CsaV3_3G012050 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G012050
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Malate dehydrogenase
Location	chr3: 9316976 .. 9318230 (+)
RNA-Seq Expression	CsaV3_3G012050
Synteny	CsaV3_3G012050

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CATGGATGCATACGAGCATCAGCCAAGAAGGATGCCTGAATTAGAGATGAGTTGTGACAAATGAGGGACTAAAAATGATCTATTTTTTTAACCCAATTAAATTGATGATTGAAGCTCTTCATTTGAAAAGAAATGGATTCTTTACAACTACGCTGCTTTCTAAAGAAGAATCAATTATTTGATCTCTCCATAAAAACCATCCGTTCATGATTGTCGACTAAACCCATATTCTCTCTTCTTCTTCTTCTTCTTTCTCTCAATTCTCTCTCTCTCTCCAATGTCTCGCATAACAATGGAGAAGAAGCTCCGTACAGCCAAAAAAGCATGGAAGAAACTAACCAAATCATTACAATCCAAATTCCACGCCCTTAACATCTCCAAATCCATCAACACAGCCAAGCGCCGTCTCATCTCCGCCGTTCAAACCTCCCTCCGTCTCCTAATTCCCTCCAAATTCCACCGCCGCCTTCTCCGCCGTAAATCATCGCCTTCTTCCTATTACCACCGCAATCAAAATAAAAATCAGTTTCTCCGCCATTACGACGACCAACACTTTCACAATCCAAACAACTTCGCCGCAATCCACATCGACGAGCTCTTCCCAGATCTGTCGGACCCAATTGCAAAGCGATCCGGCGGTGAAATTACAGAGACGAGCAGAGGAAAAGAAGTAATGAAAGAGGCCGAAAAGGATAATCATGATGAGGAGACGAGTATTTACAGTATTGAAGATGCTTGGAAAATCGTGGTGGCTTCATCGCCGCATCTTCGGCCGGTGGATGAACGAGCGGAGGAATTCATAAGAAAATTCCGGCGAGAGATTATTCTTGAGAAGGAGAAATCGCTTCTTGAATTTGAACGGATGTTGGCTCGAAGTGCCGCTTGATATTTGTGAATTCGTTTGGATTATACATAAAATTCATAAATTATGGATATTGGTTTCCATGTTTACAGGTAAAAAAAATACATAATAAGATTGACAATTTTTTTTTATAAAAAGGTTTCCTTTCTTACGGTGTGGTTTGAATTTGAATGTATAGTGTATAGAAGATACTATGAAGTGATTTTTTCGTTTTGTTTTGTGATCTCCATAAATTTTTAGGGGAGATATTCTGATGTATTTACTGATTTTAATTTCATGTATGTTATGATCTACCAATGAAGCTTCAATTTCATATAACATTTTAAATTAAATTTTATAAGATATAATCTCTCTGTTAAATTTTTTTTGGTAAAGAGTTGCTTTTAGATTAAA

mRNA sequence

ATGTCTCGCATAACAATGGAGAAGAAGCTCCGTACAGCCAAAAAAGCATGGAAGAAACTAACCAAATCATTACAATCCAAATTCCACGCCCTTAACATCTCCAAATCCATCAACACAGCCAAGCGCCGTCTCATCTCCGCCGTTCAAACCTCCCTCCGTCTCCTAATTCCCTCCAAATTCCACCGCCGCCTTCTCCGCCGTAAATCATCGCCTTCTTCCTATTACCACCGCAATCAAAATAAAAATCAGTTTCTCCGCCATTACGACGACCAACACTTTCACAATCCAAACAACTTCGCCGCAATCCACATCGACGAGCTCTTCCCAGATCTGTCGGACCCAATTGCAAAGCGATCCGGCGGTGAAATTACAGAGACGAGCAGAGGAAAAGAAGTAATGAAAGAGGCCGAAAAGGATAATCATGATGAGGAGACGAGTATTTACAGTATTGAAGATGCTTGGAAAATCGTGGTGGCTTCATCGCCGCATCTTCGGCCGGTGGATGAACGAGCGGAGGAATTCATAAGAAAATTCCGGCGAGAGATTATTCTTGAGAAGGAGAAATCGCTTCTTGAATTTGAACGGATGTTGGCTCGAAGTGCCGCTTGA

Coding sequence (CDS)

ATGTCTCGCATAACAATGGAGAAGAAGCTCCGTACAGCCAAAAAAGCATGGAAGAAACTAACCAAATCATTACAATCCAAATTCCACGCCCTTAACATCTCCAAATCCATCAACACAGCCAAGCGCCGTCTCATCTCCGCCGTTCAAACCTCCCTCCGTCTCCTAATTCCCTCCAAATTCCACCGCCGCCTTCTCCGCCGTAAATCATCGCCTTCTTCCTATTACCACCGCAATCAAAATAAAAATCAGTTTCTCCGCCATTACGACGACCAACACTTTCACAATCCAAACAACTTCGCCGCAATCCACATCGACGAGCTCTTCCCAGATCTGTCGGACCCAATTGCAAAGCGATCCGGCGGTGAAATTACAGAGACGAGCAGAGGAAAAGAAGTAATGAAAGAGGCCGAAAAGGATAATCATGATGAGGAGACGAGTATTTACAGTATTGAAGATGCTTGGAAAATCGTGGTGGCTTCATCGCCGCATCTTCGGCCGGTGGATGAACGAGCGGAGGAATTCATAAGAAAATTCCGGCGAGAGATTATTCTTGAGAAGGAGAAATCGCTTCTTGAATTTGAACGGATGTTGGCTCGAAGTGCCGCTTGA

Protein sequence

MSRITMEKKLRTAKKAWKKLTKSLQSKFHALNISKSINTAKRRLISAVQTSLRLLIPSKFHRRLLRRKSSPSSYYHRNQNKNQFLRHYDDQHFHNPNNFAAIHIDELFPDLSDPIAKRSGGEITETSRGKEVMKEAEKDNHDEETSIYSIEDAWKIVVASSPHLRPVDERAEEFIRKFRREIILEKEKSLLEFERMLARSAA*

Homology

[Close]

BLAST of CsaV3_3G012050 vs. NCBI nr
Match: XP_004134061.1 (uncharacterized protein LOC101208604 [Cucumis sativus] >KGN56852.1 hypothetical protein Csa_010392 [Cucumis sativus])

HSP 1 Score: 380.9 bits (977), Expect = 6.6e-102
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0


Query: 1   MSRITMEKKLRTAKKAWKKLTKSLQSKFHALNISKSINTAKRRLISAVQTSLRLLIPSKF 60
           MSRITMEKKLRTAKKAWKKLTKSLQSKFHALNISKSINTAKRRLISAVQTSLRLLIPSKF
Sbjct: 1   MSRITMEKKLRTAKKAWKKLTKSLQSKFHALNISKSINTAKRRLISAVQTSLRLLIPSKF 60

Query: 61  HRRLLRRKSSPSSYYHRNQNKNQFLRHYDDQHFHNPNNFAAIHIDELFPDLSDPIAKRSG 120
           HRRLLRRKSSPSSYYHRNQNKNQFLRHYDDQHFHNPNNFAAIHIDELFPDLSDPIAKRSG
Sbjct: 61  HRRLLRRKSSPSSYYHRNQNKNQFLRHYDDQHFHNPNNFAAIHIDELFPDLSDPIAKRSG 120

Query: 121 GEITETSRGKEVMKEAEKDNHDEETSIYSIEDAWKIVVASSPHLRPVDERAEEFIRKFRR 180
           GEITETSRGKEVMKEAEKDNHDEETSIYSIEDAWKIVVASSPHLRPVDERAEEFIRKFRR
Sbjct: 121 GEITETSRGKEVMKEAEKDNHDEETSIYSIEDAWKIVVASSPHLRPVDERAEEFIRKFRR 180

Query: 181 EIILEKEKSLLEFERMLARSAA 203
           EIILEKEKSLLEFERMLARSAA
Sbjct: 181 EIILEKEKSLLEFERMLARSAA 202

[Close]

BLAST of CsaV3_3G012050 vs. NCBI nr
Match: XP_008438516.1 (PREDICTED: uncharacterized protein LOC103483588 [Cucumis melo])

HSP 1 Score: 350.5 bits (898), Expect = 9.6e-93
Identity = 189/203 (93.10%), Postives = 196/203 (96.55%), Query Frame = 0


Query: 1   MSRITMEKKLRTAKKAWKKLTKSLQSKFHALNISKSINTAKRRLISAVQTSLRLLIPSKF 60
           MSR TMEKKLRTA+KAWKKLTKSL+SKFHALNISKSINTAKRRL+SAVQTSLR+LIPSKF
Sbjct: 1   MSRTTMEKKLRTARKAWKKLTKSLKSKFHALNISKSINTAKRRLVSAVQTSLRILIPSKF 60

Query: 61  HRRLLRRKSSPSSY-YHRNQNKNQFLRHYDDQHFHNPNNFAAIHIDELFPDLSDPIAKRS 120
           HRRLLR KSSPSSY YHRNQNKNQ LRHYDDQHFHNPNNFAAIHIDELFPDL DPIAKRS
Sbjct: 61  HRRLLRPKSSPSSYNYHRNQNKNQILRHYDDQHFHNPNNFAAIHIDELFPDLPDPIAKRS 120

Query: 121 GGEITETSRGKEVMKEAEKDNHDEETSIYSIEDAWKIVVASSPHLRPVDERAEEFIRKFR 180
           G EITETSRGKEVMKE EKD+H++ETSIYSIEDAWKIVVASSPHLRPVDERAEEFIRKFR
Sbjct: 121 GAEITETSRGKEVMKE-EKDDHEQETSIYSIEDAWKIVVASSPHLRPVDERAEEFIRKFR 180

Query: 181 REIILEKEKSLLEFERMLARSAA 203
           REIILEKEKSLLEFERMLARSAA
Sbjct: 181 REIILEKEKSLLEFERMLARSAA 202

[Close]

BLAST of CsaV3_3G012050 vs. NCBI nr
Match: KAA0049248.1 (uncharacterized protein E6C27_scaffold171G004880 [Cucumis melo var. makuwa] >TYK17310.1 uncharacterized protein E5676_scaffold434G001650 [Cucumis melo var. makuwa])

HSP 1 Score: 342.8 bits (878), Expect = 2.0e-90
Identity = 184/198 (92.93%), Postives = 192/198 (96.97%), Query Frame = 0


Query: 6   MEKKLRTAKKAWKKLTKSLQSKFHALNISKSINTAKRRLISAVQTSLRLLIPSKFHRRLL 65
           MEKKLRTA+KAWKKLTKSL+SKFHALNISKSINTAKRRL+SAVQTSLR+LIPSKFHRRLL
Sbjct: 1   MEKKLRTARKAWKKLTKSLKSKFHALNISKSINTAKRRLVSAVQTSLRILIPSKFHRRLL 60

Query: 66  RRKSSPSSY-YHRNQNKNQFLRHYDDQHFHNPNNFAAIHIDELFPDLSDPIAKRSGGEIT 125
           R +SSPSSY YHRNQNKNQ LRHYDDQHFHNPNNFAAIHIDELFPDL DPIAKRSG EIT
Sbjct: 61  RPRSSPSSYNYHRNQNKNQILRHYDDQHFHNPNNFAAIHIDELFPDLPDPIAKRSGAEIT 120

Query: 126 ETSRGKEVMKEAEKDNHDEETSIYSIEDAWKIVVASSPHLRPVDERAEEFIRKFRREIIL 185
           ETSRGKEVMKE EKD+H++ETSIYSIEDAWKIVVASSPHLRPVDERAEEFIRKFRREIIL
Sbjct: 121 ETSRGKEVMKE-EKDDHEQETSIYSIEDAWKIVVASSPHLRPVDERAEEFIRKFRREIIL 180

Query: 186 EKEKSLLEFERMLARSAA 203
           EKEKSLLEFERMLARSAA
Sbjct: 181 EKEKSLLEFERMLARSAA 197

[Close]

BLAST of CsaV3_3G012050 vs. NCBI nr
Match: XP_038903123.1 (uncharacterized protein LOC120089795 [Benincasa hispida])

HSP 1 Score: 306.6 bits (784), Expect = 1.6e-79
Identity = 173/203 (85.22%), Postives = 181/203 (89.16%), Query Frame = 0


Query: 1   MSRITMEKKLRTAKKAWKKLTKSLQSKFHALNISKSINTAKRRLISAVQTSLRLLIPSKF 60
           MSR TMEKKLRTAKKAWKKLTKSLQSKFHAL+ISKSINTA RRL SAVQ SLRLLIPSKF
Sbjct: 1   MSRSTMEKKLRTAKKAWKKLTKSLQSKFHALHISKSINTATRRLTSAVQRSLRLLIPSKF 60

Query: 61  HRRLLRRKSSPSSYYHRNQNKNQ-FLRHYDDQHFHNPNNFAAIHIDELFPDLSDPIAKRS 120
            RRLL  KSSPS YY RNQN+NQ  + H  DQH HNPNNFAAIHIDELF +L +PIAKRS
Sbjct: 61  RRRLLSPKSSPSPYYRRNQNQNQNQILHQYDQHLHNPNNFAAIHIDELFAELPEPIAKRS 120

Query: 121 GGEITETSRGKEVMKEAEKDNHDEETSIYSIEDAWKIVVASSPHLRPVDERAEEFIRKFR 180
           GGEITETSRGKEVMKE +    DEETS+YSIEDAWKIVVASSPHLRPVDERAEEFIRKFR
Sbjct: 121 GGEITETSRGKEVMKEEK----DEETSVYSIEDAWKIVVASSPHLRPVDERAEEFIRKFR 180

Query: 181 REIILEKEKSLLEFERMLARSAA 203
           REIILEKEKSLLEFE+MLARSAA
Sbjct: 181 REIILEKEKSLLEFEQMLARSAA 199

[Close]

BLAST of CsaV3_3G012050 vs. NCBI nr
Match: XP_022975067.1 (uncharacterized protein LOC111474038 [Cucurbita maxima])

HSP 1 Score: 246.5 bits (628), Expect = 2.0e-61
Identity = 147/201 (73.13%), Postives = 161/201 (80.10%), Query Frame = 0


Query: 1   MSRITMEKKLRTAKKAWKKLTKSLQSKFHALNISKSINTAKRRLISAVQTSLRLLIPSKF 60
           MSR  MEKKLRTAKKAWKKLT +L+ KFHAL IS+SIN A RRL S VQ SL LL PSKF
Sbjct: 1   MSRTKMEKKLRTAKKAWKKLTNTLRFKFHALKISRSINIATRRLNSVVQRSLSLLFPSKF 60

Query: 61  HRRLLRRKSSPSSYYHRNQNKNQFLRHYDDQHFHNPNNFAAIHIDELFPDLSDPIAKRSG 120
            RRLLRRKSSPSSYY R+Q  NQ+L+ Y D+H  NPNNFA IHIDELF D + PIA    
Sbjct: 61  RRRLLRRKSSPSSYYRRDQ--NQYLQQY-DEHVQNPNNFAPIHIDELFADPAAPIA---- 120

Query: 121 GEITETSRGKEVMKEAEKDNHDEETSIYSIEDAWKIVVASSPHLRPVDERAEEFIRKFRR 180
               ETSRGKEVM+E      ++ETS+ SIEDAWKIVVASSPHLRPVDERAEEFIRKFR 
Sbjct: 121 ----ETSRGKEVMEE------EKETSVNSIEDAWKIVVASSPHLRPVDERAEEFIRKFRE 180

Query: 181 EIILEKEKSLLEFERMLARSA 202
           EIILEKEKSLLEF++MLARSA
Sbjct: 181 EIILEKEKSLLEFQQMLARSA 184

[Close]

BLAST of CsaV3_3G012050 vs. ExPASy TrEMBL
Match: A0A0A0L896 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G135000 PE=4 SV=1)

HSP 1 Score: 380.9 bits (977), Expect = 3.2e-102
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0


Query: 1   MSRITMEKKLRTAKKAWKKLTKSLQSKFHALNISKSINTAKRRLISAVQTSLRLLIPSKF 60
           MSRITMEKKLRTAKKAWKKLTKSLQSKFHALNISKSINTAKRRLISAVQTSLRLLIPSKF
Sbjct: 1   MSRITMEKKLRTAKKAWKKLTKSLQSKFHALNISKSINTAKRRLISAVQTSLRLLIPSKF 60

Query: 61  HRRLLRRKSSPSSYYHRNQNKNQFLRHYDDQHFHNPNNFAAIHIDELFPDLSDPIAKRSG 120
           HRRLLRRKSSPSSYYHRNQNKNQFLRHYDDQHFHNPNNFAAIHIDELFPDLSDPIAKRSG
Sbjct: 61  HRRLLRRKSSPSSYYHRNQNKNQFLRHYDDQHFHNPNNFAAIHIDELFPDLSDPIAKRSG 120

Query: 121 GEITETSRGKEVMKEAEKDNHDEETSIYSIEDAWKIVVASSPHLRPVDERAEEFIRKFRR 180
           GEITETSRGKEVMKEAEKDNHDEETSIYSIEDAWKIVVASSPHLRPVDERAEEFIRKFRR
Sbjct: 121 GEITETSRGKEVMKEAEKDNHDEETSIYSIEDAWKIVVASSPHLRPVDERAEEFIRKFRR 180

Query: 181 EIILEKEKSLLEFERMLARSAA 203
           EIILEKEKSLLEFERMLARSAA
Sbjct: 181 EIILEKEKSLLEFERMLARSAA 202

[Close]

BLAST of CsaV3_3G012050 vs. ExPASy TrEMBL
Match: A0A1S3AW79 (uncharacterized protein LOC103483588 OS=Cucumis melo OX=3656 GN=LOC103483588 PE=4 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 4.7e-93
Identity = 189/203 (93.10%), Postives = 196/203 (96.55%), Query Frame = 0


Query: 1   MSRITMEKKLRTAKKAWKKLTKSLQSKFHALNISKSINTAKRRLISAVQTSLRLLIPSKF 60
           MSR TMEKKLRTA+KAWKKLTKSL+SKFHALNISKSINTAKRRL+SAVQTSLR+LIPSKF
Sbjct: 1   MSRTTMEKKLRTARKAWKKLTKSLKSKFHALNISKSINTAKRRLVSAVQTSLRILIPSKF 60

Query: 61  HRRLLRRKSSPSSY-YHRNQNKNQFLRHYDDQHFHNPNNFAAIHIDELFPDLSDPIAKRS 120
           HRRLLR KSSPSSY YHRNQNKNQ LRHYDDQHFHNPNNFAAIHIDELFPDL DPIAKRS
Sbjct: 61  HRRLLRPKSSPSSYNYHRNQNKNQILRHYDDQHFHNPNNFAAIHIDELFPDLPDPIAKRS 120

Query: 121 GGEITETSRGKEVMKEAEKDNHDEETSIYSIEDAWKIVVASSPHLRPVDERAEEFIRKFR 180
           G EITETSRGKEVMKE EKD+H++ETSIYSIEDAWKIVVASSPHLRPVDERAEEFIRKFR
Sbjct: 121 GAEITETSRGKEVMKE-EKDDHEQETSIYSIEDAWKIVVASSPHLRPVDERAEEFIRKFR 180

Query: 181 REIILEKEKSLLEFERMLARSAA 203
           REIILEKEKSLLEFERMLARSAA
Sbjct: 181 REIILEKEKSLLEFERMLARSAA 202

[Close]

BLAST of CsaV3_3G012050 vs. ExPASy TrEMBL
Match: A0A5D3D117 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G001650 PE=4 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 9.7e-91
Identity = 184/198 (92.93%), Postives = 192/198 (96.97%), Query Frame = 0


Query: 6   MEKKLRTAKKAWKKLTKSLQSKFHALNISKSINTAKRRLISAVQTSLRLLIPSKFHRRLL 65
           MEKKLRTA+KAWKKLTKSL+SKFHALNISKSINTAKRRL+SAVQTSLR+LIPSKFHRRLL
Sbjct: 1   MEKKLRTARKAWKKLTKSLKSKFHALNISKSINTAKRRLVSAVQTSLRILIPSKFHRRLL 60

Query: 66  RRKSSPSSY-YHRNQNKNQFLRHYDDQHFHNPNNFAAIHIDELFPDLSDPIAKRSGGEIT 125
           R +SSPSSY YHRNQNKNQ LRHYDDQHFHNPNNFAAIHIDELFPDL DPIAKRSG EIT
Sbjct: 61  RPRSSPSSYNYHRNQNKNQILRHYDDQHFHNPNNFAAIHIDELFPDLPDPIAKRSGAEIT 120

Query: 126 ETSRGKEVMKEAEKDNHDEETSIYSIEDAWKIVVASSPHLRPVDERAEEFIRKFRREIIL 185
           ETSRGKEVMKE EKD+H++ETSIYSIEDAWKIVVASSPHLRPVDERAEEFIRKFRREIIL
Sbjct: 121 ETSRGKEVMKE-EKDDHEQETSIYSIEDAWKIVVASSPHLRPVDERAEEFIRKFRREIIL 180

Query: 186 EKEKSLLEFERMLARSAA 203
           EKEKSLLEFERMLARSAA
Sbjct: 181 EKEKSLLEFERMLARSAA 197

[Close]

BLAST of CsaV3_3G012050 vs. ExPASy TrEMBL
Match: A0A6J1IC02 (uncharacterized protein LOC111474038 OS=Cucurbita maxima OX=3661 GN=LOC111474038 PE=4 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 9.5e-62
Identity = 147/201 (73.13%), Postives = 161/201 (80.10%), Query Frame = 0


Query: 1   MSRITMEKKLRTAKKAWKKLTKSLQSKFHALNISKSINTAKRRLISAVQTSLRLLIPSKF 60
           MSR  MEKKLRTAKKAWKKLT +L+ KFHAL IS+SIN A RRL S VQ SL LL PSKF
Sbjct: 1   MSRTKMEKKLRTAKKAWKKLTNTLRFKFHALKISRSINIATRRLNSVVQRSLSLLFPSKF 60

Query: 61  HRRLLRRKSSPSSYYHRNQNKNQFLRHYDDQHFHNPNNFAAIHIDELFPDLSDPIAKRSG 120
            RRLLRRKSSPSSYY R+Q  NQ+L+ Y D+H  NPNNFA IHIDELF D + PIA    
Sbjct: 61  RRRLLRRKSSPSSYYRRDQ--NQYLQQY-DEHVQNPNNFAPIHIDELFADPAAPIA---- 120

Query: 121 GEITETSRGKEVMKEAEKDNHDEETSIYSIEDAWKIVVASSPHLRPVDERAEEFIRKFRR 180
               ETSRGKEVM+E      ++ETS+ SIEDAWKIVVASSPHLRPVDERAEEFIRKFR 
Sbjct: 121 ----ETSRGKEVMEE------EKETSVNSIEDAWKIVVASSPHLRPVDERAEEFIRKFRE 180

Query: 181 EIILEKEKSLLEFERMLARSA 202
           EIILEKEKSLLEF++MLARSA
Sbjct: 181 EIILEKEKSLLEFQQMLARSA 184

[Close]

BLAST of CsaV3_3G012050 vs. ExPASy TrEMBL
Match: A0A6J1IAE8 (uncharacterized protein LOC111473184 OS=Cucurbita maxima OX=3661 GN=LOC111473184 PE=4 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 1.4e-60
Identity = 144/196 (73.47%), Postives = 158/196 (80.61%), Query Frame = 0


Query: 6   MEKKLRTAKKAWKKLTKSLQSKFHALNISKSINTAKRRLISAVQTSLRLLIPSKFHRRLL 65
           MEKKLRTAKKAWKKLT +L+ KFHAL IS+SIN A RRL S VQ SL LL PSKF RRLL
Sbjct: 1   MEKKLRTAKKAWKKLTNTLRFKFHALKISRSINIATRRLNSVVQRSLSLLFPSKFRRRLL 60

Query: 66  RRKSSPSSYYHRNQNKNQFLRHYDDQHFHNPNNFAAIHIDELFPDLSDPIAKRSGGEITE 125
           RRKSSPSSYY R+Q  NQ+L+ Y D+H  NPNNFA IHIDELF D + PIA        E
Sbjct: 61  RRKSSPSSYYRRDQ--NQYLQQY-DEHVQNPNNFAPIHIDELFADPAAPIA--------E 120

Query: 126 TSRGKEVMKEAEKDNHDEETSIYSIEDAWKIVVASSPHLRPVDERAEEFIRKFRREIILE 185
           TSRGKEVM+E      ++ETS+ SIEDAWKIVVASSPHLRPVDERAEEFIRKFR EIILE
Sbjct: 121 TSRGKEVMEE------EKETSVNSIEDAWKIVVASSPHLRPVDERAEEFIRKFREEIILE 179

Query: 186 KEKSLLEFERMLARSA 202
           KEKSLLEF++MLARSA
Sbjct: 181 KEKSLLEFQQMLARSA 179

[Close]

BLAST of CsaV3_3G012050 vs. TAIR 10
Match: AT4G14380.1 (unknown protein; Has 22 Blast hits to 22 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 1; Plants - 18; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 91.3 bits (225), Expect = 9.8e-19
Identity = 75/206 (36.41%), Postives = 113/206 (54.85%), Query Frame = 0


Query: 1   MSRITMEKKLRTAKKAWKKLTKSLQSKFHALNISKSINTAKRRLISAVQTSLRLLIPSKF 60
           M+ +  +KK   AK+AWK  T  ++SKF  + I+ S+  +  R+   +  S RL++P  F
Sbjct: 1   MASLRQKKKQNPAKRAWKNFTNMVKSKFRDMEIASSVRESTARVFRFI--SRRLIVP--F 60

Query: 61  HRRLLRRKSSPSSYYH-RNQNKNQFLRHYDDQHFHNPNNFAAIHIDE---LFPDLSDPIA 120
             R L+  S    YY+ RNQ+  QFL ++  +    P      + DE   ++   S    
Sbjct: 61  RTRYLQNNSYTDKYYYSRNQSSRQFL-NFISRSLTKPKRRQYGYDDEYSQIYQYQSQSRG 120

Query: 121 KRSGGEITETSRGKEVMKEAEKDNHDEETSIY-SIEDAWKIVVASSPHLRPVDERAEEFI 180
           + + G      R  E  KE E++  +    I  S+EDAW+ VVA+SPHL+ V+ERA+EFI
Sbjct: 121 EGTSGSKENVVRRIEEQKEEEEEEEEGMPEIADSMEDAWRRVVAASPHLQ-VNERADEFI 180

Query: 181 RKFRREIILEKEKSLLEFERMLARSA 202
            KFR  + +EKE+S LEF+  L RSA
Sbjct: 181 YKFRESMKMEKERSFLEFQERLKRSA 200

The following BLAST results are available for this feature:

BLAST of CsaV3_3G012050 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004134061.1	6.6e-102	100.00	uncharacterized protein LOC101208604 [Cucumis sativus] >KGN56852.1 hypothetical ...	[more]
XP_008438516.1	9.6e-93	93.10	PREDICTED: uncharacterized protein LOC103483588 [Cucumis melo]	[more]
KAA0049248.1	2.0e-90	92.93	uncharacterized protein E6C27_scaffold171G004880 [Cucumis melo var. makuwa] >TYK...	[more]
XP_038903123.1	1.6e-79	85.22	uncharacterized protein LOC120089795 [Benincasa hispida]	[more]
XP_022975067.1	2.0e-61	73.13	uncharacterized protein LOC111474038 [Cucurbita maxima]	[more]

BLAST of CsaV3_3G012050 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_3G012050 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L896	3.2e-102	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G135000 PE=4 SV=1	[more]
A0A1S3AW79	4.7e-93	93.10	uncharacterized protein LOC103483588 OS=Cucumis melo OX=3656 GN=LOC103483588 PE=...	[more]
A0A5D3D117	9.7e-91	92.93	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1IC02	9.5e-62	73.13	uncharacterized protein LOC111474038 OS=Cucurbita maxima OX=3661 GN=LOC111474038...	[more]
A0A6J1IAE8	1.4e-60	73.47	uncharacterized protein LOC111473184 OS=Cucurbita maxima OX=3661 GN=LOC111473184...	[more]

BLAST of CsaV3_3G012050 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G14380.1	9.8e-19	36.41	unknown protein; Has 22 Blast hits to 22 proteins in 8 species: Archae - 0; Bact...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008480	Protein of unknown function DUF761, plant	PFAM	PF05553	DUF761	coord: 167..199 e-value: 3.6E-11 score: 42.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 118..144
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 123..144
None	No IPR available	PANTHER	PTHR33098:SF3	COTTON FIBER PROTEIN	coord: 1..200
None	No IPR available	PANTHER	PTHR33098	COTTON FIBER (DUF761)	coord: 1..200

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G012050.1	CsaV3_3G012050.1	mRNA