CsaV3_3G009070 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G009070
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Zinc finger, LIM-type
Location	chr3: 7518626 .. 7521430 (+)
RNA-Seq Expression	CsaV3_3G009070
Synteny	CsaV3_3G009070

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAAACGGCGTCGTTGAAGCGATGCTAAAATAAAATTCCGTAAGAAAAAAAAGAAAAGAAAAAACCCCGGGAAACGCTGTCTTCCATTCCAACGAACACAACGGCGAACCACTCAGATAATGGAAGGCAAATGGCTTTCATCTCTCTCTCTCTCTCTCCACCCTCCATTTTTGTTCTCACAAAAAGCTCGACGAGTTCCTTTGAAATGGTCAACCAATCCCCCCCCCCCTTATTTTCCTCTGAAACAACCCATCTTCTCCGAAATTGGAGCAGATCCATCTTCTGGTTCACAGTTCTGAAATCCAACATTTCCTGATGTATAAATTTGCTTTTGTAGTTAATCCTTCGAAGCCTTCCATCTTGTCCAGTCGCATTGTTTATTAACTGATAGACGAGGCTTCGGACGGCTTGGGGTTTCAATTGCCCTGTTTTTCTTCGTTTCTGGGGGTGGTTTCTTTCTTTGCTCTTACTTTTTTTTGCTCTTTCTCCAAGTTCTTGCATCTCGGATCAAGAATTCTTGTAAAAGAGTAAATTCTTCATAATGGCTTTCACCGGAACGTTGGATAAATGCAAGGCTTGTGATAAGACTGTTTATGTCGTTGATTTGTTAACCCTTGAAGGGAATCCTTACCATAAGAATTGCTTTAAATGTAGCCACTGCAAAGGCACCCTTTCGGTTAGAAGTGTTCAATCTCTTTTAATTTATTTCAATTTGAAATCCAATTACTTGAATTTGGCGGATTTTATCCCAATTGTTTGTTTATGGCAGATGAGCAGCTACTCGTGGATGGATGGTGTTCTGTATTGCAAGACTCATTTCGAGCAGCTCTTTAAGGAATCTGGGAATTTCAGCAAGAACTTTCAAAGTAGTAGTACAACATTTCTTTTTTTGTTTCTTCCTTTTTACTTTTCCTTATTTTCTGACATTCTCTCCTTTCCATGGTTTTGTATGACAACAGCTAAATCTTCTGATAAGCCAAATGATCTGGTATGATCTCACTCTTTTCACTTTTCTTAGGCTAGGTCGGCTTCATTGTGACTAGCAATTTTATGTTGGATGTATCTGCAAAAGCTTGGTTGTTAATGTTAGGCCGATGCAAATTTCCGAATTCATATCTAAAGGTTATTAGGATAAAGTCAAATTTTGGATGCTTCATCCAATAATTTCTCCCCCAATTCATGGTTTTGAATATACTATTCCTAATATTTTTATAGAAACAATCTGGCCTGGGAATTCTTGCACCTTTATGATAGTGGTTTTGTTCCTTATTTTAAAGCTTGCTCTTGAGTCCAATGGGGTTATAATATGTCATGAGAATAGGAAGGGTTTAAAGTTCCTATGATGTCATTTTATCCTCATTTCATATTTGGTAGTTTATGTCTTAGGGTTCATGAATCAAATTTAACTTTAGGAATTTCAACATTGTGCTCTCCATGCAAATGCTGTAATTTTTGCATATTATTACAATTTTCATAACTTTTGATAGACAAGGACCCCCAGCAAACTGTCCTCCATGTTCTCTGGAACTCAAGATAAATGTTCTGTTTGCACCAAAACAGTTTATCCATTAGAGAAGGTATGTAGTTCTTCACCCCCTCCCCCTGCCTCCTATTTTGTATAATACATTTTTACAGTATTGTTAGTCTTTAAAATGTGAAAGAAACATTATTCTGCAGGGTTTTCTTTATTTGTTTGGAATGACTTTTTAAGTATTTATAAAAGTGTTTCTAAGTGGAAAAAAAAATGTTTTCAACATTTTAAATGATGAGGAGAATTGTAAGATATTTAGTTCTTAATTTCGATATTAATATTAGCTGATTTTAGGGTTGTGATAGAGAATGCTCCCTCATTTCTAAGGGATGGATTATTTTTCATGTTTGGCCATAGATTTGGCCTAATACTTAAATCTGCTACATCAAAATGTCATTTCAAATAGCTGATATATGGTTAGGAGAATTGAAACTGTATTATTTTTGTTTTTGGGAATAGGTCTCTTTGGAGGGGGAATGCTACCACAAGAAGTGCTTTAGATGTGCTCATGGTGGATGCCATTTGACACACTGTTCTTATGCTGCTCTTGATGGAGTCTTGTACTGCAAGCACCATTTTGCTCAGCTTTTCATGGTCAAAGGCAACTATAACCATGTCCTTGAAGCTGCAGCAAACAAGAAAACTACCACACCCCCAGCCGATCACACCGATGAAGATGCCGAGCCTTCACCTCGATCCGGGGAACAAGCGGTAGAGCAATCTTAAAATACCTTCTCTGCTCTACCAGCATTTGAGAATTCTTCTTCGCTTTATTCAACTTATAAAGAAAACAAAAATTATTCTGTTTCAAAAGAGAACCCATTTGTTTTTGTTCACATATTCACATTGGTTTGTTGTACTTGAAGACTCAAATTATGTGAGCTAGATAAACAGACCTTTCAAAGAATTGCACCATAGTTCTGTGTTGAATGAGAAGCTGGAATAAAAAGCAGATTTGGTGCAATTCCATATGGTCACCAAATATATTTTAGAAAAATATGATTTGATTGCATGAAACCTTAATCTCTCATAGTTTCTCACCCATACAATCTGACATAGCTTGATTACCATTTCAAATATTTCTCAACTCCACAATTGTTAAACACGAAAACTAATGTATGTATTGTGTTCTCGTTGGGAAAACTCTTAGATTCTCGACGTTTTTGATAGTTTGTTCAAATCCGGCTGCACACATATTGGATTAGGATCTGATGGAAATCGTATCATTGTCGACAAGGCTATGTTTGAACAACATAGATTCGTCGATCATTCA

mRNA sequence

ATGGCTTTCACCGGAACGTTGGATAAATGCAAGGCTTGTGATAAGACTGTTTATGTCGTTGATTTGTTAACCCTTGAAGGGAATCCTTACCATAAGAATTGCTTTAAATGTAGCCACTGCAAAGGCACCCTTTCGATGAGCAGCTACTCGTGGATGGATGGTGTTCTGTATTGCAAGACTCATTTCGAGCAGCTCTTTAAGGAATCTGGGAATTTCAGCAAGAACTTTCAAACTAAATCTTCTGATAAGCCAAATGATCTGACAAGGACCCCCAGCAAACTGTCCTCCATGTTCTCTGGAACTCAAGATAAATGTTCTGTTTGCACCAAAACAGTTTATCCATTAGAGAAGGTCTCTTTGGAGGGGGAATGCTACCACAAGAAGTGCTTTAGATGTGCTCATGGTGGATGCCATTTGACACACTGTTCTTATGCTGCTCTTGATGGAGTCTTGTACTGCAAGCACCATTTTGCTCAGCTTTTCATGGTCAAAGGCAACTATAACCATGTCCTTGAAGCTGCAGCAAACAAGAAAACTACCACACCCCCAGCCGATCACACCGATGAAGATGCCGAGCCTTCACCTCGATCCGGGGAACAAGCGGTAGAGCAATCTTAA

Coding sequence (CDS)

ATGGCTTTCACCGGAACGTTGGATAAATGCAAGGCTTGTGATAAGACTGTTTATGTCGTTGATTTGTTAACCCTTGAAGGGAATCCTTACCATAAGAATTGCTTTAAATGTAGCCACTGCAAAGGCACCCTTTCGATGAGCAGCTACTCGTGGATGGATGGTGTTCTGTATTGCAAGACTCATTTCGAGCAGCTCTTTAAGGAATCTGGGAATTTCAGCAAGAACTTTCAAACTAAATCTTCTGATAAGCCAAATGATCTGACAAGGACCCCCAGCAAACTGTCCTCCATGTTCTCTGGAACTCAAGATAAATGTTCTGTTTGCACCAAAACAGTTTATCCATTAGAGAAGGTCTCTTTGGAGGGGGAATGCTACCACAAGAAGTGCTTTAGATGTGCTCATGGTGGATGCCATTTGACACACTGTTCTTATGCTGCTCTTGATGGAGTCTTGTACTGCAAGCACCATTTTGCTCAGCTTTTCATGGTCAAAGGCAACTATAACCATGTCCTTGAAGCTGCAGCAAACAAGAAAACTACCACACCCCCAGCCGATCACACCGATGAAGATGCCGAGCCTTCACCTCGATCCGGGGAACAAGCGGTAGAGCAATCTTAA

Protein sequence

MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKTHFEQLFKESGNFSKNFQTKSSDKPNDLTRTPSKLSSMFSGTQDKCSVCTKTVYPLEKVSLEGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKTTTPPADHTDEDAEPSPRSGEQAVEQS*

Homology

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BLAST of CsaV3_3G009070 vs. NCBI nr
Match: XP_004133874.1 (LIM domain-containing protein PLIM2b [Cucumis sativus] >KGN56534.1 hypothetical protein Csa_011551 [Cucumis sativus])

HSP 1 Score: 436.0 bits (1120), Expect = 1.8e-118
Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTKSSDKPNDLTRTPSKLSSMFSGTQDKCSVCTKTVYPLEKVSL 120
           HFEQLFKESGNFSKNFQTKSSDKPNDLTRTPSKLSSMFSGTQDKCSVCTKTVYPLEKVSL
Sbjct: 61  HFEQLFKESGNFSKNFQTKSSDKPNDLTRTPSKLSSMFSGTQDKCSVCTKTVYPLEKVSL 120

Query: 121 EGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKTT 180
           EGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKTT
Sbjct: 121 EGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKTT 180

Query: 181 TPPADHTDEDAEPSPRSGEQAVEQS 206
           TPPADHTDEDAEPSPRSGEQAVEQS
Sbjct: 181 TPPADHTDEDAEPSPRSGEQAVEQS 205

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BLAST of CsaV3_3G009070 vs. NCBI nr
Match: XP_008438068.1 (PREDICTED: LIM domain-containing protein PLIM2b-like [Cucumis melo])

HSP 1 Score: 423.7 bits (1088), Expect = 9.1e-115
Identity = 198/205 (96.59%), Postives = 202/205 (98.54%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTKSSDKPNDLTRTPSKLSSMFSGTQDKCSVCTKTVYPLEKVSL 120
           HFEQLFKESGNFSKNFQTK S++ NDLTRTPSKLSSMF GTQDKCSVCTKTVYPLEKV+L
Sbjct: 61  HFEQLFKESGNFSKNFQTKPSERQNDLTRTPSKLSSMFCGTQDKCSVCTKTVYPLEKVTL 120

Query: 121 EGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKTT 180
           EGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKTT
Sbjct: 121 EGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKTT 180

Query: 181 TPPADHTDEDAEPSPRSGEQAVEQS 206
           TPPA+HTDEDAEPSPRSGEQAVEQS
Sbjct: 181 TPPAEHTDEDAEPSPRSGEQAVEQS 205

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BLAST of CsaV3_3G009070 vs. NCBI nr
Match: KAA0048980.1 (LIM domain-containing protein PLIM2b-like [Cucumis melo var. makuwa] >TYK17584.1 LIM domain-containing protein PLIM2b-like [Cucumis melo var. makuwa])

HSP 1 Score: 402.9 bits (1034), Expect = 1.7e-108
Identity = 192/209 (91.87%), Postives = 196/209 (93.78%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTKSSD----KPNDLTRTPSKLSSMFSGTQDKCSVCTKTVYPLE 120
           HFEQLFKESGNFSKNFQ+ S+      P     TPSKLSSMF GTQDKCSVCTKTVYPLE
Sbjct: 61  HFEQLFKESGNFSKNFQSSSTTILPISPIFFCLTPSKLSSMFCGTQDKCSVCTKTVYPLE 120

Query: 121 KVSLEGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAAN 180
           KV+LEGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAAN
Sbjct: 121 KVTLEGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAAN 180

Query: 181 KKTTTPPADHTDEDAEPSPRSGEQAVEQS 206
           KKTTTPPA+HTDEDAEPSPRSGEQAVEQS
Sbjct: 181 KKTTTPPAEHTDEDAEPSPRSGEQAVEQS 209

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BLAST of CsaV3_3G009070 vs. NCBI nr
Match: XP_038891791.1 (LIM domain-containing protein PLIM2b-like isoform X2 [Benincasa hispida])

HSP 1 Score: 401.4 bits (1030), Expect = 4.8e-108
Identity = 186/205 (90.73%), Postives = 197/205 (96.10%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MAFTGTLDKCKACDKTVYVVDLL+LEGNPYHK CFKCSHCKGTLSMSSYSWMDGVL+CKT
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKQCFKCSHCKGTLSMSSYSWMDGVLFCKT 60

Query: 61  HFEQLFKESGNFSKNFQTKSSDKPNDLTRTPSKLSSMFSGTQDKCSVCTKTVYPLEKVSL 120
           HFEQLFKESGNFSKNFQTK S+K ++LTRTPSKLSSMFSGTQDKC+VCTKTVYPLEKV+L
Sbjct: 61  HFEQLFKESGNFSKNFQTKPSEKQSELTRTPSKLSSMFSGTQDKCAVCTKTVYPLEKVTL 120

Query: 121 EGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKTT 180
           EGECYHK CFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKTT
Sbjct: 121 EGECYHKNCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKTT 180

Query: 181 TPPADHTDEDAEPSPRSGEQAVEQS 206
           TPPA+H +EDA+P P+S E AVEQS
Sbjct: 181 TPPAEHGEEDADPQPQSEEHAVEQS 205

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BLAST of CsaV3_3G009070 vs. NCBI nr
Match: XP_038891725.1 (LIM domain-containing protein PLIM2b-like isoform X1 [Benincasa hispida])

HSP 1 Score: 396.7 bits (1018), Expect = 1.2e-106
Identity = 186/206 (90.29%), Postives = 197/206 (95.63%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MAFTGTLDKCKACDKTVYVVDLL+LEGNPYHK CFKCSHCKGTLSMSSYSWMDGVL+CKT
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKQCFKCSHCKGTLSMSSYSWMDGVLFCKT 60

Query: 61  HFEQLFKESGNFSKNFQ-TKSSDKPNDLTRTPSKLSSMFSGTQDKCSVCTKTVYPLEKVS 120
           HFEQLFKESGNFSKNFQ TK S+K ++LTRTPSKLSSMFSGTQDKC+VCTKTVYPLEKV+
Sbjct: 61  HFEQLFKESGNFSKNFQSTKPSEKQSELTRTPSKLSSMFSGTQDKCAVCTKTVYPLEKVT 120

Query: 121 LEGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKT 180
           LEGECYHK CFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKT
Sbjct: 121 LEGECYHKNCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKT 180

Query: 181 TTPPADHTDEDAEPSPRSGEQAVEQS 206
           TTPPA+H +EDA+P P+S E AVEQS
Sbjct: 181 TTPPAEHGEEDADPQPQSEEHAVEQS 206

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BLAST of CsaV3_3G009070 vs. ExPASy Swiss-Prot
Match: Q1ECF5 (LIM domain-containing protein PLIM2b OS=Arabidopsis thaliana OX=3702 GN=PLIM2B PE=1 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 1.8e-81
Identity = 141/202 (69.80%), Postives = 165/202 (81.68%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           M+FTGTLDKC  CDKTVYVVD+L++EG PYHK+CF+C+HCKGTL MS+YS MDGVLYCKT
Sbjct: 1   MSFTGTLDKCNVCDKTVYVVDMLSIEGMPYHKSCFRCTHCKGTLQMSNYSSMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTKSSDKPNDLTRTPSKLSSMFSGTQDKCSVCTKTVYPLEKVSL 120
           HFEQLFKESGNFSKNFQ   ++KP +LTRTPSK+SS+F GTQDKC+ C KTVYPLEK+ +
Sbjct: 61  HFEQLFKESGNFSKNFQPGKTEKP-ELTRTPSKISSIFCGTQDKCAACEKTVYPLEKIQM 120

Query: 121 EGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKT- 180
           EGEC+HK CFRCAHGGC LTH SYA+LD VLYC+HHF QLFM KGNY HVL+AA +++T 
Sbjct: 121 EGECFHKTCFRCAHGGCTLTHSSYASLDSVLYCRHHFNQLFMEKGNYAHVLQAANHRRTA 180

Query: 181 ---TTPPADHTDEDAEPSPRSG 199
              T PP    D   E    +G
Sbjct: 181 SGNTLPPEPTEDVAVEAKEENG 201

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BLAST of CsaV3_3G009070 vs. ExPASy Swiss-Prot
Match: O80839 (LIM domain-containing protein PLIM2a OS=Arabidopsis thaliana OX=3702 GN=PLIM2A PE=1 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 1.2e-80
Identity = 145/207 (70.05%), Postives = 169/207 (81.64%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           M+FTGTLDKCKACDKTVYV+DLLTLEGN YHK+CF+C+HCKGTL +S+YS MDGVLYCK 
Sbjct: 1   MSFTGTLDKCKACDKTVYVMDLLTLEGNTYHKSCFRCTHCKGTLVISNYSSMDGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQTKSSDKPND-LTRTPSKLSSMFSGTQDKCSVCTKTVYPLEKVS 120
           HFEQLFKESGN+SKNFQ   ++KPND LTRTPSKLSS FSGTQDKC+ C KTVYPLEKV+
Sbjct: 61  HFEQLFKESGNYSKNFQAGKTEKPNDHLTRTPSKLSSFFSGTQDKCATCKKTVYPLEKVT 120

Query: 121 LEGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKT 180
           +EGE YHK CFRC H GC LTH SYA+L+GVLYCK HF QLF+ KG+YNHV +AAAN + 
Sbjct: 121 MEGESYHKTCFRCTHSGCPLTHSSYASLNGVLYCKVHFNQLFLEKGSYNHVHQAAANHRR 180

Query: 181 T------TPPA-DHTDEDAEPSPRSGE 200
           +      +PP+ DH  +D    P + E
Sbjct: 181 SASSGGASPPSDDHKPDDTASIPEAKE 207

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BLAST of CsaV3_3G009070 vs. ExPASy Swiss-Prot
Match: Q500W4 (LIM domain-containing protein PLIM2c OS=Arabidopsis thaliana OX=3702 GN=PLIM2C PE=1 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 1.5e-80
Identity = 142/207 (68.60%), Postives = 167/207 (80.68%), Query Frame = 0


Query: 2   AFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKTH 61
           AFTGT DKCKACDKTVYV+DL+TLEG PYHK+CF+CSHC GTL + +YS MDGVLYCKTH
Sbjct: 3   AFTGTTDKCKACDKTVYVMDLMTLEGMPYHKSCFRCSHCNGTLVICNYSSMDGVLYCKTH 62

Query: 62  FEQLFKESGNFSKNFQTK-SSDKPNDLTRTPSKLSSMFSGTQDKCSVCTKTVYPLEKVSL 121
           FEQLFKESGNFSKNFQT   ++K ND T+ P++LSS FSGTQDKC+ C KTVYPLEK+++
Sbjct: 63  FEQLFKESGNFSKNFQTAGKTEKSNDATKAPNRLSSFFSGTQDKCAACKKTVYPLEKMTM 122

Query: 122 EGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKTT 181
           EGE YHK CFRCAH GC LTH SYAALDGVLYCK HF+QLF+ KGNYNHVL+AAAN + +
Sbjct: 123 EGESYHKTCFRCAHSGCPLTHSSYAALDGVLYCKVHFSQLFLEKGNYNHVLQAAANHRRS 182

Query: 182 TPPADHT---DEDAEPSPRSGEQAVEQ 205
           T   D T   +++A P+      A  +
Sbjct: 183 TAEEDKTEPKEDEANPTEEETSDAAAE 209

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BLAST of CsaV3_3G009070 vs. ExPASy Swiss-Prot
Match: Q7F9R9 (LIM domain-containing protein PLIM2b OS=Oryza sativa subsp. japonica OX=39947 GN=PLIM2B PE=1 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 2.4e-70
Identity = 127/200 (63.50%), Postives = 145/200 (72.50%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           M+FTGT DKC ACDKTV+ +DLLT +G PYHK CFKCSHCKG LSM SYS MDGVLYCKT
Sbjct: 1   MSFTGTQDKCTACDKTVHFIDLLTADGVPYHKTCFKCSHCKGILSMCSYSSMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTKSSDKPNDLTRTPSKLSSMFSGTQDKCSVCTKTVYPLEKVSL 120
           HFEQLFKE+G+FSK F         +L R PSK+ S FSGTQDKC+ C KTVYPLEK++L
Sbjct: 61  HFEQLFKETGSFSKKFAPGCRSTDKELARAPSKICSAFSGTQDKCAACQKTVYPLEKLTL 120

Query: 121 EGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVL--------- 180
           EGE YHK CF+C+HGGC LT  SYAAL+GVLYCK HF QLFM KG+YNH+          
Sbjct: 121 EGESYHKSCFKCSHGGCILTTSSYAALNGVLYCKIHFGQLFMEKGSYNHMKKKSESQEVL 180

Query: 181 -EAAANKKTTTPPADHTDED 191
            E    ++   PP D   ED
Sbjct: 181 PEVVPEEQPAPPPPDENRED 200

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BLAST of CsaV3_3G009070 vs. ExPASy Swiss-Prot
Match: O04193 (LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana OX=3702 GN=WLIN2A PE=1 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 5.4e-70
Identity = 117/184 (63.59%), Postives = 154/184 (83.70%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           M+FTGT  KC+AC+KTVY V+LL+ +G  YHK CFKCSHCK  L +S+YS M+GV+YC+ 
Sbjct: 1   MSFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRP 60

Query: 61  HFEQLFKESGNFSKNFQTKS---SDKPN-DLTRTPSKLSSMFSGTQDKCSVCTKTVYPLE 120
           HFEQLFKESG+FSKNFQ+ +   +DKP  +L RTPS+L+ MFSGTQDKC+ CTKTVYP+E
Sbjct: 61  HFEQLFKESGSFSKNFQSPAKPLTDKPTPELNRTPSRLAGMFSGTQDKCATCTKTVYPIE 120

Query: 121 KVSLEGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAAN 180
           KV++E +CYHK CF+C+HGGC ++  +YAAL+G+LYCKHHFAQLF  KG+YNH++++A+ 
Sbjct: 121 KVTVESQCYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASI 180

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BLAST of CsaV3_3G009070 vs. ExPASy TrEMBL
Match: A0A0A0L6A8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G122580 PE=4 SV=1)

HSP 1 Score: 436.0 bits (1120), Expect = 8.5e-119
Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTKSSDKPNDLTRTPSKLSSMFSGTQDKCSVCTKTVYPLEKVSL 120
           HFEQLFKESGNFSKNFQTKSSDKPNDLTRTPSKLSSMFSGTQDKCSVCTKTVYPLEKVSL
Sbjct: 61  HFEQLFKESGNFSKNFQTKSSDKPNDLTRTPSKLSSMFSGTQDKCSVCTKTVYPLEKVSL 120

Query: 121 EGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKTT 180
           EGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKTT
Sbjct: 121 EGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKTT 180

Query: 181 TPPADHTDEDAEPSPRSGEQAVEQS 206
           TPPADHTDEDAEPSPRSGEQAVEQS
Sbjct: 181 TPPADHTDEDAEPSPRSGEQAVEQS 205

[Close]

BLAST of CsaV3_3G009070 vs. ExPASy TrEMBL
Match: A0A1S3AVG8 (LIM domain-containing protein PLIM2b-like OS=Cucumis melo OX=3656 GN=LOC103483289 PE=4 SV=1)

HSP 1 Score: 423.7 bits (1088), Expect = 4.4e-115
Identity = 198/205 (96.59%), Postives = 202/205 (98.54%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTKSSDKPNDLTRTPSKLSSMFSGTQDKCSVCTKTVYPLEKVSL 120
           HFEQLFKESGNFSKNFQTK S++ NDLTRTPSKLSSMF GTQDKCSVCTKTVYPLEKV+L
Sbjct: 61  HFEQLFKESGNFSKNFQTKPSERQNDLTRTPSKLSSMFCGTQDKCSVCTKTVYPLEKVTL 120

Query: 121 EGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKTT 180
           EGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKTT
Sbjct: 121 EGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKTT 180

Query: 181 TPPADHTDEDAEPSPRSGEQAVEQS 206
           TPPA+HTDEDAEPSPRSGEQAVEQS
Sbjct: 181 TPPAEHTDEDAEPSPRSGEQAVEQS 205

[Close]

BLAST of CsaV3_3G009070 vs. ExPASy TrEMBL
Match: A0A5D3D2N0 (LIM domain-containing protein PLIM2b-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G004540 PE=4 SV=1)

HSP 1 Score: 402.9 bits (1034), Expect = 8.0e-109
Identity = 192/209 (91.87%), Postives = 196/209 (93.78%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTKSSD----KPNDLTRTPSKLSSMFSGTQDKCSVCTKTVYPLE 120
           HFEQLFKESGNFSKNFQ+ S+      P     TPSKLSSMF GTQDKCSVCTKTVYPLE
Sbjct: 61  HFEQLFKESGNFSKNFQSSSTTILPISPIFFCLTPSKLSSMFCGTQDKCSVCTKTVYPLE 120

Query: 121 KVSLEGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAAN 180
           KV+LEGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAAN
Sbjct: 121 KVTLEGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAAN 180

Query: 181 KKTTTPPADHTDEDAEPSPRSGEQAVEQS 206
           KKTTTPPA+HTDEDAEPSPRSGEQAVEQS
Sbjct: 181 KKTTTPPAEHTDEDAEPSPRSGEQAVEQS 209

[Close]

BLAST of CsaV3_3G009070 vs. ExPASy TrEMBL
Match: A0A6J1IW81 (LIM domain-containing protein PLIM2b-like OS=Cucurbita maxima OX=3661 GN=LOC111479790 PE=4 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 2.0e-104
Identity = 182/205 (88.78%), Postives = 193/205 (94.15%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MAFTGTLDKCKACDKTVYVVDLL+LEG PYHK+CFKCSHCKGTLSMSSYSWMDGVLYCKT
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGIPYHKHCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTKSSDKPNDLTRTPSKLSSMFSGTQDKCSVCTKTVYPLEKVSL 120
           HFEQLFKESGNFSKNFQTK S+K ++LTRTPSKLS+MFSGTQDKCSVCTKTVYPLEKV+L
Sbjct: 61  HFEQLFKESGNFSKNFQTKPSEKQSELTRTPSKLSTMFSGTQDKCSVCTKTVYPLEKVTL 120

Query: 121 EGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKTT 180
           EGECYHK CFRCAHGGCHLTH SYAALDGVLYCKHHF+QLFMVKGNYNHVLEAAANKK T
Sbjct: 121 EGECYHKNCFRCAHGGCHLTHGSYAALDGVLYCKHHFSQLFMVKGNYNHVLEAAANKKNT 180

Query: 181 TPPADHTDEDAEPSPRSGEQAVEQS 206
           TPPAD  +EDAE  P+S + AVEQS
Sbjct: 181 TPPADRAEEDAESQPQSEDHAVEQS 205

[Close]

BLAST of CsaV3_3G009070 vs. ExPASy TrEMBL
Match: A0A6J1E9W7 (LIM domain-containing protein PLIM2c-like OS=Cucurbita moschata OX=3662 GN=LOC111432043 PE=4 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 3.5e-104
Identity = 182/205 (88.78%), Postives = 192/205 (93.66%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MAFTGTLDKCKACDKTVYVVDLL+LEG PYHK+CFKCSHCKGTLSMSSYSWMDGVLYCKT
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGIPYHKHCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTKSSDKPNDLTRTPSKLSSMFSGTQDKCSVCTKTVYPLEKVSL 120
           HFEQLFKESGNFSKNFQTK S+K ++LTRTPSKLSSMFSGTQDKCSVCTKTVYPLEKV+L
Sbjct: 61  HFEQLFKESGNFSKNFQTKPSEKQSELTRTPSKLSSMFSGTQDKCSVCTKTVYPLEKVTL 120

Query: 121 EGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKTT 180
           EGECYHK CFRCAHGGCHLTH SYAALDGVLYCKHHF+QLFMVKGNYNHVLEAAANKK  
Sbjct: 121 EGECYHKNCFRCAHGGCHLTHGSYAALDGVLYCKHHFSQLFMVKGNYNHVLEAAANKKNA 180

Query: 181 TPPADHTDEDAEPSPRSGEQAVEQS 206
           TPPAD  +EDAE  P+S + AVEQS
Sbjct: 181 TPPADRAEEDAESQPQSEDHAVEQS 205

[Close]

BLAST of CsaV3_3G009070 vs. TAIR 10
Match: AT1G01780.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 303.5 bits (776), Expect = 1.3e-82
Identity = 141/202 (69.80%), Postives = 165/202 (81.68%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           M+FTGTLDKC  CDKTVYVVD+L++EG PYHK+CF+C+HCKGTL MS+YS MDGVLYCKT
Sbjct: 1   MSFTGTLDKCNVCDKTVYVVDMLSIEGMPYHKSCFRCTHCKGTLQMSNYSSMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTKSSDKPNDLTRTPSKLSSMFSGTQDKCSVCTKTVYPLEKVSL 120
           HFEQLFKESGNFSKNFQ   ++KP +LTRTPSK+SS+F GTQDKC+ C KTVYPLEK+ +
Sbjct: 61  HFEQLFKESGNFSKNFQPGKTEKP-ELTRTPSKISSIFCGTQDKCAACEKTVYPLEKIQM 120

Query: 121 EGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKT- 180
           EGEC+HK CFRCAHGGC LTH SYA+LD VLYC+HHF QLFM KGNY HVL+AA +++T 
Sbjct: 121 EGECFHKTCFRCAHGGCTLTHSSYASLDSVLYCRHHFNQLFMEKGNYAHVLQAANHRRTA 180

Query: 181 ---TTPPADHTDEDAEPSPRSG 199
              T PP    D   E    +G
Sbjct: 181 SGNTLPPEPTEDVAVEAKEENG 201

[Close]

BLAST of CsaV3_3G009070 vs. TAIR 10
Match: AT2G45800.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 300.8 bits (769), Expect = 8.3e-82
Identity = 145/207 (70.05%), Postives = 169/207 (81.64%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           M+FTGTLDKCKACDKTVYV+DLLTLEGN YHK+CF+C+HCKGTL +S+YS MDGVLYCK 
Sbjct: 1   MSFTGTLDKCKACDKTVYVMDLLTLEGNTYHKSCFRCTHCKGTLVISNYSSMDGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQTKSSDKPND-LTRTPSKLSSMFSGTQDKCSVCTKTVYPLEKVS 120
           HFEQLFKESGN+SKNFQ   ++KPND LTRTPSKLSS FSGTQDKC+ C KTVYPLEKV+
Sbjct: 61  HFEQLFKESGNYSKNFQAGKTEKPNDHLTRTPSKLSSFFSGTQDKCATCKKTVYPLEKVT 120

Query: 121 LEGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKT 180
           +EGE YHK CFRC H GC LTH SYA+L+GVLYCK HF QLF+ KG+YNHV +AAAN + 
Sbjct: 121 MEGESYHKTCFRCTHSGCPLTHSSYASLNGVLYCKVHFNQLFLEKGSYNHVHQAAANHRR 180

Query: 181 T------TPPA-DHTDEDAEPSPRSGE 200
           +      +PP+ DH  +D    P + E
Sbjct: 181 SASSGGASPPSDDHKPDDTASIPEAKE 207

[Close]

BLAST of CsaV3_3G009070 vs. TAIR 10
Match: AT3G61230.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 300.4 bits (768), Expect = 1.1e-81
Identity = 142/207 (68.60%), Postives = 167/207 (80.68%), Query Frame = 0


Query: 2   AFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKTH 61
           AFTGT DKCKACDKTVYV+DL+TLEG PYHK+CF+CSHC GTL + +YS MDGVLYCKTH
Sbjct: 3   AFTGTTDKCKACDKTVYVMDLMTLEGMPYHKSCFRCSHCNGTLVICNYSSMDGVLYCKTH 62

Query: 62  FEQLFKESGNFSKNFQTK-SSDKPNDLTRTPSKLSSMFSGTQDKCSVCTKTVYPLEKVSL 121
           FEQLFKESGNFSKNFQT   ++K ND T+ P++LSS FSGTQDKC+ C KTVYPLEK+++
Sbjct: 63  FEQLFKESGNFSKNFQTAGKTEKSNDATKAPNRLSSFFSGTQDKCAACKKTVYPLEKMTM 122

Query: 122 EGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKTT 181
           EGE YHK CFRCAH GC LTH SYAALDGVLYCK HF+QLF+ KGNYNHVL+AAAN + +
Sbjct: 123 EGESYHKTCFRCAHSGCPLTHSSYAALDGVLYCKVHFSQLFLEKGNYNHVLQAAANHRRS 182

Query: 182 TPPADHT---DEDAEPSPRSGEQAVEQ 205
           T   D T   +++A P+      A  +
Sbjct: 183 TAEEDKTEPKEDEANPTEEETSDAAAE 209

[Close]

BLAST of CsaV3_3G009070 vs. TAIR 10
Match: AT2G39900.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 265.4 bits (677), Expect = 3.8e-71
Identity = 117/184 (63.59%), Postives = 154/184 (83.70%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           M+FTGT  KC+AC+KTVY V+LL+ +G  YHK CFKCSHCK  L +S+YS M+GV+YC+ 
Sbjct: 1   MSFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRP 60

Query: 61  HFEQLFKESGNFSKNFQTKS---SDKPN-DLTRTPSKLSSMFSGTQDKCSVCTKTVYPLE 120
           HFEQLFKESG+FSKNFQ+ +   +DKP  +L RTPS+L+ MFSGTQDKC+ CTKTVYP+E
Sbjct: 61  HFEQLFKESGSFSKNFQSPAKPLTDKPTPELNRTPSRLAGMFSGTQDKCATCTKTVYPIE 120

Query: 121 KVSLEGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAAN 180
           KV++E +CYHK CF+C+HGGC ++  +YAAL+G+LYCKHHFAQLF  KG+YNH++++A+ 
Sbjct: 121 KVTVESQCYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASI 180

[Close]

BLAST of CsaV3_3G009070 vs. TAIR 10
Match: AT3G55770.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 260.0 bits (663), Expect = 1.6e-69
Identity = 115/182 (63.19%), Postives = 154/182 (84.62%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           M+FTGT  KCKAC+KTVY V+LL+ +G  YHK+CFKC+HCK  L +SSYS M+GVLYCK 
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQT--KSSDKPN-DLTRTPSKLSSMFSGTQDKCSVCTKTVYPLEK 120
           HFEQLFKESG+F+KNFQ+  KS+DK   +LTRTPS+++  FSGTQ+KC+ C+KTVYP+EK
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEK 120

Query: 121 VSLEGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANK 180
           V++E + YHK CF+C+HGGC ++  +YAAL+G+LYCKHHFAQLF  KG+YNH++++A+ K
Sbjct: 121 VTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIK 180

The following BLAST results are available for this feature:

BLAST of CsaV3_3G009070 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004133874.1	1.8e-118	100.00	LIM domain-containing protein PLIM2b [Cucumis sativus] >KGN56534.1 hypothetical ...	[more]
XP_008438068.1	9.1e-115	96.59	PREDICTED: LIM domain-containing protein PLIM2b-like [Cucumis melo]	[more]
KAA0048980.1	1.7e-108	91.87	LIM domain-containing protein PLIM2b-like [Cucumis melo var. makuwa] >TYK17584.1...	[more]
XP_038891791.1	4.8e-108	90.73	LIM domain-containing protein PLIM2b-like isoform X2 [Benincasa hispida]	[more]
XP_038891725.1	1.2e-106	90.29	LIM domain-containing protein PLIM2b-like isoform X1 [Benincasa hispida]	[more]

BLAST of CsaV3_3G009070 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1ECF5	1.8e-81	69.80	LIM domain-containing protein PLIM2b OS=Arabidopsis thaliana OX=3702 GN=PLIM2B P...	[more]
O80839	1.2e-80	70.05	LIM domain-containing protein PLIM2a OS=Arabidopsis thaliana OX=3702 GN=PLIM2A P...	[more]
Q500W4	1.5e-80	68.60	LIM domain-containing protein PLIM2c OS=Arabidopsis thaliana OX=3702 GN=PLIM2C P...	[more]
Q7F9R9	2.4e-70	63.50	LIM domain-containing protein PLIM2b OS=Oryza sativa subsp. japonica OX=39947 GN...	[more]
O04193	5.4e-70	63.59	LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana OX=3702 GN=WLIN2A P...	[more]

BLAST of CsaV3_3G009070 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L6A8	8.5e-119	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G122580 PE=4 SV=1	[more]
A0A1S3AVG8	4.4e-115	96.59	LIM domain-containing protein PLIM2b-like OS=Cucumis melo OX=3656 GN=LOC10348328...	[more]
A0A5D3D2N0	8.0e-109	91.87	LIM domain-containing protein PLIM2b-like OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A6J1IW81	2.0e-104	88.78	LIM domain-containing protein PLIM2b-like OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A6J1E9W7	3.5e-104	88.78	LIM domain-containing protein PLIM2c-like OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]

BLAST of CsaV3_3G009070 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G01780.1	1.3e-82	69.80	GATA type zinc finger transcription factor family protein	[more]
AT2G45800.1	8.3e-82	70.05	GATA type zinc finger transcription factor family protein	[more]
AT3G61230.1	1.1e-81	68.60	GATA type zinc finger transcription factor family protein	[more]
AT2G39900.1	3.8e-71	63.59	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.1	1.6e-69	63.19	GATA type zinc finger transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001781	Zinc finger, LIM-type	SMART	SM00132	lim_4	coord: 9..61 e-value: 1.7E-12 score: 57.5 coord: 104..156 e-value: 1.9E-10 score: 50.7
IPR001781	Zinc finger, LIM-type	PFAM	PF00412	LIM	coord: 10..65 e-value: 9.0E-13 score: 48.2 coord: 105..160 e-value: 1.4E-8 score: 34.8
IPR001781	Zinc finger, LIM-type	PROSITE	PS00478	LIM_DOMAIN_1	coord: 10..44
IPR001781	Zinc finger, LIM-type	PROSITE	PS50023	LIM_DOMAIN_2	coord: 103..163 score: 11.9098
IPR001781	Zinc finger, LIM-type	PROSITE	PS50023	LIM_DOMAIN_2	coord: 8..68 score: 13.4839
None	No IPR available	GENE3D	2.10.110.10	Cysteine Rich Protein	coord: 99..169 e-value: 7.0E-17 score: 63.4 coord: 6..74 e-value: 7.5E-19 score: 69.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 176..205
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 182..196
None	No IPR available	PANTHER	PTHR24206	OS06G0237300 PROTEIN	coord: 1..197
None	No IPR available	PANTHER	PTHR24206:SF74	GATA TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY PROTEIN	coord: 1..197
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 36..76
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 2..35
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 131..170
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 97..130

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G009070.1	CsaV3_3G009070.1	mRNA