CsaV3_3G010880 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G010880
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Chromatin assembly factor 1 subunit A
Location	chr3: 8622738 .. 8626436 (-)
RNA-Seq Expression	CsaV3_3G010880
Synteny	CsaV3_3G010880

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTGGTGACAGTCACAGAATTTACAAAAATTGGATCACTTTTAAAAACCAAATCAACAGAACCGAATTTCACTGAATTCGAAAAATATGGTTCGGTTCGACTTAAAGGAATTACGAACCAAATCGTTTCTAATTCAGGGTAAAAAACGAGCAAAATCAGATTTAAAACCGGTGAATCAAACAATTTTTAACTAAAAAATACATATTGACAAAAAAAAAACCTAAATAATACATATTGAGAAAGCCAAAATCGAAAACCAAAAACCAAATTCCATATAGCAGTGGAGTCTGAATCAGTTTGAACCGAAAATCGGTTCAGTTGCATTTAAAAATTTGAACTTTTTCGTTTGGTTTGACCATCGACCGAACCGAACCGTGCTCAACTCGTTGTGGTGTGGCAGCCAACCCTACTCCTGTTTCTTCTCTTTTTCATATCAACCGTTCCCATCTTATTCCTCTCTCTACTCTCACTCCCCAAGCTGCCATTTGCAAAATGCTTCCATCTCGAGCTCTATAATCAACCCTTTGTTTTTTTTGTTCTTCAATTCGTAATTTTGAAATCCCTGTTTTTGTTGAATTTATTTGTTCAAATCGTTCTGATTTTGAAGCCCAGAAGCTTGTACGACACCAATGGCGTTTGCGTCTGGTTCCGTGATCCGCAATGCAACCAATCTCTCTAATAACCTTCTTCGTTCCTTCTCCACTTCCATCAAAACCGCTCAACATAACAATCACCTGCAGACCCAAGAATACTTGGAGGCGAACAGCTTTATTGGTAGCTGGCAGGCCCCGAAAAACCCCAAGGAAGCGCAGGCCAGACTTGCTCGGCTCCGAAGGGAGTATGCCAAGCAGGTGAAACAGGTACGTAAGAATTACATCCAGGAGGTTGAACTCTTGAGGCTCGAAAGGGAGCAGAAGGACGAAGCCAAGAAAGAAGCGCTTAGGGTTGCCAATGAGGAACGCAAGAAGCTTAAAGCTGAAGCTGCTAAAGTCCGAGCTGAAGAGCGTAAGGTTGCTGATGAAGAGTTCCGACTGACTTTGGTAAGTCATTTCCCCATCTTCTTTAACATTTACGTCGTGAGATATTATTGCTTGAAGTTTTAATTGGTAAGAATTTGGTTGGAAATGCATCCATTACTTCGAATCTATATGAATTCTGAGAGAAGTCTGTTAATTTTTCTTTTAATGATTGGAAGGAGGGAATTTTTTTGTCTCTGGTTCAATTCCTTGCTTGAATTGGTATATTTATGGTTATATGTTTTGCTGCTCTCTTGTTCTTGTCTTAACTTCGCTAAATGTAAATGGGTGCTTTTGGTTTTCTTCGTCTCATCTCTGCTTACATACTCAACGCTTCTCTTAGTCCGACTTTGCCATTTTGGTAATTCAATAGTGGGAACTTTTAATTTGATATGCTCATTGAATGATTATGTGGTGCTTTTGAACTAAATTTGAGTCCCCAAGGGTCACAACGATGTTGAAGAGTTGCCAGAAGGTCGAGGTTCTGCTAACGAACTCTCCTATTATGTCGAGAATTTAAACATTTGAAGTCAGGATAATACTCGTACGTGAAGTGAATGCTTTCATGCCAATTGCCTATTATTATCAATCATGTGTGTTAACTGTTCATCATATGGGGAAAATCTGGAGCAAAACTTTAGTTGTGATGTTCTATATCTGAGGTCCCCAATCTTCCTTTTTCAAAAGCTTGTCAGCCGAATTTTATTCAATAGGTGCCATGGTTTTGGGAGTTCCTTGATCATTTCCTGTTCTGGACCAAAGTTTGAGCTGTTATGTTCTATAGTGAAATGTTGAAATTACAAAATTATATGAAAAGGAAGAAAATTCCCATTCAGATAAAACACAGAAAGTTTCTCTAATTGTTTGGATTGGAGTCCACGTTATAGTCGCTGAAAAGGAGGACAGGGTTGTCAAGAAGGCTTCTGTTTTCTTCTTGTTTTTGAAACTGTCATTTCTTCTTCTCTTGAAAATGATTCTGGCGGTTGACACACGTCTTATGCAAACCAGTAATTTAGAATCTGAGATTAGGAGCTTGAGATTTGAAACTTCATGTAGCTTGATGGGATTTCTTAGGAATAGAACAAATGAAAGTCAGATCTAGGTAGACTTTATTAGCTTCAAAAGAATGTTCTAGTCATTGTTTGTTTTCCTTAAGCTGGACTTTTCCAACATAATAAATTGTTTCCACTTCTTGAGAAGAGTTTGAAATTTAAGCTTTTGGGACAAACTAAACTTTGACCAATGTTCTACGGAAAACATTCATCCACTAAGGCTTCAGGAGTGTGACAAAATCTAGTGATCAATTGACAAGATTATCAATTTTGTAAGGTCTCGGTCACCCAAGTAAAATTTCCCATCTTATGGGAATTCATGGAAGGGACCATTGGGCAAACAAGTTTCAGAGTGGCCAAGTTCTTCATTCATTTTATTGAATATTTTCCTGTGCTTGGGCAATTCCTCTAATCCCTGAGGATTAATTGTAAGGCCCCCTTATTGCCCTTGATTTTAGTGGGTGCTAAATGGGGAAGTGGCCTCTCTTGAAGAGACTTTTCACTCTTCTCAATATTGAGAGTTCAATTGTACAATTATTTCGGATTGATATATTAAGAGAATATCGATATTAAAGGATATTTCTACAAGTCAAAAAACTTAGAAAAATTGTTTAAATTAATATATGAGTTATTTTTACTCTATTAAACTAAGTTATGGATATTGTTACTAGTATTTCTATTCATATTGAATTAGATAGACGTCAATTTTTTATGTTTTGCAATCATTTGCAAAACAGATAAAAAGATATCCATAGATGAATGTCAATGTCGAACTTTTTTATTCATGGATGTATCGACTGATATTTTGACAATATCAACGGATATTTTCGTCCTTGCTAAGAAGGATTTCAACCATGTTCTAGTTTTCTCATCTTTTCTTGCAATTCACTCAATAATCTAACGTGGCTCAATTGATGTGATTATATAGGTGAAAGAAAGAGCTGAGAAGTTGGAGCATTGGAGAATGATGGAAAAGAAGAGGGAAGAAAAAAAGAAAGAAAAGAAGGAGCTACTAAGACGGCAGAGTTCCATGTGGGTTGATGAAAATAAATTGGAAGAGAAGCTATTAGAAGCCATTGTTAATACCATCACTCTCTGAGCTTTCTTACTTTCCAGTGATAATTGCCCAACTTTCTCTTACGTTTCTTTGTTGGAAGCAATTTTTAGTTACTGGATTCTAGCTGAGAAGTTTCTGCATAATCCAAGTTTTTGACTCTTGCGATGAAGCACTCGACATCTTGTACACCCTTTTGTTACTGTTATTATTATCGTTTGGGGGGAAATCAGTTTCTACTCTTTGATGTTGTTTCTGTTATTATTATCATTAGGGGGGAAAGTCAGTTTCTTCTACACTTTGATGTTGTAGCATTTAAAACTTCAAACTAATAATTCTATAATTCTATCAATTTAGAGCATGTTATCTTCATTACAAAGTTATAGAATTTTAATTCTCTTCTTGTCTAATGGGAGATTGTTTTGTAACTATGGCTTGAGATTCTTCCTCCTCCTTAATTTAAGAAAGACAGTGAACCAGCCAAAAGCAATCAAAAGCAAGCGTAAGATTCAAATCCTTTCTTGTACTAAAAAGGATAATTTATGGCTATATTTACTTGATTTCTTCTTAACCCAAG

mRNA sequence

ATGGCGTTTGCGTCTGGTTCCGTGATCCGCAATGCAACCAATCTCTCTAATAACCTTCTTCGTTCCTTCTCCACTTCCATCAAAACCGCTCAACATAACAATCACCTGCAGACCCAAGAATACTTGGAGGCGAACAGCTTTATTGGTAGCTGGCAGGCCCCGAAAAACCCCAAGGAAGCGCAGGCCAGACTTGCTCGGCTCCGAAGGGAGTATGCCAAGCAGGTGAAACAGGTACGTAAGAATTACATCCAGGAGGTTGAACTCTTGAGGCTCGAAAGGGAGCAGAAGGACGAAGCCAAGAAAGAAGCGCTTAGGGTTGCCAATGAGGAACGCAAGAAGCTTAAAGCTGAAGCTGCTAAAGTCCGAGCTGAAGAGCGTAAGGTTGCTGATGAAGAGTTCCGACTGACTTTGGTAAGTCATTTCCCCATCTTCTTTAACATTTACGTCGTGAGATATTATTGCTTGAAGTTTTAA

Coding sequence (CDS)

ATGGCGTTTGCGTCTGGTTCCGTGATCCGCAATGCAACCAATCTCTCTAATAACCTTCTTCGTTCCTTCTCCACTTCCATCAAAACCGCTCAACATAACAATCACCTGCAGACCCAAGAATACTTGGAGGCGAACAGCTTTATTGGTAGCTGGCAGGCCCCGAAAAACCCCAAGGAAGCGCAGGCCAGACTTGCTCGGCTCCGAAGGGAGTATGCCAAGCAGGTGAAACAGGTACGTAAGAATTACATCCAGGAGGTTGAACTCTTGAGGCTCGAAAGGGAGCAGAAGGACGAAGCCAAGAAAGAAGCGCTTAGGGTTGCCAATGAGGAACGCAAGAAGCTTAAAGCTGAAGCTGCTAAAGTCCGAGCTGAAGAGCGTAAGGTTGCTGATGAAGAGTTCCGACTGACTTTGGTAAGTCATTTCCCCATCTTCTTTAACATTTACGTCGTGAGATATTATTGCTTGAAGTTTTAA

Protein sequence

MAFASGSVIRNATNLSNNLLRSFSTSIKTAQHNNHLQTQEYLEANSFIGSWQAPKNPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEREQKDEAKKEALRVANEERKKLKAEAAKVRAEERKVADEEFRLTLVSHFPIFFNIYVVRYYCLKF*

Homology

[Close]

BLAST of CsaV3_3G010880 vs. NCBI nr
Match: KAE8650295.1 (hypothetical protein Csa_010436 [Cucumis sativus])

HSP 1 Score: 286.6 bits (732), Expect = 1.3e-73
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0


Query: 1   MAFASGSVIRNATNLSNNLLRSFSTSIKTAQHNNHLQTQEYLEANSFIGSWQAPKNPKEA 60
           MAFASGSVIRNATNLSNNLLRSFSTSIKTAQHNNHLQTQEYLEANSFIGSWQAPKNPKEA
Sbjct: 1   MAFASGSVIRNATNLSNNLLRSFSTSIKTAQHNNHLQTQEYLEANSFIGSWQAPKNPKEA 60

Query: 61  QARLARLRREYAKQVKQVRKNYIQEVELLRLEREQKDEAKKEALRVANEERKKLKAEAAK 120
           QARLARLRREYAKQVKQVRKNYIQEVELLRLEREQKDEAKKEALRVANEERKKLKAEAAK
Sbjct: 61  QARLARLRREYAKQVKQVRKNYIQEVELLRLEREQKDEAKKEALRVANEERKKLKAEAAK 120

Query: 121 VRAEERKVADEEFRLTLVSHFPIFFNIYVVRYYCLKF 158
           VRAEERKVADEEFRLTLVSHFPIFFNIYVVRYYCLKF
Sbjct: 121 VRAEERKVADEEFRLTLVSHFPIFFNIYVVRYYCLKF 157

[Close]

BLAST of CsaV3_3G010880 vs. NCBI nr
Match: XP_004133989.1 (chromatin assembly factor 1 subunit A [Cucumis sativus])

HSP 1 Score: 246.5 bits (628), Expect = 1.5e-61
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0


Query: 1   MAFASGSVIRNATNLSNNLLRSFSTSIKTAQHNNHLQTQEYLEANSFIGSWQAPKNPKEA 60
           MAFASGSVIRNATNLSNNLLRSFSTSIKTAQHNNHLQTQEYLEANSFIGSWQAPKNPKEA
Sbjct: 1   MAFASGSVIRNATNLSNNLLRSFSTSIKTAQHNNHLQTQEYLEANSFIGSWQAPKNPKEA 60

Query: 61  QARLARLRREYAKQVKQVRKNYIQEVELLRLEREQKDEAKKEALRVANEERKKLKAEAAK 120
           QARLARLRREYAKQVKQVRKNYIQEVELLRLEREQKDEAKKEALRVANEERKKLKAEAAK
Sbjct: 61  QARLARLRREYAKQVKQVRKNYIQEVELLRLEREQKDEAKKEALRVANEERKKLKAEAAK 120

Query: 121 VRAEERKVADEEFRLTLV 139
           VRAEERKVADEEFRLTLV
Sbjct: 121 VRAEERKVADEEFRLTLV 138

[Close]

BLAST of CsaV3_3G010880 vs. NCBI nr
Match: XP_008438350.1 (PREDICTED: LOW QUALITY PROTEIN: chromatin assembly factor 1 subunit A [Cucumis melo])

HSP 1 Score: 232.6 bits (592), Expect = 2.3e-57
Identity = 129/138 (93.48%), Postives = 136/138 (98.55%), Query Frame = 0


Query: 1   MAFASGSVIRNATNLSNNLLRSFSTSIKTAQHNNHLQTQEYLEANSFIGSWQAPKNPKEA 60
           MAFASGSVIRNATNLSNNLLRSFSTSIK+A +NNHLQT EYLEANSFIGSWQAPK+PKEA
Sbjct: 1   MAFASGSVIRNATNLSNNLLRSFSTSIKSAHNNNHLQTHEYLEANSFIGSWQAPKDPKEA 60

Query: 61  QARLARLRREYAKQVKQVRKNYIQEVELLRLEREQKDEAKKEALRVANEERKKLKAEAAK 120
           QARLARLRREYAKQVKQVRKNYIQEVELLRLE+EQKDEAK+EALRVANEERKKLKAEAAK
Sbjct: 61  QARLARLRREYAKQVKQVRKNYIQEVELLRLEKEQKDEAKREALRVANEERKKLKAEAAK 120

Query: 121 VRAEERKVADEEFRLTLV 139
           VRAEERK+ADEEFRLTL+
Sbjct: 121 VRAEERKIADEEFRLTLM 138

[Close]

BLAST of CsaV3_3G010880 vs. NCBI nr
Match: KAA0049145.1 (chromatin assembly factor 1 subunit A [Cucumis melo var. makuwa])

HSP 1 Score: 232.6 bits (592), Expect = 2.3e-57
Identity = 129/137 (94.16%), Postives = 135/137 (98.54%), Query Frame = 0


Query: 1   MAFASGSVIRNATNLSNNLLRSFSTSIKTAQHNNHLQTQEYLEANSFIGSWQAPKNPKEA 60
           MAFASGSVIRNATNLSNNLLRSFSTSIK+A +NNHLQT EYLEANSFIGSWQAPK+PKEA
Sbjct: 1   MAFASGSVIRNATNLSNNLLRSFSTSIKSAHNNNHLQTHEYLEANSFIGSWQAPKDPKEA 60

Query: 61  QARLARLRREYAKQVKQVRKNYIQEVELLRLEREQKDEAKKEALRVANEERKKLKAEAAK 120
           QARLARLRREYAKQVKQVRKNYIQEVELLRLE+EQKDEAK+EALRVANEERKKLKAEAAK
Sbjct: 61  QARLARLRREYAKQVKQVRKNYIQEVELLRLEKEQKDEAKREALRVANEERKKLKAEAAK 120

Query: 121 VRAEERKVADEEFRLTL 138
           VRAEERK+ADEEFRLTL
Sbjct: 121 VRAEERKIADEEFRLTL 137

[Close]

BLAST of CsaV3_3G010880 vs. NCBI nr
Match: TYK17416.1 (chromatin assembly factor 1 subunit A [Cucumis melo var. makuwa])

HSP 1 Score: 232.6 bits (592), Expect = 2.3e-57
Identity = 129/138 (93.48%), Postives = 136/138 (98.55%), Query Frame = 0


Query: 1   MAFASGSVIRNATNLSNNLLRSFSTSIKTAQHNNHLQTQEYLEANSFIGSWQAPKNPKEA 60
           MAFASGSVIRNATNLSNNLLRSFSTSIK+A +NNHLQT EYLEANSFIGSWQAPK+PKEA
Sbjct: 1   MAFASGSVIRNATNLSNNLLRSFSTSIKSAHNNNHLQTHEYLEANSFIGSWQAPKDPKEA 60

Query: 61  QARLARLRREYAKQVKQVRKNYIQEVELLRLEREQKDEAKKEALRVANEERKKLKAEAAK 120
           QARLARLRREYAKQVKQVRKNYIQEVELLRLE+EQKDEAK+EALRVANEERKKLKAEAAK
Sbjct: 61  QARLARLRREYAKQVKQVRKNYIQEVELLRLEKEQKDEAKREALRVANEERKKLKAEAAK 120

Query: 121 VRAEERKVADEEFRLTLV 139
           VRAEERK+ADEEFRLTL+
Sbjct: 121 VRAEERKIADEEFRLTLM 138

[Close]

BLAST of CsaV3_3G010880 vs. ExPASy TrEMBL
Match: A0A0A0L7X4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G130330 PE=4 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 7.4e-62
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0


Query: 1   MAFASGSVIRNATNLSNNLLRSFSTSIKTAQHNNHLQTQEYLEANSFIGSWQAPKNPKEA 60
           MAFASGSVIRNATNLSNNLLRSFSTSIKTAQHNNHLQTQEYLEANSFIGSWQAPKNPKEA
Sbjct: 1   MAFASGSVIRNATNLSNNLLRSFSTSIKTAQHNNHLQTQEYLEANSFIGSWQAPKNPKEA 60

Query: 61  QARLARLRREYAKQVKQVRKNYIQEVELLRLEREQKDEAKKEALRVANEERKKLKAEAAK 120
           QARLARLRREYAKQVKQVRKNYIQEVELLRLEREQKDEAKKEALRVANEERKKLKAEAAK
Sbjct: 61  QARLARLRREYAKQVKQVRKNYIQEVELLRLEREQKDEAKKEALRVANEERKKLKAEAAK 120

Query: 121 VRAEERKVADEEFRLTLV 139
           VRAEERKVADEEFRLTLV
Sbjct: 121 VRAEERKVADEEFRLTLV 138

[Close]

BLAST of CsaV3_3G010880 vs. ExPASy TrEMBL
Match: A0A5D3D385 (Chromatin assembly factor 1 subunit A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G002780 PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 1.1e-57
Identity = 129/138 (93.48%), Postives = 136/138 (98.55%), Query Frame = 0


Query: 1   MAFASGSVIRNATNLSNNLLRSFSTSIKTAQHNNHLQTQEYLEANSFIGSWQAPKNPKEA 60
           MAFASGSVIRNATNLSNNLLRSFSTSIK+A +NNHLQT EYLEANSFIGSWQAPK+PKEA
Sbjct: 1   MAFASGSVIRNATNLSNNLLRSFSTSIKSAHNNNHLQTHEYLEANSFIGSWQAPKDPKEA 60

Query: 61  QARLARLRREYAKQVKQVRKNYIQEVELLRLEREQKDEAKKEALRVANEERKKLKAEAAK 120
           QARLARLRREYAKQVKQVRKNYIQEVELLRLE+EQKDEAK+EALRVANEERKKLKAEAAK
Sbjct: 61  QARLARLRREYAKQVKQVRKNYIQEVELLRLEKEQKDEAKREALRVANEERKKLKAEAAK 120

Query: 121 VRAEERKVADEEFRLTLV 139
           VRAEERK+ADEEFRLTL+
Sbjct: 121 VRAEERKIADEEFRLTLM 138

[Close]

BLAST of CsaV3_3G010880 vs. ExPASy TrEMBL
Match: A0A5A7U662 (Chromatin assembly factor 1 subunit A OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G003780 PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 1.1e-57
Identity = 129/137 (94.16%), Postives = 135/137 (98.54%), Query Frame = 0


Query: 1   MAFASGSVIRNATNLSNNLLRSFSTSIKTAQHNNHLQTQEYLEANSFIGSWQAPKNPKEA 60
           MAFASGSVIRNATNLSNNLLRSFSTSIK+A +NNHLQT EYLEANSFIGSWQAPK+PKEA
Sbjct: 1   MAFASGSVIRNATNLSNNLLRSFSTSIKSAHNNNHLQTHEYLEANSFIGSWQAPKDPKEA 60

Query: 61  QARLARLRREYAKQVKQVRKNYIQEVELLRLEREQKDEAKKEALRVANEERKKLKAEAAK 120
           QARLARLRREYAKQVKQVRKNYIQEVELLRLE+EQKDEAK+EALRVANEERKKLKAEAAK
Sbjct: 61  QARLARLRREYAKQVKQVRKNYIQEVELLRLEKEQKDEAKREALRVANEERKKLKAEAAK 120

Query: 121 VRAEERKVADEEFRLTL 138
           VRAEERK+ADEEFRLTL
Sbjct: 121 VRAEERKIADEEFRLTL 137

[Close]

BLAST of CsaV3_3G010880 vs. ExPASy TrEMBL
Match: A0A1S3AWS6 (LOW QUALITY PROTEIN: chromatin assembly factor 1 subunit A OS=Cucumis melo OX=3656 GN=LOC103483476 PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 1.1e-57
Identity = 129/138 (93.48%), Postives = 136/138 (98.55%), Query Frame = 0


Query: 1   MAFASGSVIRNATNLSNNLLRSFSTSIKTAQHNNHLQTQEYLEANSFIGSWQAPKNPKEA 60
           MAFASGSVIRNATNLSNNLLRSFSTSIK+A +NNHLQT EYLEANSFIGSWQAPK+PKEA
Sbjct: 1   MAFASGSVIRNATNLSNNLLRSFSTSIKSAHNNNHLQTHEYLEANSFIGSWQAPKDPKEA 60

Query: 61  QARLARLRREYAKQVKQVRKNYIQEVELLRLEREQKDEAKKEALRVANEERKKLKAEAAK 120
           QARLARLRREYAKQVKQVRKNYIQEVELLRLE+EQKDEAK+EALRVANEERKKLKAEAAK
Sbjct: 61  QARLARLRREYAKQVKQVRKNYIQEVELLRLEKEQKDEAKREALRVANEERKKLKAEAAK 120

Query: 121 VRAEERKVADEEFRLTLV 139
           VRAEERK+ADEEFRLTL+
Sbjct: 121 VRAEERKIADEEFRLTLM 138

[Close]

BLAST of CsaV3_3G010880 vs. ExPASy TrEMBL
Match: A0A6J1IZ92 (uncharacterized protein LOC111479798 OS=Cucurbita maxima OX=3661 GN=LOC111479798 PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 2.5e-49
Identity = 113/138 (81.88%), Postives = 127/138 (92.03%), Query Frame = 0


Query: 1   MAFASGSVIRNATNLSNNLLRSFSTSIKTAQHNNHLQTQEYLEANSFIGSWQAPKNPKEA 60
           MA  S S IR+ATNLSNNLLRSFSTSIK+A HNNH QT +YLEA++F+GSW+APK+PKEA
Sbjct: 1   MALTSRSAIRSATNLSNNLLRSFSTSIKSAHHNNHQQTHKYLEASAFVGSWEAPKDPKEA 60

Query: 61  QARLARLRREYAKQVKQVRKNYIQEVELLRLEREQKDEAKKEALRVANEERKKLKAEAAK 120
           QA+LA LRR+YAKQVKQVRKNYIQEVELLRLE++ KDEAK+EALRVANEERKKLKAEAAK
Sbjct: 61  QAKLALLRRDYAKQVKQVRKNYIQEVELLRLEKQSKDEAKREALRVANEERKKLKAEAAK 120

Query: 121 VRAEERKVADEEFRLTLV 139
            RAEERKVADEEFR TL+
Sbjct: 121 ARAEERKVADEEFRRTLM 138

[Close]

BLAST of CsaV3_3G010880 vs. TAIR 10
Match: AT5G49210.1 (unknown protein; Has 3675 Blast hits to 2315 proteins in 312 species: Archae - 2; Bacteria - 342; Metazoa - 1190; Fungi - 281; Plants - 114; Viruses - 4; Other Eukaryotes - 1742 (source: NCBI BLink). )

HSP 1 Score: 125.2 bits (313), Expect = 4.8e-29
Identity = 70/119 (58.82%), Postives = 92/119 (77.31%), Query Frame = 0


Query: 20  LRSFSTSIKTAQHNNHLQTQEYLEANSFIGSWQAPKNPKEAQARLARLRREYAKQVKQVR 79
           LRSFS       H  H +T  +LE   +IGSW+AP +PK+A+ +LA+LRR+YAK+V+  R
Sbjct: 24  LRSFSAD--ATHHRFHQETHNFLEPEYYIGSWEAPSDPKDAERKLAQLRRDYAKKVRVYR 83

Query: 80  KNYIQEVELLRLEREQKDEAKKEALRVANEERKKLKAEAAKVRAEERKVADEEFRLTLV 139
           K YI E+E+LR+E+++KDEA+  A R ANEER+ LKAEAAKVRAEERK+ADEEFR TL+
Sbjct: 84  KEYIHEIEMLRVEKQRKDEARLLAERAANEERRLLKAEAAKVRAEERKIADEEFRQTLI 140

[Close]

BLAST of CsaV3_3G010880 vs. TAIR 10
Match: AT5G49210.2 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 125.2 bits (313), Expect = 4.8e-29
Identity = 70/119 (58.82%), Postives = 92/119 (77.31%), Query Frame = 0


Query: 20  LRSFSTSIKTAQHNNHLQTQEYLEANSFIGSWQAPKNPKEAQARLARLRREYAKQVKQVR 79
           LRSFS       H  H +T  +LE   +IGSW+AP +PK+A+ +LA+LRR+YAK+V+  R
Sbjct: 24  LRSFSAD--ATHHRFHQETHNFLEPEYYIGSWEAPSDPKDAERKLAQLRRDYAKKVRVYR 83

Query: 80  KNYIQEVELLRLEREQKDEAKKEALRVANEERKKLKAEAAKVRAEERKVADEEFRLTLV 139
           K YI E+E+LR+E+++KDEA+  A R ANEER+ LKAEAAKVRAEERK+ADEEFR TL+
Sbjct: 84  KEYIHEIEMLRVEKQRKDEARLLAERAANEERRLLKAEAAKVRAEERKIADEEFRQTLI 140

The following BLAST results are available for this feature:

BLAST of CsaV3_3G010880 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8650295.1	1.3e-73	100.00	hypothetical protein Csa_010436 [Cucumis sativus]	[more]
XP_004133989.1	1.5e-61	100.00	chromatin assembly factor 1 subunit A [Cucumis sativus]	[more]
XP_008438350.1	2.3e-57	93.48	PREDICTED: LOW QUALITY PROTEIN: chromatin assembly factor 1 subunit A [Cucumis m...	[more]
KAA0049145.1	2.3e-57	94.16	chromatin assembly factor 1 subunit A [Cucumis melo var. makuwa]	[more]
TYK17416.1	2.3e-57	93.48	chromatin assembly factor 1 subunit A [Cucumis melo var. makuwa]	[more]

BLAST of CsaV3_3G010880 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_3G010880 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L7X4	7.4e-62	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G130330 PE=4 SV=1	[more]
A0A5D3D385	1.1e-57	93.48	Chromatin assembly factor 1 subunit A OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A5A7U662	1.1e-57	94.16	Chromatin assembly factor 1 subunit A OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3AWS6	1.1e-57	93.48	LOW QUALITY PROTEIN: chromatin assembly factor 1 subunit A OS=Cucumis melo OX=36...	[more]
A0A6J1IZ92	2.5e-49	81.88	uncharacterized protein LOC111479798 OS=Cucurbita maxima OX=3661 GN=LOC111479798...	[more]

BLAST of CsaV3_3G010880 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G49210.1	4.8e-29	58.82	unknown protein; Has 3675 Blast hits to 2315 proteins in 312 species: Archae - 2...	[more]
AT5G49210.2	4.8e-29	58.82	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 72..131
None	No IPR available	PANTHER	PTHR36402	EXPRESSED PROTEIN	coord: 12..138

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G010880.1	CsaV3_3G010880.1	mRNA