CsaV3_3G010280 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G010280
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	sister chromatid cohesion protein DCC1
Location	chr3: 8281996 .. 8284781 (-)
RNA-Seq Expression	CsaV3_3G010280
Synteny	CsaV3_3G010280

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTGATTTAGCGCGAATGGACTCTTCGCTATTGTTCTTCTCGGCAAATCGTCGGCCGTCTTTGTATCAGTTTCTCAAGGATTTCTTTAACTCCCTCCGGTTCCTAAATCTCGGCACTTACCGTTTCACTATCCAATTTGAACATTTCTTTGTGTAATGTTAGGTTTTTCTTTGATTCTGTAATTGTTCCGCTAATCTCTTCGATGTGTCCCGAAAACGATGAATGAGACGATAGCGGCAGCGCATTGGAAACTCTGATTTCAAGGATTTCGGAGGTAAAAGTTTTGATGATCAGATTCGTTGTGTTGCTTCTGGTAGGAATAATTTGATAGACTTGTGTTACAAACTTGTTATAGGGTTTCGTTTTATATTTGCTGACATTTTGCTATGAATTATTATTTTTTACAATTACCTTATTCCAAATGATGCAATGATAGAGAAACCCCGAAAACCCTCTCTCTCGGTCACTCTGCTATCCTCTTGCTAACTTGCTATTCATTTGAACCCTATTTCCTCCATCCAGATCTCAGAAGTAGTCGCTTCATAATTTTTTAAGCAGAAATGTTGCTGACGGTTATATGATTATGGAGCTGTAATTTTTTATAGTTGTAGACTCAATAGGTTTTGAGCTGTAATTTTTTATAATTGGAGACTGAGAATTATGATCTGCATCTTTAATTATATTGCCAAATCTTGTAGGAGTGTTCTCATGAGTGTAGTTAGAGATCAAATCTTTCTGAATATGTTGTGTCTAGTTTATAGTGTAGCTTTTGGGATTAATCCCAGTTCAACAGTATCTTGAAAAGTGGTTAGATACTTAAATGTAGCCAACTTGATGTGTTTTGGTTCCATTTTGGAAGATGGAGCAGAAGAATCCACATGGAAAAGGTGCGGATGCAGTTTTAAATCTTCAGCCAAACTCCTCGATCTCTATTGCATATCACTCACTCTTTGGTCCACATGATGATTTGGTACTTCTGGAGGTCGATGAAAAGCTTCTGGAAGAAGTCCTGCACCAACGGTAAATAAAGGAAACCATATGTTAATTTGTTAGAATTCTTTTGAATTGGTCTAACTTTGAGGATATCTCTTCTCAGAGTAAGCATCAGAGGACAGCCAGAAGAAGATGCAGTCTTTTGCACAAAGTCGAAAACTTATGGAATCAAATACGTGGGAACTTCCAATTCTGTACTTCTTATACCGCCATCCGGTCGATCAGAATACTATACTAATGAGCTAGACAGCCATCAGAAGGACAACAGTAAAGAAGTTGCCCCTGTGATTAAAGTTGCTCCAGGTATCATGGAACTTCATGAGATTGCTCCAAGGATTGATAAGCTTAAATTGCTTCTCTCAGAGGAACATTACAGCTTTGCCGATGAGTGGGAAAACGAAGCAGTGGACAAATATGAAAAGCGAATGTATAATTGGGATGATCTCATAAACAAGGTTCAGGCTAGTGACAATGAACTGAAAGCTGGATTACAAGCGCTTTCTGCAGTTGAGATTGATGGGTACTGGAGAATTGTGGATGAGAAATACATGGACTCCATGCTACAGATGCTTTTGCATAACAGGATTTTAAATGACTGGTCTCTAGATGCGCTTGATGAAGGTGTAATCATGAACGTGATGAAAATGGATGGTTTTCCTGAAAAACTTGTACAGCATTGTCTCCATGTTTATGGTGATAAATTGGATGAACATGAGGGGAAAAGTTGTTTATGGAGATTAAACGAGAAGCGGGTCTGTGTGCATTTTGCAAGAGAAGTCTTGAGGAAAGGAAAGATGAAGCTAGAGCATCTCATGGATGAATGGAGGCAGAAAATCCCACTAGGAATGTGTGCCAACTTTGACATGTTGGAAGGTGAAGTTTTGACTGAGAGGCTTGGTGTTGAGACATGGGTTCGTGGTTTCCGAGTTTGTCAATTGCCATCAAATCCTGCCGAGCGATTCACCATTTTGTTTAAAGAGCGACCAAAATGGGAGTGGAAAGATTTGCAGCCCTACATCAGGTTTGTTTGCTATACTGTCTTATTGATAATTTGTTCTTTGTACATGGAAACTTATAACTTCTATGTTTTAACTTTCAGGGATCTTACAGTTCCAGGCCTTTCATCAGAAGGTTTGCTTCTCAAATACACCCGAAGAACTCAACCGAACCCCGAAGCAGAAGCTGTGTTCAGTGCAAGATAGATTGATAATTCGTTGTACCATAATAACCAAACTTGCTCTGAATGACAGGTCTGTAAATTGCTCAACGTTCCACCTGGGTTAGACTTAATCATATTCATCCAGTTCTAGTGAAGAAATCCGGTTGATGGTGTGATGACGATGAGGTTGATCAAATAACCTTAACTTCTGAGTTCTTGGATGACTCCATTACTCTCAGAAAAGAGATCCAAGTATTCCACATTCTTGGAAGTTCGTATTTATCATGACTTTACTCGAACAAGTTCAGTTCTTTAGAACATACAACCGTGTCATTGAGTTGTAAGAAGTCCCTATTTCTTGGTTTCAGGTGGTGCAAGTTTTTTCATTACAATTCAGATGAACATAATAGAGGATTGAACGCCTAAAGTTTCGTCTTTATGCCATCAACTAGCTTTTGATTTCTATATTAGCCTGTAAATAGAGACATTGATTTCTTATGGTCTTTTGAGACAAAGGGAACTTTTTCTCCCCCAGCTAATCAACAAATTTCTATTGAGGATTTGTAAGTGTAGAATAAACTACTACACTGATGGTTTAAATTTAAACTGGAAAAATGTGTTTAATTGAAAGTTG

mRNA sequence

ATGGAGCAGAAGAATCCACATGGAAAAGGTGCGGATGCAGTTTTAAATCTTCAGCCAAACTCCTCGATCTCTATTGCATATCACTCACTCTTTGGTCCACATGATGATTTGGTACTTCTGGAGGTCGATGAAAAGCTTCTGGAAGAAGTCCTGCACCAACGAGTAAGCATCAGAGGACAGCCAGAAGAAGATGCAGTCTTTTGCACAAAGTCGAAAACTTATGGAATCAAATACGTGGGAACTTCCAATTCTGTACTTCTTATACCGCCATCCGGTCGATCAGAATACTATACTAATGAGCTAGACAGCCATCAGAAGGACAACAGTAAAGAAGTTGCCCCTGTGATTAAAGTTGCTCCAGGTATCATGGAACTTCATGAGATTGCTCCAAGGATTGATAAGCTTAAATTGCTTCTCTCAGAGGAACATTACAGCTTTGCCGATGAGTGGGAAAACGAAGCAGTGGACAAATATGAAAAGCGAATGTATAATTGGGATGATCTCATAAACAAGGTTCAGGCTAGTGACAATGAACTGAAAGCTGGATTACAAGCGCTTTCTGCAGTTGAGATTGATGGGTACTGGAGAATTGTGGATGAGAAATACATGGACTCCATGCTACAGATGCTTTTGCATAACAGGATTTTAAATGACTGGTCTCTAGATGCGCTTGATGAAGGTGTAATCATGAACGTGATGAAAATGGATGGTTTTCCTGAAAAACTTGTACAGCATTGTCTCCATGTTTATGGTGATAAATTGGATGAACATGAGGGGAAAAGTTGTTTATGGAGATTAAACGAGAAGCGGGTCTGTGTGCATTTTGCAAGAGAAGTCTTGAGGAAAGGAAAGATGAAGCTAGAGCATCTCATGGATGAATGGAGGCAGAAAATCCCACTAGGAATGTGTGCCAACTTTGACATGTTGGAAGGTGAAGTTTTGACTGAGAGGCTTGGTGTTGAGACATGGGTTCGTGGTTTCCGAGTTTGTCAATTGCCATCAAATCCTGCCGAGCGATTCACCATTTTGTTTAAAGAGCGACCAAAATGGGAGTGGAAAGATTTGCAGCCCTACATCAGGGATCTTACAGTTCCAGGCCTTTCATCAGAAGGTTTGCTTCTCAAATACACCCGAAGAACTCAACCGAACCCCGAAGCAGAAGCTGTGTTCAGTGCAAGATAG

Coding sequence (CDS)

ATGGAGCAGAAGAATCCACATGGAAAAGGTGCGGATGCAGTTTTAAATCTTCAGCCAAACTCCTCGATCTCTATTGCATATCACTCACTCTTTGGTCCACATGATGATTTGGTACTTCTGGAGGTCGATGAAAAGCTTCTGGAAGAAGTCCTGCACCAACGAGTAAGCATCAGAGGACAGCCAGAAGAAGATGCAGTCTTTTGCACAAAGTCGAAAACTTATGGAATCAAATACGTGGGAACTTCCAATTCTGTACTTCTTATACCGCCATCCGGTCGATCAGAATACTATACTAATGAGCTAGACAGCCATCAGAAGGACAACAGTAAAGAAGTTGCCCCTGTGATTAAAGTTGCTCCAGGTATCATGGAACTTCATGAGATTGCTCCAAGGATTGATAAGCTTAAATTGCTTCTCTCAGAGGAACATTACAGCTTTGCCGATGAGTGGGAAAACGAAGCAGTGGACAAATATGAAAAGCGAATGTATAATTGGGATGATCTCATAAACAAGGTTCAGGCTAGTGACAATGAACTGAAAGCTGGATTACAAGCGCTTTCTGCAGTTGAGATTGATGGGTACTGGAGAATTGTGGATGAGAAATACATGGACTCCATGCTACAGATGCTTTTGCATAACAGGATTTTAAATGACTGGTCTCTAGATGCGCTTGATGAAGGTGTAATCATGAACGTGATGAAAATGGATGGTTTTCCTGAAAAACTTGTACAGCATTGTCTCCATGTTTATGGTGATAAATTGGATGAACATGAGGGGAAAAGTTGTTTATGGAGATTAAACGAGAAGCGGGTCTGTGTGCATTTTGCAAGAGAAGTCTTGAGGAAAGGAAAGATGAAGCTAGAGCATCTCATGGATGAATGGAGGCAGAAAATCCCACTAGGAATGTGTGCCAACTTTGACATGTTGGAAGGTGAAGTTTTGACTGAGAGGCTTGGTGTTGAGACATGGGTTCGTGGTTTCCGAGTTTGTCAATTGCCATCAAATCCTGCCGAGCGATTCACCATTTTGTTTAAAGAGCGACCAAAATGGGAGTGGAAAGATTTGCAGCCCTACATCAGGGATCTTACAGTTCCAGGCCTTTCATCAGAAGGTTTGCTTCTCAAATACACCCGAAGAACTCAACCGAACCCCGAAGCAGAAGCTGTGTTCAGTGCAAGATAG

Protein sequence

MEQKNPHGKGADAVLNLQPNSSISIAYHSLFGPHDDLVLLEVDEKLLEEVLHQRVSIRGQPEEDAVFCTKSKTYGIKYVGTSNSVLLIPPSGRSEYYTNELDSHQKDNSKEVAPVIKVAPGIMELHEIAPRIDKLKLLLSEEHYSFADEWENEAVDKYEKRMYNWDDLINKVQASDNELKAGLQALSAVEIDGYWRIVDEKYMDSMLQMLLHNRILNDWSLDALDEGVIMNVMKMDGFPEKLVQHCLHVYGDKLDEHEGKSCLWRLNEKRVCVHFAREVLRKGKMKLEHLMDEWRQKIPLGMCANFDMLEGEVLTERLGVETWVRGFRVCQLPSNPAERFTILFKERPKWEWKDLQPYIRDLTVPGLSSEGLLLKYTRRTQPNPEAEAVFSAR*

Homology

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BLAST of CsaV3_3G010280 vs. NCBI nr
Match: XP_004133954.1 (sister chromatid cohesion protein DCC1 [Cucumis sativus] >KGN56663.1 hypothetical protein Csa_010867 [Cucumis sativus])

HSP 1 Score: 813.1 bits (2099), Expect = 1.0e-231
Identity = 393/393 (100.00%), Postives = 393/393 (100.00%), Query Frame = 0


Query: 1   MEQKNPHGKGADAVLNLQPNSSISIAYHSLFGPHDDLVLLEVDEKLLEEVLHQRVSIRGQ 60
           MEQKNPHGKGADAVLNLQPNSSISIAYHSLFGPHDDLVLLEVDEKLLEEVLHQRVSIRGQ
Sbjct: 1   MEQKNPHGKGADAVLNLQPNSSISIAYHSLFGPHDDLVLLEVDEKLLEEVLHQRVSIRGQ 60

Query: 61  PEEDAVFCTKSKTYGIKYVGTSNSVLLIPPSGRSEYYTNELDSHQKDNSKEVAPVIKVAP 120
           PEEDAVFCTKSKTYGIKYVGTSNSVLLIPPSGRSEYYTNELDSHQKDNSKEVAPVIKVAP
Sbjct: 61  PEEDAVFCTKSKTYGIKYVGTSNSVLLIPPSGRSEYYTNELDSHQKDNSKEVAPVIKVAP 120

Query: 121 GIMELHEIAPRIDKLKLLLSEEHYSFADEWENEAVDKYEKRMYNWDDLINKVQASDNELK 180
           GIMELHEIAPRIDKLKLLLSEEHYSFADEWENEAVDKYEKRMYNWDDLINKVQASDNELK
Sbjct: 121 GIMELHEIAPRIDKLKLLLSEEHYSFADEWENEAVDKYEKRMYNWDDLINKVQASDNELK 180

Query: 181 AGLQALSAVEIDGYWRIVDEKYMDSMLQMLLHNRILNDWSLDALDEGVIMNVMKMDGFPE 240
           AGLQALSAVEIDGYWRIVDEKYMDSMLQMLLHNRILNDWSLDALDEGVIMNVMKMDGFPE
Sbjct: 181 AGLQALSAVEIDGYWRIVDEKYMDSMLQMLLHNRILNDWSLDALDEGVIMNVMKMDGFPE 240

Query: 241 KLVQHCLHVYGDKLDEHEGKSCLWRLNEKRVCVHFAREVLRKGKMKLEHLMDEWRQKIPL 300
           KLVQHCLHVYGDKLDEHEGKSCLWRLNEKRVCVHFAREVLRKGKMKLEHLMDEWRQKIPL
Sbjct: 241 KLVQHCLHVYGDKLDEHEGKSCLWRLNEKRVCVHFAREVLRKGKMKLEHLMDEWRQKIPL 300

Query: 301 GMCANFDMLEGEVLTERLGVETWVRGFRVCQLPSNPAERFTILFKERPKWEWKDLQPYIR 360
           GMCANFDMLEGEVLTERLGVETWVRGFRVCQLPSNPAERFTILFKERPKWEWKDLQPYIR
Sbjct: 301 GMCANFDMLEGEVLTERLGVETWVRGFRVCQLPSNPAERFTILFKERPKWEWKDLQPYIR 360

Query: 361 DLTVPGLSSEGLLLKYTRRTQPNPEAEAVFSAR 394
           DLTVPGLSSEGLLLKYTRRTQPNPEAEAVFSAR
Sbjct: 361 DLTVPGLSSEGLLLKYTRRTQPNPEAEAVFSAR 393

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BLAST of CsaV3_3G010280 vs. NCBI nr
Match: XP_008438251.1 (PREDICTED: sister chromatid cohesion protein DCC1 [Cucumis melo] >KAA0049092.1 sister chromatid cohesion protein DCC1 [Cucumis melo var. makuwa] >TYK17471.1 sister chromatid cohesion protein DCC1 [Cucumis melo var. makuwa])

HSP 1 Score: 784.3 bits (2024), Expect = 5.1e-223
Identity = 380/393 (96.69%), Postives = 386/393 (98.22%), Query Frame = 0


Query: 1   MEQKNPHGKGADAVLNLQPNSSISIAYHSLFGPHDDLVLLEVDEKLLEEVLHQRVSIRGQ 60
           MEQ+NPHG+GADAVLNLQPNSSISIAYHSLFGPHDDLVLLEVDEKLLEEVLHQRVSIRGQ
Sbjct: 1   MEQQNPHGRGADAVLNLQPNSSISIAYHSLFGPHDDLVLLEVDEKLLEEVLHQRVSIRGQ 60

Query: 61  PEEDAVFCTKSKTYGIKYVGTSNSVLLIPPSGRSEYYTNELDSHQKDNSKEVAPVIKVAP 120
           PEEDAVFCTKSKTYGIKYVGTSNSVLLIPPSGRSEYY NELDSHQ DNSKEVAPVIKVAP
Sbjct: 61  PEEDAVFCTKSKTYGIKYVGTSNSVLLIPPSGRSEYYKNELDSHQTDNSKEVAPVIKVAP 120

Query: 121 GIMELHEIAPRIDKLKLLLSEEHYSFADEWENEAVDKYEKRMYNWDDLINKVQASDNELK 180
           GIMELHEIAPRIDKLKLLLSEE YSFADEWENEA DKYEKRMY+WDDLINKVQASD+ELK
Sbjct: 121 GIMELHEIAPRIDKLKLLLSEEPYSFADEWENEAADKYEKRMYSWDDLINKVQASDDELK 180

Query: 181 AGLQALSAVEIDGYWRIVDEKYMDSMLQMLLHNRILNDWSLDALDEGVIMNVMKMDGFPE 240
           AGLQALSAVEIDGYWRIVDEKYMDSMLQMLLHNRILNDWSLDALDE VIM VMKMDGFPE
Sbjct: 181 AGLQALSAVEIDGYWRIVDEKYMDSMLQMLLHNRILNDWSLDALDEDVIMKVMKMDGFPE 240

Query: 241 KLVQHCLHVYGDKLDEHEGKSCLWRLNEKRVCVHFAREVLRKGKMKLEHLMDEWRQKIPL 300
           KLVQHCLHVYGDKLD +EGKSCLWRL+EKRVCVHFAREVLRKGKMKLEHLMDEWRQKIPL
Sbjct: 241 KLVQHCLHVYGDKLDGNEGKSCLWRLDEKRVCVHFAREVLRKGKMKLEHLMDEWRQKIPL 300

Query: 301 GMCANFDMLEGEVLTERLGVETWVRGFRVCQLPSNPAERFTILFKERPKWEWKDLQPYIR 360
           GMCANFDMLEGEVLTERLGVETWVRGFRVCQLPSNPAERFTILFKERPKWEWKDLQPYIR
Sbjct: 301 GMCANFDMLEGEVLTERLGVETWVRGFRVCQLPSNPAERFTILFKERPKWEWKDLQPYIR 360

Query: 361 DLTVPGLSSEGLLLKYTRRTQPNPEAEAVFSAR 394
           DLTVPGLSSEGLLLKYTRRTQPNPEAEAVFSAR
Sbjct: 361 DLTVPGLSSEGLLLKYTRRTQPNPEAEAVFSAR 393

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BLAST of CsaV3_3G010280 vs. NCBI nr
Match: XP_038879383.1 (sister chromatid cohesion protein DCC1 [Benincasa hispida] >XP_038879394.1 sister chromatid cohesion protein DCC1 [Benincasa hispida])

HSP 1 Score: 731.1 bits (1886), Expect = 5.1e-207
Identity = 356/393 (90.59%), Postives = 373/393 (94.91%), Query Frame = 0


Query: 1   MEQKNPHGKGADAVLNLQPNSSISIAYHSLFGPHDDLVLLEVDEKLLEEVLHQRVSIRGQ 60
           MEQ+  HG+GADAVL+LQPNSSISIAYH LF PHDDLVLLEVDEKLLEEVLHQRVSIRGQ
Sbjct: 1   MEQQYLHGRGADAVLHLQPNSSISIAYHPLFCPHDDLVLLEVDEKLLEEVLHQRVSIRGQ 60

Query: 61  PEEDAVFCTKSKTYGIKYVGTSNSVLLIPPSGRSEYYTNELDSHQKDNSKEVAPVIKVAP 120
           PE+DAVFCTKS+TYGIKYVGTSNSVLLIPPSG SEYY NELDSHQKD +KEVA VIKVAP
Sbjct: 61  PEDDAVFCTKSRTYGIKYVGTSNSVLLIPPSGLSEYYENELDSHQKDGTKEVAHVIKVAP 120

Query: 121 GIMELHEIAPRIDKLKLLLSEEHYSFADEWENEAVDKYEKRMYNWDDLINKVQASDNELK 180
           GIMELHEIAPRIDKLKLLLSEE YS ADEWE++ VDK+EKRMYNWDDLINKVQASD+ELK
Sbjct: 121 GIMELHEIAPRIDKLKLLLSEEPYSLADEWESKEVDKHEKRMYNWDDLINKVQASDDELK 180

Query: 181 AGLQALSAVEIDGYWRIVDEKYMDSMLQMLLHNRILNDWSLDALDEGVIMNVMKMDGFPE 240
           AGLQALSAVEIDGYWR+VDEKYM+SMLQMLL+N ILNDWS DALDEGVIM VMKMDGFPE
Sbjct: 181 AGLQALSAVEIDGYWRVVDEKYMESMLQMLLNNTILNDWSPDALDEGVIMKVMKMDGFPE 240

Query: 241 KLVQHCLHVYGDKLDEHEGKSCLWRLNEKRVCVHFAREVLRKGKMKLEHLMDEWRQKIPL 300
           KLVQHCLHVYGDKLD  EGKSCLWRL+EKRVCVHFAREVLR+GKMKLEH MDEWR+KIPL
Sbjct: 241 KLVQHCLHVYGDKLDGDEGKSCLWRLDEKRVCVHFAREVLREGKMKLEHFMDEWRRKIPL 300

Query: 301 GMCANFDMLEGEVLTERLGVETWVRGFRVCQLPSNPAERFTILFKERPKWEWKDLQPYIR 360
           GM ANFDMLEGEVLTERLGVETWVRGFRVC LPSNPAERFTILF+ERPKWEWKDLQPYIR
Sbjct: 301 GMRANFDMLEGEVLTERLGVETWVRGFRVCSLPSNPAERFTILFRERPKWEWKDLQPYIR 360

Query: 361 DLTVPGLSSEGLLLKYTRRTQPNPEAEAVFSAR 394
           DLTVPGLSSEGLLLKYTRRTQ NPEAEAVFSAR
Sbjct: 361 DLTVPGLSSEGLLLKYTRRTQSNPEAEAVFSAR 393

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BLAST of CsaV3_3G010280 vs. NCBI nr
Match: XP_022974980.1 (sister chromatid cohesion protein DCC1 [Cucurbita maxima])

HSP 1 Score: 699.1 bits (1803), Expect = 2.1e-197
Identity = 337/393 (85.75%), Postives = 365/393 (92.88%), Query Frame = 0


Query: 1   MEQKNPHGKGADAVLNLQPNSSISIAYHSLFGPHDDLVLLEVDEKLLEEVLHQRVSIRGQ 60
           MEQ+NPHG+GADAVLNLQPNSS++IAYHSLFGPHDDLVLLEVDEKLLEEVLH+RVSIRGQ
Sbjct: 1   MEQQNPHGRGADAVLNLQPNSSVAIAYHSLFGPHDDLVLLEVDEKLLEEVLHERVSIRGQ 60

Query: 61  PEEDAVFCTKSKTYGIKYVGTSNSVLLIPPSGRSEYYTNELDSHQKDNSKEVAPVIKVAP 120
            EE+AVFCTKSKTYGIKYVGTSNSVLLIPPSGRSEYY NELDS   D++KEV PVIK+AP
Sbjct: 61  AEEEAVFCTKSKTYGIKYVGTSNSVLLIPPSGRSEYYENELDSQGNDSTKEVVPVIKLAP 120

Query: 121 GIMELHEIAPRIDKLKLLLSEEHYSFADEWENEAVDKYEKRMYNWDDLINKVQASDNELK 180
           GIMEL EIAPRIDKLKLLLSE  YS ADEWE+E +DK EK+MYNW+DL++KVQASD+ELK
Sbjct: 121 GIMELVEIAPRIDKLKLLLSENPYSLADEWESEEMDKCEKQMYNWNDLLDKVQASDDELK 180

Query: 181 AGLQALSAVEIDGYWRIVDEKYMDSMLQMLLHNRILNDWSLDALDEGVIMNVMKMDGFPE 240
           AGL+ALSAVEIDGYWR+VDEKYMDSMLQMLL+NRILNDWSLDALDEGV+M VMKMDGF E
Sbjct: 181 AGLRALSAVEIDGYWRLVDEKYMDSMLQMLLNNRILNDWSLDALDEGVLMKVMKMDGFSE 240

Query: 241 KLVQHCLHVYGDKLDEHEGKSCLWRLNEKRVCVHFAREVLRKGKMKLEHLMDEWRQKIPL 300
            LV HCL VYGDKL+  EG SCLWRL+EKRVCVHFAREVLRKGKMK+EH MDEW++KIP+
Sbjct: 241 TLVHHCLDVYGDKLEGDEGNSCLWRLDEKRVCVHFAREVLRKGKMKVEHFMDEWQKKIPV 300

Query: 301 GMCANFDMLEGEVLTERLGVETWVRGFRVCQLPSNPAERFTILFKERPKWEWKDLQPYIR 360
            M ANFDMLEGEVLTERLGVETWVRGFRV  LP NP ERF+ILF+ERPKWEWKDLQPYIR
Sbjct: 301 EMHANFDMLEGEVLTERLGVETWVRGFRVSSLPLNPVERFSILFRERPKWEWKDLQPYIR 360

Query: 361 DLTVPGLSSEGLLLKYTRRTQPNPEAEAVFSAR 394
           DLTVPGLSSEGLLLKYTRRTQPNPEAE VFSAR
Sbjct: 361 DLTVPGLSSEGLLLKYTRRTQPNPEAEPVFSAR 393

[Close]

BLAST of CsaV3_3G010280 vs. NCBI nr
Match: XP_022147138.1 (sister chromatid cohesion protein DCC1 [Momordica charantia] >XP_022147139.1 sister chromatid cohesion protein DCC1 [Momordica charantia] >XP_022147140.1 sister chromatid cohesion protein DCC1 [Momordica charantia] >XP_022147141.1 sister chromatid cohesion protein DCC1 [Momordica charantia] >XP_022147142.1 sister chromatid cohesion protein DCC1 [Momordica charantia])

HSP 1 Score: 696.8 bits (1797), Expect = 1.1e-196
Identity = 335/393 (85.24%), Postives = 366/393 (93.13%), Query Frame = 0


Query: 1   MEQKNPHGKGADAVLNLQPNSSISIAYHSLFGPHDDLVLLEVDEKLLEEVLHQRVSIRGQ 60
           MEQ+ P+G GADAVL+L+ NSSISIAYHSLFGPHDDLVLLEVDEKLLEEVLHQRVSIRGQ
Sbjct: 1   MEQQLPNGSGADAVLHLRTNSSISIAYHSLFGPHDDLVLLEVDEKLLEEVLHQRVSIRGQ 60

Query: 61  PEEDAVFCTKSKTYGIKYVGTSNSVLLIPPSGRSEYYTNELDSHQKDNSKEVAPVIKVAP 120
           PEEDAVFCTKSKTYGIKYVGTSNSVLLIPPSGR EYY N+LDSH KD+S++VA VIKVAP
Sbjct: 61  PEEDAVFCTKSKTYGIKYVGTSNSVLLIPPSGRLEYYENDLDSHGKDSSRKVASVIKVAP 120

Query: 121 GIMELHEIAPRIDKLKLLLSEEHYSFADEWENEAVDKYEKRMYNWDDLINKVQASDNELK 180
           GIMEL EIAPRIDKLKLLLSE+ YS ADEWE++ VDKYEK++YNWDDLINK+QASD+E+K
Sbjct: 121 GIMELVEIAPRIDKLKLLLSEKPYSLADEWESDEVDKYEKKLYNWDDLINKIQASDDEMK 180

Query: 181 AGLQALSAVEIDGYWRIVDEKYMDSMLQMLLHNRILNDWSLDALDEGVIMNVMKMDGFPE 240
           AGLQ LSAVEIDGYWR+VDEKYMDS+LQMLLHN +LNDWSLDAL+E  +M VM++DGFPE
Sbjct: 181 AGLQELSAVEIDGYWRVVDEKYMDSILQMLLHNAVLNDWSLDALNENEVMKVMEVDGFPE 240

Query: 241 KLVQHCLHVYGDKLDEHEGKSCLWRLNEKRVCVHFAREVLRKGKMKLEHLMDEWRQKIPL 300
           KLV+HCLHVYGDKLDE E KSCLWRL++KRVCVHFAREVLRKGKMKLE  MDEW +KIPL
Sbjct: 241 KLVRHCLHVYGDKLDEDECKSCLWRLDQKRVCVHFAREVLRKGKMKLESFMDEWTRKIPL 300

Query: 301 GMCANFDMLEGEVLTERLGVETWVRGFRVCQLPSNPAERFTILFKERPKWEWKDLQPYIR 360
           GM A FD+LEGEVLTER+GVETWVRGFRV  LPSNPAERF+ILFKERPKWEWKDLQPYIR
Sbjct: 301 GMRAVFDLLEGEVLTERIGVETWVRGFRVSSLPSNPAERFSILFKERPKWEWKDLQPYIR 360

Query: 361 DLTVPGLSSEGLLLKYTRRTQPNPEAEAVFSAR 394
           DLTVPGLSSEGLLLKYTRRTQPNP +E VFSAR
Sbjct: 361 DLTVPGLSSEGLLLKYTRRTQPNPNSEPVFSAR 393

[Close]

BLAST of CsaV3_3G010280 vs. ExPASy Swiss-Prot
Match: Q14AI0 (Sister chromatid cohesion protein DCC1 OS=Mus musculus OX=10090 GN=DSCC1 PE=2 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 1.0e-40
Identity = 108/350 (30.86%), Postives = 169/350 (48.29%), Query Frame = 0


Query: 36  DLVLLEVDEKLLEEV-LHQRVSIRGQPEEDAVFCTKSKTYGIKYVGTSNSVLLIPPSGRS 95
           D  LLE++  L +++       IRG  +E AV C+K KTY +K   TSN +L IP     
Sbjct: 48  DFCLLELEPALCQQLEAGDSFVIRGDKDEQAVLCSKDKTYDLKIADTSNMLLFIPGCKTP 107

Query: 96  EYYTNELDSHQKDNSKEVAPVIKVAPGIMELHEIAPRIDKLKLLLSEEHYSFADEWENEA 155
           +    +L   +  ++     +   +    EL    P++ KLK LL E  Y   D  + E 
Sbjct: 108 D----QLKEEETPSAIVHTEIFGFSNNYWELRRCRPKLKKLKRLLMENTYEGPDSQKEED 167

Query: 156 VDKYEKRMYNWDDLINKVQASDNELKAGLQALSAVEIDGYWRIVDEKYMDSMLQMLLHNR 215
             + +   Y  +DL+N +QAS+ E+ A LQ L+A EI GYWRI++  Y   +L  +    
Sbjct: 168 ASRSK---YTTEDLLNHIQASEEEIMAQLQVLNACEIGGYWRILEFDYEIKLLNHVTQLV 227

Query: 216 ILNDWSLDALDEGVIMNVMKMDGFPEKLVQHCLHVYGDKLDEHEGKSCLWRLNEKRVCVH 275
               WSLD +   V +  +     PE++++HCL  YG +  + +     + L+  ++C  
Sbjct: 228 DSESWSLDRVPLTVCLQELG-PLEPEEMIEHCLKCYGKRYVDKD--DVYFELDADKICRV 287

Query: 276 FAREVLRKG-KMKLEHLMDEWRQKIPLGMCANFDMLEGEVLTERLGVETWVRGFRVCQLP 335
            A  +L+   K  L    + W+Q +P GM    D L+G  L +R      +   +V  LP
Sbjct: 288 TAEMLLQNAVKFNLAEFQEVWQQSVPEGMTTRLDQLKGLALVDRNSRPEIIFLLKVDDLP 347

Query: 336 SNPAERFTILFKERPKWEWKDLQPYIRDLTVPGLSSEGLLLKYTRRTQPN 384
               +RF  LF  R KW  +D+ PYI+DL     +   LL KY+R +  N
Sbjct: 348 EGTQDRFNSLFSLREKWTEEDITPYIQDLCGEKQTIGALLTKYSRSSMQN 387

[Close]

BLAST of CsaV3_3G010280 vs. ExPASy Swiss-Prot
Match: Q66I84 (Sister chromatid cohesion protein DCC1 OS=Danio rerio OX=7955 GN=dscc1 PE=2 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.5e-39
Identity = 115/373 (30.83%), Postives = 180/373 (48.26%), Query Frame = 0


Query: 16  NLQPNSSISIAYHSLFGPH---DDLVLLEVDEKLLEEV-LHQRVSIRGQPEEDAVFCTKS 75
           +LQP     + Y   FG +    D  L+EVDE L + +   + + IRG  +E AV C++ 
Sbjct: 20  DLQP-----VTYCLSFGDNVSSGDYCLMEVDENLCKHIESGKSLIIRGDKDEHAVLCSED 79

Query: 76  KTYGIKYVGTSNSVLLIPPSGRSEYYTNELDSHQKDNSKEVAPVIKVAPGIMELHEIAPR 135
           KTY +K   TSN +L +P     +  ++   S Q  +++    +   +    EL    PR
Sbjct: 80  KTYDLKIADTSNLLLFVPGCKTPDQLSDIPASPQLMHTQ----IWGFSNCYWELRRQRPR 139

Query: 136 IDKLKLLLSEEHYSFADEWENEAVDKYEKRMYNWDDLINKVQASDNELKAGLQALSAVEI 195
           + KLK LL E  Y        E     +   Y+ +DL+ ++QAS  EL+A L  + A EI
Sbjct: 140 LKKLKKLLMENPYDGPPVGMQEEAPGLK---YSMEDLLERIQASKEELEAHLGNVHACEI 199

Query: 196 DGYWRIVDEKYMDSMLQMLLHNRILNDWSLDALDEGVIMNVMKMDGFPEKLVQHCLHVYG 255
           DG+WRI+D  Y   +L  +        WS   +   V +  +     P+ +++HCL+ YG
Sbjct: 200 DGFWRILDFDYEMKLLGHVTQLVDSESWSFSKVPLSVCLEELG-SLEPKAMIEHCLNCYG 259

Query: 256 DKLDEHEGKSCLWRLNEKRVCVHFAREVLRKG-KMKLEHLMDEWRQKIPLGMCANFDMLE 315
            +  + E    ++ L+E +VC   A+ +L+   K  L    + W+Q +P GM    D L 
Sbjct: 260 RRHSD-EDNQVMYALDEDKVCRATAQLLLQNAVKFNLSEFQEVWQQSVPEGMGTRLDQLR 319

Query: 316 GEVLTERLGVETWVRGFRVCQLPSNPAERFTILFKERPKWEWKDLQPYIRDLTVPGLSSE 375
           G  L +R      +   RV  LP +  ERF  LF  R KW   D++PYI+DL     ++ 
Sbjct: 320 GLALIDRSSKPETISLLRVEDLPEDTLERFNSLFSLREKWTQDDIEPYIQDLCGEKQTTG 378

Query: 376 GLLLKYTRRTQPN 384
            LL K+ R +  N
Sbjct: 380 ALLTKHARSSMQN 378

[Close]

BLAST of CsaV3_3G010280 vs. ExPASy Swiss-Prot
Match: Q9BVC3 (Sister chromatid cohesion protein DCC1 OS=Homo sapiens OX=9606 GN=DSCC1 PE=1 SV=2)

HSP 1 Score: 164.5 bits (415), Expect = 2.5e-39
Identity = 119/384 (30.99%), Postives = 184/384 (47.92%), Query Frame = 0


Query: 12  DAVLNLQPNSSISI--AYHSL-FGP------HDDLVLLEVDEKLLEEVLH-QRVSIRGQP 71
           DA L +   ++  +  A H L FGP        D  LLE++  L +++     + IRG  
Sbjct: 9   DATLQIAKLNAAELLPAVHCLGFGPGASGAAAGDFCLLELEPTLCQQLEDGHSLVIRGDK 68

Query: 72  EEDAVFCTKSKTYGIKYVGTSNSVLLIPPSGRSEYYTNELDSHQKDNSKEVAPVIKVAPG 131
           +E AV C+K KTY +K   TSN +L IP     +    E DSH      E   +   +  
Sbjct: 69  DEQAVLCSKDKTYDLKIADTSNMLLFIPGCKTPDQLKKE-DSHCNIIHTE---IFGFSNN 128

Query: 132 IMELHEIAPRIDKLKLLLSEEHYSFADEWENEAVDKYEKRMYNWDDLINKVQASDNELKA 191
             EL    P++ KLK LL E  Y   D  + +  +  +   Y  +DL++++QAS+ E+  
Sbjct: 129 YWELRRRRPKLKKLKKLLMENPYEGPDSQKEKDSNSSK---YTTEDLLDQIQASEEEIMT 188

Query: 192 GLQALSAVEIDGYWRIVDEKYMDSMLQMLLHNRILNDWSLDALDEGVIMNVMKMDGFPEK 251
            LQ L+A +I GYWRI++  Y   +L  +        WS   +     +  +     PE+
Sbjct: 189 QLQVLNACKIGGYWRILEFDYEMKLLNHVTQLVDSESWSFGKVPLNTCLQELG-PLEPEE 248

Query: 252 LVQHCLHVYGDK-LDEHEGKSCLWRLNEKRVCVHFAREVLRKG-KMKLEHLMDEWRQKIP 311
           +++HCL  YG K +DE E     + L+  ++C   AR +L+   K  L    + W+Q +P
Sbjct: 249 MIEHCLKCYGKKYVDEGE---VYFELDADKICRAAARMLLQNAVKFNLAEFQEVWQQSVP 308

Query: 312 LGMCANFDMLEGEVLTERLGVETWVRGFRVCQLPSNPAERFTILFKERPKWEWKDLQPYI 371
            GM  + D L+G  L +R      +   +V  LP +  ERF  LF  R KW  +D+ PYI
Sbjct: 309 EGMVTSLDQLKGLALVDRHSRPEIIFLLKVDDLPEDNQERFNSLFSLREKWTEEDIAPYI 368

Query: 372 RDLTVPGLSSEGLLLKYTRRTQPN 384
           +DL     +   LL KY+  +  N
Sbjct: 369 QDLCGEKQTIGALLTKYSHSSMQN 381

[Close]

BLAST of CsaV3_3G010280 vs. ExPASy Swiss-Prot
Match: Q6GMB0 (Sister chromatid cohesion protein DCC1 OS=Xenopus laevis OX=8355 GN=dscc1 PE=2 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 3.2e-39
Identity = 109/350 (31.14%), Postives = 170/350 (48.57%), Query Frame = 0


Query: 36  DLVLLEVDEKLLEEV-LHQRVSIRGQPEEDAVFCTKSKTYGIKYVGTSNSVLLIPPSGRS 95
           D  L+E+D+ L +++     + IRG   + AV C++ KTY +K   TSN +L IP     
Sbjct: 39  DYSLMELDDTLCKQIEAGDSLVIRGDKSDHAVLCSQDKTYDLKIADTSNLLLFIPGC--- 98

Query: 96  EYYTNELDSHQKDNSKEVAPVIKVAPGIMELHEIAPRIDKLKLLLSEEHYSFADEWENEA 155
               ++L + Q+  S     +   +    EL    P++ KLK LL E  Y+     ENE+
Sbjct: 99  -KLPDQLPADQQPLSVIHCEIAGFSNHYWELRRCRPKLKKLKKLLMENTYNGP---ENES 158

Query: 156 VDKYEKRMYNWDDLINKVQASDNELKAGLQALSAVEIDGYWRIVDEKYMDSMLQMLLHNR 215
               E  +Y  +DL++ +Q+S  EL   L+A+ A  I G WR++D  Y   +L  +    
Sbjct: 159 ESSQETSLYTTEDLLSVIQSSTEELMDHLKAIHACNIKGIWRLLDFDYEMKLLNHITQLI 218

Query: 216 ILNDWSLDALDEGVIMNVMKMDGFPEKLVQHCLHVYGDKLDEHEGKSCLWRLNEKRVCVH 275
               WS   +   V +  ++    PE++++HCL  YG +L E EG  C + L+E ++C  
Sbjct: 219 DSESWSFSKVPLQVCLQELR-SLEPEEMIEHCLTCYGKRLME-EGGDC-FALDEDKICRA 278

Query: 276 FAREVLRKG-KMKLEHLMDEWRQKIPLGMCANFDMLEGEVLTERLGVETWVRGFRVCQLP 335
            A  +L+   K  L    + W+Q +P GM    D L+G  L +R      +   +   LP
Sbjct: 279 TALMLLQNAVKFNLAEFQEVWQQSVPDGMNTRLDQLKGLALVDRTSRPETIFLLQTEDLP 338

Query: 336 SNPAERFTILFKERPKWEWKDLQPYIRDLTVPGLSSEGLLLKYTRRTQPN 384
            +  ERF  LF  R KW   D+ PYI+DL     +   LL KY R +  N
Sbjct: 339 EDTQERFNTLFGMREKWTEADIAPYIQDLCGEKQTIGALLTKYARSSMQN 378

[Close]

BLAST of CsaV3_3G010280 vs. ExPASy Swiss-Prot
Match: Q6GL75 (Sister chromatid cohesion protein DCC1 OS=Xenopus tropicalis OX=8364 GN=dscc1 PE=2 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 1.6e-38
Identity = 105/350 (30.00%), Postives = 170/350 (48.57%), Query Frame = 0


Query: 36  DLVLLEVDEKLLEEV-LHQRVSIRGQPEEDAVFCTKSKTYGIKYVGTSNSVLLIPPSGRS 95
           D  L+E+D+ L +++     + IRG   + AV C++ KTY +K   TSN +L IP     
Sbjct: 39  DYSLMELDDTLCKQIEAGDSLVIRGDKSDHAVLCSQDKTYDLKIADTSNLLLFIPGCKTP 98

Query: 96  EYYTNELDSHQKDNSKEVAPVIKVAPGIMELHEIAPRIDKLKLLLSEEHYSFADEWENEA 155
           +    +L + Q+  +     +   +    EL    P++ KLK LL E  Y+   E E E+
Sbjct: 99  D----QLPADQQPLTIINCEIAGFSNHYWELRRCRPKLKKLKKLLMENTYN-GPENERES 158

Query: 156 VDKYEKRMYNWDDLINKVQASDNELKAGLQALSAVEIDGYWRIVDEKYMDSMLQMLLHNR 215
            D     ++  +DL+N +QAS+ EL   L+A+ A  I+G+WR++D  Y   +L  +    
Sbjct: 159 QD---NSLHTTEDLLNMIQASNEELVDHLKAIHACSINGFWRLLDFDYEMKLLNHITQLI 218

Query: 216 ILNDWSLDALDEGVIMNVMKMDGFPEKLVQHCLHVYGDKLDEHEGKSCLWRLNEKRVCVH 275
               WS   +   V +  ++    PE++++HCL  YG +L +       + L+E ++C  
Sbjct: 219 DSESWSFSKVPLPVCLQELR-SLEPEEMIEHCLTCYGKRLIDEGTGGDFFALDEDKICRA 278

Query: 276 FAREVLRKG-KMKLEHLMDEWRQKIPLGMCANFDMLEGEVLTERLGVETWVRGFRVCQLP 335
            A  +L+   K  L    + W+Q +P GM    D L+G  L +R      +   +   LP
Sbjct: 279 TALMLLQNAVKFNLAEFQEVWQQSVPEGMNTRLDQLKGLALVDRTSRPETIFLLKTEDLP 338

Query: 336 SNPAERFTILFKERPKWEWKDLQPYIRDLTVPGLSSEGLLLKYTRRTQPN 384
            +  ERF  LF  R KW   D+ PYI+DL     +   LL KY R +  N
Sbjct: 339 EDTQERFNTLFGMREKWAEADIAPYIKDLCGEKQTIGALLTKYARSSMQN 379

[Close]

BLAST of CsaV3_3G010280 vs. ExPASy TrEMBL
Match: A0A0A0L4H9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G127250 PE=3 SV=1)

HSP 1 Score: 813.1 bits (2099), Expect = 4.9e-232
Identity = 393/393 (100.00%), Postives = 393/393 (100.00%), Query Frame = 0


Query: 1   MEQKNPHGKGADAVLNLQPNSSISIAYHSLFGPHDDLVLLEVDEKLLEEVLHQRVSIRGQ 60
           MEQKNPHGKGADAVLNLQPNSSISIAYHSLFGPHDDLVLLEVDEKLLEEVLHQRVSIRGQ
Sbjct: 1   MEQKNPHGKGADAVLNLQPNSSISIAYHSLFGPHDDLVLLEVDEKLLEEVLHQRVSIRGQ 60

Query: 61  PEEDAVFCTKSKTYGIKYVGTSNSVLLIPPSGRSEYYTNELDSHQKDNSKEVAPVIKVAP 120
           PEEDAVFCTKSKTYGIKYVGTSNSVLLIPPSGRSEYYTNELDSHQKDNSKEVAPVIKVAP
Sbjct: 61  PEEDAVFCTKSKTYGIKYVGTSNSVLLIPPSGRSEYYTNELDSHQKDNSKEVAPVIKVAP 120

Query: 121 GIMELHEIAPRIDKLKLLLSEEHYSFADEWENEAVDKYEKRMYNWDDLINKVQASDNELK 180
           GIMELHEIAPRIDKLKLLLSEEHYSFADEWENEAVDKYEKRMYNWDDLINKVQASDNELK
Sbjct: 121 GIMELHEIAPRIDKLKLLLSEEHYSFADEWENEAVDKYEKRMYNWDDLINKVQASDNELK 180

Query: 181 AGLQALSAVEIDGYWRIVDEKYMDSMLQMLLHNRILNDWSLDALDEGVIMNVMKMDGFPE 240
           AGLQALSAVEIDGYWRIVDEKYMDSMLQMLLHNRILNDWSLDALDEGVIMNVMKMDGFPE
Sbjct: 181 AGLQALSAVEIDGYWRIVDEKYMDSMLQMLLHNRILNDWSLDALDEGVIMNVMKMDGFPE 240

Query: 241 KLVQHCLHVYGDKLDEHEGKSCLWRLNEKRVCVHFAREVLRKGKMKLEHLMDEWRQKIPL 300
           KLVQHCLHVYGDKLDEHEGKSCLWRLNEKRVCVHFAREVLRKGKMKLEHLMDEWRQKIPL
Sbjct: 241 KLVQHCLHVYGDKLDEHEGKSCLWRLNEKRVCVHFAREVLRKGKMKLEHLMDEWRQKIPL 300

Query: 301 GMCANFDMLEGEVLTERLGVETWVRGFRVCQLPSNPAERFTILFKERPKWEWKDLQPYIR 360
           GMCANFDMLEGEVLTERLGVETWVRGFRVCQLPSNPAERFTILFKERPKWEWKDLQPYIR
Sbjct: 301 GMCANFDMLEGEVLTERLGVETWVRGFRVCQLPSNPAERFTILFKERPKWEWKDLQPYIR 360

Query: 361 DLTVPGLSSEGLLLKYTRRTQPNPEAEAVFSAR 394
           DLTVPGLSSEGLLLKYTRRTQPNPEAEAVFSAR
Sbjct: 361 DLTVPGLSSEGLLLKYTRRTQPNPEAEAVFSAR 393

[Close]

BLAST of CsaV3_3G010280 vs. ExPASy TrEMBL
Match: A0A5D3CZT5 (Sister chromatid cohesion protein DCC1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G003360 PE=3 SV=1)

HSP 1 Score: 784.3 bits (2024), Expect = 2.4e-223
Identity = 380/393 (96.69%), Postives = 386/393 (98.22%), Query Frame = 0


Query: 1   MEQKNPHGKGADAVLNLQPNSSISIAYHSLFGPHDDLVLLEVDEKLLEEVLHQRVSIRGQ 60
           MEQ+NPHG+GADAVLNLQPNSSISIAYHSLFGPHDDLVLLEVDEKLLEEVLHQRVSIRGQ
Sbjct: 1   MEQQNPHGRGADAVLNLQPNSSISIAYHSLFGPHDDLVLLEVDEKLLEEVLHQRVSIRGQ 60

Query: 61  PEEDAVFCTKSKTYGIKYVGTSNSVLLIPPSGRSEYYTNELDSHQKDNSKEVAPVIKVAP 120
           PEEDAVFCTKSKTYGIKYVGTSNSVLLIPPSGRSEYY NELDSHQ DNSKEVAPVIKVAP
Sbjct: 61  PEEDAVFCTKSKTYGIKYVGTSNSVLLIPPSGRSEYYKNELDSHQTDNSKEVAPVIKVAP 120

Query: 121 GIMELHEIAPRIDKLKLLLSEEHYSFADEWENEAVDKYEKRMYNWDDLINKVQASDNELK 180
           GIMELHEIAPRIDKLKLLLSEE YSFADEWENEA DKYEKRMY+WDDLINKVQASD+ELK
Sbjct: 121 GIMELHEIAPRIDKLKLLLSEEPYSFADEWENEAADKYEKRMYSWDDLINKVQASDDELK 180

Query: 181 AGLQALSAVEIDGYWRIVDEKYMDSMLQMLLHNRILNDWSLDALDEGVIMNVMKMDGFPE 240
           AGLQALSAVEIDGYWRIVDEKYMDSMLQMLLHNRILNDWSLDALDE VIM VMKMDGFPE
Sbjct: 181 AGLQALSAVEIDGYWRIVDEKYMDSMLQMLLHNRILNDWSLDALDEDVIMKVMKMDGFPE 240

Query: 241 KLVQHCLHVYGDKLDEHEGKSCLWRLNEKRVCVHFAREVLRKGKMKLEHLMDEWRQKIPL 300
           KLVQHCLHVYGDKLD +EGKSCLWRL+EKRVCVHFAREVLRKGKMKLEHLMDEWRQKIPL
Sbjct: 241 KLVQHCLHVYGDKLDGNEGKSCLWRLDEKRVCVHFAREVLRKGKMKLEHLMDEWRQKIPL 300

Query: 301 GMCANFDMLEGEVLTERLGVETWVRGFRVCQLPSNPAERFTILFKERPKWEWKDLQPYIR 360
           GMCANFDMLEGEVLTERLGVETWVRGFRVCQLPSNPAERFTILFKERPKWEWKDLQPYIR
Sbjct: 301 GMCANFDMLEGEVLTERLGVETWVRGFRVCQLPSNPAERFTILFKERPKWEWKDLQPYIR 360

Query: 361 DLTVPGLSSEGLLLKYTRRTQPNPEAEAVFSAR 394
           DLTVPGLSSEGLLLKYTRRTQPNPEAEAVFSAR
Sbjct: 361 DLTVPGLSSEGLLLKYTRRTQPNPEAEAVFSAR 393

[Close]

BLAST of CsaV3_3G010280 vs. ExPASy TrEMBL
Match: A0A1S3AWK7 (sister chromatid cohesion protein DCC1 OS=Cucumis melo OX=3656 GN=LOC103483416 PE=3 SV=1)

HSP 1 Score: 784.3 bits (2024), Expect = 2.4e-223
Identity = 380/393 (96.69%), Postives = 386/393 (98.22%), Query Frame = 0


Query: 1   MEQKNPHGKGADAVLNLQPNSSISIAYHSLFGPHDDLVLLEVDEKLLEEVLHQRVSIRGQ 60
           MEQ+NPHG+GADAVLNLQPNSSISIAYHSLFGPHDDLVLLEVDEKLLEEVLHQRVSIRGQ
Sbjct: 1   MEQQNPHGRGADAVLNLQPNSSISIAYHSLFGPHDDLVLLEVDEKLLEEVLHQRVSIRGQ 60

Query: 61  PEEDAVFCTKSKTYGIKYVGTSNSVLLIPPSGRSEYYTNELDSHQKDNSKEVAPVIKVAP 120
           PEEDAVFCTKSKTYGIKYVGTSNSVLLIPPSGRSEYY NELDSHQ DNSKEVAPVIKVAP
Sbjct: 61  PEEDAVFCTKSKTYGIKYVGTSNSVLLIPPSGRSEYYKNELDSHQTDNSKEVAPVIKVAP 120

Query: 121 GIMELHEIAPRIDKLKLLLSEEHYSFADEWENEAVDKYEKRMYNWDDLINKVQASDNELK 180
           GIMELHEIAPRIDKLKLLLSEE YSFADEWENEA DKYEKRMY+WDDLINKVQASD+ELK
Sbjct: 121 GIMELHEIAPRIDKLKLLLSEEPYSFADEWENEAADKYEKRMYSWDDLINKVQASDDELK 180

Query: 181 AGLQALSAVEIDGYWRIVDEKYMDSMLQMLLHNRILNDWSLDALDEGVIMNVMKMDGFPE 240
           AGLQALSAVEIDGYWRIVDEKYMDSMLQMLLHNRILNDWSLDALDE VIM VMKMDGFPE
Sbjct: 181 AGLQALSAVEIDGYWRIVDEKYMDSMLQMLLHNRILNDWSLDALDEDVIMKVMKMDGFPE 240

Query: 241 KLVQHCLHVYGDKLDEHEGKSCLWRLNEKRVCVHFAREVLRKGKMKLEHLMDEWRQKIPL 300
           KLVQHCLHVYGDKLD +EGKSCLWRL+EKRVCVHFAREVLRKGKMKLEHLMDEWRQKIPL
Sbjct: 241 KLVQHCLHVYGDKLDGNEGKSCLWRLDEKRVCVHFAREVLRKGKMKLEHLMDEWRQKIPL 300

Query: 301 GMCANFDMLEGEVLTERLGVETWVRGFRVCQLPSNPAERFTILFKERPKWEWKDLQPYIR 360
           GMCANFDMLEGEVLTERLGVETWVRGFRVCQLPSNPAERFTILFKERPKWEWKDLQPYIR
Sbjct: 301 GMCANFDMLEGEVLTERLGVETWVRGFRVCQLPSNPAERFTILFKERPKWEWKDLQPYIR 360

Query: 361 DLTVPGLSSEGLLLKYTRRTQPNPEAEAVFSAR 394
           DLTVPGLSSEGLLLKYTRRTQPNPEAEAVFSAR
Sbjct: 361 DLTVPGLSSEGLLLKYTRRTQPNPEAEAVFSAR 393

[Close]

BLAST of CsaV3_3G010280 vs. ExPASy TrEMBL
Match: A0A6J1IFE0 (sister chromatid cohesion protein DCC1 OS=Cucurbita maxima OX=3661 GN=LOC111473829 PE=3 SV=1)

HSP 1 Score: 699.1 bits (1803), Expect = 1.0e-197
Identity = 337/393 (85.75%), Postives = 365/393 (92.88%), Query Frame = 0


Query: 1   MEQKNPHGKGADAVLNLQPNSSISIAYHSLFGPHDDLVLLEVDEKLLEEVLHQRVSIRGQ 60
           MEQ+NPHG+GADAVLNLQPNSS++IAYHSLFGPHDDLVLLEVDEKLLEEVLH+RVSIRGQ
Sbjct: 1   MEQQNPHGRGADAVLNLQPNSSVAIAYHSLFGPHDDLVLLEVDEKLLEEVLHERVSIRGQ 60

Query: 61  PEEDAVFCTKSKTYGIKYVGTSNSVLLIPPSGRSEYYTNELDSHQKDNSKEVAPVIKVAP 120
            EE+AVFCTKSKTYGIKYVGTSNSVLLIPPSGRSEYY NELDS   D++KEV PVIK+AP
Sbjct: 61  AEEEAVFCTKSKTYGIKYVGTSNSVLLIPPSGRSEYYENELDSQGNDSTKEVVPVIKLAP 120

Query: 121 GIMELHEIAPRIDKLKLLLSEEHYSFADEWENEAVDKYEKRMYNWDDLINKVQASDNELK 180
           GIMEL EIAPRIDKLKLLLSE  YS ADEWE+E +DK EK+MYNW+DL++KVQASD+ELK
Sbjct: 121 GIMELVEIAPRIDKLKLLLSENPYSLADEWESEEMDKCEKQMYNWNDLLDKVQASDDELK 180

Query: 181 AGLQALSAVEIDGYWRIVDEKYMDSMLQMLLHNRILNDWSLDALDEGVIMNVMKMDGFPE 240
           AGL+ALSAVEIDGYWR+VDEKYMDSMLQMLL+NRILNDWSLDALDEGV+M VMKMDGF E
Sbjct: 181 AGLRALSAVEIDGYWRLVDEKYMDSMLQMLLNNRILNDWSLDALDEGVLMKVMKMDGFSE 240

Query: 241 KLVQHCLHVYGDKLDEHEGKSCLWRLNEKRVCVHFAREVLRKGKMKLEHLMDEWRQKIPL 300
            LV HCL VYGDKL+  EG SCLWRL+EKRVCVHFAREVLRKGKMK+EH MDEW++KIP+
Sbjct: 241 TLVHHCLDVYGDKLEGDEGNSCLWRLDEKRVCVHFAREVLRKGKMKVEHFMDEWQKKIPV 300

Query: 301 GMCANFDMLEGEVLTERLGVETWVRGFRVCQLPSNPAERFTILFKERPKWEWKDLQPYIR 360
            M ANFDMLEGEVLTERLGVETWVRGFRV  LP NP ERF+ILF+ERPKWEWKDLQPYIR
Sbjct: 301 EMHANFDMLEGEVLTERLGVETWVRGFRVSSLPLNPVERFSILFRERPKWEWKDLQPYIR 360

Query: 361 DLTVPGLSSEGLLLKYTRRTQPNPEAEAVFSAR 394
           DLTVPGLSSEGLLLKYTRRTQPNPEAE VFSAR
Sbjct: 361 DLTVPGLSSEGLLLKYTRRTQPNPEAEPVFSAR 393

[Close]

BLAST of CsaV3_3G010280 vs. ExPASy TrEMBL
Match: A0A6J1CZB2 (sister chromatid cohesion protein DCC1 OS=Momordica charantia OX=3673 GN=LOC111016141 PE=3 SV=1)

HSP 1 Score: 696.8 bits (1797), Expect = 5.1e-197
Identity = 335/393 (85.24%), Postives = 366/393 (93.13%), Query Frame = 0


Query: 1   MEQKNPHGKGADAVLNLQPNSSISIAYHSLFGPHDDLVLLEVDEKLLEEVLHQRVSIRGQ 60
           MEQ+ P+G GADAVL+L+ NSSISIAYHSLFGPHDDLVLLEVDEKLLEEVLHQRVSIRGQ
Sbjct: 1   MEQQLPNGSGADAVLHLRTNSSISIAYHSLFGPHDDLVLLEVDEKLLEEVLHQRVSIRGQ 60

Query: 61  PEEDAVFCTKSKTYGIKYVGTSNSVLLIPPSGRSEYYTNELDSHQKDNSKEVAPVIKVAP 120
           PEEDAVFCTKSKTYGIKYVGTSNSVLLIPPSGR EYY N+LDSH KD+S++VA VIKVAP
Sbjct: 61  PEEDAVFCTKSKTYGIKYVGTSNSVLLIPPSGRLEYYENDLDSHGKDSSRKVASVIKVAP 120

Query: 121 GIMELHEIAPRIDKLKLLLSEEHYSFADEWENEAVDKYEKRMYNWDDLINKVQASDNELK 180
           GIMEL EIAPRIDKLKLLLSE+ YS ADEWE++ VDKYEK++YNWDDLINK+QASD+E+K
Sbjct: 121 GIMELVEIAPRIDKLKLLLSEKPYSLADEWESDEVDKYEKKLYNWDDLINKIQASDDEMK 180

Query: 181 AGLQALSAVEIDGYWRIVDEKYMDSMLQMLLHNRILNDWSLDALDEGVIMNVMKMDGFPE 240
           AGLQ LSAVEIDGYWR+VDEKYMDS+LQMLLHN +LNDWSLDAL+E  +M VM++DGFPE
Sbjct: 181 AGLQELSAVEIDGYWRVVDEKYMDSILQMLLHNAVLNDWSLDALNENEVMKVMEVDGFPE 240

Query: 241 KLVQHCLHVYGDKLDEHEGKSCLWRLNEKRVCVHFAREVLRKGKMKLEHLMDEWRQKIPL 300
           KLV+HCLHVYGDKLDE E KSCLWRL++KRVCVHFAREVLRKGKMKLE  MDEW +KIPL
Sbjct: 241 KLVRHCLHVYGDKLDEDECKSCLWRLDQKRVCVHFAREVLRKGKMKLESFMDEWTRKIPL 300

Query: 301 GMCANFDMLEGEVLTERLGVETWVRGFRVCQLPSNPAERFTILFKERPKWEWKDLQPYIR 360
           GM A FD+LEGEVLTER+GVETWVRGFRV  LPSNPAERF+ILFKERPKWEWKDLQPYIR
Sbjct: 301 GMRAVFDLLEGEVLTERIGVETWVRGFRVSSLPSNPAERFSILFKERPKWEWKDLQPYIR 360

Query: 361 DLTVPGLSSEGLLLKYTRRTQPNPEAEAVFSAR 394
           DLTVPGLSSEGLLLKYTRRTQPNP +E VFSAR
Sbjct: 361 DLTVPGLSSEGLLLKYTRRTQPNPNSEPVFSAR 393

[Close]

BLAST of CsaV3_3G010280 vs. TAIR 10
Match: AT2G44580.1 (zinc ion binding )

HSP 1 Score: 431.8 bits (1109), Expect = 5.9e-121
Identity = 211/392 (53.83%), Postives = 281/392 (71.68%), Query Frame = 0


Query: 10  GADAVLNLQPNSSISIAYHSLFGPHDDLVLLEVDEKLLEEVLHQRVSIRGQPEEDAVFCT 69
           GA+AV+NL+   S+ I+YH  FGPH+DL+LLE D+KL+ ++ HQRV++RG P+EDAV CT
Sbjct: 6   GAEAVINLKSGYSLPISYHPCFGPHEDLLLLEADDKLVSDIFHQRVTLRGLPDEDAVLCT 65

Query: 70  KSKTYGIKYVGTSNSVLLIPPSGRSEYYTNELDSHQKDNSKEVAPVIKVAPGIMELHEIA 129
           KSKTY IK+VG SNS+ LIPPS          D+   D +  V+ V+K+APG MEL E +
Sbjct: 66  KSKTYAIKFVGNSNSMFLIPPS------IFPGDAQVSDTNNNVS-VLKIAPGNMELVEAS 125

Query: 130 PRIDKLKLLLSEEHYSFAD-----EWENEAVD---KYEKRMYNWDDLINKVQASDNELKA 189
           PR+DKLK +L    +   +     + +N+ +D   K +  +Y W DL+N VQASD EL+ 
Sbjct: 126 PRLDKLKQILLANPFGAGEVEAMMDVDNDDLDHSGKKDLALYTWSDLVNTVQASDEELRN 185

Query: 190 GLQALSAVEIDGYWRIVDEKYMDSMLQMLLHNRILNDWSLDALDEGVIMNVMKMDGFPEK 249
           GLQ+LSA+EIDG+WR++DE Y+D +L+MLLHN +L DWS D LDE  ++N +  D FP +
Sbjct: 186 GLQSLSAIEIDGFWRVIDENYLDVILRMLLHNCVLKDWSFDDLDEDEVVNALVADEFPSQ 245

Query: 250 LVQHCLHVYGDKLDEHEGKSCLWRLNEKRVCVHFAREVLRKGKMKLEHLMDEWRQKIPLG 309
           L  HCL V+G K++E +     W+L  + VC+HFAR++LR+ KM+LE  M+EW++KIP G
Sbjct: 246 LASHCLRVFGSKVNETD----KWKLEPRLVCLHFARQILREEKMRLESFMEEWKKKIPDG 305

Query: 310 MCANFDMLEGEVLTERLGVETWVRGFRVCQLPSNPAERFTILFKERPKWEWKDLQPYIRD 369
           M   F+MLEGEVLTE++G+ET V  F V  LPS P ERF++LFK R KWEWKDL+PY+RD
Sbjct: 306 MEERFEMLEGEVLTEKIGIETRVYTFSVRSLPSTPEERFSVLFKHRSKWEWKDLEPYLRD 365

Query: 370 LTVPGLSSEGLLLKYTRRTQPNPEAEAVFSAR 394
           L VP LS EGLLLKYTRR QP  +A  VFSAR
Sbjct: 366 LHVPRLSMEGLLLKYTRRAQPKADAPPVFSAR 386

The following BLAST results are available for this feature:

BLAST of CsaV3_3G010280 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004133954.1	1.0e-231	100.00	sister chromatid cohesion protein DCC1 [Cucumis sativus] >KGN56663.1 hypothetica...	[more]
XP_008438251.1	5.1e-223	96.69	PREDICTED: sister chromatid cohesion protein DCC1 [Cucumis melo] >KAA0049092.1 s...	[more]
XP_038879383.1	5.1e-207	90.59	sister chromatid cohesion protein DCC1 [Benincasa hispida] >XP_038879394.1 siste...	[more]
XP_022974980.1	2.1e-197	85.75	sister chromatid cohesion protein DCC1 [Cucurbita maxima]	[more]
XP_022147138.1	1.1e-196	85.24	sister chromatid cohesion protein DCC1 [Momordica charantia] >XP_022147139.1 sis...	[more]

BLAST of CsaV3_3G010280 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q14AI0	1.0e-40	30.86	Sister chromatid cohesion protein DCC1 OS=Mus musculus OX=10090 GN=DSCC1 PE=2 SV...	[more]
Q66I84	1.5e-39	30.83	Sister chromatid cohesion protein DCC1 OS=Danio rerio OX=7955 GN=dscc1 PE=2 SV=1	[more]
Q9BVC3	2.5e-39	30.99	Sister chromatid cohesion protein DCC1 OS=Homo sapiens OX=9606 GN=DSCC1 PE=1 SV=...	[more]
Q6GMB0	3.2e-39	31.14	Sister chromatid cohesion protein DCC1 OS=Xenopus laevis OX=8355 GN=dscc1 PE=2 S...	[more]
Q6GL75	1.6e-38	30.00	Sister chromatid cohesion protein DCC1 OS=Xenopus tropicalis OX=8364 GN=dscc1 PE...	[more]

BLAST of CsaV3_3G010280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L4H9	4.9e-232	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G127250 PE=3 SV=1	[more]
A0A5D3CZT5	2.4e-223	96.69	Sister chromatid cohesion protein DCC1 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3AWK7	2.4e-223	96.69	sister chromatid cohesion protein DCC1 OS=Cucumis melo OX=3656 GN=LOC103483416 P...	[more]
A0A6J1IFE0	1.0e-197	85.75	sister chromatid cohesion protein DCC1 OS=Cucurbita maxima OX=3661 GN=LOC1114738...	[more]
A0A6J1CZB2	5.1e-197	85.24	sister chromatid cohesion protein DCC1 OS=Momordica charantia OX=3673 GN=LOC1110...	[more]

BLAST of CsaV3_3G010280 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G44580.1	5.9e-121	53.83	zinc ion binding	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019128	Sister chromatid cohesion protein Dcc1	PFAM	PF09724	Dcc1	coord: 38..359 e-value: 1.1E-89 score: 301.1
IPR019128	Sister chromatid cohesion protein Dcc1	PANTHER	PTHR13395	SISTER CHROMATID COHESION PROTEIN DCC1-RELATED	coord: 10..393

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G010280.1	CsaV3_3G010280.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007064	mitotic sister chromatid cohesion
cellular_component	GO:0031390	Ctf18 RFC-like complex