CsaV3_3G009400 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G009400
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionMADS-box protein
Locationchr3: 7691745 .. 7696776 (+)
RNA-Seq ExpressionCsaV3_3G009400
SyntenyCsaV3_3G009400
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GAGTGAAATGTGATTGGCTTAAAAGAAGAAATAATTAATGAAAATAATAATACAAAACGTGGGTGTGGTCTGTTGTTTCCTCCCATCCATTTTTGGTGGTGGGAATCAAAACACATCTCTTCTTTTATTTATTTACCTTTTTCTTCCTCTGGGTTTTCAGATTCTTCCCCAAATTTGTTTCCTTTTTTGCTCTCTCAAACACTTTTCCCTTCTTAGGGTTTGTAAGGATACAAAAAAAAAAAAAAAAAAAAACATTTTAAAATAACAAAACGAAACAAATTTCCAAATTTGCCATTTTTGTTGTTGCTGTTTTCTTCTTCTTTGAAATCAATCCCTTCCCATTTCAGGAGTTGAGTTTAGCAGTTTCTTTCATTAAGTTTATCATACATTTTGTTTCCATTTTTGGCCTTCCCTTCCATTTTTGTTCCATTCTCTTCCTTCATTGAAACCCTTTTGTTGCATTCAAAAACCTGTTCTTGTTCTTGTTGTTCTTCCCTGGAGGGGTTTTTCTTAAAAGGAAAAGGAAAATGGTGAGAGGAAAAACTCAGATGAGAAGAATAGAAAATGCGACAAGTCGGCAAGTGACATTCTCGAAGCGTCGGAATGGGCTTCTTAAGAAAGCCTTTGAGCTCTCAGTTCTCTGTGATGCTGAACTTGCTCTCATTATTTTCTCTTCCAGAGGCAAACTTTATGAATTTTCAAGCTCAAGGTATGTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATCTGTGTGTGTATATTTTTTCTAAGATAACCACTTTCATCTCATTTTACTCATACGACCAAATTATGATGTGGGTTTTTTTTTTTTTTTTGTTGAGTATAATCGATTAAGAGTATGGAGATCAGTACAAACGTTTACTGTGTAGGCACTTTTATGAAGAAAGCCACAAGGAATTTGGTTCCATATTTAAGGGTTAAACTACACTTATTAAGTATCCATATTTGAGTATTTTCTTTTCACAAATTTTGTTTTAGTTTTCAGATTTTCTTTTGTTAATTAGGAAGAAGAATCAGTTTAAATAAGCTACAAATTTCTGCTACCTTGTAATGAACTGTCACTAAACTGATCATCATCATTAGAATTTTGGAATTAGTTCAAAATCCAATAAATTAACGTTATGATATGATGATGTTTATTTTTTAACATTAGGGTTTTCTTTTATTTGGGTAATAATGTCTAGAAGAATACATATAAAATTATACACAAAAGCAAGCAATATATCCAAAATCCAATGATAATGTTTGGTCTGGTTTTGGTAAGTGCTTTAAAGGACAGTGGTTCAGAAAATTGAAATTTGGTCCAAATTTTTTTAGCCAAATTGGTACAATATTATGCCAATGTACTGAAGATCAAAAAGTCTTCAATTTTCTACACTCTTTCTGTTTAATAACCTATCAATTGATACAGTTTCTTTTGTGACAAAGAGAGAGAGAAAAGAAACAAAAATAGAGATAAGTTTCTGCATAGTTAACTGGAATCCACTTTAAATATCAACTATAATCTTAAGATTATAATACTCTCAATCATGTACTAATTACTTGATTAGTTTAATAAAGTTTGTTCCTATCCTTATTATTAAAAATTAACTCAAAATTTCACATTGATTAGATAGGAAGATTTGAAACATAATCACTGTTTCTATTGGTACAAAGCATTTGGAGTAAAATGGAAAGTAAAGTAATAGAATAATTTGCAAATAATACGAACCATGTGGAGGAGTGGGGTTTATTTTTTTTGTTTTTTGTTTTTTGGTGAACCAATATCTTTTGTGATTTGTACAATTTATTGTTAGTTATTCATATGATCTAATACTAATTTAGTTAACATTCTCTTTTATGATTAATATATTAGGTTTAAAAAATCTAATTAAACACATATAATTAATTATTATGTCAGTTGGTGTCAAGTCACCTTTCAGCTCTCACACACTAATTGGAAATTTGCTGATAATATTTGATTAAAAGTTTTGTTTTTATTTTATAATTTGTGCTAGTTTATGTCATGGGTTTATCCTTATTTTGATTAATCATTACTATTATAATCTATATGTTACTAAAATCAATATATTAATGTGTGTCATACTCATTTTTTCCCTTAAAAAACTATCCATTATAAACTTAGAATTGTGTATTGATTAAAGGTATCAATTTAAAATTTGAATTTTTGTCCAATCTATATCCCTTCCAAATTTGTTTCAAAAACATCGAGTAAAATTCATAATTTGTGTTATTTGAACTCTTAAATTAAATTCAAGTAAATTGCTGATGGATTTAATAAATTTACCAAGACAGAATTAAGAAGAAAAATGTTGATAATTTCTTGATCTTGAATTAAAGTGTGTTACTTCAGTATGCAGGCCACGGTGGGGAGATATCTAAGGCATACAAGATCAGATCAATCCCATCATCTTGATCAACCTTTACCTCATCAACACGATTTACAAGCTGTTCAGGTTTGTTCGGTGTTAGAACGAAATATCGATACCTCAATTTTATAAAAATGCTTACAAAGATATCCATAGATCTCATAGAAAAAAAAACTGCGGATTGTTTTAGTTACAAACTGCATAAAGATATATATAAGTTTAGTGATAATTATGATTAAGACTATGATGGATATCGATTGGTTAAAGTATCATTTTGATCTTTATATATCTTTACGTTTCGAATGATTTTCAGACTAAGTTTTATATGTTTTTAAAGTTTATGAATACCGAAATCTAGTTTTAAGATTTATTCGAAAGGAACCAAATAAAATGAAACAAATTTATTTATGAAAAATGATATTTTAACCTAATTTGTATCACATTCATACGTACTATTATTATTATTTGTTTTTCTTTCAATAACTAATTGGTTTGGTCTTGTATACATATATGTACACGCCTTTGTCTATGCTTTGATTGTGAGTAAATGAAGAATGAAGCTGCAAGTTTGTTGAAGGAGATAGAGTCAGTTGAAGTTTCAAAGAGGTAGAATTATAAGATATATATATCCCTAATTGTTTTGGTTTTTAATTAAACACTTAAAAAGTACTTATTTTTAAACCGTTGTGTTGAAAGTTTAGAATATTTGTTTGTTCTGATATGATGTGAAATTTTGGATTTTGTTGTATAAAGCAGGAAATTGCTGGGTGAAAGTCTAGGAACAAGCTCATATGAAGAACTCCAACAATTAGAACAACAACTAGAAAGAAGCTTATCCCATATTAGAGCTAGAAAGGTAATGAAAAAGACTCATCAACTACAACTCTTTTACACACACACATATATGATAATCACACATTCATAGTTCAACTTTGCCATTGTCATATAATTTTGGATATTATACTGATTTTAACTTTAAATTCTAATGTATCTCTAAACTGTAGTTTTGAAATGTTTATGGAAGTTGAGGAGTAATAACGTCACTTTAATATGAATTTCATCCTTTCCAAATATCTCATTTTATCAAAATAATATTTCATAAAATCTTTGGCTCATGAGTTATATTCTGTGAACTTAGGATACTGCATTAGCCCATGTTGTTTAATGTCAACTATATTATAAAAAAATATATTTATTCAAGATTGATGATGTTAATATTATATTAAAAATCCAACAAGTTTTGTTTTGATATTTTGAATCGAGGAAGAAGAAGATGACATGAACTGATGTGTTTTCATGTTTCTGATTTTCAGCATGAGGTTTACAGGGAACAGATAGAACAACTAAAAGAAAAGGTTAGAAATTTCTTTTCAAAATAAATAAAAGCTTCAAAAACTTTATATTTAATTTCCTATGTGATTTTATGAATATTTTCTAGCCATGAATGCTCTTTTTTCTTGCCCCTATAATTTCTTTTTCTTCTGTTCTTCATTTGGAAAAAAAAAACAAAAAAAAAAAACTAAACAGGAGAAGCATTTGACAGCTGAAAATGCAAAGCTAGCTAAGAAGGTGAGGATAATCGATATACGATCGCTTTTCGACTATTTTCAAATATAGCAATGTGAATCAAAATATTTATAAAAGATAGTAAAATATCATTTAGTTTATGTATAATAGACCACAATAATAATCCATGTTAGTTAATTTATACTTATGGACCGATTATGAAATTTAATGTATTTATAAATCTTTTCATATAAAATAAATTTTCCTCACATTTCCTTAATCACGGTTTTCTCAAGAACCAAAAAAAAAAAAAAATCTAATTAATAGGTTAAATTACAAGGTTAGTCGATGAAGTTTACTACGGTATCTATTTGATTATTTTGTAATTGTTTTACACTTCTCTAAAATCAATAGCTTATAGGGTATAGAAAAGTATGATATTAAGAGTAAAACTCAGCTAAAATAGAATATTACTCTCTAACCTTACATGTTGTCGAACTATATTACAAATTTTCAATACATATGCAGCTTTACACTCGTTGTATCCTTAAATTTATTCCTTGTTATCAATTATTTTTACCGTTTTTAAAGAACCAAGTCCTTCACTTAAATACTAAAATGATTGCCATTACATTAAATTTACTCACCCCATAAGCTTAATTTTTGTTTGGGTGAATGGGTGATTTTAGGGTTTAGAAGTGTTTTTGTTTTCTTTTTTTTATATAAACATGTGTTGGATGTATAATTAGGAGTTTAGGGTTTGATTAGACATGGAAGTTGGATCAGTTTGTGTAACAAAACGTTGTTATAAATTTGTGATATTTTGCAGTACGACGTTGAAGAGGAGCGTCAACAATCTCCAACTCAAATACAGTTAGCAGAAGTTTCACCTAACTATGGAGAAAGTAGTTCCATTTCAGACGTTGAAACGGATTTGTTCATTGGACCTCCCAAGTCCAGATCCAAGTGACTTTATTTTCATCTTCGTTTTATAGTAATCAACGACTTAATTAACCTTCTTTTTCTTTTAAATTAATTAATTATATTAAATTGTATCATAATAATTATCTTAATTATATAAATTTCCAAACTGATTTTTCTATTTTTTTTTCTTTTTATTTG

mRNA sequence

ATGGTGAGAGGAAAAACTCAGATGAGAAGAATAGAAAATGCGACAAGTCGGCAAGTGACATTCTCGAAGCGTCGGAATGGGCTTCTTAAGAAAGCCTTTGAGCTCTCAGTTCTCTGTGATGCTGAACTTGCTCTCATTATTTTCTCTTCCAGAGGCAAACTTTATGAATTTTCAAGCTCAAGTATGCAGGCCACGGTGGGGAGATATCTAAGGCATACAAGATCAGATCAATCCCATCATCTTGATCAACCTTTACCTCATCAACACGATTTACAAGCTGTTCAGAATGAAGCTGCAAGTTTGTTGAAGGAGATAGAGTCAGTTGAAGTTTCAAAGAGGAAATTGCTGGGTGAAAGTCTAGGAACAAGCTCATATGAAGAACTCCAACAATTAGAACAACAACTAGAAAGAAGCTTATCCCATATTAGAGCTAGAAAGCATGAGGTTTACAGGGAACAGATAGAACAACTAAAAGAAAAGGAGAAGCATTTGACAGCTGAAAATGCAAAGCTAGCTAAGAAGTACGACGTTGAAGAGGAGCGTCAACAATCTCCAACTCAAATACAGTTAGCAGAAGTTTCACCTAACTATGGAGAAAGTAGTTCCATTTCAGACGTTGAAACGGATTTGTTCATTGGACCTCCCAAGTCCAGATCCAAGTGA

Coding sequence (CDS)

ATGGTGAGAGGAAAAACTCAGATGAGAAGAATAGAAAATGCGACAAGTCGGCAAGTGACATTCTCGAAGCGTCGGAATGGGCTTCTTAAGAAAGCCTTTGAGCTCTCAGTTCTCTGTGATGCTGAACTTGCTCTCATTATTTTCTCTTCCAGAGGCAAACTTTATGAATTTTCAAGCTCAAGTATGCAGGCCACGGTGGGGAGATATCTAAGGCATACAAGATCAGATCAATCCCATCATCTTGATCAACCTTTACCTCATCAACACGATTTACAAGCTGTTCAGAATGAAGCTGCAAGTTTGTTGAAGGAGATAGAGTCAGTTGAAGTTTCAAAGAGGAAATTGCTGGGTGAAAGTCTAGGAACAAGCTCATATGAAGAACTCCAACAATTAGAACAACAACTAGAAAGAAGCTTATCCCATATTAGAGCTAGAAAGCATGAGGTTTACAGGGAACAGATAGAACAACTAAAAGAAAAGGAGAAGCATTTGACAGCTGAAAATGCAAAGCTAGCTAAGAAGTACGACGTTGAAGAGGAGCGTCAACAATCTCCAACTCAAATACAGTTAGCAGAAGTTTCACCTAACTATGGAGAAAGTAGTTCCATTTCAGACGTTGAAACGGATTTGTTCATTGGACCTCCCAAGTCCAGATCCAAGTGA

Protein sequence

MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAELALIIFSSRGKLYEFSSSSMQATVGRYLRHTRSDQSHHLDQPLPHQHDLQAVQNEAASLLKEIESVEVSKRKLLGESLGTSSYEELQQLEQQLERSLSHIRARKHEVYREQIEQLKEKEKHLTAENAKLAKKYDVEEERQQSPTQIQLAEVSPNYGESSSISDVETDLFIGPPKSRSK*
Homology
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BLAST of CsaV3_3G009400 vs. NCBI nr
Match: XP_004133895.1 (MADS-box protein SOC1 isoform X1 [Cucumis sativus] >KGN56596.2 hypothetical protein Csa_010330 [Cucumis sativus])

HSP 1 Score: 406.0 bits (1042), Expect = 2.1e-109
Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0 

Query: 1   MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAELALIIFSSRGKLYEFSSS 60
           MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAELALIIFSSRGKLYEFSSS
Sbjct: 1   MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAELALIIFSSRGKLYEFSSS 60

Query: 61  SMQATVGRYLRHTRSDQSHHLDQPLPHQHDLQAVQNEAASLLKEIESVEVSKRKLLGESL 120
           SMQATVGRYLRHTRSDQSHHLDQPLPHQHDLQAVQNEAASLLKEIESVEVSKRKLLGESL
Sbjct: 61  SMQATVGRYLRHTRSDQSHHLDQPLPHQHDLQAVQNEAASLLKEIESVEVSKRKLLGESL 120

Query: 121 GTSSYEELQQLEQQLERSLSHIRARKHEVYREQIEQLKEKEKHLTAENAKLAKKYDVEEE 180
           GTSSYEELQQLEQQLERSLSHIRARKHEVYREQIEQLKEKEKHLTAENAKLAKKYDVEEE
Sbjct: 121 GTSSYEELQQLEQQLERSLSHIRARKHEVYREQIEQLKEKEKHLTAENAKLAKKYDVEEE 180

Query: 181 RQQSPTQIQLAEVSPNYGESSSISDVETDLFIGPPKSRSK 221
           RQQSPTQIQLAEVSPNYGESSSISDVETDLFIGPPKSRSK
Sbjct: 181 RQQSPTQIQLAEVSPNYGESSSISDVETDLFIGPPKSRSK 220

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BLAST of CsaV3_3G009400 vs. NCBI nr
Match: XP_031737728.1 (MADS-box protein SOC1 isoform X2 [Cucumis sativus])

HSP 1 Score: 371.7 bits (953), Expect = 4.4e-99
Identity = 206/220 (93.64%), Postives = 206/220 (93.64%), Query Frame = 0 

Query: 1   MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAELALIIFSSRGKLYEFSSS 60
           MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAELALIIFSSRGKLYEFSSS
Sbjct: 1   MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAELALIIFSSRGKLYEFSSS 60

Query: 61  SMQATVGRYLRHTRSDQSHHLDQPLPHQHDLQAVQNEAASLLKEIESVEVSKRKLLGESL 120
           SMQATVGRYLRHTRSDQSHHLDQPLPHQHDLQAVQNEAASLLKEIESVEVSKRKLLGESL
Sbjct: 61  SMQATVGRYLRHTRSDQSHHLDQPLPHQHDLQAVQNEAASLLKEIESVEVSKRKLLGESL 120

Query: 121 GTSSYEELQQLEQQLERSLSHIRARKHEVYREQIEQLKEKEKHLTAENAKLAKKYDVEEE 180
           GTSSYEELQQLEQQLERSLSHIRARKHEVYREQIEQLKE              KYDVEEE
Sbjct: 121 GTSSYEELQQLEQQLERSLSHIRARKHEVYREQIEQLKE--------------KYDVEEE 180

Query: 181 RQQSPTQIQLAEVSPNYGESSSISDVETDLFIGPPKSRSK 221
           RQQSPTQIQLAEVSPNYGESSSISDVETDLFIGPPKSRSK
Sbjct: 181 RQQSPTQIQLAEVSPNYGESSSISDVETDLFIGPPKSRSK 206

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BLAST of CsaV3_3G009400 vs. NCBI nr
Match: XP_008438118.1 (PREDICTED: MADS-box protein SOC1-like isoform X1 [Cucumis melo] >XP_016898941.1 PREDICTED: MADS-box protein SOC1-like isoform X1 [Cucumis melo])

HSP 1 Score: 360.1 bits (923), Expect = 1.3e-95
Identity = 202/221 (91.40%), Postives = 209/221 (94.57%), Query Frame = 0 

Query: 1   MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAELALIIFSSRGKLYEFSSS 60
           MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAE+ALIIFSSRGKLYEFSSS
Sbjct: 1   MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEIALIIFSSRGKLYEFSSS 60

Query: 61  SMQATVGRYLRHTRSDQSHHLDQPLPHQHDLQAVQNEAASLLKEIESVEVSKRKLLGESL 120
           SMQATV RYLRHTRS+QSHHLDQ   HQ DLQ+VQ+EAASLLKEIESVEV+KRKLLGE L
Sbjct: 61  SMQATVERYLRHTRSNQSHHLDQLSAHQPDLQSVQSEAASLLKEIESVEVAKRKLLGEGL 120

Query: 121 GTSSYEELQQLEQQLERSLSHIRARKHEVYREQIEQLKEKEKHLTAENAKLAKKYDVEEE 180
           G SSYEELQQLEQQLERSLSHIRARK+EVYREQIEQLKEKEKHL AENAKLAKKY VEEE
Sbjct: 121 GKSSYEELQQLEQQLERSLSHIRARKNEVYREQIEQLKEKEKHLIAENAKLAKKYFVEEE 180

Query: 181 RQQSPT-QIQLAEVSPNYGESSSISDVETDLFIGPPKSRSK 221
            QQSPT QIQ+AEVSPNY ESSSISDVETDLFIGPPKSRSK
Sbjct: 181 PQQSPTDQIQIAEVSPNYAESSSISDVETDLFIGPPKSRSK 221

[Close]
BLAST of CsaV3_3G009400 vs. NCBI nr
Match: XP_008438119.1 (PREDICTED: MADS-box protein SOC1-like isoform X2 [Cucumis melo])

HSP 1 Score: 328.6 bits (841), Expect = 4.3e-86
Identity = 189/221 (85.52%), Postives = 195/221 (88.24%), Query Frame = 0 

Query: 1   MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAELALIIFSSRGKLYEFSSS 60
           MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAE+ALIIFSSRGKLYEFSSS
Sbjct: 1   MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEIALIIFSSRGKLYEFSSS 60

Query: 61  SMQATVGRYLRHTRSDQSHHLDQPLPHQHDLQAVQNEAASLLKEIESVEVSKRKLLGESL 120
           SMQATV RYLRHTRS+QSHHLDQ   HQ DLQ+VQ+EAASLLKEIESVEV+KRKLLGE L
Sbjct: 61  SMQATVERYLRHTRSNQSHHLDQLSAHQPDLQSVQSEAASLLKEIESVEVAKRKLLGEGL 120

Query: 121 GTSSYEELQQLEQQLERSLSHIRARKHEVYREQIEQLKEKEKHLTAENAKLAKKYDVEEE 180
           G SSYEELQQLEQQLERSLSHIRAR              KEKHL AENAKLAKKY VEEE
Sbjct: 121 GKSSYEELQQLEQQLERSLSHIRAR--------------KEKHLIAENAKLAKKYFVEEE 180

Query: 181 RQQSPT-QIQLAEVSPNYGESSSISDVETDLFIGPPKSRSK 221
            QQSPT QIQ+AEVSPNY ESSSISDVETDLFIGPPKSRSK
Sbjct: 181 PQQSPTDQIQIAEVSPNYAESSSISDVETDLFIGPPKSRSK 207

[Close]
BLAST of CsaV3_3G009400 vs. NCBI nr
Match: XP_038902636.1 (MADS-box protein SOC1-like [Benincasa hispida] >XP_038902644.1 MADS-box protein SOC1-like [Benincasa hispida])

HSP 1 Score: 323.9 bits (829), Expect = 1.0e-84
Identity = 190/221 (85.97%), Postives = 205/221 (92.76%), Query Frame = 0 

Query: 1   MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAELALIIFSSRGKLYEFSSS 60
           MVRGKTQMRRIENATSRQVTFSKRRNGLLKKA ELSVLCDAELALIIFSSRGKLYEFSSS
Sbjct: 1   MVRGKTQMRRIENATSRQVTFSKRRNGLLKKALELSVLCDAELALIIFSSRGKLYEFSSS 60

Query: 61  SMQATVGRYLRHTRSDQSHHLDQPLPHQH-DLQAVQNEAASLLKEIESVEVSKRKLLGES 120
           S+QATVGRYLRHTRS ++HHL +PL H H DLQ VQNEAASLLKEIES+EVSKRKLLGE 
Sbjct: 61  SVQATVGRYLRHTRS-ETHHL-EPLAHHHDDLQVVQNEAASLLKEIESLEVSKRKLLGED 120

Query: 121 LGTSSYEELQQLEQQLERSLSHIRARKHEVYREQIEQLKEKEKHLTAENAKLAKKYDVEE 180
           LG+SS++ELQQ+EQQLERSLSH+RARK+E+Y+EQIEQLK KEK+L  ENAKLAKKY VE+
Sbjct: 121 LGSSSFDELQQIEQQLERSLSHVRARKNELYKEQIEQLKRKEKNLADENAKLAKKYCVEQ 180

Query: 181 ERQQSPTQIQLAEVSPNYGESSSISDVETDLFIGPP-KSRS 220
           ERQQSPTQ QLAEVSP Y ESSSISDVETDLFIGPP KSRS
Sbjct: 181 ERQQSPTQ-QLAEVSP-YPESSSISDVETDLFIGPPNKSRS 217

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BLAST of CsaV3_3G009400 vs. ExPASy Swiss-Prot
Match: O64645 (MADS-box protein SOC1 OS=Arabidopsis thaliana OX=3702 GN=SOC1 PE=1 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 2.1e-56
Identity = 134/220 (60.91%), Postives = 167/220 (75.91%), Query Frame = 0 

Query: 1   MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAELALIIFSSRGKLYEFSSS 60
           MVRGKTQM+RIENATSRQVTFSKRRNGLLKKAFELSVLCDAE++LIIFS +GKLYEF+SS
Sbjct: 1   MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVSLIIFSPKGKLYEFASS 60

Query: 61  SMQATVGRYLRHTRSDQSHHLDQPLPHQHDLQAVQNEAASLLKEIESVEVSKRKLLGESL 120
           +MQ T+ RYLRHT+   S    +P+  + ++Q ++ EAA+++K+IE +E SKRKLLGE +
Sbjct: 61  NMQDTIDRYLRHTKDRVS---TKPV-SEENMQHLKYEAANMMKKIEQLEASKRKLLGEGI 120

Query: 121 GTSSYEELQQLEQQLERSLSHIRARKHEVYREQIEQLKEKEKHLTAENAKLAKKYDVEEE 180
           GT S EELQQ+EQQLE+S+  IRARK +V++EQIEQLK+KEK L AEN KL++K+   E 
Sbjct: 121 GTCSIEELQQIEQQLEKSVKCIRARKTQVFKEQIEQLKQKEKALAAENEKLSEKWGSHES 180

Query: 181 RQQSPTQIQLAEVSPNYGESSSISDVETDLFIGPPKSRSK 221
              S    +         ESS  S+VET LFIG P S  K
Sbjct: 181 EVWSNKNQE--STGRGDEESSPSSEVETQLFIGLPCSSRK 214

[Close]
BLAST of CsaV3_3G009400 vs. ExPASy Swiss-Prot
Match: O82743 (Agamous-like MADS-box protein AGL19 OS=Arabidopsis thaliana OX=3702 GN=AGL19 PE=1 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 3.3e-49
Identity = 119/218 (54.59%), Postives = 156/218 (71.56%), Query Frame = 0 

Query: 1   MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAELALIIFSSRGKLYEFSSS 60
           MVRGKT+M+RIENATSRQVTFSKRRNGLLKKAFELSVLCDAE+AL+IFS R KLYEFSSS
Sbjct: 1   MVRGKTEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALVIFSPRSKLYEFSSS 60

Query: 61  SMQATVGRYLRHTRSDQSHHLDQPLPHQHDLQAVQNEAASLLKEIESVEVSKRKLLGESL 120
           S+ AT+ RY R  +   ++H         + Q  ++E + L K+IE +E+SKRKLLGE +
Sbjct: 61  SIAATIERYQRRIKEIGNNH-----KRNDNSQQARDETSGLTKKIEQLEISKRKLLGEGI 120

Query: 121 GTSSYEELQQLEQQLERSLSHIRARKHEVYREQIEQLKEKEKHLTAENAKLAKKYDVEEE 180
              S EELQQLE QL+RSLS IRA+K+++ RE+IE+LK +E++L  EN  L +K+     
Sbjct: 121 DACSIEELQQLENQLDRSLSRIRAKKYQLLREEIEKLKAEERNLVKENKDLKEKWLGMGT 180

Query: 181 RQQSPTQIQLAEVSPNYGESSSISDVETDLFIGPPKSR 219
              + +Q  L+    N  ++    +VET LFIGPP++R
Sbjct: 181 ATIASSQSTLSSSEVNIDDN---MEVETGLFIGPPETR 210

[Close]
BLAST of CsaV3_3G009400 vs. ExPASy Swiss-Prot
Match: Q38838 (Agamous-like MADS-box protein AGL14 OS=Arabidopsis thaliana OX=3702 GN=AGL14 PE=1 SV=2)

HSP 1 Score: 188.0 bits (476), Expect = 1.2e-46
Identity = 121/223 (54.26%), Postives = 155/223 (69.51%), Query Frame = 0 

Query: 1   MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAELALIIFSSRGKLYEF-SS 60
           MVRGKT+M+RIENATSRQVTFSKRRNGLLKKAFELSVLCDAE+ALIIFS RGKLYEF SS
Sbjct: 1   MVRGKTEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSS 60

Query: 61  SSMQATVGRYLRHTRSDQSHHLDQPLPHQHDLQAVQNEAASLLKEIESVEVSKRKLLGES 120
           SS+  TV RY +  +   S+H         + Q  ++E   L ++IE +E+S RK++GE 
Sbjct: 61  SSIPKTVERYQKRIQDLGSNH-----KRNDNSQQSKDETYGLARKIEHLEISTRKMMGEG 120

Query: 121 LGTSSYEELQQLEQQLERSLSHIRARKHEVYREQIEQLKEKEKHLTAENAKLAKKYDVEE 180
           L  SS EELQQLE QL+RSL  IRA+K+++ RE+ E+LKEKE++L AEN  L +K +++ 
Sbjct: 121 LDASSIEELQQLENQLDRSLMKIRAKKYQLLREETEKLKEKERNLIAENKMLMEKCEMQG 180

Query: 181 E----RQQSPTQIQLAEVSPNYGESSSISDVETDLFIGPPKSR 219
                R  S +     ++  N  E      V TDLFIGPP++R
Sbjct: 181 RGIIGRISSSSSTSELDIDDNEME------VVTDLFIGPPETR 212

[Close]
BLAST of CsaV3_3G009400 vs. ExPASy Swiss-Prot
Match: Q9FIS1 (MADS-box protein AGL42 OS=Arabidopsis thaliana OX=3702 GN=AGL42 PE=1 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 2.0e-46
Identity = 113/215 (52.56%), Postives = 151/215 (70.23%), Query Frame = 0 

Query: 1   MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAELALIIFSSRGKLYEFSSS 60
           MVRGK +M++IENATSRQVTFSKRRNGLLKKA+ELSVLCDA+L+LIIFS RG+LYEFSSS
Sbjct: 1   MVRGKIEMKKIENATSRQVTFSKRRNGLLKKAYELSVLCDAQLSLIIFSQRGRLYEFSSS 60

Query: 61  SMQATVGRYLRHTRSDQSHHLDQPLPHQHDLQAVQNEAASLLKEIESVEVSKRKLLGESL 120
            MQ T+ RY ++T+  ++ + D     Q  LQ ++ EA+ ++ +IE +E  KRKLLG+ +
Sbjct: 61  DMQKTIERYRKYTKDHETSNHDS----QIHLQQLKQEASHMITKIELLEFHKRKLLGQGI 120

Query: 121 GTSSYEELQQLEQQLERSLSHIRARKHEVYREQIEQLKEKEKHLTAENAKLAKKYDVEEE 180
            + S EELQ+++ QL+RSL  +R RK ++++EQ+E+LK KEK L  EN KL +K  +   
Sbjct: 121 ASCSLEELQEIDSQLQRSLGKVRERKAQLFKEQLEKLKAKEKQLLEENVKLHQKNVINPW 180

Query: 181 RQQSPTQIQLAEVSPNYGESSSISDVETDLFIGPP 216
           R  S  Q Q       Y       +VETDLFIG P
Sbjct: 181 RGSSTDQQQ-----EKYKVIDLNLEVETDLFIGLP 206

[Close]
BLAST of CsaV3_3G009400 vs. ExPASy Swiss-Prot
Match: Q9XJ60 (MADS-box transcription factor 50 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS50 PE=2 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 5.5e-44
Identity = 115/222 (51.80%), Postives = 152/222 (68.47%), Query Frame = 0 

Query: 1   MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAELALIIFSSRGKLYEFSSS 60
           MVRGKTQM+RIEN TSRQVTFSKRRNGLLKKAFELSVLCDAE+ALI+FS RGKLYEF+S+
Sbjct: 1   MVRGKTQMKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFASA 60

Query: 61  SMQATVGRYLRHTRSDQSHHLDQPLPHQHDLQAVQNEAASLLKEIESVEVSKRKLLGESL 120
           S Q T+ RY  +T+ +  +        Q D++ V+ +A  L K++E++E  KRKLLGE L
Sbjct: 61  STQKTIERYRTYTKENIGNK-----TVQQDIEQVKADADGLAKKLEALETYKRKLLGEKL 120

Query: 121 GTSSYEELQQLEQQLERSLSHIRARKHEVYREQIEQLKEKEKHLTAENAKLAKKYDVEEE 180
              S EEL  LE +LERSL  IR RK ++  EQ+ +L+EKE  L  +N +L +K    + 
Sbjct: 121 DECSIEELHSLEVKLERSLISIRGRKTKLLEEQVAKLREKEMKLRKDNEELREKCK-NQP 180

Query: 181 RQQSPTQIQLAEVSP--NYGESSSISDVETDLFIG-PPKSRS 220
              +P  ++  + +P  N   ++   DVET+LFIG P +SRS
Sbjct: 181 PLSAPLTVRAEDENPDRNINTTNDNMDVETELFIGLPGRSRS 216

[Close]
BLAST of CsaV3_3G009400 vs. ExPASy TrEMBL
Match: A0A1S4DSH6 (MADS-box protein SOC1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483321 PE=4 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 6.4e-96
Identity = 202/221 (91.40%), Postives = 209/221 (94.57%), Query Frame = 0 

Query: 1   MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAELALIIFSSRGKLYEFSSS 60
           MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAE+ALIIFSSRGKLYEFSSS
Sbjct: 1   MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEIALIIFSSRGKLYEFSSS 60

Query: 61  SMQATVGRYLRHTRSDQSHHLDQPLPHQHDLQAVQNEAASLLKEIESVEVSKRKLLGESL 120
           SMQATV RYLRHTRS+QSHHLDQ   HQ DLQ+VQ+EAASLLKEIESVEV+KRKLLGE L
Sbjct: 61  SMQATVERYLRHTRSNQSHHLDQLSAHQPDLQSVQSEAASLLKEIESVEVAKRKLLGEGL 120

Query: 121 GTSSYEELQQLEQQLERSLSHIRARKHEVYREQIEQLKEKEKHLTAENAKLAKKYDVEEE 180
           G SSYEELQQLEQQLERSLSHIRARK+EVYREQIEQLKEKEKHL AENAKLAKKY VEEE
Sbjct: 121 GKSSYEELQQLEQQLERSLSHIRARKNEVYREQIEQLKEKEKHLIAENAKLAKKYFVEEE 180

Query: 181 RQQSPT-QIQLAEVSPNYGESSSISDVETDLFIGPPKSRSK 221
            QQSPT QIQ+AEVSPNY ESSSISDVETDLFIGPPKSRSK
Sbjct: 181 PQQSPTDQIQIAEVSPNYAESSSISDVETDLFIGPPKSRSK 221

[Close]
BLAST of CsaV3_3G009400 vs. ExPASy TrEMBL
Match: A0A1S3AVA0 (MADS-box protein SOC1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483321 PE=4 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 2.1e-86
Identity = 189/221 (85.52%), Postives = 195/221 (88.24%), Query Frame = 0 

Query: 1   MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAELALIIFSSRGKLYEFSSS 60
           MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAE+ALIIFSSRGKLYEFSSS
Sbjct: 1   MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEIALIIFSSRGKLYEFSSS 60

Query: 61  SMQATVGRYLRHTRSDQSHHLDQPLPHQHDLQAVQNEAASLLKEIESVEVSKRKLLGESL 120
           SMQATV RYLRHTRS+QSHHLDQ   HQ DLQ+VQ+EAASLLKEIESVEV+KRKLLGE L
Sbjct: 61  SMQATVERYLRHTRSNQSHHLDQLSAHQPDLQSVQSEAASLLKEIESVEVAKRKLLGEGL 120

Query: 121 GTSSYEELQQLEQQLERSLSHIRARKHEVYREQIEQLKEKEKHLTAENAKLAKKYDVEEE 180
           G SSYEELQQLEQQLERSLSHIRAR              KEKHL AENAKLAKKY VEEE
Sbjct: 121 GKSSYEELQQLEQQLERSLSHIRAR--------------KEKHLIAENAKLAKKYFVEEE 180

Query: 181 RQQSPT-QIQLAEVSPNYGESSSISDVETDLFIGPPKSRSK 221
            QQSPT QIQ+AEVSPNY ESSSISDVETDLFIGPPKSRSK
Sbjct: 181 PQQSPTDQIQIAEVSPNYAESSSISDVETDLFIGPPKSRSK 207

[Close]
BLAST of CsaV3_3G009400 vs. ExPASy TrEMBL
Match: A0A1S3AVP8 (MADS-box protein SOC1-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103483321 PE=4 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 3.5e-78
Identity = 176/221 (79.64%), Postives = 182/221 (82.35%), Query Frame = 0 

Query: 1   MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAELALIIFSSRGKLYEFSSS 60
           MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAE+ALIIFSSRGKLYEFSSS
Sbjct: 1   MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEIALIIFSSRGKLYEFSSS 60

Query: 61  SMQATVGRYLRHTRSDQSHHLDQPLPHQHDLQAVQNEAASLLKEIESVEVSKRKLLGESL 120
           SMQATV RYLRHTRS+QSHHLDQ   HQ DLQ+VQ+EAASLLKEIESVEV+KRKLLGE L
Sbjct: 61  SMQATVERYLRHTRSNQSHHLDQLSAHQPDLQSVQSEAASLLKEIESVEVAKRKLLGEGL 120

Query: 121 GTSSYEELQQLEQQLERSLSHIRARKHEVYREQIEQLKEKEKHLTAENAKLAKKYDVEEE 180
           G SSYEELQQLEQQLERSLSHIRAR                            KY VEEE
Sbjct: 121 GKSSYEELQQLEQQLERSLSHIRAR----------------------------KYFVEEE 180

Query: 181 RQQSPT-QIQLAEVSPNYGESSSISDVETDLFIGPPKSRSK 221
            QQSPT QIQ+AEVSPNY ESSSISDVETDLFIGPPKSRSK
Sbjct: 181 PQQSPTDQIQIAEVSPNYAESSSISDVETDLFIGPPKSRSK 193

[Close]
BLAST of CsaV3_3G009400 vs. ExPASy TrEMBL
Match: A0A0A0L4C0 (K-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G124870 PE=4 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 1.5e-76
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0 

Query: 62  MQATVGRYLRHTRSDQSHHLDQPLPHQHDLQAVQNEAASLLKEIESVEVSKRKLLGESLG 121
           MQATVGRYLRHTRSDQSHHLDQPLPHQHDLQAVQNEAASLLKEIESVEVSKRKLLGESLG
Sbjct: 1   MQATVGRYLRHTRSDQSHHLDQPLPHQHDLQAVQNEAASLLKEIESVEVSKRKLLGESLG 60

Query: 122 TSSYEELQQLEQQLERSLSHIRARKHEVYREQIEQLKEKEKHLTAENAKLAKKYDVEEER 181
           TSSYEELQQLEQQLERSLSHIRARKHEVYREQIEQLKEKEKHLTAENAKLAKKYDVEEER
Sbjct: 61  TSSYEELQQLEQQLERSLSHIRARKHEVYREQIEQLKEKEKHLTAENAKLAKKYDVEEER 120

Query: 182 QQSPTQIQLAEVSPNYGESSSISDVETDLFIGPPKSRSK 221
           QQSPTQIQLAEVSPNYGESSSISDVETDLFIGPPKSRSK
Sbjct: 121 QQSPTQIQLAEVSPNYGESSSISDVETDLFIGPPKSRSK 159

[Close]
BLAST of CsaV3_3G009400 vs. ExPASy TrEMBL
Match: A0A6J1D177 (MADS-box protein SOC1-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111016338 PE=4 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 1.5e-76
Identity = 171/219 (78.08%), Postives = 194/219 (88.58%), Query Frame = 0 

Query: 1   MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAELALIIFSSRGKLYEFSSS 60
           MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAE+ALII+SSRGKLYEF+SS
Sbjct: 1   MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIYSSRGKLYEFASS 60

Query: 61  SMQATVGRYLRHTRSDQSHHLDQPLPHQHDLQAVQNEAASLLKEIESVEVSKRKLLGESL 120
           SMQATVGRYLRHT+  ++HHL QPL  QH LQ VQ+EAA+L+KEIES+EVSKRKLLGE L
Sbjct: 61  SMQATVGRYLRHTK--ETHHL-QPLVRQHTLQTVQHEAATLVKEIESLEVSKRKLLGEGL 120

Query: 121 GTSSYEELQQLEQQLERSLSHIRARKHEVYREQIEQLKEKEKHLTAENAKLAKKYDVEEE 180
           G+SS EEL Q+EQQLERSL+++RARKH+VYREQIEQL EKEK L AENAKL +KY V+  
Sbjct: 121 GSSSCEELHQIEQQLERSLTNVRARKHQVYREQIEQLGEKEKFLAAENAKLGEKYCVQLH 180

Query: 181 RQQSPTQIQLAEVSPNYGESSSISDVETDLFIGPPKSRS 220
            +QSP   +  EVSP + ESSSISDVET+LFIGPP+SRS
Sbjct: 181 HRQSPN--EQGEVSP-HPESSSISDVETELFIGPPESRS 213

[Close]
BLAST of CsaV3_3G009400 vs. TAIR 10
Match: AT2G45660.1 (AGAMOUS-like 20 )

HSP 1 Score: 220.3 bits (560), Expect = 1.5e-57
Identity = 134/220 (60.91%), Postives = 167/220 (75.91%), Query Frame = 0 

Query: 1   MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAELALIIFSSRGKLYEFSSS 60
           MVRGKTQM+RIENATSRQVTFSKRRNGLLKKAFELSVLCDAE++LIIFS +GKLYEF+SS
Sbjct: 1   MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVSLIIFSPKGKLYEFASS 60

Query: 61  SMQATVGRYLRHTRSDQSHHLDQPLPHQHDLQAVQNEAASLLKEIESVEVSKRKLLGESL 120
           +MQ T+ RYLRHT+   S    +P+  + ++Q ++ EAA+++K+IE +E SKRKLLGE +
Sbjct: 61  NMQDTIDRYLRHTKDRVS---TKPV-SEENMQHLKYEAANMMKKIEQLEASKRKLLGEGI 120

Query: 121 GTSSYEELQQLEQQLERSLSHIRARKHEVYREQIEQLKEKEKHLTAENAKLAKKYDVEEE 180
           GT S EELQQ+EQQLE+S+  IRARK +V++EQIEQLK+KEK L AEN KL++K+   E 
Sbjct: 121 GTCSIEELQQIEQQLEKSVKCIRARKTQVFKEQIEQLKQKEKALAAENEKLSEKWGSHES 180

Query: 181 RQQSPTQIQLAEVSPNYGESSSISDVETDLFIGPPKSRSK 221
              S    +         ESS  S+VET LFIG P S  K
Sbjct: 181 EVWSNKNQE--STGRGDEESSPSSEVETQLFIGLPCSSRK 214

[Close]
BLAST of CsaV3_3G009400 vs. TAIR 10
Match: AT4G22950.1 (AGAMOUS-like 19 )

HSP 1 Score: 196.4 bits (498), Expect = 2.4e-50
Identity = 119/218 (54.59%), Postives = 156/218 (71.56%), Query Frame = 0 

Query: 1   MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAELALIIFSSRGKLYEFSSS 60
           MVRGKT+M+RIENATSRQVTFSKRRNGLLKKAFELSVLCDAE+AL+IFS R KLYEFSSS
Sbjct: 1   MVRGKTEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALVIFSPRSKLYEFSSS 60

Query: 61  SMQATVGRYLRHTRSDQSHHLDQPLPHQHDLQAVQNEAASLLKEIESVEVSKRKLLGESL 120
           S+ AT+ RY R  +   ++H         + Q  ++E + L K+IE +E+SKRKLLGE +
Sbjct: 61  SIAATIERYQRRIKEIGNNH-----KRNDNSQQARDETSGLTKKIEQLEISKRKLLGEGI 120

Query: 121 GTSSYEELQQLEQQLERSLSHIRARKHEVYREQIEQLKEKEKHLTAENAKLAKKYDVEEE 180
              S EELQQLE QL+RSLS IRA+K+++ RE+IE+LK +E++L  EN  L +K+     
Sbjct: 121 DACSIEELQQLENQLDRSLSRIRAKKYQLLREEIEKLKAEERNLVKENKDLKEKWLGMGT 180

Query: 181 RQQSPTQIQLAEVSPNYGESSSISDVETDLFIGPPKSR 219
              + +Q  L+    N  ++    +VET LFIGPP++R
Sbjct: 181 ATIASSQSTLSSSEVNIDDN---MEVETGLFIGPPETR 210

[Close]
BLAST of CsaV3_3G009400 vs. TAIR 10
Match: AT4G11880.1 (AGAMOUS-like 14 )

HSP 1 Score: 188.0 bits (476), Expect = 8.4e-48
Identity = 121/223 (54.26%), Postives = 155/223 (69.51%), Query Frame = 0 

Query: 1   MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAELALIIFSSRGKLYEF-SS 60
           MVRGKT+M+RIENATSRQVTFSKRRNGLLKKAFELSVLCDAE+ALIIFS RGKLYEF SS
Sbjct: 1   MVRGKTEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSS 60

Query: 61  SSMQATVGRYLRHTRSDQSHHLDQPLPHQHDLQAVQNEAASLLKEIESVEVSKRKLLGES 120
           SS+  TV RY +  +   S+H         + Q  ++E   L ++IE +E+S RK++GE 
Sbjct: 61  SSIPKTVERYQKRIQDLGSNH-----KRNDNSQQSKDETYGLARKIEHLEISTRKMMGEG 120

Query: 121 LGTSSYEELQQLEQQLERSLSHIRARKHEVYREQIEQLKEKEKHLTAENAKLAKKYDVEE 180
           L  SS EELQQLE QL+RSL  IRA+K+++ RE+ E+LKEKE++L AEN  L +K +++ 
Sbjct: 121 LDASSIEELQQLENQLDRSLMKIRAKKYQLLREETEKLKEKERNLIAENKMLMEKCEMQG 180

Query: 181 E----RQQSPTQIQLAEVSPNYGESSSISDVETDLFIGPPKSR 219
                R  S +     ++  N  E      V TDLFIGPP++R
Sbjct: 181 RGIIGRISSSSSTSELDIDDNEME------VVTDLFIGPPETR 212

[Close]
BLAST of CsaV3_3G009400 vs. TAIR 10
Match: AT5G62165.1 (AGAMOUS-like 42 )

HSP 1 Score: 187.2 bits (474), Expect = 1.4e-47
Identity = 113/215 (52.56%), Postives = 151/215 (70.23%), Query Frame = 0 

Query: 1   MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAELALIIFSSRGKLYEFSSS 60
           MVRGK +M++IENATSRQVTFSKRRNGLLKKA+ELSVLCDA+L+LIIFS RG+LYEFSSS
Sbjct: 1   MVRGKIEMKKIENATSRQVTFSKRRNGLLKKAYELSVLCDAQLSLIIFSQRGRLYEFSSS 60

Query: 61  SMQATVGRYLRHTRSDQSHHLDQPLPHQHDLQAVQNEAASLLKEIESVEVSKRKLLGESL 120
            MQ T+ RY ++T+  ++ + D     Q  LQ ++ EA+ ++ +IE +E  KRKLLG+ +
Sbjct: 61  DMQKTIERYRKYTKDHETSNHDS----QIHLQQLKQEASHMITKIELLEFHKRKLLGQGI 120

Query: 121 GTSSYEELQQLEQQLERSLSHIRARKHEVYREQIEQLKEKEKHLTAENAKLAKKYDVEEE 180
            + S EELQ+++ QL+RSL  +R RK ++++EQ+E+LK KEK L  EN KL +K  +   
Sbjct: 121 ASCSLEELQEIDSQLQRSLGKVRERKAQLFKEQLEKLKAKEKQLLEENVKLHQKNVINPW 180

Query: 181 RQQSPTQIQLAEVSPNYGESSSISDVETDLFIGPP 216
           R  S  Q Q       Y       +VETDLFIG P
Sbjct: 181 RGSSTDQQQ-----EKYKVIDLNLEVETDLFIGLP 206

[Close]
BLAST of CsaV3_3G009400 vs. TAIR 10
Match: AT5G62165.2 (AGAMOUS-like 42 )

HSP 1 Score: 187.2 bits (474), Expect = 1.4e-47
Identity = 113/215 (52.56%), Postives = 151/215 (70.23%), Query Frame = 0 

Query: 1   MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAELALIIFSSRGKLYEFSSS 60
           MVRGK +M++IENATSRQVTFSKRRNGLLKKA+ELSVLCDA+L+LIIFS RG+LYEFSSS
Sbjct: 1   MVRGKIEMKKIENATSRQVTFSKRRNGLLKKAYELSVLCDAQLSLIIFSQRGRLYEFSSS 60

Query: 61  SMQATVGRYLRHTRSDQSHHLDQPLPHQHDLQAVQNEAASLLKEIESVEVSKRKLLGESL 120
            MQ T+ RY ++T+  ++ + D     Q  LQ ++ EA+ ++ +IE +E  KRKLLG+ +
Sbjct: 61  DMQKTIERYRKYTKDHETSNHDS----QIHLQQLKQEASHMITKIELLEFHKRKLLGQGI 120

Query: 121 GTSSYEELQQLEQQLERSLSHIRARKHEVYREQIEQLKEKEKHLTAENAKLAKKYDVEEE 180
            + S EELQ+++ QL+RSL  +R RK ++++EQ+E+LK KEK L  EN KL +K  +   
Sbjct: 121 ASCSLEELQEIDSQLQRSLGKVRERKAQLFKEQLEKLKAKEKQLLEENVKLHQKNVINPW 180

Query: 181 RQQSPTQIQLAEVSPNYGESSSISDVETDLFIGPP 216
           R  S  Q Q       Y       +VETDLFIG P
Sbjct: 181 RGSSTDQQQ-----EKYKVIDLNLEVETDLFIGLP 206

The following BLAST results are available for this feature:
BLAST of CsaV3_3G009400 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004133895.12.1e-109100.00MADS-box protein SOC1 isoform X1 [Cucumis sativus] >KGN56596.2 hypothetical prot... [more]
XP_031737728.14.4e-9993.64MADS-box protein SOC1 isoform X2 [Cucumis sativus][more]
XP_008438118.11.3e-9591.40PREDICTED: MADS-box protein SOC1-like isoform X1 [Cucumis melo] >XP_016898941.1 ... [more]
XP_008438119.14.3e-8685.52PREDICTED: MADS-box protein SOC1-like isoform X2 [Cucumis melo][more]
XP_038902636.11.0e-8485.97MADS-box protein SOC1-like [Benincasa hispida] >XP_038902644.1 MADS-box protein ... [more]
BLAST of CsaV3_3G009400 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O646452.1e-5660.91MADS-box protein SOC1 OS=Arabidopsis thaliana OX=3702 GN=SOC1 PE=1 SV=1[more]
O827433.3e-4954.59Agamous-like MADS-box protein AGL19 OS=Arabidopsis thaliana OX=3702 GN=AGL19 PE=... [more]
Q388381.2e-4654.26Agamous-like MADS-box protein AGL14 OS=Arabidopsis thaliana OX=3702 GN=AGL14 PE=... [more]
Q9FIS12.0e-4652.56MADS-box protein AGL42 OS=Arabidopsis thaliana OX=3702 GN=AGL42 PE=1 SV=1[more]
Q9XJ605.5e-4451.80MADS-box transcription factor 50 OS=Oryza sativa subsp. japonica OX=39947 GN=MAD... [more]
BLAST of CsaV3_3G009400 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S4DSH66.4e-9691.40MADS-box protein SOC1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483321 PE... [more]
A0A1S3AVA02.1e-8685.52MADS-box protein SOC1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483321 PE... [more]
A0A1S3AVP83.5e-7879.64MADS-box protein SOC1-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103483321 PE... [more]
A0A0A0L4C01.5e-76100.00K-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G124870 PE=4 ... [more]
A0A6J1D1771.5e-7678.08MADS-box protein SOC1-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC11101... [more]
BLAST of CsaV3_3G009400 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G45660.11.5e-5760.91AGAMOUS-like 20 [more]
AT4G22950.12.4e-5054.59AGAMOUS-like 19 [more]
AT4G11880.18.4e-4854.26AGAMOUS-like 14 [more]
AT5G62165.11.4e-4752.56AGAMOUS-like 42 [more]
AT5G62165.21.4e-4752.56AGAMOUS-like 42 [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 125..174
NoneNo IPR availableCOILSCoilCoilcoord: 91..111
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 175..220
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 182..207
NoneNo IPR availablePANTHERPTHR11945:SF341MADS-BOX PROTEIN SOC1coord: 1..216
NoneNo IPR availablePANTHERPTHR11945MADS BOX PROTEINcoord: 1..216
IPR002100Transcription factor, MADS-boxPRINTSPR00404MADSDOMAINcoord: 3..23
score: 63.49
coord: 38..59
score: 65.73
coord: 23..38
score: 83.07
IPR002100Transcription factor, MADS-boxSMARTSM00432madsneu2coord: 1..60
e-value: 1.6E-39
score: 147.3
IPR002100Transcription factor, MADS-boxPFAMPF00319SRF-TFcoord: 10..57
e-value: 4.1E-25
score: 87.0
IPR002100Transcription factor, MADS-boxPROSITEPS00350MADS_BOX_1coord: 3..57
IPR002100Transcription factor, MADS-boxPROSITEPS50066MADS_BOX_2coord: 1..61
score: 31.622824
IPR036879Transcription factor, MADS-box superfamilyGENE3D3.40.1810.10coord: 14..90
e-value: 5.7E-29
score: 102.1
IPR036879Transcription factor, MADS-box superfamilySUPERFAMILY55455SRF-likecoord: 3..85
IPR002487Transcription factor, K-boxPFAMPF01486K-boxcoord: 87..175
e-value: 2.7E-26
score: 91.6
IPR002487Transcription factor, K-boxPROSITEPS51297K_BOXcoord: 91..183
score: 14.977144
IPR033896MADS MEF2-likeCDDcd00265MADS_MEF2_likecoord: 3..78
e-value: 2.8985E-42
score: 135.758

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G009400.1CsaV3_3G009400.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045944 positive regulation of transcription by RNA polymerase II
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding