CsaV3_3G007740 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G007740
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Unknown protein
Location	chr3: 6769228 .. 6769384 (+)
RNA-Seq Expression	CsaV3_3G007740
Synteny	CsaV3_3G007740

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAAGACACGTGAAAAGAGAGCGCCCGTGTGGAAGGAAGGAGGACACGAAGAGAAAGGGAAGTGCCGACATGAGACTGAGGTGTCGTTCAATGAAGGGAAGAGGAGAACGACAAGTCGACAGGAGAAAGAGGGAAGAAAGAGGGGAGCTCAGTG

mRNA sequence

ATGAGAAGACACGTGAAAAGAGAGCGCCCGTGTGGAAGGAAGGAGGACACGAAGAGAAAGGGAAGTGCCGACATGAGACTGAGGTGTCGTTCAATGAAGGGAAGAGGAGAACGACAAGTCGACAGGAGAAAGAGGGAAGAAAGAGGGGAGCTCAGTG

Coding sequence (CDS)

ATGAGAAGACACGTGAAAAGAGAGCGCCCGTGTGGAAGGAAGGAGGACACGAAGAGAAAGGGAAGTGCCGACATGAGACTGAGGTGTCGTTCAATGAAGGGAAGAGGAGAACGACAAGTCGACAGGAGAAAGAGGGAAGAAAGAGGGGAGCTCAGTG

Protein sequence

MRRHVKRERPCGRKEDTKRKGSADMRLRCRSMKGRGERQVDRRKREERGELSX

Homology

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BLAST of CsaV3_3G007740 vs. NCBI nr
Match: KAE8650221.1 (hypothetical protein Csa_010916, partial [Cucumis sativus])

HSP 1 Score: 99.0 bits (245), Expect = 1.3e-17
Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 0


Query: 1  MRRHVKRERPCGRKEDTKRKGSADMRLRCRSMKGRGERQVDRRKREERGELS 53
          MRRHVKRERPCGRKEDTKRKGSADMRLRCRSMKGRGERQVDRRKREERGELS
Sbjct: 1  MRRHVKRERPCGRKEDTKRKGSADMRLRCRSMKGRGERQVDRRKREERGELS 52

The following BLAST results are available for this feature:

BLAST of CsaV3_3G007740 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8650221.1	1.3e-17	100.00	hypothetical protein Csa_010916, partial [Cucumis sativus]	[more]

BLAST of CsaV3_3G007740 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_3G007740 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_3G007740 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 9..52
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..52

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G007740.1	CsaV3_3G007740.1	mRNA