CsaV3_3G007150 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G007150
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr3: 6423043 .. 6423318 (-)
RNA-Seq ExpressionCsaV3_3G007150
SyntenyCsaV3_3G007150
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATAAAAATGAGATTAAGGAGGATAGGGTTTTAGGAAGTAAGAAGGGACGATGAAGAAGGAAAAGGTTGAATATATGTGGTGATTGGGATGAGTGTGTTCGTTTGTGTGGCCGAAATTAAGGACGAGGTGGTTGGTTGTTGACGGTGAAGGGAATAAGATTCGTTGAGAGAGACGAAATTAAGGGAGCTGGGGAAAGGTGGTTTGTTTGGGGAATCATAGCTAGAGAGAGAGAGGGTGGGTTTGGGGAGCAACCAAAAAGCAGAGTCTCATGA

mRNA sequence

ATGGATAAAAATGAGATTAAGGAGGATAGGGTTTTAGGAAGACGAGGTGGTTGGTTGTTGACGGTGAAGGGAATAAGATTCGTTGAGAGAGACGAAATTAAGGGAGCTGGGGAAAGGTGGTTTGTTTGGGGAATCATAGCTAGAGAGAGAGAGGGTGGGTTTGGGGAGCAACCAAAAAGCAGAGTCTCATGA

Coding sequence (CDS)

ATGGATAAAAATGAGATTAAGGAGGATAGGGTTTTAGGAAGACGAGGTGGTTGGTTGTTGACGGTGAAGGGAATAAGATTCGTTGAGAGAGACGAAATTAAGGGAGCTGGGGAAAGGTGGTTTGTTTGGGGAATCATAGCTAGAGAGAGAGAGGGTGGGTTTGGGGAGCAACCAAAAAGCAGAGTCTCATGA

Protein sequence

MDKNEIKEDRVLGRRGGWLLTVKGIRFVERDEIKGAGERWFVWGIIAREREGGFGEQPKSRVS*
Homology
[Close]
BLAST of CsaV3_3G007150 vs. NCBI nr
Match: KGN56332.1 (hypothetical protein Csa_010797 [Cucumis sativus])

HSP 1 Score: 136.0 bits (341), Expect = 1.2e-28
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0 

Query: 1  MDKNEIKEDRVLGRRGGWLLTVKGIRFVERDEIKGAGERWFVWGIIAREREGGFGEQPKS 60
          MDKNEIKEDRVLGRRGGWLLTVKGIRFVERDEIKGAGERWFVWGIIAREREGGFGEQPKS
Sbjct: 1  MDKNEIKEDRVLGRRGGWLLTVKGIRFVERDEIKGAGERWFVWGIIAREREGGFGEQPKS 60

Query: 61 RVS 64
          RVS
Sbjct: 61 RVS 63

[Close]
BLAST of CsaV3_3G007150 vs. ExPASy TrEMBL
Match: A0A0A0L6W6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G116690 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 5.7e-29
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0 

Query: 1  MDKNEIKEDRVLGRRGGWLLTVKGIRFVERDEIKGAGERWFVWGIIAREREGGFGEQPKS 60
          MDKNEIKEDRVLGRRGGWLLTVKGIRFVERDEIKGAGERWFVWGIIAREREGGFGEQPKS
Sbjct: 1  MDKNEIKEDRVLGRRGGWLLTVKGIRFVERDEIKGAGERWFVWGIIAREREGGFGEQPKS 60

Query: 61 RVS 64
          RVS
Sbjct: 61 RVS 63

The following BLAST results are available for this feature:
BLAST of CsaV3_3G007150 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN56332.11.2e-28100.00hypothetical protein Csa_010797 [Cucumis sativus][more]
BLAST of CsaV3_3G007150 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_3G007150 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L6W65.7e-29100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G116690 PE=4 SV=1[more]
BLAST of CsaV3_3G007150 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G007150.1CsaV3_3G007150.1mRNA