G012070 vs. NCBI nr
Match: XP_011650931.1 (nucleolar and coiled-body phosphoprotein 1 isoform X2 [Cucumis sativus] >KAE8650328.1 hypothetical protein Csa_011722 [Cucumis sativus])

HSP 1 Score: 798.5 bits (2061), Expect = 2.8e-227
Identity = 425/425 (100.00%), Postives = 425/425 (100.00%), Query Frame = 0

Query: 1   MLEEQGCFKPRQVLLSHHTMKQSNNHTQAPNSADETLSLHPQHRTLLLHAVAFFLERNGF 60
           MLEEQGCFKPRQVLLSHHTMKQSNNHTQAPNSADETLSLHPQHRTLLLHAVAFFLERNGF
Sbjct: 1   MLEEQGCFKPRQVLLSHHTMKQSNNHTQAPNSADETLSLHPQHRTLLLHAVAFFLERNGF 60

Query: 61  SKTLKKFRSEAQIEGSSKDLLLSLEEMCHKHLKKCSQAITTENKPDEETVKEVADGRVPE 120
           SKTLKKFRSEAQIEGSSKDLLLSLEEMCHKHLKKCSQAITTENKPDEETVKEVADGRVPE
Sbjct: 61  SKTLKKFRSEAQIEGSSKDLLLSLEEMCHKHLKKCSQAITTENKPDEETVKEVADGRVPE 120

Query: 121 AQEEPTKKSKDKKKIKKNAVPETHVDAAEKEKSEPVESLKNSNDTTVHDEAGKKSKDKKK 180
           AQEEPTKKSKDKKKIKKNAVPETHVDAAEKEKSEPVESLKNSNDTTVHDEAGKKSKDKKK
Sbjct: 121 AQEEPTKKSKDKKKIKKNAVPETHVDAAEKEKSEPVESLKNSNDTTVHDEAGKKSKDKKK 180

Query: 181 KKNKEKLETVATISNDIAVDSIGLNGDVASLEEKVVKSKTKKKKDGRHSSHENSNQLNDG 240
           KKNKEKLETVATISNDIAVDSIGLNGDVASLEEKVVKSKTKKKKDGRHSSHENSNQLNDG
Sbjct: 181 KKNKEKLETVATISNDIAVDSIGLNGDVASLEEKVVKSKTKKKKDGRHSSHENSNQLNDG 240

Query: 241 TNILNEEEQNDISKKRKRLASEDNDIPAVNEKATEDVKRRKLECSKGGSDSVQSTKVDVD 300
           TNILNEEEQNDISKKRKRLASEDNDIPAVNEKATEDVKRRKLECSKGGSDSVQSTKVDVD
Sbjct: 241 TNILNEEEQNDISKKRKRLASEDNDIPAVNEKATEDVKRRKLECSKGGSDSVQSTKVDVD 300

Query: 301 AGNRSTINEVSPQTNEYVEKTAEKTSTKKAFKKHSNGSTEPKTINPFQRVKVDAVTFADE 360
           AGNRSTINEVSPQTNEYVEKTAEKTSTKKAFKKHSNGSTEPKTINPFQRVKVDAVTFADE
Sbjct: 301 AGNRSTINEVSPQTNEYVEKTAEKTSTKKAFKKHSNGSTEPKTINPFQRVKVDAVTFADE 360

Query: 361 KLADNSYWAKGGAESGYGAKAQEVLGQVKGRGFRHEKTKKKRGSYRGGVIDLQSHSVKFN 420
           KLADNSYWAKGGAESGYGAKAQEVLGQVKGRGFRHEKTKKKRGSYRGGVIDLQSHSVKFN
Sbjct: 361 KLADNSYWAKGGAESGYGAKAQEVLGQVKGRGFRHEKTKKKRGSYRGGVIDLQSHSVKFN 420

Query: 421 YSDDD 426
           YSDDD
Sbjct: 421 YSDDD 425

BLAST of CsaV3_3G012070 vs. NCBI nr
Match: XP_004134062.1 (nucleolar and coiled-body phosphoprotein 1 isoform X1 [Cucumis sativus])

HSP 1 Score: 793.9 bits (2049), Expect = 6.9e-226
Identity = 425/426 (99.77%), Postives = 425/426 (99.77%), Query Frame = 0

Query: 1   MLEEQGCFKPRQVLLSHHTMKQSNNHTQAPNSADETLSLHPQHRTLLLHAVAFFLERNGF 60
           MLEEQGCFKPRQVLLSHHTMKQSNNHTQAPNSADETLSLHPQHRTLLLHAVAFFLERNGF
Sbjct: 1   MLEEQGCFKPRQVLLSHHTMKQSNNHTQAPNSADETLSLHPQHRTLLLHAVAFFLERNGF 60

Query: 61  SKTLKKFRSEAQIE-GSSKDLLLSLEEMCHKHLKKCSQAITTENKPDEETVKEVADGRVP 120
           SKTLKKFRSEAQIE GSSKDLLLSLEEMCHKHLKKCSQAITTENKPDEETVKEVADGRVP
Sbjct: 61  SKTLKKFRSEAQIEKGSSKDLLLSLEEMCHKHLKKCSQAITTENKPDEETVKEVADGRVP 120

Query: 121 EAQEEPTKKSKDKKKIKKNAVPETHVDAAEKEKSEPVESLKNSNDTTVHDEAGKKSKDKK 180
           EAQEEPTKKSKDKKKIKKNAVPETHVDAAEKEKSEPVESLKNSNDTTVHDEAGKKSKDKK
Sbjct: 121 EAQEEPTKKSKDKKKIKKNAVPETHVDAAEKEKSEPVESLKNSNDTTVHDEAGKKSKDKK 180

Query: 181 KKKNKEKLETVATISNDIAVDSIGLNGDVASLEEKVVKSKTKKKKDGRHSSHENSNQLND 240
           KKKNKEKLETVATISNDIAVDSIGLNGDVASLEEKVVKSKTKKKKDGRHSSHENSNQLND
Sbjct: 181 KKKNKEKLETVATISNDIAVDSIGLNGDVASLEEKVVKSKTKKKKDGRHSSHENSNQLND 240

Query: 241 GTNILNEEEQNDISKKRKRLASEDNDIPAVNEKATEDVKRRKLECSKGGSDSVQSTKVDV 300
           GTNILNEEEQNDISKKRKRLASEDNDIPAVNEKATEDVKRRKLECSKGGSDSVQSTKVDV
Sbjct: 241 GTNILNEEEQNDISKKRKRLASEDNDIPAVNEKATEDVKRRKLECSKGGSDSVQSTKVDV 300

Query: 301 DAGNRSTINEVSPQTNEYVEKTAEKTSTKKAFKKHSNGSTEPKTINPFQRVKVDAVTFAD 360
           DAGNRSTINEVSPQTNEYVEKTAEKTSTKKAFKKHSNGSTEPKTINPFQRVKVDAVTFAD
Sbjct: 301 DAGNRSTINEVSPQTNEYVEKTAEKTSTKKAFKKHSNGSTEPKTINPFQRVKVDAVTFAD 360

Query: 361 EKLADNSYWAKGGAESGYGAKAQEVLGQVKGRGFRHEKTKKKRGSYRGGVIDLQSHSVKF 420
           EKLADNSYWAKGGAESGYGAKAQEVLGQVKGRGFRHEKTKKKRGSYRGGVIDLQSHSVKF
Sbjct: 361 EKLADNSYWAKGGAESGYGAKAQEVLGQVKGRGFRHEKTKKKRGSYRGGVIDLQSHSVKF 420

Query: 421 NYSDDD 426
           NYSDDD
Sbjct: 421 NYSDDD 426

BLAST of CsaV3_3G012070 vs. NCBI nr
Match: XP_011650933.1 (nucleolar and coiled-body phosphoprotein 1 isoform X4 [Cucumis sativus])

HSP 1 Score: 792.3 bits (2045), Expect = 2.0e-225
Identity = 424/425 (99.76%), Postives = 424/425 (99.76%), Query Frame = 0

Query: 1   MLEEQGCFKPRQVLLSHHTMKQSNNHTQAPNSADETLSLHPQHRTLLLHAVAFFLERNGF 60
           MLEEQGCFKPRQVLLSHHTMKQSNNHTQAPNSADETLSLHPQHRTLLLHAVAFFLERNGF
Sbjct: 1   MLEEQGCFKPRQVLLSHHTMKQSNNHTQAPNSADETLSLHPQHRTLLLHAVAFFLERNGF 60

Query: 61  SKTLKKFRSEAQIEGSSKDLLLSLEEMCHKHLKKCSQAITTENKPDEETVKEVADGRVPE 120
           SKTLKKFRSEAQIEGSSKDLLLSLEEMCHKHLKKC QAITTENKPDEETVKEVADGRVPE
Sbjct: 61  SKTLKKFRSEAQIEGSSKDLLLSLEEMCHKHLKKC-QAITTENKPDEETVKEVADGRVPE 120

Query: 121 AQEEPTKKSKDKKKIKKNAVPETHVDAAEKEKSEPVESLKNSNDTTVHDEAGKKSKDKKK 180
           AQEEPTKKSKDKKKIKKNAVPETHVDAAEKEKSEPVESLKNSNDTTVHDEAGKKSKDKKK
Sbjct: 121 AQEEPTKKSKDKKKIKKNAVPETHVDAAEKEKSEPVESLKNSNDTTVHDEAGKKSKDKKK 180

Query: 181 KKNKEKLETVATISNDIAVDSIGLNGDVASLEEKVVKSKTKKKKDGRHSSHENSNQLNDG 240
           KKNKEKLETVATISNDIAVDSIGLNGDVASLEEKVVKSKTKKKKDGRHSSHENSNQLNDG
Sbjct: 181 KKNKEKLETVATISNDIAVDSIGLNGDVASLEEKVVKSKTKKKKDGRHSSHENSNQLNDG 240

Query: 241 TNILNEEEQNDISKKRKRLASEDNDIPAVNEKATEDVKRRKLECSKGGSDSVQSTKVDVD 300
           TNILNEEEQNDISKKRKRLASEDNDIPAVNEKATEDVKRRKLECSKGGSDSVQSTKVDVD
Sbjct: 241 TNILNEEEQNDISKKRKRLASEDNDIPAVNEKATEDVKRRKLECSKGGSDSVQSTKVDVD 300

Query: 301 AGNRSTINEVSPQTNEYVEKTAEKTSTKKAFKKHSNGSTEPKTINPFQRVKVDAVTFADE 360
           AGNRSTINEVSPQTNEYVEKTAEKTSTKKAFKKHSNGSTEPKTINPFQRVKVDAVTFADE
Sbjct: 301 AGNRSTINEVSPQTNEYVEKTAEKTSTKKAFKKHSNGSTEPKTINPFQRVKVDAVTFADE 360

Query: 361 KLADNSYWAKGGAESGYGAKAQEVLGQVKGRGFRHEKTKKKRGSYRGGVIDLQSHSVKFN 420
           KLADNSYWAKGGAESGYGAKAQEVLGQVKGRGFRHEKTKKKRGSYRGGVIDLQSHSVKFN
Sbjct: 361 KLADNSYWAKGGAESGYGAKAQEVLGQVKGRGFRHEKTKKKRGSYRGGVIDLQSHSVKFN 420

Query: 421 YSDDD 426
           YSDDD
Sbjct: 421 YSDDD 424

BLAST of CsaV3_3G012070 vs. NCBI nr
Match: XP_011650932.1 (nucleolar and coiled-body phosphoprotein 1 isoform X3 [Cucumis sativus])

HSP 1 Score: 787.7 bits (2033), Expect = 4.9e-224
Identity = 424/426 (99.53%), Postives = 424/426 (99.53%), Query Frame = 0

Query: 1   MLEEQGCFKPRQVLLSHHTMKQSNNHTQAPNSADETLSLHPQHRTLLLHAVAFFLERNGF 60
           MLEEQGCFKPRQVLLSHHTMKQSNNHTQAPNSADETLSLHPQHRTLLLHAVAFFLERNGF
Sbjct: 1   MLEEQGCFKPRQVLLSHHTMKQSNNHTQAPNSADETLSLHPQHRTLLLHAVAFFLERNGF 60

Query: 61  SKTLKKFRSEAQIE-GSSKDLLLSLEEMCHKHLKKCSQAITTENKPDEETVKEVADGRVP 120
           SKTLKKFRSEAQIE GSSKDLLLSLEEMCHKHLKKC QAITTENKPDEETVKEVADGRVP
Sbjct: 61  SKTLKKFRSEAQIEKGSSKDLLLSLEEMCHKHLKKC-QAITTENKPDEETVKEVADGRVP 120

Query: 121 EAQEEPTKKSKDKKKIKKNAVPETHVDAAEKEKSEPVESLKNSNDTTVHDEAGKKSKDKK 180
           EAQEEPTKKSKDKKKIKKNAVPETHVDAAEKEKSEPVESLKNSNDTTVHDEAGKKSKDKK
Sbjct: 121 EAQEEPTKKSKDKKKIKKNAVPETHVDAAEKEKSEPVESLKNSNDTTVHDEAGKKSKDKK 180

Query: 181 KKKNKEKLETVATISNDIAVDSIGLNGDVASLEEKVVKSKTKKKKDGRHSSHENSNQLND 240
           KKKNKEKLETVATISNDIAVDSIGLNGDVASLEEKVVKSKTKKKKDGRHSSHENSNQLND
Sbjct: 181 KKKNKEKLETVATISNDIAVDSIGLNGDVASLEEKVVKSKTKKKKDGRHSSHENSNQLND 240

Query: 241 GTNILNEEEQNDISKKRKRLASEDNDIPAVNEKATEDVKRRKLECSKGGSDSVQSTKVDV 300
           GTNILNEEEQNDISKKRKRLASEDNDIPAVNEKATEDVKRRKLECSKGGSDSVQSTKVDV
Sbjct: 241 GTNILNEEEQNDISKKRKRLASEDNDIPAVNEKATEDVKRRKLECSKGGSDSVQSTKVDV 300

Query: 301 DAGNRSTINEVSPQTNEYVEKTAEKTSTKKAFKKHSNGSTEPKTINPFQRVKVDAVTFAD 360
           DAGNRSTINEVSPQTNEYVEKTAEKTSTKKAFKKHSNGSTEPKTINPFQRVKVDAVTFAD
Sbjct: 301 DAGNRSTINEVSPQTNEYVEKTAEKTSTKKAFKKHSNGSTEPKTINPFQRVKVDAVTFAD 360

Query: 361 EKLADNSYWAKGGAESGYGAKAQEVLGQVKGRGFRHEKTKKKRGSYRGGVIDLQSHSVKF 420
           EKLADNSYWAKGGAESGYGAKAQEVLGQVKGRGFRHEKTKKKRGSYRGGVIDLQSHSVKF
Sbjct: 361 EKLADNSYWAKGGAESGYGAKAQEVLGQVKGRGFRHEKTKKKRGSYRGGVIDLQSHSVKF 420

Query: 421 NYSDDD 426
           NYSDDD
Sbjct: 421 NYSDDD 425

BLAST of CsaV3_3G012070 vs. NCBI nr
Match: XP_008438518.1 (PREDICTED: nucleolar and coiled-body phosphoprotein 1 [Cucumis melo])

HSP 1 Score: 704.1 bits (1816), Expect = 7.2e-199
Identity = 388/428 (90.65%), Postives = 399/428 (93.22%), Query Frame = 0

Query: 1   MLEEQGCFKPRQVLLSHHTMKQSNNHTQAPNSADETLSLHPQHRTLLLHAVAFFLERNGF 60
           MLEE+GCFKPRQVLLSHHTMKQSNNHTQAPNSADE LSLHPQHRTLLLHAVAFFLERNGF
Sbjct: 1   MLEEKGCFKPRQVLLSHHTMKQSNNHTQAPNSADEALSLHPQHRTLLLHAVAFFLERNGF 60

Query: 61  SKTLKKFRSEAQIE-GSSKDLLLSLEEMCHKHLKKCSQAITTENKPDEETVKEVADGRVP 120
           SKTLKKFRSEAQI+ GSSKDLLLSLEEMCHKHLKKCSQAITTENKPDEETVKEVADGRVP
Sbjct: 61  SKTLKKFRSEAQIQKGSSKDLLLSLEEMCHKHLKKCSQAITTENKPDEETVKEVADGRVP 120

Query: 121 EAQEEPTKKSKDKKKIKKNAVPETHVDAAEKEKSEPV--ESLKNSNDTTVHDEAGKKSKD 180
           EAQEE TKKSKDKKKIKKNAVPE +VDAAE EKSEPV  ESL NSN TTVHD+AGKKSKD
Sbjct: 121 EAQEERTKKSKDKKKIKKNAVPEMYVDAAENEKSEPVHAESLNNSNGTTVHDDAGKKSKD 180

Query: 181 KKKKKNKEKLETVATISNDIAVDSIGLNGDVASLEEKVVKSKTKKKKDGRHSSHENSNQL 240
           KKKKKNKEKLETVATISNDIAVDSIGLNGDVASLEEKVVKSKTKKKKDGRH S E   + 
Sbjct: 181 KKKKKNKEKLETVATISNDIAVDSIGLNGDVASLEEKVVKSKTKKKKDGRHLSDEKEKE- 240

Query: 241 NDGTNILNEEEQNDISKKRKRLASEDNDIPAVNEKATEDVKRRKLECSKGGSDSVQSTKV 300
               N+   +EQNDISKKRKRLASEDNDIPAV+EK TEDVKRRKLECSKGG+ S+QSTKV
Sbjct: 241 ---QNVSVVDEQNDISKKRKRLASEDNDIPAVDEKETEDVKRRKLECSKGGNVSLQSTKV 300

Query: 301 DVDAGNRSTINEVSPQTNEYVEKTAEKTSTKKAFKKHSNGSTEPKTINPFQRVKVDAVTF 360
           DVDAGNRS INE+S QTNE VEKTAEKTSTKKAFKKHSNGSTEPKTIN FQRVKVDAVTF
Sbjct: 301 DVDAGNRSAINELSQQTNESVEKTAEKTSTKKAFKKHSNGSTEPKTINAFQRVKVDAVTF 360

Query: 361 ADEKLADNSYWAKGGAESGYGAKAQEVLGQVKGRGFRHEKTKKKRGSYRGGVIDLQSHSV 420
           ADEKLADNSYWAKGGAESGYGAKAQEVLGQVKGR FRHEKTKKKRGSYRGGVIDLQSHSV
Sbjct: 361 ADEKLADNSYWAKGGAESGYGAKAQEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSV 420

Query: 421 KFNYSDDD 426
           KFNYSDDD
Sbjct: 421 KFNYSDDD 424

BLAST of CsaV3_3G012070 vs. ExPASy Swiss-Prot
Match: E9Q5C9 (Nucleolar and coiled-body phosphoprotein 1 OS=Mus musculus OX=10090 GN=Nolc1 PE=1 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 4.8e-12
Identity = 98/348 (28.16%), Postives = 153/348 (43.97%), Query Frame = 0

Query: 90  KHLKKCSQAITTENKPDEETVKEVADGRVPEAQEEPTKKSKDKKKIKKNAVPETHVDAAE 149
           K  +  S +  +++  DE   K V+  + P+    P   +      K    P+    + +
Sbjct: 366 KKAESSSDSSDSDSSEDEAPAKPVSTTKSPKPAVTPKPSA-----AKAVTTPKQPAGSNQ 425

Query: 150 KEKSEPVESLKNSND--TTVHDEAGKKSKDKKKKKNKEKLETVATISNDIAVDSIGLNGD 209
           K +S   +S  +  +  ++  +EA KKS    K K   K              S   +  
Sbjct: 426 KPQSRKADSSSSEEESSSSEEEEASKKSATTPKAKVTAKAAPAKQAPQAAGDSSSDSDSS 485

Query: 210 VASLEEKVVKSKTKKKKDG--------------RHSSHENSNQLNDGTNILNEEEQNDIS 269
            +  EEK  K   KKK  G              + SS  +S+   D +    E+++   +
Sbjct: 486 SSEEEEKTPKPPAKKKAAGGAVSTPAPGKKAEAKSSSSSSSSSSEDSSE--EEKKKKPKA 545

Query: 270 KKRKRLASEDNDIPA-VNEKATEDVKRRKLECSKGGSDSVQSTKVDVDAGNRSTINEVSP 329
              K  AS+ N  PA +N KA ++ +  + E           TK    +G +   NE + 
Sbjct: 546 TTPKIQASKANGTPASLNGKAAKESEEEEEEEETEEKKKAAGTK--PGSGKKRKQNETAD 605

Query: 330 QTNEYVEKTAEKTSTKKAFKKHSNGSTEPKTINPFQRVKVDAVTFADEKLADNSYWAKGG 389
           +      K   K  T   F K   G  E +  +PF+RV+ + +   D ++ADNS+ AK G
Sbjct: 606 EATTPQAKKV-KLETPNTFPKRKKG--ERRASSPFRRVREEEIE-VDSRVADNSFDAKRG 665

Query: 390 AESGYGAKAQEVLGQVKGRGFRHEKTKKKRGSYRGGVIDLQSHSVKFN 421
           A   +G +A +VL   KG+ FRHEKTKKKRGSYRGG I +Q +SVKF+
Sbjct: 666 AAGDWGERANQVLKFTKGKSFRHEKTKKKRGSYRGGSISVQVNSVKFD 700

BLAST of CsaV3_3G012070 vs. ExPASy Swiss-Prot
Match: P41777 (Nucleolar and coiled-body phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Nolc1 PE=1 SV=2)

HSP 1 Score: 69.3 bits (168), Expect = 1.2e-10
Identity = 99/347 (28.53%), Postives = 163/347 (46.97%), Query Frame = 0

Query: 90  KHLKKCSQAITTENKPDEETVKEVADGRVPEAQEEPTKKSKDKKKIKKNAVPETHVDAAE 149
           K  +  S +  +++  DE   K V+  + P ++   T K    K +   A P+    + +
Sbjct: 367 KKAESSSDSSDSDSSEDEAPAKPVSATKSPLSKPAVTPKPPAAKAV---ATPKQPAGSGQ 426

Query: 150 KEKSEPVESLKNSND-TTVHDEAGKKSKDKKKKKNKEKL--ETVATISNDIAVDSIGLNG 209
           K +S   +S  +  + ++  +EA KKS    K +   K      A  +     DS   + 
Sbjct: 427 KPQSRKADSSSSEEESSSSEEEATKKSVTTPKARVTAKAAPSLPAKQAPRAGGDSSSDSE 486

Query: 210 DVASLEEKVV--KSKTKKKKDG---------RHSSHENSNQLNDGTNILNEEEQNDISKK 269
             +S EEK    K   KKK  G         + ++ E+S+  +   +   EE++   SK 
Sbjct: 487 SSSSEEEKKTPPKPPAKKKAAGAAVPKPTPVKKAAAESSSSSSSSEDSSEEEKKKPKSKA 546

Query: 270 R-KRLASEDNDIPA-VNEKATEDVKRRKLECSKGGSDSVQSTKVDVDAGNRSTINEVSPQ 329
             K  A + N +PA  N KA ++ +  + +  +    + ++      +G +   NE + +
Sbjct: 547 TPKPQAGKANGVPASQNGKAGKESEEEEEDTEQ----NKKAAGTKPGSGKKRKHNETADE 606

Query: 330 TNEYVEKTAEKTSTKKAFKKHSNGSTEPKTINPFQRVKVDAVTFADEKLADNSYWAKGGA 389
                 K   K  T   F K   G  E +  +PF+RV+ + +   D ++ADNS+ AK GA
Sbjct: 607 AATPQSKKV-KLQTPNTFPKRKKG--EKRASSPFRRVREEEIE-VDSRVADNSFDAKRGA 666

Query: 390 ESGYGAKAQEVLGQVKGRGFRHEKTKKKRGSYRGGVIDLQSHSVKFN 421
              +G +A +VL   KG+ FRHEKTKKKRGSYRGG I +Q +SVKF+
Sbjct: 667 AGDWGERANQVLKFTKGKSFRHEKTKKKRGSYRGGSISVQVNSVKFD 702

BLAST of CsaV3_3G012070 vs. ExPASy Swiss-Prot
Match: Q14978 (Nucleolar and coiled-body phosphoprotein 1 OS=Homo sapiens OX=9606 GN=NOLC1 PE=1 SV=2)

HSP 1 Score: 65.5 bits (158), Expect = 1.7e-09
Identity = 104/398 (26.13%), Postives = 168/398 (42.21%), Query Frame = 0

Query: 62  KTLKKFRSEAQIEGSSKDLLLSLEEMCHKHLKKCSQAITTENKPDEETVKEVADGRVPEA 121
           K ++K +     E SS +   S EE      K      TT+  P ++  +  +D    ++
Sbjct: 311 KAVEKQQPVESSEDSSDESDSSSEEEKKPPTKAVVSKATTKPPPAKKAAESSSDSSDSDS 370

Query: 122 QEE---------PTKKSKDKKKIKKNAVPETHVDAAEKEKSEPVESLKNSNDTTVHDEAG 181
            E+          TK S +K  +   +       A ++      + L    D++  +E  
Sbjct: 371 SEDDEAPSKPAGTTKNSSNKPAVTTKSPAVKPAAAPKQPVGGGQKLLTRKADSSSSEEES 430

Query: 182 KKSKDKKKKK----NKEKLETVATI----------SNDIAVDSIGLNGDVASLEEKVVKS 241
             S+++K KK     K K    A +          S D + DS   + +    EEK  KS
Sbjct: 431 SSSEEEKTKKMVATTKPKATAKAALSLPAKQAPQGSRDSSSDSDSSSSE--EEEEKTSKS 490

Query: 242 KTKKK-------------KDGRHSSHENSNQLNDGTNILNEEEQ---NDISKKRKRLASE 301
             KKK                +    E+SN  +   +   EEE+       + +   A+ 
Sbjct: 491 AVKKKPQKVAGGAAPSKPASAKKGKAESSNSSSSDDSSEEEEEKLKGKGSPRPQAPKANG 550

Query: 302 DNDIPAVNEKATEDVKRRKLECSKGGSDSVQSTKVDVDAGNRSTINEVSPQTNEYVEKTA 361
            + + A N KA ++ +  + E  K      +S  +     N +     +PQ  +      
Sbjct: 551 TSALTAQNGKAAKNSEEEEEEKKKAAVVVSKSGSLKKRKQNEAAKEAETPQAKKI----- 610

Query: 362 EKTSTKKAFKKHSNGSTEPKTINPFQRVKVDAVTFADEKLADNSYWAKGGAESGYGAKAQ 421
            K  T   F K   G  E +  +PF+RV+ + +   D ++ADNS+ AK GA   +G +A 
Sbjct: 611 -KLQTPNTFPKRKKG--EKRASSPFRRVREEEIE-VDSRVADNSFDAKRGAAGDWGERAN 670

BLAST of CsaV3_3G012070 vs. ExPASy Swiss-Prot
Match: P32583 (Suppressor protein SRP40 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=SRP40 PE=1 SV=2)

HSP 1 Score: 52.8 bits (125), Expect = 1.1e-05
Identity = 78/331 (23.56%), Postives = 137/331 (41.39%), Query Frame = 0

Query: 96  SQAITTENKPDEETVKEVADGRVPEAQEEPTKKSKDKKKIKKNAVPETHVDAAE--KEKS 155
           S +  +E+  + ++    +      + +E + +S+ + + KK A    + DA E  K K+
Sbjct: 87  SSSSDSESSSESDSSSSGSSSSSSSSSDESSSESESEDETKKRARESDNEDAKETKKAKT 146

Query: 156 EP-----VESLKNSNDTTVHDEAGKKSKDKKKKKNKEKLETVATISNDIAVDSIGLNGDV 215
           EP      ES  + + ++   E+G +S       +    ++ +   +D    S   + D 
Sbjct: 147 EPESSSSSESSSSGSSSSSESESGSESDSDSSSSSSSSSDSESDSESDSQSSSSSSSSDS 206

Query: 216 ASLEEKVVKSKTKKKKDGRHSSHENSNQLNDGTNILNEEEQNDISKKRKRLASEDNDIPA 275
           +S  +    S +        SS  +S+  +D  +  +    +D S      +S D+   +
Sbjct: 207 SSDSD----SSSSDSSSDSDSSSSSSSSSSDSDSDSDSSSDSDSSGSSDSSSSSDS---S 266

Query: 276 VNEKATEDVKRRKLECSKGGSDSVQSTKVDVDAGNRSTINEVSPQTNEYVEKTAEKTSTK 335
            +E  + D      +   G S  +++ +   D    S   E    +NE     +  +S  
Sbjct: 267 SDESTSSDSSDSDSDSDSGSSSELETKEATAD---ESKAEETPASSNESTPSASSSSSAN 326

Query: 336 KAFKKHSNGSTEPKTINPFQRVKVDAVTFADEKLADNSYWAKGGAESGYGAKAQEVLGQV 395
           K          +      F RV    + F   +L DN+Y    GA   +G KA E LG+V
Sbjct: 327 KLNIPAGTDEIKEGQRKHFSRVDRSKINFEAWELTDNTY---KGAAGTWGEKANEKLGRV 386

Query: 396 KGRGFRHEKTKKKRGSYRGGVIDLQSHSVKF 420
           +G+ F   K K KRGSYRGG I L+S S KF
Sbjct: 387 RGKDFTKNKNKMKRGSYRGGSITLESGSYKF 404

BLAST of CsaV3_3G012070 vs. ExPASy Swiss-Prot
Match: Q9P785 (LisH domain-containing protein C1711.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC1711.05 PE=4 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 9.7e-05
Identity = 85/355 (23.94%), Postives = 148/355 (41.69%), Query Frame = 0

Query: 69  SEAQIEGSSKDLLLSLEEMCHKHLKKCSQAITTENKPDEETVKEVADGRVPEAQEEPTKK 128
           SE++      D   S  +   +   + S + ++ +  + E+  E +D     +  E    
Sbjct: 117 SESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESS 176

Query: 129 SKDKKKIKKNAVPETHVDAAEKEKSEPVESLKNSNDTTVHDEAGKKSKDKKKKKNKEKLE 188
           S+D      N    +  D+  +  SE  +S  +S+D+    E+  +  D     +  + E
Sbjct: 177 SED------NDSSSSSSDSESESSSEDSDSSSSSSDS--ESESSSEGSDSSSSSSSSESE 236

Query: 189 TVATISNDIAVDSIGLNGDVASLEEKVVKSKTKKKKDGRHSSHENSNQLNDGTNILNEEE 248
           + ++  ND +  S     + +S +     S +  + +      ++S+  +D      ++ 
Sbjct: 237 S-SSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSKDSDSSSNSSDS----EDDS 296

Query: 249 QNDISKKRKRLASEDNDIPAVNEKATEDVKRRKLECSKGGSDSVQSTKVDVDAGNRSTIN 308
            +D S      +SED+D       +++       E     +D+  S +V   +   ST +
Sbjct: 297 SSDSSDSESESSSEDSD---STSSSSDSDSSSSSEDGNSNTDTTTSGEVSAQSSTNSTSS 356

Query: 309 EVSPQT-NEYVEKTAEKTSTKKAFKKHSNGSTEPK--TINPFQRV-KVDAVTFADEKLAD 368
           E S    +E   K  +K+  +K     S+ ST+    T  PF RV       FA   L D
Sbjct: 357 EESTSVKDEDSSKIHDKSLKRKHEDDESSTSTKSSRTTKTPFTRVGDPSQWDFASPALRD 416

Query: 369 NSYWAKGGAESGYGAKAQEVLGQVKGRGFRHEKTKKKRGSYRGGVIDLQSHSVKF 420
           NS+      E  YG  A   L   +G+GFR EK KKKRGSYRGG I+ +  S KF
Sbjct: 417 NSF----NFEDDYGTLANRDLIVTRGKGFRQEKNKKKRGSYRGGRINTEVRSFKF 451

BLAST of CsaV3_3G012070 vs. ExPASy TrEMBL
Match: A0A1S3AWK1 (nucleolar and coiled-body phosphoprotein 1 OS=Cucumis melo OX=3656 GN=LOC103483590 PE=4 SV=1)

HSP 1 Score: 704.1 bits (1816), Expect = 3.5e-199
Identity = 388/428 (90.65%), Postives = 399/428 (93.22%), Query Frame = 0

Query: 1   MLEEQGCFKPRQVLLSHHTMKQSNNHTQAPNSADETLSLHPQHRTLLLHAVAFFLERNGF 60
           MLEE+GCFKPRQVLLSHHTMKQSNNHTQAPNSADE LSLHPQHRTLLLHAVAFFLERNGF
Sbjct: 1   MLEEKGCFKPRQVLLSHHTMKQSNNHTQAPNSADEALSLHPQHRTLLLHAVAFFLERNGF 60

Query: 61  SKTLKKFRSEAQIE-GSSKDLLLSLEEMCHKHLKKCSQAITTENKPDEETVKEVADGRVP 120
           SKTLKKFRSEAQI+ GSSKDLLLSLEEMCHKHLKKCSQAITTENKPDEETVKEVADGRVP
Sbjct: 61  SKTLKKFRSEAQIQKGSSKDLLLSLEEMCHKHLKKCSQAITTENKPDEETVKEVADGRVP 120

Query: 121 EAQEEPTKKSKDKKKIKKNAVPETHVDAAEKEKSEPV--ESLKNSNDTTVHDEAGKKSKD 180
           EAQEE TKKSKDKKKIKKNAVPE +VDAAE EKSEPV  ESL NSN TTVHD+AGKKSKD
Sbjct: 121 EAQEERTKKSKDKKKIKKNAVPEMYVDAAENEKSEPVHAESLNNSNGTTVHDDAGKKSKD 180

Query: 181 KKKKKNKEKLETVATISNDIAVDSIGLNGDVASLEEKVVKSKTKKKKDGRHSSHENSNQL 240
           KKKKKNKEKLETVATISNDIAVDSIGLNGDVASLEEKVVKSKTKKKKDGRH S E   + 
Sbjct: 181 KKKKKNKEKLETVATISNDIAVDSIGLNGDVASLEEKVVKSKTKKKKDGRHLSDEKEKE- 240

Query: 241 NDGTNILNEEEQNDISKKRKRLASEDNDIPAVNEKATEDVKRRKLECSKGGSDSVQSTKV 300
               N+   +EQNDISKKRKRLASEDNDIPAV+EK TEDVKRRKLECSKGG+ S+QSTKV
Sbjct: 241 ---QNVSVVDEQNDISKKRKRLASEDNDIPAVDEKETEDVKRRKLECSKGGNVSLQSTKV 300

Query: 301 DVDAGNRSTINEVSPQTNEYVEKTAEKTSTKKAFKKHSNGSTEPKTINPFQRVKVDAVTF 360
           DVDAGNRS INE+S QTNE VEKTAEKTSTKKAFKKHSNGSTEPKTIN FQRVKVDAVTF
Sbjct: 301 DVDAGNRSAINELSQQTNESVEKTAEKTSTKKAFKKHSNGSTEPKTINAFQRVKVDAVTF 360

Query: 361 ADEKLADNSYWAKGGAESGYGAKAQEVLGQVKGRGFRHEKTKKKRGSYRGGVIDLQSHSV 420
           ADEKLADNSYWAKGGAESGYGAKAQEVLGQVKGR FRHEKTKKKRGSYRGGVIDLQSHSV
Sbjct: 361 ADEKLADNSYWAKGGAESGYGAKAQEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSV 420

Query: 421 KFNYSDDD 426
           KFNYSDDD
Sbjct: 421 KFNYSDDD 424

BLAST of CsaV3_3G012070 vs. ExPASy TrEMBL
Match: A0A0A0L738 (LisH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G135020 PE=4 SV=1)

HSP 1 Score: 702.6 bits (1812), Expect = 1.0e-198
Identity = 382/425 (89.88%), Postives = 382/425 (89.88%), Query Frame = 0

Query: 1   MLEEQGCFKPRQVLLSHHTMKQSNNHTQAPNSADETLSLHPQHRTLLLHAVAFFLERNGF 60
           MLEEQGCFKPRQVLLSHHTMKQSNNHTQAPNSADETLSLHPQHRTLLLHAVAFFLERNGF
Sbjct: 1   MLEEQGCFKPRQVLLSHHTMKQSNNHTQAPNSADETLSLHPQHRTLLLHAVAFFLERNGF 60

Query: 61  SKTLKKFRSEAQIEGSSKDLLLSLEEMCHKHLKKCSQAITTENKPDEETVKEVADGRVPE 120
           SKTLKKFRSEAQIEGSSKDLLLSLEEMCHKHLKKCSQAITTENKP               
Sbjct: 61  SKTLKKFRSEAQIEGSSKDLLLSLEEMCHKHLKKCSQAITTENKP--------------- 120

Query: 121 AQEEPTKKSKDKKKIKKNAVPETHVDAAEKEKSEPVESLKNSNDTTVHDEAGKKSKDKKK 180
                                       EKEKSEPVESLKNSNDTTVHDEAGKKSKDKKK
Sbjct: 121 ----------------------------EKEKSEPVESLKNSNDTTVHDEAGKKSKDKKK 180

Query: 181 KKNKEKLETVATISNDIAVDSIGLNGDVASLEEKVVKSKTKKKKDGRHSSHENSNQLNDG 240
           KKNKEKLETVATISNDIAVDSIGLNGDVASLEEKVVKSKTKKKKDGRHSSHENSNQLNDG
Sbjct: 181 KKNKEKLETVATISNDIAVDSIGLNGDVASLEEKVVKSKTKKKKDGRHSSHENSNQLNDG 240

Query: 241 TNILNEEEQNDISKKRKRLASEDNDIPAVNEKATEDVKRRKLECSKGGSDSVQSTKVDVD 300
           TNILNEEEQNDISKKRKRLASEDNDIPAVNEKATEDVKRRKLECSKGGSDSVQSTKVDVD
Sbjct: 241 TNILNEEEQNDISKKRKRLASEDNDIPAVNEKATEDVKRRKLECSKGGSDSVQSTKVDVD 300

Query: 301 AGNRSTINEVSPQTNEYVEKTAEKTSTKKAFKKHSNGSTEPKTINPFQRVKVDAVTFADE 360
           AGNRSTINEVSPQTNEYVEKTAEKTSTKKAFKKHSNGSTEPKTINPFQRVKVDAVTFADE
Sbjct: 301 AGNRSTINEVSPQTNEYVEKTAEKTSTKKAFKKHSNGSTEPKTINPFQRVKVDAVTFADE 360

Query: 361 KLADNSYWAKGGAESGYGAKAQEVLGQVKGRGFRHEKTKKKRGSYRGGVIDLQSHSVKFN 420
           KLADNSYWAKGGAESGYGAKAQEVLGQVKGRGFRHEKTKKKRGSYRGGVIDLQSHSVKFN
Sbjct: 361 KLADNSYWAKGGAESGYGAKAQEVLGQVKGRGFRHEKTKKKRGSYRGGVIDLQSHSVKFN 382

Query: 421 YSDDD 426
           YSDDD
Sbjct: 421 YSDDD 382

BLAST of CsaV3_3G012070 vs. ExPASy TrEMBL
Match: A0A5D3D1D6 (Nucleolar and coiled-body phosphoprotein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G001630 PE=4 SV=1)

HSP 1 Score: 663.3 bits (1710), Expect = 6.8e-187
Identity = 369/409 (90.22%), Postives = 378/409 (92.42%), Query Frame = 0

Query: 20  MKQSNNHTQAPNSADETLSLHPQHRTLLLHAVAFFLERNGFSKTLKKFRSEAQIE-GSSK 79
           MKQSNNHTQAPNSADE LSLHPQHRTLLLHAVAFFLERNGFSKTLKKFRSEAQI+ GSSK
Sbjct: 1   MKQSNNHTQAPNSADEALSLHPQHRTLLLHAVAFFLERNGFSKTLKKFRSEAQIQKGSSK 60

Query: 80  DLLLSLEEMCHKHLKKCSQAITTENKPDEETVKEVADGRVPEAQEEPTKKSKDKKKIKKN 139
           DLLLSLEEMCHKHLKKCSQAITTENKPDEETVKEVADGRVPEAQEE TKKSKDKKKIKKN
Sbjct: 61  DLLLSLEEMCHKHLKKCSQAITTENKPDEETVKEVADGRVPEAQEERTKKSKDKKKIKKN 120

Query: 140 AVPETHVDAAEKEKSEPV--ESLKNSNDTTVHDEAGKKSKDKKKKKNKEKLETVATISND 199
           AVPE +VDAAE EKSEPV  ESL N N TTVHDEAGKKSKDKKKKKNKEKLET ATISND
Sbjct: 121 AVPEMYVDAAENEKSEPVHAESLNNFNGTTVHDEAGKKSKDKKKKKNKEKLETAATISND 180

Query: 200 IAVDSIGLNGDVASLEEKVVKSKTKKKKDGRHSSHENSNQLNDGTNILNEEEQNDISKKR 259
           IAVDSIGLNGDVASLEEKVVKSKTKKKKDGRH S E   +     N+   +EQNDISKKR
Sbjct: 181 IAVDSIGLNGDVASLEEKVVKSKTKKKKDGRHLSDEKEKE----QNVSVVDEQNDISKKR 240

Query: 260 KRLASEDNDIPAVNEKATEDVKRRKLECSKGGSDSVQSTKVDVDAGNRSTINEVSPQTNE 319
           KRLASEDNDIPAV+EK TEDVKRRKLECSKGG+ S+QSTKVDVDAGNRS INE+S QTNE
Sbjct: 241 KRLASEDNDIPAVDEKETEDVKRRKLECSKGGNVSLQSTKVDVDAGNRSAINELSQQTNE 300

Query: 320 YVEKTAEKTSTKKAFKKHSNGSTEPKTINPFQRVKVDAVTFADEKLADNSYWAKGGAESG 379
            VEKTAEKTSTKKAFKKHSNGSTEPKTIN FQRVKVDAVTFADEKLADNSYWAKGGAESG
Sbjct: 301 SVEKTAEKTSTKKAFKKHSNGSTEPKTINAFQRVKVDAVTFADEKLADNSYWAKGGAESG 360

Query: 380 YGAKAQEVLGQVKGRGFRHEKTKKKRGSYRGGVIDLQSHSVKFNYSDDD 426
           YGAKAQEVLGQVKGR FRHEKTKKKRGSYRGGVIDLQSHSVKFNYSDDD
Sbjct: 361 YGAKAQEVLGQVKGRDFRHEKTKKKRGSYRGGVIDLQSHSVKFNYSDDD 405

BLAST of CsaV3_3G012070 vs. ExPASy TrEMBL
Match: A0A5A7U1N0 (Nucleolar and coiled-body phosphoprotein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G004900 PE=4 SV=1)

HSP 1 Score: 651.4 bits (1679), Expect = 2.7e-183
Identity = 367/417 (88.01%), Postives = 376/417 (90.17%), Query Frame = 0

Query: 20  MKQSNNHTQAPNSADETLSLHPQHRTLLLHAVAFFLERNGFSKTLKKFRSEAQIE-GSSK 79
           MKQSNNHTQAPNSADE LSLHPQHRTLLLHAVAFFLERNGFSKTLKKFRSEAQI+ GSSK
Sbjct: 1   MKQSNNHTQAPNSADEALSLHPQHRTLLLHAVAFFLERNGFSKTLKKFRSEAQIQKGSSK 60

Query: 80  DLLLSLEEMCHKHLKKCSQAITTENKPDEETVKEVADGRVPEAQEEPTKKSKDKKKIKKN 139
           DLLLSLEEMCHKHLKKCSQAITTENKPDEETVKEVADGRVPEAQEE TKKSKDKKKIKKN
Sbjct: 61  DLLLSLEEMCHKHLKKCSQAITTENKPDEETVKEVADGRVPEAQEERTKKSKDKKKIKKN 120

Query: 140 AVPETHVDAAEKEKSEPV--ESLKNSNDTTVHDEAGKKSKDKKKKKNKEKLETVATISND 199
           AVPE +VDAAE EKSEPV  ESL N N TTVHDEAGKKSKDKKKKKNKEKLET ATISND
Sbjct: 121 AVPEMYVDAAENEKSEPVHAESLNNFNGTTVHDEAGKKSKDKKKKKNKEKLETAATISND 180

Query: 200 IAVDSIGLNGDVASLEEKVVKSKTKKKKDGRHSSHENSNQLNDGTNILNEEEQNDISKKR 259
           IAVDSIGLNGDVASLEEKVVKSKTKKKKDGRH S E   +     N+   +EQNDISKKR
Sbjct: 181 IAVDSIGLNGDVASLEEKVVKSKTKKKKDGRHLSDEKEKE----QNVSVVDEQNDISKKR 240

Query: 260 KRLASEDNDIPAVNEKATEDVKRRKLECSKGGSDSVQSTKVDVDAGNRSTINEVSPQTNE 319
           KRLASEDNDIPAV+EK TEDVKRRKLECSKGG+ S+QSTKVDVDAGNRS INE+S QTNE
Sbjct: 241 KRLASEDNDIPAVDEKETEDVKRRKLECSKGGNVSLQSTKVDVDAGNRSAINELSQQTNE 300

Query: 320 YVEKTAEKTSTKKAFKKHSNGSTEPKTINPFQRVKVDAVTFADEKLADNSYWAKGGAESG 379
            VEKTAEKTSTKKAFKKHSNGSTEPKTIN FQRVKVDAVTFADEKLADNSYWAKGGAESG
Sbjct: 301 SVEKTAEKTSTKKAFKKHSNGSTEPKTINAFQRVKVDAVTFADEKLADNSYWAKGGAESG 360

Query: 380 YGAKAQEVLGQVKG--------RGFRHEKTKKKRGSYRGGVIDLQSHSVKFNYSDDD 426
           YGAKAQEVLGQ K         R FRHEKTKKKRGSYRGGVIDLQSHSVKFNYSDDD
Sbjct: 361 YGAKAQEVLGQKKALDSNLSCIRDFRHEKTKKKRGSYRGGVIDLQSHSVKFNYSDDD 413

BLAST of CsaV3_3G012070 vs. ExPASy TrEMBL
Match: A0A6J1JJ58 (nucleolar and coiled-body phosphoprotein 1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111484917 PE=4 SV=1)

HSP 1 Score: 560.5 bits (1443), Expect = 6.2e-156
Identity = 333/437 (76.20%), Postives = 360/437 (82.38%), Query Frame = 0

Query: 8   FKPRQVLLSHHTMKQSNNHTQAPNSADETLSLHPQHRTLLLHAVAFFLERNGFSKTLKKF 67
           FKPRQVLLSHH MKQ N+  Q P SADE  SLHP+ RTLLLHAVAFFLE NGFSKTLKKF
Sbjct: 16  FKPRQVLLSHHAMKQRND-AQTPKSADEAASLHPEQRTLLLHAVAFFLEHNGFSKTLKKF 75

Query: 68  RSEAQIE-GSSKDLLLSLEEMCHKHLKKCSQAITTENKPDEETVKEVADGRVPEAQEEPT 127
           RSEAQIE  SSK+LLLSLEEMCHKH KK SQA+T +NKPDEE V EV D RVPE QEEP 
Sbjct: 76  RSEAQIEKDSSKELLLSLEEMCHKHFKKFSQAVTPQNKPDEEIVTEVTDDRVPEEQEEPA 135

Query: 128 KKSKDKKKIKKNAVPETHVDAAEKEKSEP--VESLKNSN------DTTVHDEAGKKSKDK 187
           KKSKDKKKIKKN V       A+KEKSEP  VESLKNSN       TTVH+EAGKKSKDK
Sbjct: 136 KKSKDKKKIKKNTV-------ADKEKSEPAHVESLKNSNGTEPSEGTTVHEEAGKKSKDK 195

Query: 188 KKKKNKEKLETVATISNDI-------AVDSIGLNGDVASLEEKVVKSKTKKKKDGRHSSH 247
           KKKKNKEK++TVATI +D+       AVDS GLNG+VA+L+EKVVKSK+KKKKDGRH S 
Sbjct: 196 KKKKNKEKIKTVATIPDDVTVARDSQAVDSNGLNGNVATLDEKVVKSKSKKKKDGRHLSD 255

Query: 248 ENSNQLNDGTNILNEEEQNDISKKRKRLASEDN---DIPAVNEKATEDVKRRKLECSKGG 307
            NSNQLNDGT +L+EEE ND SKKRKRLASEDN   D  AV++K TEDVKRRKLE SKG 
Sbjct: 256 TNSNQLNDGTKMLHEEEHNDNSKKRKRLASEDNDSHDSHAVDDKETEDVKRRKLEGSKGC 315

Query: 308 SDSVQSTKVDVDAGNRSTINEVSPQTNEYVEKTAEKTSTKKAFKKHSNGSTEPKTINPFQ 367
           +D V STKVDV        NE+S +T+  VEKTAEKTS+KK +KK SNGSTEPKTIN FQ
Sbjct: 316 NDGVLSTKVDV--------NELSQETD--VEKTAEKTSSKKPWKKSSNGSTEPKTINAFQ 375

Query: 368 RVKVDAVTFADEKLADNSYWAKGGAESGYGAKAQEVLGQVKGRGFRHEKTKKKRGSYRGG 426
           RVKVDAVTFADEKLADNSYWAKGGAE+GYGAKAQEVLGQVKGRGFRHEKTKKKRGSYRGG
Sbjct: 376 RVKVDAVTFADEKLADNSYWAKGGAETGYGAKAQEVLGQVKGRGFRHEKTKKKRGSYRGG 434

BLAST of CsaV3_3G012070 vs. TAIR 10
Match: AT5G57120.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif (InterPro:IPR006594), SRP40, C-terminal (InterPro:IPR007718); Has 101969 Blast hits to 55488 proteins in 2506 species: Archae - 424; Bacteria - 13843; Metazoa - 37674; Fungi - 9726; Plants - 4941; Viruses - 569; Other Eukaryotes - 34792 (source: NCBI BLink). )

HSP 1 Score: 159.8 bits (403), Expect = 4.7e-39
Identity = 152/393 (38.68%), Postives = 198/393 (50.38%), Query Frame = 0

Query: 35  ETLSLHPQHRTLLLHAVAFFLERNGFSKTLKKFRSEAQIEGSSKDLLL-SLEEMCHKHLK 94
           +T +L  + + LLL +VA +LER GFSK  KK  SEA+IE    +  L  LEE+  + L 
Sbjct: 6   KTSALESEQKALLLRSVAQYLERCGFSKCFKKLLSEAEIEKKELNTSLPDLEEIFSEFLN 65

Query: 95  KCSQAITTENKPDEETVKEVADGRVPEAQEEPTKKSKDKKKIKKNAVPETHVDAAEKEKS 154
           K           +   V+ V          E  KK K KKK K     ET V+  E+EK 
Sbjct: 66  KRDHEAAANGNTEANVVEAV----------ENVKKDKKKKKNK-----ETKVEVTEEEKV 125

Query: 155 EPVESLKNSNDTTVHDEAGKKSKDKKKKKNKEKLETVATISNDIAVDSIGLNGDVASLEE 214
           +         D  + D  G K K KKKK+ K K+     +    AV   G+         
Sbjct: 126 K-------ETDAVIED--GVKEK-KKKKETKVKVTEEEKVKETDAVIEDGV--------- 185

Query: 215 KVVKSKTKKKKDGRHSSHENSNQLNDGTNILNEEEQNDISKKRKRLASEDNDIPAVNEKA 274
                K KKKK  +  S E             ++++  +SKKRKR  SE  +     E  
Sbjct: 186 -----KEKKKKKSKSKSVE------------ADDDKEKVSKKRKR--SEPEETKEETEDD 245

Query: 275 TEDVKRRKLECSKGGSDSVQSTKVDVDAGNRST-INEVSPQTNEYVEKTAEKTSTKKAFK 334
            E+ KRRK E             V+ D G + T + E   + N   EK+  K++ +K+ K
Sbjct: 246 DEESKRRKKE----------ENVVENDEGVQETPVKETETKENGNAEKSETKSTNQKSGK 305

Query: 335 KHSNGSTEPKTINPFQRVKVDAVTFADEKLADNSYWAKGGAESGYGAKAQEVLGQVKGRG 394
             SN S EPK   PFQRV VD + + +     NSY++KGGAE GYG KAQEVLGQV+GR 
Sbjct: 306 GLSN-SKEPK--KPFQRVNVDEIVYTEN---SNSYYSKGGAEIGYGLKAQEVLGQVRGRD 329

Query: 395 FRHEKTKKKRGSYRGGVIDLQSHSVKFNYSDDD 426
           FRHEKTKKKRGSYRGG+ID +SHS KFN SDD+
Sbjct: 366 FRHEKTKKKRGSYRGGLIDQESHSTKFNNSDDE 329

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_011650931.12.8e-227100.00nucleolar and coiled-body phosphoprotein 1 isoform X2 [Cucumis sativus] >KAE8650... [more]
XP_004134062.16.9e-22699.77nucleolar and coiled-body phosphoprotein 1 isoform X1 [Cucumis sativus][more]
XP_011650933.12.0e-22599.76nucleolar and coiled-body phosphoprotein 1 isoform X4 [Cucumis sativus][more]
XP_011650932.14.9e-22499.53nucleolar and coiled-body phosphoprotein 1 isoform X3 [Cucumis sativus][more]
XP_008438518.17.2e-19990.65PREDICTED: nucleolar and coiled-body phosphoprotein 1 [Cucumis melo][more]
Match NameE-valueIdentityDescription
E9Q5C94.8e-1228.16Nucleolar and coiled-body phosphoprotein 1 OS=Mus musculus OX=10090 GN=Nolc1 PE=... [more]
P417771.2e-1028.53Nucleolar and coiled-body phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Nolc... [more]
Q149781.7e-0926.13Nucleolar and coiled-body phosphoprotein 1 OS=Homo sapiens OX=9606 GN=NOLC1 PE=1... [more]
P325831.1e-0523.56Suppressor protein SRP40 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c... [more]
Q9P7859.7e-0523.94LisH domain-containing protein C1711.05 OS=Schizosaccharomyces pombe (strain 972... [more]
Match NameE-valueIdentityDescription
A0A1S3AWK13.5e-19990.65nucleolar and coiled-body phosphoprotein 1 OS=Cucumis melo OX=3656 GN=LOC1034835... [more]
A0A0A0L7381.0e-19889.88LisH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G135020 PE=4 S... [more]
A0A5D3D1D66.8e-18790.22Nucleolar and coiled-body phosphoprotein 1 OS=Cucumis melo var. makuwa OX=119469... [more]
A0A5A7U1N02.7e-18388.01Nucleolar and coiled-body phosphoprotein 1 OS=Cucumis melo var. makuwa OX=119469... [more]
A0A6J1JJ586.2e-15676.20nucleolar and coiled-body phosphoprotein 1-like isoform X2 OS=Cucurbita maxima O... [more]
Match NameE-valueIdentityDescription
AT5G57120.14.7e-3938.68FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 245..265
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 287..320
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 388..407
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 103..189
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 248..286
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 233..247
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 103..345
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 321..336
NoneNo IPR availablePANTHERPTHR23216:SF2LIS1 HOMOLOGY MOTIF, SRP40-RELATEDcoord: 7..424
NoneNo IPR availablePANTHERPTHR23216NUCLEOLAR AND COILED-BODY PHOSPHOPROTEIN 1coord: 7..424
IPR006594LIS1 homology motifSMARTSM00667Lishcoord: 43..75
e-value: 0.0081
score: 25.4
IPR006594LIS1 homology motifPROSITEPS50896LISHcoord: 43..75
score: 9.094254
IPR007718Srp40, C-terminalPFAMPF05022SRP40_Ccoord: 346..419
e-value: 5.3E-28
score: 97.7

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G012070.1CsaV3_3G012070.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding