CsaV3_3G007320 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G007320
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	UvrABC system protein C
Location	chr3: 6512680 .. 6513830 (-)
RNA-Seq Expression	CsaV3_3G007320
Synteny	CsaV3_3G007320

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAGATTTTAGTTTAATTTAATCAGAAAGGGAAATGGATGGGGCCATACACCATCATAAGCAGAGCAAAGGTCAGGATAATACAGAATTTGGAATTGTTTATTTAGAAAGGAAAGCAAAGGATGGATTGTTGTATGAGGTGAGGTGAGGTGAGGGGTTCCCTCTTAATTCAACGCTGCTTCTATTTGAATAACTAAAACCTCCTCTGCTCAAAATCAATATGCGTCCTTCCATCTCAATGCTTACCTTTGTATGTAAAATAGTAAATTCTAAATCGTAAGTCTCAGAGGGTGGACTAATGGGAAATTGCATGTTGAAAGGAGCAGGTGCAGGAGCAAGAGAAGAAGAAGTAAACAAAATTGTGAAAGTAGTGACGGTTGGTGGGGGAATCATGGAGTTGTATACGCCAATAACGGCGGAGTGTATTACCGGTGAATATCCAGGGCATGCCATTTTCAAGACCCGAAGCATATTCTCGGATGCGCTGCACCATAAAGAGGAGCTTGAGGGTGGCCAAGTCTACTATCTCCTTCCCCTCAACCAATACATTCCCAACCATAACCACAGTGTATTATCCACGCCCTATCGAATGTCCACCGCCGAATCCCAAACCAAGCCAGATCATGTAATGTTTCCAAAGTACAACAACGCCGGTGTGTGGAAGGTCAACTTGGTGATTTGCCCACAACAACTTTCACAAATTTTGTCTCAAAATAATCGCACTCAGGAGTTGATTGACAACGTCAGGACCGTAGCCAAGTGTGGAAACGCCCTCGAATCTGCTTCCAACTCGGACCATTCCAGCGTTGCAGGTAGTTGGAAGGATAAGCCCCACTATGGATTCAAATGATTTGTTTTCCTTTTTATGTCCTTTCCCTTACTTTGTAACATATTAGATTTCATTAGTTGCTCTCTCTCTCTCTCAGATGATCTTATAGATCATTTTGGTTTGTGTTTTAGCAATTCGAAATTCCTTAATTAGTACCAACGCAACTATAAGAAGAAAGGCCCAGGACTGGTCCAACTTTGTAAATAATTAATGTTCTATATTGATATGCATTAAAATGAAGGAAGTTCAAAGCGCTTGTACCAAAAAAGAAAAAACAATTAATTTGGTTTGATCCTAATGAACAAGAGTGAAGTTGAGTGGGC

mRNA sequence

ATGGGAAATTGCATGTTGAAAGGAGCAGGTGCAGGAGCAAGAGAAGAAGAAGTAAACAAAATTGTGAAAGTAGTGACGGTTGGTGGGGGAATCATGGAGTTGTATACGCCAATAACGGCGGAGTGTATTACCGGTGAATATCCAGGGCATGCCATTTTCAAGACCCGAAGCATATTCTCGGATGCGCTGCACCATAAAGAGGAGCTTGAGGGTGGCCAAGTCTACTATCTCCTTCCCCTCAACCAATACATTCCCAACCATAACCACAGTGTATTATCCACGCCCTATCGAATGTCCACCGCCGAATCCCAAACCAAGCCAGATCATGTAATGTTTCCAAAGTACAACAACGCCGGTGTGTGGAAGGTCAACTTGGTGATTTGCCCACAACAACTTTCACAAATTTTGTCTCAAAATAATCGCACTCAGGAGTTGATTGACAACGTCAGGACCGTAGCCAAGTGTGGAAACGCCCTCGAATCTGCTTCCAACTCGGACCATTCCAGCGTTGCAGGTAGTTGGAAGGATAAGCCCCACTATGGATTCAAATGA

Coding sequence (CDS)

ATGGGAAATTGCATGTTGAAAGGAGCAGGTGCAGGAGCAAGAGAAGAAGAAGTAAACAAAATTGTGAAAGTAGTGACGGTTGGTGGGGGAATCATGGAGTTGTATACGCCAATAACGGCGGAGTGTATTACCGGTGAATATCCAGGGCATGCCATTTTCAAGACCCGAAGCATATTCTCGGATGCGCTGCACCATAAAGAGGAGCTTGAGGGTGGCCAAGTCTACTATCTCCTTCCCCTCAACCAATACATTCCCAACCATAACCACAGTGTATTATCCACGCCCTATCGAATGTCCACCGCCGAATCCCAAACCAAGCCAGATCATGTAATGTTTCCAAAGTACAACAACGCCGGTGTGTGGAAGGTCAACTTGGTGATTTGCCCACAACAACTTTCACAAATTTTGTCTCAAAATAATCGCACTCAGGAGTTGATTGACAACGTCAGGACCGTAGCCAAGTGTGGAAACGCCCTCGAATCTGCTTCCAACTCGGACCATTCCAGCGTTGCAGGTAGTTGGAAGGATAAGCCCCACTATGGATTCAAATGA

Protein sequence

MGNCMLKGAGAGAREEEVNKIVKVVTVGGGIMELYTPITAECITGEYPGHAIFKTRSIFSDALHHKEELEGGQVYYLLPLNQYIPNHNHSVLSTPYRMSTAESQTKPDHVMFPKYNNAGVWKVNLVICPQQLSQILSQNNRTQELIDNVRTVAKCGNALESASNSDHSSVAGSWKDKPHYGFK*

Homology

[Close]

BLAST of CsaV3_3G007320 vs. NCBI nr
Match: XP_011650622.1 (uncharacterized protein LOC105434805 [Cucumis sativus] >KGN56348.1 hypothetical protein Csa_011596 [Cucumis sativus])

HSP 1 Score: 378.6 bits (971), Expect = 3.0e-101
Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0


Query: 1   MGNCMLKGAGAGAREEEVNKIVKVVTVGGGIMELYTPITAECITGEYPGHAIFKTRSIFS 60
           MGNCMLKGAGAGAREEEVNKIVKVVTVGGGIMELYTPITAECITGEYPGHAIFKTRSIFS
Sbjct: 1   MGNCMLKGAGAGAREEEVNKIVKVVTVGGGIMELYTPITAECITGEYPGHAIFKTRSIFS 60

Query: 61  DALHHKEELEGGQVYYLLPLNQYIPNHNHSVLSTPYRMSTAESQTKPDHVMFPKYNNAGV 120
           DALHHKEELEGGQVYYLLPLNQYIPNHNHSVLSTPYRMSTAESQTKPDHVMFPKYNNAGV
Sbjct: 61  DALHHKEELEGGQVYYLLPLNQYIPNHNHSVLSTPYRMSTAESQTKPDHVMFPKYNNAGV 120

Query: 121 WKVNLVICPQQLSQILSQNNRTQELIDNVRTVAKCGNALESASNSDHSSVAGSWKDKPHY 180
           WKVNLVICPQQLSQILSQNNRTQELIDNVRTVAKCGNALESASNSDHSSVAGSWKDKPHY
Sbjct: 121 WKVNLVICPQQLSQILSQNNRTQELIDNVRTVAKCGNALESASNSDHSSVAGSWKDKPHY 180

Query: 181 GFK 184
           GFK
Sbjct: 181 GFK 183

[Close]

BLAST of CsaV3_3G007320 vs. NCBI nr
Match: XP_016898947.1 (PREDICTED: uncharacterized protein LOC107990386 [Cucumis melo] >KAA0048819.1 uncharacterized protein E6C27_scaffold171G00320 [Cucumis melo var. makuwa] >TYK20772.1 uncharacterized protein E5676_scaffold291G00320 [Cucumis melo var. makuwa])

HSP 1 Score: 364.8 bits (935), Expect = 4.5e-97
Identity = 174/183 (95.08%), Postives = 181/183 (98.91%), Query Frame = 0


Query: 1   MGNCMLKGAGAGAREEEVNKIVKVVTVGGGIMELYTPITAECITGEYPGHAIFKTRSIFS 60
           MGNC+LKGAGAG RE EVNK+VKVVTVGGGIMELYTPITAECITGEYPGHAIFK+RSIFS
Sbjct: 1   MGNCILKGAGAGGREAEVNKMVKVVTVGGGIMELYTPITAECITGEYPGHAIFKSRSIFS 60

Query: 61  DALHHKEELEGGQVYYLLPLNQYIPNHNHSVLSTPYRMSTAESQTKPDHVMFPKYNNAGV 120
           +ALHHKEELEGGQVYYLLPLNQY+PNHNHSVLSTPYRMSTAESQTKPDHV+FPKYNNAGV
Sbjct: 61  EALHHKEELEGGQVYYLLPLNQYMPNHNHSVLSTPYRMSTAESQTKPDHVLFPKYNNAGV 120

Query: 121 WKVNLVICPQQLSQILSQNNRTQELIDNVRTVAKCGNALESASNSDHSSVAGSWKDKPHY 180
           WKVNLVICPQQLSQILSQ+NRTQELIDNVRTVAKCGNALESASNSDHSSVAGSWKDKPHY
Sbjct: 121 WKVNLVICPQQLSQILSQHNRTQELIDNVRTVAKCGNALESASNSDHSSVAGSWKDKPHY 180

Query: 181 GFK 184
           GFK
Sbjct: 181 GFK 183

[Close]

BLAST of CsaV3_3G007320 vs. NCBI nr
Match: XP_023540170.1 (uncharacterized protein LOC111800623 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 240.7 bits (613), Expect = 9.7e-60
Identity = 130/200 (65.00%), Postives = 150/200 (75.00%), Query Frame = 0


Query: 1   MGNCMLKGAGAGAREEEVNKIVKVVTVGGGIMELYTPITAECITGEYPGHAIFKTRSIFS 60
           MGNC+LK AG     E V+ +VKVVTV GGIMELY PITAECITGEYPGHAIF +RSIFS
Sbjct: 9   MGNCVLKVAG-----ERVD-VVKVVTVDGGIMELYAPITAECITGEYPGHAIFTSRSIFS 68

Query: 61  DALHHKEELEGGQVYYLLPLNQYIPNHN-----HSVLSTPYRMSTAESQ--------TKP 120
           + L HK+EL  GQVYYLLPLN Y P+        SV+STPYRMST ESQ         + 
Sbjct: 69  EPLLHKDELHAGQVYYLLPLNPYKPSAKIEADAPSVVSTPYRMSTCESQNAVAKKRAAEG 128

Query: 121 DHVMFPKYNNAGVWKVNLVICPQQLSQILSQNNRTQELIDNVRTVAKCGNALESASNSDH 180
           +  +FPKY++ GVWKV LVICP+QLS+IL Q NRT+ELI+NVRTVAKCGN + SA++SDH
Sbjct: 129 EAEVFPKYSSTGVWKVKLVICPEQLSEILKQGNRTEELIENVRTVAKCGNGVGSAASSDH 188

Query: 181 SSVAGSWK----DKPHYGFK 184
           SSVAGSWK    DKP YG K
Sbjct: 189 SSVAGSWKGSAMDKPQYGLK 202

[Close]

BLAST of CsaV3_3G007320 vs. NCBI nr
Match: KAG7028490.1 (hypothetical protein SDJN02_09671, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 240.0 bits (611), Expect = 1.7e-59
Identity = 129/200 (64.50%), Postives = 148/200 (74.00%), Query Frame = 0


Query: 1   MGNCMLKGAGAGAREEEVNKIVKVVTVGGGIMELYTPITAECITGEYPGHAIFKTRSIFS 60
           MGNC+LK AG      E   +VKVVTV GGIMELY PITAECITGEYPGHAIFK+RSIFS
Sbjct: 44  MGNCVLKVAG------ERGDVVKVVTVDGGIMELYAPITAECITGEYPGHAIFKSRSIFS 103

Query: 61  DALHHKEELEGGQVYYLLPLNQYIPNHN-----HSVLSTPYRMSTAESQ--------TKP 120
           + L HK+EL  GQVYYLLPLN Y P+        SV+STPYRMST ESQ         + 
Sbjct: 104 EPLLHKDELHAGQVYYLLPLNPYKPSAKIEADAPSVVSTPYRMSTCESQNAVAKKRAAEG 163

Query: 121 DHVMFPKYNNAGVWKVNLVICPQQLSQILSQNNRTQELIDNVRTVAKCGNALESASNSDH 180
           +  +FPKY++ GVWKV LVICP+QLS+IL Q NRT+ELI+NVRTVAKCGN + SA++SDH
Sbjct: 164 EAEVFPKYSSTGVWKVKLVICPEQLSEILKQGNRTEELIENVRTVAKCGNGVGSAASSDH 223

Query: 181 SSVAGSWK----DKPHYGFK 184
           SSVAGSWK    DK  YG K
Sbjct: 224 SSVAGSWKGSAMDKLQYGLK 237

[Close]

BLAST of CsaV3_3G007320 vs. NCBI nr
Match: XP_022974256.1 (uncharacterized protein LOC111472889 [Cucurbita maxima])

HSP 1 Score: 238.8 bits (608), Expect = 3.7e-59
Identity = 130/200 (65.00%), Postives = 150/200 (75.00%), Query Frame = 0


Query: 1   MGNCMLKGAGAGAREEEVNKIVKVVTVGGGIMELYTPITAECITGEYPGHAIFKTRSIFS 60
           MGNC+LK AG     E V+ +VKVVTV GGIMELY PITAECITGEYPGHAIFK+RSIFS
Sbjct: 9   MGNCVLKVAG-----ERVD-VVKVVTVDGGIMELYAPITAECITGEYPGHAIFKSRSIFS 68

Query: 61  DALHHKEELEGGQVYYLLPLNQYIPNHN-----HSVLSTPYRMSTAESQ--------TKP 120
           + L HK+EL  GQVYYLLPLN Y P+        SV+STPYRMST ESQ         + 
Sbjct: 69  EPLLHKDELHEGQVYYLLPLNPYKPSAKIEADAPSVVSTPYRMSTCESQNAVAKKRAAEA 128

Query: 121 DHVMFPKYNNAGVWKVNLVICPQQLSQILSQNNRTQELIDNVRTVAKCGNALESASNSDH 180
           +  +FPKY++ GVWKV LVICP+QLS+IL Q NRT+ELI+NVRTVAKCGN + SA++SDH
Sbjct: 129 EAEVFPKYSSTGVWKVKLVICPEQLSEILKQGNRTEELIENVRTVAKCGNGVGSAASSDH 188

Query: 181 SSVAGSWK----DKPHYGFK 184
           SSVAGSWK    DK  YG K
Sbjct: 189 SSVAGSWKGSAMDKLQYGLK 202

[Close]

BLAST of CsaV3_3G007320 vs. ExPASy TrEMBL
Match: A0A0A0L3K9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G116850 PE=4 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 1.4e-101
Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0


Query: 1   MGNCMLKGAGAGAREEEVNKIVKVVTVGGGIMELYTPITAECITGEYPGHAIFKTRSIFS 60
           MGNCMLKGAGAGAREEEVNKIVKVVTVGGGIMELYTPITAECITGEYPGHAIFKTRSIFS
Sbjct: 1   MGNCMLKGAGAGAREEEVNKIVKVVTVGGGIMELYTPITAECITGEYPGHAIFKTRSIFS 60

Query: 61  DALHHKEELEGGQVYYLLPLNQYIPNHNHSVLSTPYRMSTAESQTKPDHVMFPKYNNAGV 120
           DALHHKEELEGGQVYYLLPLNQYIPNHNHSVLSTPYRMSTAESQTKPDHVMFPKYNNAGV
Sbjct: 61  DALHHKEELEGGQVYYLLPLNQYIPNHNHSVLSTPYRMSTAESQTKPDHVMFPKYNNAGV 120

Query: 121 WKVNLVICPQQLSQILSQNNRTQELIDNVRTVAKCGNALESASNSDHSSVAGSWKDKPHY 180
           WKVNLVICPQQLSQILSQNNRTQELIDNVRTVAKCGNALESASNSDHSSVAGSWKDKPHY
Sbjct: 121 WKVNLVICPQQLSQILSQNNRTQELIDNVRTVAKCGNALESASNSDHSSVAGSWKDKPHY 180

Query: 181 GFK 184
           GFK
Sbjct: 181 GFK 183

[Close]

BLAST of CsaV3_3G007320 vs. ExPASy TrEMBL
Match: A0A5D3DB01 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00320 PE=4 SV=1)

HSP 1 Score: 364.8 bits (935), Expect = 2.2e-97
Identity = 174/183 (95.08%), Postives = 181/183 (98.91%), Query Frame = 0


Query: 1   MGNCMLKGAGAGAREEEVNKIVKVVTVGGGIMELYTPITAECITGEYPGHAIFKTRSIFS 60
           MGNC+LKGAGAG RE EVNK+VKVVTVGGGIMELYTPITAECITGEYPGHAIFK+RSIFS
Sbjct: 1   MGNCILKGAGAGGREAEVNKMVKVVTVGGGIMELYTPITAECITGEYPGHAIFKSRSIFS 60

Query: 61  DALHHKEELEGGQVYYLLPLNQYIPNHNHSVLSTPYRMSTAESQTKPDHVMFPKYNNAGV 120
           +ALHHKEELEGGQVYYLLPLNQY+PNHNHSVLSTPYRMSTAESQTKPDHV+FPKYNNAGV
Sbjct: 61  EALHHKEELEGGQVYYLLPLNQYMPNHNHSVLSTPYRMSTAESQTKPDHVLFPKYNNAGV 120

Query: 121 WKVNLVICPQQLSQILSQNNRTQELIDNVRTVAKCGNALESASNSDHSSVAGSWKDKPHY 180
           WKVNLVICPQQLSQILSQ+NRTQELIDNVRTVAKCGNALESASNSDHSSVAGSWKDKPHY
Sbjct: 121 WKVNLVICPQQLSQILSQHNRTQELIDNVRTVAKCGNALESASNSDHSSVAGSWKDKPHY 180

Query: 181 GFK 184
           GFK
Sbjct: 181 GFK 183

[Close]

BLAST of CsaV3_3G007320 vs. ExPASy TrEMBL
Match: A0A1S4DSH2 (uncharacterized protein LOC107990386 OS=Cucumis melo OX=3656 GN=LOC107990386 PE=4 SV=1)

HSP 1 Score: 364.8 bits (935), Expect = 2.2e-97
Identity = 174/183 (95.08%), Postives = 181/183 (98.91%), Query Frame = 0


Query: 1   MGNCMLKGAGAGAREEEVNKIVKVVTVGGGIMELYTPITAECITGEYPGHAIFKTRSIFS 60
           MGNC+LKGAGAG RE EVNK+VKVVTVGGGIMELYTPITAECITGEYPGHAIFK+RSIFS
Sbjct: 1   MGNCILKGAGAGGREAEVNKMVKVVTVGGGIMELYTPITAECITGEYPGHAIFKSRSIFS 60

Query: 61  DALHHKEELEGGQVYYLLPLNQYIPNHNHSVLSTPYRMSTAESQTKPDHVMFPKYNNAGV 120
           +ALHHKEELEGGQVYYLLPLNQY+PNHNHSVLSTPYRMSTAESQTKPDHV+FPKYNNAGV
Sbjct: 61  EALHHKEELEGGQVYYLLPLNQYMPNHNHSVLSTPYRMSTAESQTKPDHVLFPKYNNAGV 120

Query: 121 WKVNLVICPQQLSQILSQNNRTQELIDNVRTVAKCGNALESASNSDHSSVAGSWKDKPHY 180
           WKVNLVICPQQLSQILSQ+NRTQELIDNVRTVAKCGNALESASNSDHSSVAGSWKDKPHY
Sbjct: 121 WKVNLVICPQQLSQILSQHNRTQELIDNVRTVAKCGNALESASNSDHSSVAGSWKDKPHY 180

Query: 181 GFK 184
           GFK
Sbjct: 181 GFK 183

[Close]

BLAST of CsaV3_3G007320 vs. ExPASy TrEMBL
Match: A0A6J1IAU7 (uncharacterized protein LOC111472889 OS=Cucurbita maxima OX=3661 GN=LOC111472889 PE=4 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 1.8e-59
Identity = 130/200 (65.00%), Postives = 150/200 (75.00%), Query Frame = 0


Query: 1   MGNCMLKGAGAGAREEEVNKIVKVVTVGGGIMELYTPITAECITGEYPGHAIFKTRSIFS 60
           MGNC+LK AG     E V+ +VKVVTV GGIMELY PITAECITGEYPGHAIFK+RSIFS
Sbjct: 9   MGNCVLKVAG-----ERVD-VVKVVTVDGGIMELYAPITAECITGEYPGHAIFKSRSIFS 68

Query: 61  DALHHKEELEGGQVYYLLPLNQYIPNHN-----HSVLSTPYRMSTAESQ--------TKP 120
           + L HK+EL  GQVYYLLPLN Y P+        SV+STPYRMST ESQ         + 
Sbjct: 69  EPLLHKDELHEGQVYYLLPLNPYKPSAKIEADAPSVVSTPYRMSTCESQNAVAKKRAAEA 128

Query: 121 DHVMFPKYNNAGVWKVNLVICPQQLSQILSQNNRTQELIDNVRTVAKCGNALESASNSDH 180
           +  +FPKY++ GVWKV LVICP+QLS+IL Q NRT+ELI+NVRTVAKCGN + SA++SDH
Sbjct: 129 EAEVFPKYSSTGVWKVKLVICPEQLSEILKQGNRTEELIENVRTVAKCGNGVGSAASSDH 188

Query: 181 SSVAGSWK----DKPHYGFK 184
           SSVAGSWK    DK  YG K
Sbjct: 189 SSVAGSWKGSAMDKLQYGLK 202

[Close]

BLAST of CsaV3_3G007320 vs. ExPASy TrEMBL
Match: A0A6J1IIP8 (uncharacterized protein LOC111474379 OS=Cucurbita maxima OX=3661 GN=LOC111474379 PE=4 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 2.3e-59
Identity = 130/200 (65.00%), Postives = 150/200 (75.00%), Query Frame = 0


Query: 1   MGNCMLKGAGAGAREEEVNKIVKVVTVGGGIMELYTPITAECITGEYPGHAIFKTRSIFS 60
           MGNC+LK AG     E V+ +VKVVTV GGIMELY PITAECITGEYPGHAIFK+RSIFS
Sbjct: 9   MGNCVLKVAG-----ERVD-VVKVVTVDGGIMELYAPITAECITGEYPGHAIFKSRSIFS 68

Query: 61  DALHHKEELEGGQVYYLLPLNQYIPNHN-----HSVLSTPYRMSTAESQ--------TKP 120
           + L HK+EL  GQVYYLLPLN Y P+        SV+STPYRMST ESQ         + 
Sbjct: 69  EPLLHKDELHEGQVYYLLPLNPYKPSAKIEADAPSVVSTPYRMSTCESQNAVAKKRAAEG 128

Query: 121 DHVMFPKYNNAGVWKVNLVICPQQLSQILSQNNRTQELIDNVRTVAKCGNALESASNSDH 180
           +  +FPKY++ GVWKV LVICP+QLS+IL Q NRT+ELI+NVRTVAKCGN + SA++SDH
Sbjct: 129 EAEVFPKYSSTGVWKVKLVICPEQLSEILKQGNRTEELIENVRTVAKCGNGVGSAASSDH 188

Query: 181 SSVAGSWK----DKPHYGFK 184
           SSVAGSWK    DK  YG K
Sbjct: 189 SSVAGSWKGSAMDKLQYGLK 202

[Close]

BLAST of CsaV3_3G007320 vs. TAIR 10
Match: AT3G61920.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot, hypocotyl, root, egg cell; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64700.1); Has 77 Blast hits to 77 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 77; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 132.1 bits (331), Expect = 4.5e-31
Identity = 84/190 (44.21%), Postives = 114/190 (60.00%), Query Frame = 0


Query: 1   MGNCMLKGAGAGARE--EEVNKIVKVVTVGGGIMELYTPITAECITGEYPGHAIFKTRSI 60
           MGNC+ KG G G+R+  ++ + ++KVVT  GG+MEL+ PI AE IT E+PGH I  + S+
Sbjct: 1   MGNCVFKGNG-GSRKLYDKDDSLIKVVTPNGGVMELHPPIFAEFITNEFPGHVIHDSLSL 60

Query: 61  --FSDALHHKEELEGGQVYYLLPLNQYIPN----HNHSVLSTPYRMSTAESQTKPDHVMF 120
              S  L H EEL  G +YYLLPL+          +   LSTPYRMS      K   +  
Sbjct: 61  RHSSPPLLHGEELFPGNIYYLLPLSSSAAATAQLDSSDQLSTPYRMSFG----KTPIMAA 120

Query: 121 PKYNNAGVWKVNLVICPQQLSQILSQNNRTQELIDNVRTVAK-----CGNALESASNSDH 178
                 GVWKV LVI P+QL++IL+++  T+ L+++VRTVAK     CG  + S +NSD 
Sbjct: 121 LSGGGCGVWKVRLVISPEQLAEILAEDVETEALVESVRTVAKCGGYGCGGGVHSRANSDQ 180

[Close]

BLAST of CsaV3_3G007320 vs. TAIR 10
Match: AT1G64700.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G61920.1); Has 48 Blast hits to 47 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 94.4 bits (233), Expect = 1.0e-19
Identity = 64/200 (32.00%), Postives = 101/200 (50.50%), Query Frame = 0


Query: 1   MGNCMLKGAGAGAREEEVNKIVKVVTVGGGIMELYTPITAECITGEYPGHAIFKTRSIFS 60
           MGNC+  G G    +EE + ++KV+   GG++E Y+P+TA  ++  + GHA+F    +  
Sbjct: 1   MGNCLFGGLG----DEEEDLLIKVIKSDGGVLEFYSPVTAGFVSHGFSGHALFSAVDLLW 60

Query: 61  DALHHKEELEGGQVYYLLP----------------------LNQYIP-----NHNHSVLS 120
             L H   L  GQ YYL P                      L+   P     ++NH VL 
Sbjct: 61  KPLAHDHLLVPGQSYYLFPNIVSDELKTFVGSCHVRSNSESLSAITPYRMSLDYNHRVLK 120

Query: 121 TPY-----RMSTAESQTKPDHVMFPKYNNAG-VWKVNLVICPQQLSQILSQNNRTQELID 168
             Y     R S   ++ K       + ++ G +WKVNL+I  ++L QILS++ RT ELI+
Sbjct: 121 RSYTDVFSRNSHIRTRQKEKKTRRRRTSSKGAIWKVNLIINTEELLQILSEDGRTNELIE 180

The following BLAST results are available for this feature:

BLAST of CsaV3_3G007320 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011650622.1	3.0e-101	100.00	uncharacterized protein LOC105434805 [Cucumis sativus] >KGN56348.1 hypothetical ...	[more]
XP_016898947.1	4.5e-97	95.08	PREDICTED: uncharacterized protein LOC107990386 [Cucumis melo] >KAA0048819.1 unc...	[more]
XP_023540170.1	9.7e-60	65.00	uncharacterized protein LOC111800623 [Cucurbita pepo subsp. pepo]	[more]
KAG7028490.1	1.7e-59	64.50	hypothetical protein SDJN02_09671, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022974256.1	3.7e-59	65.00	uncharacterized protein LOC111472889 [Cucurbita maxima]	[more]

BLAST of CsaV3_3G007320 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_3G007320 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L3K9	1.4e-101	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G116850 PE=4 SV=1	[more]
A0A5D3DB01	2.2e-97	95.08	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S4DSH2	2.2e-97	95.08	uncharacterized protein LOC107990386 OS=Cucumis melo OX=3656 GN=LOC107990386 PE=...	[more]
A0A6J1IAU7	1.8e-59	65.00	uncharacterized protein LOC111472889 OS=Cucurbita maxima OX=3661 GN=LOC111472889...	[more]
A0A6J1IIP8	2.3e-59	65.00	uncharacterized protein LOC111474379 OS=Cucurbita maxima OX=3661 GN=LOC111474379...	[more]

BLAST of CsaV3_3G007320 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G61920.1	4.5e-31	44.21	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT1G64700.1	1.0e-19	32.00	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025322	Protein of unknown function DUF4228, plant	PFAM	PF14009	DUF4228	coord: 1..163 e-value: 2.2E-20 score: 73.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 160..183
None	No IPR available	PANTHER	PTHR33148:SF41	DUF4228 DOMAIN PROTEIN	coord: 1..172
None	No IPR available	PANTHER	PTHR33148	PLASTID MOVEMENT IMPAIRED PROTEIN-RELATED	coord: 1..172

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G007320.1	CsaV3_3G007320.1	mRNA