CsaV3_3G010460 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G010460
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr3: 8395365 .. 8395556 (+)
RNA-Seq ExpressionCsaV3_3G010460
SyntenyCsaV3_3G010460
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGGGTGAGAAGAGTAAATGCAGCCGTGGCAGTGGGTGTGCCTCCACAATATCGTATGGGCCCCACTCACCACCTTCGACTTCGGTCCGATCAATCATCAAACGCACTTCTTCGTTCGCCACGTCGACGGTTGCAACCTCGTACCATACAAATGCCCGCACCCAATAGTGTCCTAATTCTTTTATTTTAG

mRNA sequence

ATGTGGGTGAGAAGAGTAAATGCAGCCGTGGCAGTGGGTGTGCCTCCACAATATCGTATGGGCCCCACTCACCACCTTCGACTTCGGTCCGATCAATCATCAAACGCACTTCTTCGTTCGCCACGTCGACGGTTGCAACCTCGTACCATACAAATGCCCGCACCCAATAGTGTCCTAATTCTTTTATTTTAG

Coding sequence (CDS)

ATGTGGGTGAGAAGAGTAAATGCAGCCGTGGCAGTGGGTGTGCCTCCACAATATCGTATGGGCCCCACTCACCACCTTCGACTTCGGTCCGATCAATCATCAAACGCACTTCTTCGTTCGCCACGTCGACGGTTGCAACCTCGTACCATACAAATGCCCGCACCCAATAGTGTCCTAATTCTTTTATTTTAG

Protein sequence

MWVRRVNAAVAVGVPPQYRMGPTHHLRLRSDQSSNALLRSPRRRLQPRTIQMPAPNSVLILLF*
Homology
[Close]
BLAST of CsaV3_3G010460 vs. NCBI nr
Match: KGN56681.1 (hypothetical protein Csa_010196 [Cucumis sativus])

HSP 1 Score: 128.6 bits (322), Expect = 1.9e-26
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0 

Query: 1  MWVRRVNAAVAVGVPPQYRMGPTHHLRLRSDQSSNALLRSPRRRLQPRTIQMPAPNSVLI 60
          MWVRRVNAAVAVGVPPQYRMGPTHHLRLRSDQSSNALLRSPRRRLQPRTIQMPAPNSVLI
Sbjct: 1  MWVRRVNAAVAVGVPPQYRMGPTHHLRLRSDQSSNALLRSPRRRLQPRTIQMPAPNSVLI 60

Query: 61 LLF 64
          LLF
Sbjct: 61 LLF 63

[Close]
BLAST of CsaV3_3G010460 vs. ExPASy TrEMBL
Match: A0A0A0L990 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G128905 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 9.1e-27
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0 

Query: 1  MWVRRVNAAVAVGVPPQYRMGPTHHLRLRSDQSSNALLRSPRRRLQPRTIQMPAPNSVLI 60
          MWVRRVNAAVAVGVPPQYRMGPTHHLRLRSDQSSNALLRSPRRRLQPRTIQMPAPNSVLI
Sbjct: 1  MWVRRVNAAVAVGVPPQYRMGPTHHLRLRSDQSSNALLRSPRRRLQPRTIQMPAPNSVLI 60

Query: 61 LLF 64
          LLF
Sbjct: 61 LLF 63

The following BLAST results are available for this feature:
BLAST of CsaV3_3G010460 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN56681.11.9e-26100.00hypothetical protein Csa_010196 [Cucumis sativus][more]
BLAST of CsaV3_3G010460 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_3G010460 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L9909.1e-27100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G128905 PE=4 SV=1[more]
BLAST of CsaV3_3G010460 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G010460.1CsaV3_3G010460.1mRNA