CsaV3_3G009170 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G009170
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr3: 7565603 .. 7565878 (-)
RNA-Seq ExpressionCsaV3_3G009170
SyntenyCsaV3_3G009170
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAACACTACAAGAAATCAGTGGTCTTCCGACCCTATCACGCGTCGGCATATATACACAAAGGCGTTAGGGCAAATCCTCCCGACGTACATGGTGTCGTTGAGAAGGAAGTCGGCGTCAGTGCGTCGGGAGAGGGATTCACAACGCGCAATGAAAATGCGTCAAAATGTCATACTCCCGATGCAGTCAATGCCAACAAATGGAGCACGTCGACAATAGGGGACTTTCGATGTTCTATCCCATGTAAAGGAAGGAGTGAGGGAGCAAACAAATAA

mRNA sequence

ATGAAACACTACAAGAAATCAGTGGTCTTCCGACCCTATCACGCGTCGGCATATATACACAAAGGCGTTAGGGCAAATCCTCCCGACGTACATGGTGTCGTTGAGAAGGAAGTCGGCGTCAGTGCGTCGGGAGAGGGATTCACAACGCGCAATGAAAATGCGTCAAAATGTCATACTCCCGATGCAGTCAATGCCAACAAATGGAGCACGTCGACAATAGGGGACTTTCGATGTTCTATCCCATGTAAAGGAAGGAGTGAGGGAGCAAACAAATAA

Coding sequence (CDS)

ATGAAACACTACAAGAAATCAGTGGTCTTCCGACCCTATCACGCGTCGGCATATATACACAAAGGCGTTAGGGCAAATCCTCCCGACGTACATGGTGTCGTTGAGAAGGAAGTCGGCGTCAGTGCGTCGGGAGAGGGATTCACAACGCGCAATGAAAATGCGTCAAAATGTCATACTCCCGATGCAGTCAATGCCAACAAATGGAGCACGTCGACAATAGGGGACTTTCGATGTTCTATCCCATGTAAAGGAAGGAGTGAGGGAGCAAACAAATAA

Protein sequence

MKHYKKSVVFRPYHASAYIHKGVRANPPDVHGVVEKEVGVSASGEGFTTRNENASKCHTPDAVNANKWSTSTIGDFRCSIPCKGRSEGANK*
Homology
[Close]
BLAST of CsaV3_3G009170 vs. NCBI nr
Match: KGN56543.1 (hypothetical protein Csa_010567 [Cucumis sativus])

HSP 1 Score: 193.7 bits (491), Expect = 6.8e-46
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0 

Query: 1  MKHYKKSVVFRPYHASAYIHKGVRANPPDVHGVVEKEVGVSASGEGFTTRNENASKCHTP 60
          MKHYKKSVVFRPYHASAYIHKGVRANPPDVHGVVEKEVGVSASGEGFTTRNENASKCHTP
Sbjct: 1  MKHYKKSVVFRPYHASAYIHKGVRANPPDVHGVVEKEVGVSASGEGFTTRNENASKCHTP 60

Query: 61 DAVNANKWSTSTIGDFRCSIPCKGRSEGANK 92
          DAVNANKWSTSTIGDFRCSIPCKGRSEGANK
Sbjct: 61 DAVNANKWSTSTIGDFRCSIPCKGRSEGANK 91

[Close]
BLAST of CsaV3_3G009170 vs. ExPASy TrEMBL
Match: A0A0A0L4A4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G123160 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 3.3e-46
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0 

Query: 1  MKHYKKSVVFRPYHASAYIHKGVRANPPDVHGVVEKEVGVSASGEGFTTRNENASKCHTP 60
          MKHYKKSVVFRPYHASAYIHKGVRANPPDVHGVVEKEVGVSASGEGFTTRNENASKCHTP
Sbjct: 1  MKHYKKSVVFRPYHASAYIHKGVRANPPDVHGVVEKEVGVSASGEGFTTRNENASKCHTP 60

Query: 61 DAVNANKWSTSTIGDFRCSIPCKGRSEGANK 92
          DAVNANKWSTSTIGDFRCSIPCKGRSEGANK
Sbjct: 61 DAVNANKWSTSTIGDFRCSIPCKGRSEGANK 91

The following BLAST results are available for this feature:
BLAST of CsaV3_3G009170 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN56543.16.8e-46100.00hypothetical protein Csa_010567 [Cucumis sativus][more]
BLAST of CsaV3_3G009170 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_3G009170 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L4A43.3e-46100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G123160 PE=4 SV=1[more]
BLAST of CsaV3_3G009170 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G009170.1CsaV3_3G009170.1mRNA