
CsaV3_3G007420 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TCGTAGGAACTCATCATATAATAATAATGATAATATATAAAGAAATAAAAATGTAAAGGAGTACGCGGAAATTGGTATATGGTGTACATCACAAATAAGGCATCCCGCGTGTACCTTACAGTGGTACTCTTTAAATAAAACTATATGTATATAATACAAAGCAAGTCGGCAGAGGAAGACAAGAGGGAAAGCGAAGGAGTTGAGGCTGGCAATACAAAGAAATGAGAGGTCCACCACACTCACACTCCATTCCCTTTCTATTTCCTCTCCGCCCATTCCGCCTCTATGCTCTTCTACGAAAGCGATTGCTCTACTCCAACCATGCACCCACCCCCAACACACTTCTCCCTCTCTCTCTCTCTATATATATAATCTCAATATCAATTCCTCTACTTATATTATCACAAGTCCTAAGTCCATGGATTTGAATCCCCCTCTCTGTTGTCTATGCGGCGACGTCGGTTTTCCAGCCAAGCTCTTCCGCTGCACCAATTGCTCCAACCGATTTCAGCACTCGTAAGACTCTCTCTCTCACACACACATATGCACACACCCTCTTCTTTATATATATTCTTTCGCTTTTGATTTCATCAACAACTCTCTAATAGCCTGTCAATTTTTCAGTTACTGTAGTAACTACTACTGCGGGGAATCGGGTGATGCAACAATTCGAGTATGTGATTGGTGCCGAAGTGAACAAAGAACCTGCCGTCCTGCCTTTGCAAGTACAACATCCCAAAAGAGTAACAAAATTACAGAAAGAAGAAGCTCTGCGGTGGGACTGCCTTCCCCTCGCCCTGCTCCACGCCGATACAAGCTTCTCAAAGATGTCATGTGTTAGATAACTTTACATTAAACCAACCAAAAATACCCTTTTTCATTTTTCATTCTCTTACTTACTTTACACACACACACATATATATCTTAATCTAATCTTGTATGTATGTGTGTGTGGCTCGATAAGATTGATGTGGCTCTCTGTAATTTATAATCTGAACTTTTAAATAACCTCGATCTCAAAAGTCTTGTGTGTATCTGGAAACTATATATATGATTTTATATGTTATTAAGAAGTAGAGTAATTTTACATGAAATCGATGTTTGATGCTTTGAAAACTAAACATGATTCCAAATGGTATAATGGCAATCATGTCCATAAATAAATAGAATGTTGTTTGCAATATATATAGATAAGGTAAATTTGTTAAAAGAAATGGTGAGGGAAAAATAGGAAGAAGAAGGGAAGTGAAAAAGGACATGCTAATGTACACGTGGAAACAGGTGGCTGACTGGCAGAAGTATCAGACTCCAATTCCAAAGACTCAAACTTGAAATTCGGATTCGATCCGTACAGAGCTTGCACGCCTTCCACGTCATCCACTTCCAAGTTCGCCTTCTTTTCCCTCGGCTTCAAACTTGGGTACATCACCGATTCCCTCACCGAGCTGTGACCCAACCCCAACAAATGACCAATCTCATGCGTCGCCACCGATTCTAAATCAACTGCCACCGCCGATTTCTCCTTCTCGAAATCCACCGCCCACGTCTCCGCCGCATCCAAGTGCAGCCTTCCAATCTCAGGGGAAAAAGAATGCGCTAAAACCCCCAACACGCCGTCGAACGCCTGTCCGTCACTATGATCGCCTCTGTAAAACCCAATTTTAATATCGGCGTATCCATAGTCGTCGGTCTCCTCAAAACTCACCGGAATCACATGGGCCCATTTCGAAAACGCCTTACGAAATACGGCTCTTACGTCTTCTAAACTCAAGTTGCTCATCCAATTATCCTTGAAGAATGCGTACGTCAGCACCATCGGCATTCGCCGCGTCCACCGTGGCTTTCCGGGAAAAAACACATAACGCTCCGTTGCATGGGGGTTATGCAGTGAAGAGGAATCTGACCGGAAAATCACCGCGGAAGTTGGGTTTTGAGGGAGTGTTGTTGGGTATGGAAGGCAGGACGGCGTACAGAGGAAGAAGAAGAGGAGCAATAGAAGGGGGAGAAACATGGCGGTGAGAGTGAGACCATCGGCATGCAAACAGTTGGAGAGAAATGGAAATTTATAGTTTGTTATATATATATATATATGAGAGAAAAGTAGAATTTTACAAATGGGTTGGTTTGTTTTATGGGATATTTGAAGTTAATATTAATCTCCTATTGTTGGCGTTGGATGTTCATGTTTCTCCTCTTTACTTAGAATTGAAAATAATTTTGACAAACACTGGTCGTTTGGTGTATCAACCATCACTTTTTCTATTATTTTATAAGTAAATATGTTCATTTTTCACCATCTTTATGCACATTTTTCATCATCCACATCAATAAAATAAAAATATACACATTCAAACTAAACAA ATGGATTTGAATCCCCCTCTCTGTTGTCTATGCGGCGACGTCGGTTTTCCAGCCAAGCTCTTCCGCTGCACCAATTGCTCCAACCGATTTCAGCACTCTTACTGTAGTAACTACTACTGCGGGGAATCGGGTGATGCAACAATTCGAGTATGTGATTGGTGCCGAAGTGAACAAAGAACCTGCCGTCCTGCCTTTGCAAGTACAACATCCCAAAAGAGTAACAAAATTACAGAAAGAAGAAGCTCTGCGGTGGGACTGCCTTCCCCTCGCCCTGCTCCACGCCGATACAAGCTTCTCAAAGATGTCATGTGTTAG ATGGATTTGAATCCCCCTCTCTGTTGTCTATGCGGCGACGTCGGTTTTCCAGCCAAGCTCTTCCGCTGCACCAATTGCTCCAACCGATTTCAGCACTCTTACTGTAGTAACTACTACTGCGGGGAATCGGGTGATGCAACAATTCGAGTATGTGATTGGTGCCGAAGTGAACAAAGAACCTGCCGTCCTGCCTTTGCAAGTACAACATCCCAAAAGAGTAACAAAATTACAGAAAGAAGAAGCTCTGCGGTGGGACTGCCTTCCCCTCGCCCTGCTCCACGCCGATACAAGCTTCTCAAAGATGTCATGTGTTAG MDLNPPLCCLCGDVGFPAKLFRCTNCSNRFQHSYCSNYYCGESGDATIRVCDWCRSEQRTCRPAFASTTSQKSNKITERRSSAVGLPSPRPAPRRYKLLKDVMC* Homology
BLAST of CsaV3_3G007420 vs. NCBI nr
Match: XP_004134287.1 (uncharacterized protein LOC101222685 [Cucumis sativus] >KGN56359.1 hypothetical protein Csa_010459 [Cucumis sativus]) HSP 1 Score: 228.0 bits (580), Expect = 3.7e-56 Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0
BLAST of CsaV3_3G007420 vs. NCBI nr
Match: XP_008437789.1 (PREDICTED: uncharacterized protein LOC103483122 [Cucumis melo]) HSP 1 Score: 201.1 bits (510), Expect = 4.9e-48 Identity = 95/105 (90.48%), Postives = 96/105 (91.43%), Query Frame = 0
BLAST of CsaV3_3G007420 vs. NCBI nr
Match: KAA0048831.1 (uncharacterized protein E6C27_scaffold171G00440 [Cucumis melo var. makuwa] >TYK20783.1 uncharacterized protein E5676_scaffold291G00440 [Cucumis melo var. makuwa]) HSP 1 Score: 201.1 bits (510), Expect = 4.9e-48 Identity = 95/105 (90.48%), Postives = 96/105 (91.43%), Query Frame = 0
BLAST of CsaV3_3G007420 vs. NCBI nr
Match: XP_038904003.1 (uncharacterized protein LOC120090420 [Benincasa hispida]) HSP 1 Score: 185.7 bits (470), Expect = 2.1e-43 Identity = 86/108 (79.63%), Postives = 92/108 (85.19%), Query Frame = 0
BLAST of CsaV3_3G007420 vs. NCBI nr
Match: XP_022924678.1 (uncharacterized protein LOC111432109 [Cucurbita moschata]) HSP 1 Score: 171.8 bits (434), Expect = 3.2e-39 Identity = 82/112 (73.21%), Postives = 90/112 (80.36%), Query Frame = 0
BLAST of CsaV3_3G007420 vs. ExPASy TrEMBL
Match: A0A0A0L5P1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G117940 PE=4 SV=1) HSP 1 Score: 228.0 bits (580), Expect = 1.8e-56 Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0
BLAST of CsaV3_3G007420 vs. ExPASy TrEMBL
Match: A0A5D3DB67 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00440 PE=4 SV=1) HSP 1 Score: 201.1 bits (510), Expect = 2.4e-48 Identity = 95/105 (90.48%), Postives = 96/105 (91.43%), Query Frame = 0
BLAST of CsaV3_3G007420 vs. ExPASy TrEMBL
Match: A0A1S3AVF1 (uncharacterized protein LOC103483122 OS=Cucumis melo OX=3656 GN=LOC103483122 PE=4 SV=1) HSP 1 Score: 201.1 bits (510), Expect = 2.4e-48 Identity = 95/105 (90.48%), Postives = 96/105 (91.43%), Query Frame = 0
BLAST of CsaV3_3G007420 vs. ExPASy TrEMBL
Match: A0A6J1ED69 (uncharacterized protein LOC111432109 OS=Cucurbita moschata OX=3662 GN=LOC111432109 PE=4 SV=1) HSP 1 Score: 171.8 bits (434), Expect = 1.5e-39 Identity = 82/112 (73.21%), Postives = 90/112 (80.36%), Query Frame = 0
BLAST of CsaV3_3G007420 vs. ExPASy TrEMBL
Match: A0A6J1IAU2 (uncharacterized protein LOC111472884 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111472884 PE=4 SV=1) HSP 1 Score: 137.1 bits (344), Expect = 4.2e-29 Identity = 69/104 (66.35%), Postives = 79/104 (75.96%), Query Frame = 0
BLAST of CsaV3_3G007420 vs. TAIR 10
Match: AT3G60520.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G02070.1); Has 107 Blast hits to 107 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 107; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 107.5 bits (267), Expect = 6.8e-24 Identity = 60/130 (46.15%), Postives = 77/130 (59.23%), Query Frame = 0
BLAST of CsaV3_3G007420 vs. TAIR 10
Match: AT1G02070.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G60520.1); Has 98 Blast hits to 98 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 88.2 bits (217), Expect = 4.3e-18 Identity = 54/130 (41.54%), Postives = 66/130 (50.77%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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