CsaV3_3G009140 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G009140
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	acyl-coenzyme A thioesterase 13
Location	chr3: 7553406 .. 7556442 (+)
RNA-Seq Expression	CsaV3_3G009140
Synteny	CsaV3_3G009140

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GATGATTTATTTACTCAGATAACAAAATAGGTAAAATATTTGTTAATTACATCCTAAATATTTTAACATAATCTATTTATGAATCATTATAGACTAATGTAAAACACAAATAGTATAGTATAGTCTTTGAAAATAAGTTTTATGTAATGGTTAAGAGAAACAGAATATTTAAATTTGATGGCAAAAAAAATACACAAAACGACGAAAACTAATTTTGGTAGCATTTGACCTAAAGGAAGAAGCCATTATCCGCTATTAACTTTTCGTACGAAAATCGAGTGGCAACATAGAAGGCAGTTGAGAGGATCACCAATGGCGAATTCTTCTTCTTCTTCGCCAATCCCTTCCTTAATCTTTGTGTCGCCGACGATTCAGATAAAGGATATGTCTGAACAAAATTTAATCGGAACTATTCAAATGTTCAATGAATTGACCGGCTCCGGCGCAATTCCGGACGATTGCGACACCAAGGCCTTTTATTCCCACATCACTAACGGTCATGTCCGCCAGCTCCACCGTGAACGAGGCCGTCTCACCTACCTCCTTTGCGTCAAACCTGCTGTAGCGGTAATTTCTTAATTCCCCTTCCAAATTTGTTCTCTGATCTGAACCGAAACAATGTCTTATCGAGCTTCCGATGTCTGTGAGAACTTGAAAAATTCACGATTCATCATTATTTGTTTTCCTATAAACGGTGGTTTCGGATGTGAATCGAAATGATATAATTGGGAACTTGAAAATTCGCTGTTCGTCAATGTAGTGATATGTTTGGTTGCGGAGATAATGTGGTTACTGATTTGAATGTAAACAGTATCTATGGAAACTTGAAAACTAAGTATTCATCCTTACAGCTAAGTATTCGTACTTATAGTAGTCTGTTGGATTGCTGGGAAAACGAGGTTTTTCAAATTCTCATCATTTGCATCTATCACTTTCCAGTCTCTTGTATCAATCAATATTATTTACATTCACGTTAAAGAAAGATATATGTTGTGAAATTTCAGAATGTTTATGGGTTTTTACATGGAGGATTTGTTGCTACGGTTGCGGAGCTCGTATCAATAGCTTGTGCCAGAACTGTCGTGGGTGAGGATAAGAAATTATTTATTGGGGAACTGAGCATTTCTTATCTCTCTGGTGCTCCGGAAAATGTGAGTAAAATTTAAGTTACTGTTTGCTTCCTTGTGATTTTAAGTTGGGGCCTGTGAAGTAGGATAGTTAAGCTGACAAAATTGTCTACCAAATTGACCAAAACTGAGTCAAAACTCGAACCAACAGAACCAACCAAAACGAAATGAACTAGTAGAACTAACAACATCGGAATGGACAAACTTCGCCACTTCAAATTTAATGAACCCAATTGGTTTGTTCAGTTAATTTTCTTGGTTTTTCTTTTCCAGTTTAGAAAGCTAAAAAGTTTATAGTAGAAACTGAATGTTTAGATTTCTCGGACGTTAGAGTCCTGAGATTGTTTTCGAGGGCACTGCATTCTCAAACTTTTGTGTACTTAACCATACATGGGCTGGAAGGTTGCATGAATCTATCAGTGTCAATGTTTTATGAGTTGGGTGTGAGCATCAAGTATGCTTTATGAAGTATTTTCAATAGGTTTGTTCGCTTTAGCTCACTTTCAAAAAACCTCACACTCATAATTTATGGAGAAGTACCATTCCTTTTCCTTTTTACGGGGATTAAGAAGAAGTGCCCTCATCCAAATCCTGAGTTTTCTATTTGAGAGATTAAGAATTACATTGTCACGCTTTACAATCTTCTTGGTGTGGGATCAGTATTATATTACCACCACAATCTACATCAGAACCAGAACCACAAATGGGACTGAGTTAGGTTGACTGTTCTAGGTCGGATATCGAAGTAGTTTGGTACAATGAGAATAAGAAGAAACTTATCTTAACAGTAAAGATTGAAATTATACAAAACCGAAGCTTGAATTCAAGTAGGAAGCCACTCATCCATCATTGTTTGCATCAAGTCTTCAATTCACACGTCGGTAAAGATGGTATAGCATTCAGGAGATAGTGAGCAGATGTTTTATGATCCGGGCAGTGTGTGTGTGTGGGTTAAATACTTATTAAGGATATATCTCAGTTTTACATACATTTTTATTCAATTATTTGTCTTTTCATCCCACATTAGAAAATTCAGGATTTCTTTACTTTCCATAGAAGATACAAATTTCAAGGTAAAAATGGAGCCAAGAGCTCTTCAGACGGAATTAACATTGTGAGATAAATATTGTTGTATTTCTCTCTTTAAAGTTATGTAGCTATCATTAGCTATACATGCAAGGAAAAGGGAAACCCTATCATTAGCTATCATTGTATTTGTTACTTCTTGTTGACCGTCCTTCATTGGAAAGCTGTGAATTGATTTAATTCCTCCTCAACTCCCTGTGTCAATTGTTTTCGAGTAGAAACTCGAACTCCATGATTATTATTAATTCAATTTTCAGACCTTATTTCTGAGTTGGGCATAAAAATTTGTTGGTGCAGGCAGAGGTTATAGTAGAAGCTTCTGTTTTGAGGAGTGGAAGAAGTTTGAGTGTGGTGGAAGTAGAGTTTAAACTTCAAAAGACAGGTAAGTTGGTGTACACAGCTCGTTTTACCCTTTATAACATGCCAATGGCAAAGCTATAGAAATCCTTGGTTCGTTCTACCTAAGATCAAAATTTGTCAGCAACCTAAATAAAAACCCCAATGCTTCGAGTCGAAGAATCGTGTTGCTCAGTGTAATGTTCAAAAGAGTAGGGAATGTGTATGGATTACACACTTGATTATCCTTGTATACTATATATATATATATTTGCAAATTATAGAAAATAGTTCAGTTTCTTGCTTCAATATTTTGTATAGTCACGTTCATGTATGGATTAGATTAGAATCTTTACTGTCATTTTGTTTTAGTTTTTTAATAGTTAGTAAAGTTTTCGAACATTTTATTTTGCTAGATAAAAACATACATTGATGTTTACATAATTGAATTAAATATACCGTTCCTTCTTTTTCTTTTTTTTCTTTTT

mRNA sequence

ATGGCGAATTCTTCTTCTTCTTCGCCAATCCCTTCCTTAATCTTTGTGTCGCCGACGATTCAGATAAAGGATATGTCTGAACAAAATTTAATCGGAACTATTCAAATGTTCAATGAATTGACCGGCTCCGGCGCAATTCCGGACGATTGCGACACCAAGGCCTTTTATTCCCACATCACTAACGGTCATGTCCGCCAGCTCCACCGTGAACGAGGCCGTCTCACCTACCTCCTTTGCGTCAAACCTGCTGTAGCGAATGTTTATGGGTTTTTACATGGAGGATTTGTTGCTACGGTTGCGGAGCTCGTATCAATAGCTTGTGCCAGAACTGTCGTGGGTGAGGATAAGAAATTATTTATTGGGGAACTGAGCATTTCTTATCTCTCTGGTGCTCCGGAAAATGCAGAGGTTATAGTAGAAGCTTCTGTTTTGAGGAGTGGAAGAAGTTTGAGTGTGGTGGAAGTAGAGTTTAAACTTCAAAAGACAGGTAAGTTGGTGTACACAGCTCGTTTTACCCTTTATAACATGCCAATGGCAAAGCTATAG

Coding sequence (CDS)

ATGGCGAATTCTTCTTCTTCTTCGCCAATCCCTTCCTTAATCTTTGTGTCGCCGACGATTCAGATAAAGGATATGTCTGAACAAAATTTAATCGGAACTATTCAAATGTTCAATGAATTGACCGGCTCCGGCGCAATTCCGGACGATTGCGACACCAAGGCCTTTTATTCCCACATCACTAACGGTCATGTCCGCCAGCTCCACCGTGAACGAGGCCGTCTCACCTACCTCCTTTGCGTCAAACCTGCTGTAGCGAATGTTTATGGGTTTTTACATGGAGGATTTGTTGCTACGGTTGCGGAGCTCGTATCAATAGCTTGTGCCAGAACTGTCGTGGGTGAGGATAAGAAATTATTTATTGGGGAACTGAGCATTTCTTATCTCTCTGGTGCTCCGGAAAATGCAGAGGTTATAGTAGAAGCTTCTGTTTTGAGGAGTGGAAGAAGTTTGAGTGTGGTGGAAGTAGAGTTTAAACTTCAAAAGACAGGTAAGTTGGTGTACACAGCTCGTTTTACCCTTTATAACATGCCAATGGCAAAGCTATAG

Protein sequence

MANSSSSSPIPSLIFVSPTIQIKDMSEQNLIGTIQMFNELTGSGAIPDDCDTKAFYSHITNGHVRQLHRERGRLTYLLCVKPAVANVYGFLHGGFVATVAELVSIACARTVVGEDKKLFIGELSISYLSGAPENAEVIVEASVLRSGRSLSVVEVEFKLQKTGKLVYTARFTLYNMPMAKL*

Homology

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BLAST of CsaV3_3G009140 vs. NCBI nr
Match: XP_004133876.1 (acyl-coenzyme A thioesterase 13 [Cucumis sativus] >KGN56540.1 hypothetical protein Csa_010281 [Cucumis sativus])

HSP 1 Score: 353.2 bits (905), Expect = 1.3e-93
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0


Query: 1   MANSSSSSPIPSLIFVSPTIQIKDMSEQNLIGTIQMFNELTGSGAIPDDCDTKAFYSHIT 60
           MANSSSSSPIPSLIFVSPTIQIKDMSEQNLIGTIQMFNELTGSGAIPDDCDTKAFYSHIT
Sbjct: 1   MANSSSSSPIPSLIFVSPTIQIKDMSEQNLIGTIQMFNELTGSGAIPDDCDTKAFYSHIT 60

Query: 61  NGHVRQLHRERGRLTYLLCVKPAVANVYGFLHGGFVATVAELVSIACARTVVGEDKKLFI 120
           NGHVRQLHRERGRLTYLLCVKPAVANVYGFLHGGFVATVAELVSIACARTVVGEDKKLFI
Sbjct: 61  NGHVRQLHRERGRLTYLLCVKPAVANVYGFLHGGFVATVAELVSIACARTVVGEDKKLFI 120

Query: 121 GELSISYLSGAPENAEVIVEASVLRSGRSLSVVEVEFKLQKTGKLVYTARFTLYNMPMAK 180
           GELSISYLSGAPENAEVIVEASVLRSGRSLSVVEVEFKLQKTGKLVYTARFTLYNMPMAK
Sbjct: 121 GELSISYLSGAPENAEVIVEASVLRSGRSLSVVEVEFKLQKTGKLVYTARFTLYNMPMAK 180

Query: 181 L 182
           L
Sbjct: 181 L 181

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BLAST of CsaV3_3G009140 vs. NCBI nr
Match: XP_008438081.1 (PREDICTED: acyl-coenzyme A thioesterase 13 [Cucumis melo] >KAA0048986.1 acyl-coenzyme A thioesterase 13 [Cucumis melo var. makuwa] >TYK17578.1 acyl-coenzyme A thioesterase 13 [Cucumis melo var. makuwa])

HSP 1 Score: 305.1 bits (780), Expect = 4.2e-79
Identity = 155/180 (86.11%), Postives = 167/180 (92.78%), Query Frame = 0


Query: 2   ANSSSSSPIPSLIFVSPTIQIKDMSEQNLIGTIQMFNELTGSGAIPDDCDTKAFYSHITN 61
           ++SSSSS IPSLIF SPTIQIK +SE++L  TIQMFN LTGSG IPDDCDTKAFYSHIT 
Sbjct: 5   SSSSSSSEIPSLIFQSPTIQIKGISEEDLRETIQMFNGLTGSGQIPDDCDTKAFYSHITR 64

Query: 62  GHVRQLHRERGRLTYLLCVKPAVANVYGFLHGGFVATVAELVSIACARTVVGEDKKLFIG 121
           GH+RQL RERGRLTYLLCVKPAV+N+YG+LHGGFVA  AE +SIACARTVVGEDKKLFIG
Sbjct: 65  GHLRQLRRERGRLTYLLCVKPAVSNIYGYLHGGFVAAAAEFLSIACARTVVGEDKKLFIG 124

Query: 122 ELSISYLSGAPENAEVIVEASVLRSGRSLSVVEVEFKLQKTGKLVYTARFTLYNMPMAKL 181
           ELSISYLSGAPENAEV+V+ASVLRSGRSLSVVEVEFKLQKTGKLVYTAR TLYNMPMAKL
Sbjct: 125 ELSISYLSGAPENAEVVVDASVLRSGRSLSVVEVEFKLQKTGKLVYTARSTLYNMPMAKL 184

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BLAST of CsaV3_3G009140 vs. NCBI nr
Match: XP_038892661.1 (uncharacterized protein LOC120081650 isoform X1 [Benincasa hispida])

HSP 1 Score: 274.2 bits (700), Expect = 7.8e-70
Identity = 141/176 (80.11%), Postives = 154/176 (87.50%), Query Frame = 0


Query: 6   SSSPIPSLIFVSPTIQIKDMSEQNLIGTIQMFNELTGSGAIPDDCDTKAFYSHITNGHVR 65
           SSS IP LI  SPTIQIKDMSE++L GTI M N LTGSG IPDDC+TK+FYS IT GH+R
Sbjct: 5   SSSAIPPLILESPTIQIKDMSEEDLHGTITMLNGLTGSGQIPDDCNTKSFYSDITRGHLR 64

Query: 66  QLHRERGRLTYLLCVKPAVANVYGFLHGGFVATVAELVSIACARTVVGEDKKLFIGELSI 125
           QL  ERG LTYLL VKPAV+N+YGFLHGGFVA  AE +SIACARTVVG DK+LFIGELSI
Sbjct: 65  QLRLERGHLTYLLTVKPAVSNIYGFLHGGFVAAAAEFLSIACARTVVGPDKELFIGELSI 124

Query: 126 SYLSGAPENAEVIVEASVLRSGRSLSVVEVEFKLQKTGKLVYTARFTLYNMPMAKL 182
           S+LSGAP NAEV+V+ASVLRSGRSLSVV VEF+LQKTGKLVYTAR TLYNMPMAKL
Sbjct: 125 SFLSGAPGNAEVVVDASVLRSGRSLSVVGVEFRLQKTGKLVYTARSTLYNMPMAKL 180

[Close]

BLAST of CsaV3_3G009140 vs. NCBI nr
Match: XP_038892740.1 (uncharacterized protein LOC120081650 isoform X2 [Benincasa hispida])

HSP 1 Score: 267.3 bits (682), Expect = 9.6e-68
Identity = 140/176 (79.55%), Postives = 152/176 (86.36%), Query Frame = 0


Query: 6   SSSPIPSLIFVSPTIQIKDMSEQNLIGTIQMFNELTGSGAIPDDCDTKAFYSHITNGHVR 65
           SSS IP LI  SPTIQIKDMSE++L GTI M N LTGSG IPDDC+TK+FYS IT GH+R
Sbjct: 5   SSSAIPPLILESPTIQIKDMSEEDLHGTITMLNGLTGSGQIPDDCNTKSFYSDITRGHLR 64

Query: 66  QLHRERGRLTYLLCVKPAVANVYGFLHGGFVATVAELVSIACARTVVGEDKKLFIGELSI 125
           QL  ERG LTYLL VKP  AN+YGFLHGGFVA  AE +SIACARTVVG DK+LFIGELSI
Sbjct: 65  QLRLERGHLTYLLTVKP--ANIYGFLHGGFVAAAAEFLSIACARTVVGPDKELFIGELSI 124

Query: 126 SYLSGAPENAEVIVEASVLRSGRSLSVVEVEFKLQKTGKLVYTARFTLYNMPMAKL 182
           S+LSGAP NAEV+V+ASVLRSGRSLSVV VEF+LQKTGKLVYTAR TLYNMPMAKL
Sbjct: 125 SFLSGAPGNAEVVVDASVLRSGRSLSVVGVEFRLQKTGKLVYTARSTLYNMPMAKL 178

[Close]

BLAST of CsaV3_3G009140 vs. NCBI nr
Match: XP_023526383.1 (acyl-coenzyme A thioesterase 13-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 261.2 bits (666), Expect = 6.9e-66
Identity = 131/180 (72.78%), Postives = 152/180 (84.44%), Query Frame = 0


Query: 2   ANSSSSSPIPSLIFVSPTIQIKDMSEQNLIGTIQMFNELTGSGAIPDDCDTKAFYSHITN 61
           + + SSS  PSLIF SPTIQIKDMSE++L GTI++ N L GSG IPDDC+TK FYS I  
Sbjct: 30  SETPSSSATPSLIFDSPTIQIKDMSEEDLRGTIELLNGLGGSGQIPDDCNTKGFYSDIIR 89

Query: 62  GHVRQLHRERGRLTYLLCVKPAVANVYGFLHGGFVATVAELVSIACARTVVGEDKKLFIG 121
           GH+RQ   ERGRLTYLL VKPAV+N YGFLHGGFVA  AE  SIACARTV+ EDK+LF+G
Sbjct: 90  GHLRQRRLERGRLTYLLSVKPAVSNRYGFLHGGFVAAAAEFSSIACARTVMAEDKELFLG 149

Query: 122 ELSISYLSGAPENAEVIVEASVLRSGRSLSVVEVEFKLQKTGKLVYTARFTLYNMPMAKL 181
           ELSISYLSGAP NAEVI++AS+LRSG+ L+VV ++F+LQKTGKL+YTAR TLYNMPMAKL
Sbjct: 150 ELSISYLSGAPRNAEVIIDASILRSGKHLNVVAIDFRLQKTGKLIYTARSTLYNMPMAKL 209

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BLAST of CsaV3_3G009140 vs. ExPASy Swiss-Prot
Match: P34419 (Putative esterase F42H10.6 OS=Caenorhabditis elegans OX=6239 GN=F42H10.6 PE=1 SV=2)

HSP 1 Score: 52.4 bits (124), Expect = 6.4e-06
Identity = 41/156 (26.28%), Postives = 77/156 (49.36%), Query Frame = 0


Query: 22  IKDMSEQNLIGTIQMFNELTGSGAIPDDCDTKAFYSHITNGHVRQLHRERGRLTYLLCVK 81
           I+  SE+ L   +++FN++ GS            ++ +    V  +   + +L   + V+
Sbjct: 13  IEPTSEELLAEQVRVFNKMKGS----------TNFNRVAE-DVYPVEVTKSKLVCEMVVQ 72

Query: 82  PAVANVYGFLHGGFVATVAELVSIACARTVVGEDKKLFIGELSISYLSGAPENAEVIVEA 141
               N  G LHGG  AT+ ++++ A A  V  +DK +   EL++SYL        + + A
Sbjct: 73  HQHLNSKGTLHGGQTATLTDVIT-ARAVGVTVKDKGMASVELAVSYLLPVKVGDVLEITA 132

Query: 142 SVLRSGRSLSVVEVEFKLQKTGKLVYTARFTLYNMP 178
            VL+ GR+++  + EF+ +  GK+    + TL  +P
Sbjct: 133 HVLKVGRTMAFTDCEFRRKSDGKMSAKGKHTLAFLP 156

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BLAST of CsaV3_3G009140 vs. ExPASy Swiss-Prot
Match: Q9NPJ3 (Acyl-coenzyme A thioesterase 13 OS=Homo sapiens OX=9606 GN=ACOT13 PE=1 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 1.6e-04
Identity = 31/121 (25.62%), Postives = 58/121 (47.93%), Query Frame = 0


Query: 52  TKAFYSHITNGHVRQLHRERGRLTYLLCVKPAVANVYGFLHGGFVATVAELVSIACARTV 111
           TKA       G +  +    G++   + V+    N  G LHGG  AT+ + +S       
Sbjct: 16  TKARNFERVLGKITLVSAAPGKVICEMKVEEEHTNAIGTLHGGLTATLVDNISTMALLCT 75

Query: 112 VGEDKKLFIGELSISYLSGAPENAEVIVEASVLRSGRSLSVVEVEFKLQKTGKLVYTARF 171
                 + + +++I+Y+S A    ++++ A VL+ G++L+   V+   + TGKL+   R 
Sbjct: 76  ERGAPGVSV-DMNITYMSPAKLGEDIVITAHVLKQGKTLAFTSVDLTNKATGKLIAQGRH 135

Query: 172 T 173
           T
Sbjct: 136 T 135

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BLAST of CsaV3_3G009140 vs. ExPASy Swiss-Prot
Match: Q5R833 (Acyl-coenzyme A thioesterase 13 OS=Pongo abelii OX=9601 GN=ACOT13 PE=2 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 1.6e-04
Identity = 31/121 (25.62%), Postives = 58/121 (47.93%), Query Frame = 0


Query: 52  TKAFYSHITNGHVRQLHRERGRLTYLLCVKPAVANVYGFLHGGFVATVAELVSIACARTV 111
           TKA       G +  +    G++   + V+    N  G LHGG  AT+ + +S       
Sbjct: 16  TKARNFERVLGKITLVSAAPGKVICEMKVEEEHTNAIGTLHGGLTATLVDNISTMALLCT 75

Query: 112 VGEDKKLFIGELSISYLSGAPENAEVIVEASVLRSGRSLSVVEVEFKLQKTGKLVYTARF 171
                 + + +++I+Y+S A    ++++ A VL+ G++L+   V+   + TGKL+   R 
Sbjct: 76  ERGAPGVSV-DMNITYMSPAKLGEDIVITAHVLKQGKTLAFTSVDLTNKATGKLIAQGRH 135

Query: 172 T 173
           T
Sbjct: 136 T 135

[Close]

BLAST of CsaV3_3G009140 vs. ExPASy Swiss-Prot
Match: Q9CQR4 (Acyl-coenzyme A thioesterase 13 OS=Mus musculus OX=10090 GN=Acot13 PE=1 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 3.5e-04
Identity = 28/99 (28.28%), Postives = 51/99 (51.52%), Query Frame = 0


Query: 77  LLC---VKPAVANVYGFLHGGFVATVAELVSIACARTVVGEDKKLFIGELSISYLSGAPE 136
           L+C   V+    N  G LHGG  AT+ + +S             + + +++I+Y+S A  
Sbjct: 38  LICEMKVEEQHTNKLGTLHGGLTATLVDSISTMALMCTERGAPGVSV-DMNITYMSPAKI 97

Query: 137 NAEVIVEASVLRSGRSLSVVEVEFKLQKTGKLVYTARFT 173
             E+++ A +L+ G++L+   V+   + TGKL+   R T
Sbjct: 98  GEEIVITAHILKQGKTLAFASVDLTNKTTGKLIAQGRHT 135

[Close]

BLAST of CsaV3_3G009140 vs. ExPASy TrEMBL
Match: A0A0A0L3N5 (4HBT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G122640 PE=3 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 6.4e-94
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0


Query: 1   MANSSSSSPIPSLIFVSPTIQIKDMSEQNLIGTIQMFNELTGSGAIPDDCDTKAFYSHIT 60
           MANSSSSSPIPSLIFVSPTIQIKDMSEQNLIGTIQMFNELTGSGAIPDDCDTKAFYSHIT
Sbjct: 1   MANSSSSSPIPSLIFVSPTIQIKDMSEQNLIGTIQMFNELTGSGAIPDDCDTKAFYSHIT 60

Query: 61  NGHVRQLHRERGRLTYLLCVKPAVANVYGFLHGGFVATVAELVSIACARTVVGEDKKLFI 120
           NGHVRQLHRERGRLTYLLCVKPAVANVYGFLHGGFVATVAELVSIACARTVVGEDKKLFI
Sbjct: 61  NGHVRQLHRERGRLTYLLCVKPAVANVYGFLHGGFVATVAELVSIACARTVVGEDKKLFI 120

Query: 121 GELSISYLSGAPENAEVIVEASVLRSGRSLSVVEVEFKLQKTGKLVYTARFTLYNMPMAK 180
           GELSISYLSGAPENAEVIVEASVLRSGRSLSVVEVEFKLQKTGKLVYTARFTLYNMPMAK
Sbjct: 121 GELSISYLSGAPENAEVIVEASVLRSGRSLSVVEVEFKLQKTGKLVYTARFTLYNMPMAK 180

Query: 181 L 182
           L
Sbjct: 181 L 181

[Close]

BLAST of CsaV3_3G009140 vs. ExPASy TrEMBL
Match: A0A5A7U3Z9 (Acyl-coenzyme A thioesterase 13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G004480 PE=3 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 2.0e-79
Identity = 155/180 (86.11%), Postives = 167/180 (92.78%), Query Frame = 0


Query: 2   ANSSSSSPIPSLIFVSPTIQIKDMSEQNLIGTIQMFNELTGSGAIPDDCDTKAFYSHITN 61
           ++SSSSS IPSLIF SPTIQIK +SE++L  TIQMFN LTGSG IPDDCDTKAFYSHIT 
Sbjct: 5   SSSSSSSEIPSLIFQSPTIQIKGISEEDLRETIQMFNGLTGSGQIPDDCDTKAFYSHITR 64

Query: 62  GHVRQLHRERGRLTYLLCVKPAVANVYGFLHGGFVATVAELVSIACARTVVGEDKKLFIG 121
           GH+RQL RERGRLTYLLCVKPAV+N+YG+LHGGFVA  AE +SIACARTVVGEDKKLFIG
Sbjct: 65  GHLRQLRRERGRLTYLLCVKPAVSNIYGYLHGGFVAAAAEFLSIACARTVVGEDKKLFIG 124

Query: 122 ELSISYLSGAPENAEVIVEASVLRSGRSLSVVEVEFKLQKTGKLVYTARFTLYNMPMAKL 181
           ELSISYLSGAPENAEV+V+ASVLRSGRSLSVVEVEFKLQKTGKLVYTAR TLYNMPMAKL
Sbjct: 125 ELSISYLSGAPENAEVVVDASVLRSGRSLSVVEVEFKLQKTGKLVYTARSTLYNMPMAKL 184

[Close]

BLAST of CsaV3_3G009140 vs. ExPASy TrEMBL
Match: A0A1S3AVH8 (acyl-coenzyme A thioesterase 13 OS=Cucumis melo OX=3656 GN=LOC103483296 PE=3 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 2.0e-79
Identity = 155/180 (86.11%), Postives = 167/180 (92.78%), Query Frame = 0


Query: 2   ANSSSSSPIPSLIFVSPTIQIKDMSEQNLIGTIQMFNELTGSGAIPDDCDTKAFYSHITN 61
           ++SSSSS IPSLIF SPTIQIK +SE++L  TIQMFN LTGSG IPDDCDTKAFYSHIT 
Sbjct: 5   SSSSSSSEIPSLIFQSPTIQIKGISEEDLRETIQMFNGLTGSGQIPDDCDTKAFYSHITR 64

Query: 62  GHVRQLHRERGRLTYLLCVKPAVANVYGFLHGGFVATVAELVSIACARTVVGEDKKLFIG 121
           GH+RQL RERGRLTYLLCVKPAV+N+YG+LHGGFVA  AE +SIACARTVVGEDKKLFIG
Sbjct: 65  GHLRQLRRERGRLTYLLCVKPAVSNIYGYLHGGFVAAAAEFLSIACARTVVGEDKKLFIG 124

Query: 122 ELSISYLSGAPENAEVIVEASVLRSGRSLSVVEVEFKLQKTGKLVYTARFTLYNMPMAKL 181
           ELSISYLSGAPENAEV+V+ASVLRSGRSLSVVEVEFKLQKTGKLVYTAR TLYNMPMAKL
Sbjct: 125 ELSISYLSGAPENAEVVVDASVLRSGRSLSVVEVEFKLQKTGKLVYTARSTLYNMPMAKL 184

[Close]

BLAST of CsaV3_3G009140 vs. ExPASy TrEMBL
Match: A0A6J1EC92 (acyl-coenzyme A thioesterase 13-like OS=Cucurbita moschata OX=3662 GN=LOC111431890 PE=3 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 9.7e-66
Identity = 131/176 (74.43%), Postives = 150/176 (85.23%), Query Frame = 0


Query: 6   SSSPIPSLIFVSPTIQIKDMSEQNLIGTIQMFNELTGSGAIPDDCDTKAFYSHITNGHVR 65
           SSS  PSLIF SPTIQIKD+SE++L GTI++ N L GSG IPDDC+TK FYS I  GH+R
Sbjct: 5   SSSATPSLIFDSPTIQIKDVSEEDLRGTIELLNGLGGSGQIPDDCNTKGFYSDIIRGHLR 64

Query: 66  QLHRERGRLTYLLCVKPAVANVYGFLHGGFVATVAELVSIACARTVVGEDKKLFIGELSI 125
           Q   ERGRLTYLL VKPAV+N YGFLHGGFVA  AE  SIACARTV+ EDK+LF+GELSI
Sbjct: 65  QRRLERGRLTYLLSVKPAVSNRYGFLHGGFVAAAAEFSSIACARTVMAEDKELFLGELSI 124

Query: 126 SYLSGAPENAEVIVEASVLRSGRSLSVVEVEFKLQKTGKLVYTARFTLYNMPMAKL 182
           SYLSGAP NAEVI++AS+LRSG+ L+VV ++F+LQKTGKLVYTAR TLYNMPMAKL
Sbjct: 125 SYLSGAPPNAEVIIDASILRSGKHLNVVAIDFRLQKTGKLVYTARSTLYNMPMAKL 180

[Close]

BLAST of CsaV3_3G009140 vs. ExPASy TrEMBL
Match: A0A6J1IR82 (uncharacterized protein LOC111479273 OS=Cucurbita maxima OX=3661 GN=LOC111479273 PE=3 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 1.3e-65
Identity = 130/176 (73.86%), Postives = 150/176 (85.23%), Query Frame = 0


Query: 6   SSSPIPSLIFVSPTIQIKDMSEQNLIGTIQMFNELTGSGAIPDDCDTKAFYSHITNGHVR 65
           SSS  PSLIF SPTIQIKDMSE++L GTI++ N L+GSG IPDDC+TK FYS I  GH+ 
Sbjct: 59  SSSETPSLIFDSPTIQIKDMSEEDLRGTIELLNGLSGSGQIPDDCNTKGFYSDIIRGHLW 118

Query: 66  QLHRERGRLTYLLCVKPAVANVYGFLHGGFVATVAELVSIACARTVVGEDKKLFIGELSI 125
           Q   ERGRLTYLL VKPAV+N YGFLHGGFVA  AE  SIACARTV+ EDK+LF+GELSI
Sbjct: 119 QRRLERGRLTYLLSVKPAVSNRYGFLHGGFVAAAAEFSSIACARTVMAEDKELFLGELSI 178

Query: 126 SYLSGAPENAEVIVEASVLRSGRSLSVVEVEFKLQKTGKLVYTARFTLYNMPMAKL 182
           SYLSGAP NAEVI++AS+LRSG+ L+VV ++F+LQKTGKL+YTAR TLYNMPMAKL
Sbjct: 179 SYLSGAPRNAEVIIDASILRSGKHLNVVAIDFRLQKTGKLIYTARSTLYNMPMAKL 234

[Close]

BLAST of CsaV3_3G009140 vs. TAIR 10
Match: AT3G61200.1 (Thioesterase superfamily protein )

HSP 1 Score: 129.0 bits (323), Expect = 3.8e-30
Identity = 72/176 (40.91%), Postives = 112/176 (63.64%), Query Frame = 0


Query: 6   SSSPIPSLIFVSPTIQIKDMSEQNLIGTIQMFNELTGSGAIPDDCDTKAFYSHITNGHVR 65
           SS+PI      S T  +  + + N +  +  F +        +D  +   +S +   + R
Sbjct: 18  SSTPIS-----SDTTAVSKVIDPNYVLMVADFFKAISPDESCNDFTSFDSFSVLFQNNTR 77

Query: 66  QLHRERGRLTYLLCVKPAVANVYGFLHGGFVATVAELVSIACARTVVGEDKKLFIGELSI 125
            L   RGR++  + V P ++N +  LHGG VA++AE V++AC +TVV EDK LFIGELS+
Sbjct: 78  ALSIARGRVSCSVTVTPGISNFFKGLHGGAVASIAERVAMACVKTVVSEDKHLFIGELSM 137

Query: 126 SYLSGAPENAEVIVEASVLRSGRSLSVVEVEFKLQKTGKLVYTARFTLYNMPMAKL 182
           SYLS AP ++E++VE +V+R+GR+LSVV VEFK+++T K+ Y +R T Y+ P++KL
Sbjct: 138 SYLSSAPISSELLVEGTVVRTGRNLSVVTVEFKIKETMKVTYLSRATFYHSPISKL 188

[Close]

BLAST of CsaV3_3G009140 vs. TAIR 10
Match: AT1G04290.1 (Thioesterase superfamily protein )

HSP 1 Score: 67.8 bits (164), Expect = 1.0e-11
Identity = 41/123 (33.33%), Postives = 67/123 (54.47%), Query Frame = 0


Query: 59  ITNGHVRQLHRERGRLTYLLCVKPAVANVYGFLHGGFVATVAELVSIACARTVVGEDKKL 118
           +TNG    L  E GR+   + + P + N   FLHGG  AT+ +L+  A   T       +
Sbjct: 35  VTNGLKVDL-IEPGRIVCSMKIPPHLLNAGKFLHGGATATLVDLIGSAVIYTAGASHSGV 94

Query: 119 FIGELSISYLSGAPENAEVIVEASVLRSGRSLSVVEVEFKLQKTGKLVYTARFTLYNMPM 178
            + E+++SYL  A  + E+ +E+  LR G++++VV VE + + TGK++   R T Y  P 
Sbjct: 95  SV-EINVSYLDAAFLDEEIEIESKALRVGKAVAVVSVELRKKTTGKIIAQGRHTKYFAPR 154

Query: 179 AKL 182
           + L
Sbjct: 155 SNL 155

The following BLAST results are available for this feature:

BLAST of CsaV3_3G009140 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004133876.1	1.3e-93	100.00	acyl-coenzyme A thioesterase 13 [Cucumis sativus] >KGN56540.1 hypothetical prote...	[more]
XP_008438081.1	4.2e-79	86.11	PREDICTED: acyl-coenzyme A thioesterase 13 [Cucumis melo] >KAA0048986.1 acyl-coe...	[more]
XP_038892661.1	7.8e-70	80.11	uncharacterized protein LOC120081650 isoform X1 [Benincasa hispida]	[more]
XP_038892740.1	9.6e-68	79.55	uncharacterized protein LOC120081650 isoform X2 [Benincasa hispida]	[more]
XP_023526383.1	6.9e-66	72.78	acyl-coenzyme A thioesterase 13-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsaV3_3G009140 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P34419	6.4e-06	26.28	Putative esterase F42H10.6 OS=Caenorhabditis elegans OX=6239 GN=F42H10.6 PE=1 SV...	[more]
Q9NPJ3	1.6e-04	25.62	Acyl-coenzyme A thioesterase 13 OS=Homo sapiens OX=9606 GN=ACOT13 PE=1 SV=1	[more]
Q5R833	1.6e-04	25.62	Acyl-coenzyme A thioesterase 13 OS=Pongo abelii OX=9601 GN=ACOT13 PE=2 SV=1	[more]
Q9CQR4	3.5e-04	28.28	Acyl-coenzyme A thioesterase 13 OS=Mus musculus OX=10090 GN=Acot13 PE=1 SV=1	[more]

BLAST of CsaV3_3G009140 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L3N5	6.4e-94	100.00	4HBT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G122640 PE=3 S...	[more]
A0A5A7U3Z9	2.0e-79	86.11	Acyl-coenzyme A thioesterase 13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S3AVH8	2.0e-79	86.11	acyl-coenzyme A thioesterase 13 OS=Cucumis melo OX=3656 GN=LOC103483296 PE=3 SV=...	[more]
A0A6J1EC92	9.7e-66	74.43	acyl-coenzyme A thioesterase 13-like OS=Cucurbita moschata OX=3662 GN=LOC1114318...	[more]
A0A6J1IR82	1.3e-65	73.86	uncharacterized protein LOC111479273 OS=Cucurbita maxima OX=3661 GN=LOC111479273...	[more]

BLAST of CsaV3_3G009140 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G61200.1	3.8e-30	40.91	Thioesterase superfamily protein	[more]
AT1G04290.1	1.0e-11	33.33	Thioesterase superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006683	Thioesterase domain	PFAM	PF03061	4HBT	coord: 88..163 e-value: 5.6E-13 score: 49.0
None	No IPR available	GENE3D	3.10.129.10	Hotdog Thioesterase	coord: 49..178 e-value: 3.0E-29 score: 103.7
None	No IPR available	PANTHER	PTHR21660:SF12	OS07G0462700 PROTEIN	coord: 17..181
None	No IPR available	CDD	cd03443	PaaI_thioesterase	coord: 62..174 e-value: 1.29548E-21 score: 82.9909
IPR039298	Acyl-coenzyme A thioesterase 13	PANTHER	PTHR21660	THIOESTERASE SUPERFAMILY MEMBER-RELATED	coord: 17..181
IPR029069	HotDog domain superfamily	SUPERFAMILY	54637	Thioesterase/thiol ester dehydrase-isomerase	coord: 64..177

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G009140.1	CsaV3_3G009140.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0047617	acyl-CoA hydrolase activity