CsaV3_3G006960 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G006960
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	dof zinc finger protein DOF5.7
Location	chr3: 6249523 .. 6250340 (-)
RNA-Seq Expression	CsaV3_3G006960
Synteny	CsaV3_3G006960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAACTCATTGGAAGAAGAAATAAGGCAAAAATCATCAAGTGGAAGAAGAAAAGAAAACAAAAATGGAGATAATTGTGAAGATCAAGAACTATTAGGAGGTGTAAAGTGTCCAAGATGTGATTCCACCAACACCAAATTTTGCTATTACAATAACTATAGTCTCACACAGCCTCGCCATTTTTGCAAGACTTGCCGGAGATATTGGACTAAAGGTGGAGCCTTAAGAAATGTCCCTATCGGCGGCGGTTGTCGGAAAACCAAGAAGCTAAAATCTTCTTCTTCTTCATCTTCCTCCGCTAAATTCTTCACCGGAATAATCCCACCACTTCCAGTACCGCCGCCCTCTGTTGATTTTGGTGGCACTGGGGGAGGAGGAGGTTCTTGTTTGTCTCTTGCATCTTCAATTGAATCTTTGAGCTCTTTAAACCAAGACCTTCATTGGAAATTACAACAACAACGTTTGGCTATGATTCTTGGAGATCATGAACAACCACCACCACAAAACAAGGTTCAAAATCACAACTTTTTTCAACCTATTTTGTTTCACAATCTACATCATCAAGATTCACCGGCTACTACGACTACTATAACGACTGCGACTACTACTGATCAATGGTTGTTTCCAACTCAACTAAGTGCTCCAAACAACGGAGCTTCGAGATCAATTAATGATGGGCATGGTGGGTGGAATAATAATAATAGTAACGATGATCATAATATTGGAGTTGAGGGTTGGGAGGATTTGCATCATTTCACTGCCTTCCCCTGAAGGTAGATCAGACCACAACATTTCTATCATGCGTAGGGGAATAA

mRNA sequence

ATGAAGAACTCATTGGAAGAAGAAATAAGGCAAAAATCATCAAGTGGAAGAAGAAAAGAAAACAAAAATGGAGATAATTGTGAAGATCAAGAACTATTAGGAGGTGTAAAGTGTCCAAGATGTGATTCCACCAACACCAAATTTTGCTATTACAATAACTATAGTCTCACACAGCCTCGCCATTTTTGCAAGACTTGCCGGAGATATTGGACTAAAGGTGGAGCCTTAAGAAATGTCCCTATCGGCGGCGGTTGTCGGAAAACCAAGAAGCTAAAATCTTCTTCTTCTTCATCTTCCTCCGCTAAATTCTTCACCGGAATAATCCCACCACTTCCAGTACCGCCGCCCTCTGTTGATTTTGGTGGCACTGGGGGAGGAGGAGGTTCTTGTTTGTCTCTTGCATCTTCAATTGAATCTTTGAGCTCTTTAAACCAAGACCTTCATTGGAAATTACAACAACAACGTTTGGCTATGATTCTTGGAGATCATGAACAACCACCACCACAAAACAAGGTAGATCAGACCACAACATTTCTATCATGCGTAGGGGAATAA

Coding sequence (CDS)

ATGAAGAACTCATTGGAAGAAGAAATAAGGCAAAAATCATCAAGTGGAAGAAGAAAAGAAAACAAAAATGGAGATAATTGTGAAGATCAAGAACTATTAGGAGGTGTAAAGTGTCCAAGATGTGATTCCACCAACACCAAATTTTGCTATTACAATAACTATAGTCTCACACAGCCTCGCCATTTTTGCAAGACTTGCCGGAGATATTGGACTAAAGGTGGAGCCTTAAGAAATGTCCCTATCGGCGGCGGTTGTCGGAAAACCAAGAAGCTAAAATCTTCTTCTTCTTCATCTTCCTCCGCTAAATTCTTCACCGGAATAATCCCACCACTTCCAGTACCGCCGCCCTCTGTTGATTTTGGTGGCACTGGGGGAGGAGGAGGTTCTTGTTTGTCTCTTGCATCTTCAATTGAATCTTTGAGCTCTTTAAACCAAGACCTTCATTGGAAATTACAACAACAACGTTTGGCTATGATTCTTGGAGATCATGAACAACCACCACCACAAAACAAGGTAGATCAGACCACAACATTTCTATCATGCGTAGGGGAATAA

Protein sequence

MKNSLEEEIRQKSSSGRRKENKNGDNCEDQELLGGVKCPRCDSTNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKTKKLKSSSSSSSSAKFFTGIIPPLPVPPPSVDFGGTGGGGGSCLSLASSIESLSSLNQDLHWKLQQQRLAMILGDHEQPPPQNKVDQTTTFLSCVGE*

Homology

[Close]

BLAST of CsaV3_3G006960 vs. NCBI nr
Match: KAE8650202.1 (hypothetical protein Csa_010714 [Cucumis sativus])

HSP 1 Score: 378.6 bits (971), Expect = 3.0e-101
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0


Query: 1   MKNSLEEEIRQKSSSGRRKENKNGDNCEDQELLGGVKCPRCDSTNTKFCYYNNYSLTQPR 60
           MKNSLEEEIRQKSSSGRRKENKNGDNCEDQELLGGVKCPRCDSTNTKFCYYNNYSLTQPR
Sbjct: 1   MKNSLEEEIRQKSSSGRRKENKNGDNCEDQELLGGVKCPRCDSTNTKFCYYNNYSLTQPR 60

Query: 61  HFCKTCRRYWTKGGALRNVPIGGGCRKTKKLKSSSSSSSSAKFFTGIIPPLPVPPPSVDF 120
           HFCKTCRRYWTKGGALRNVPIGGGCRKTKKLKSSSSSSSSAKFFTGIIPPLPVPPPSVDF
Sbjct: 61  HFCKTCRRYWTKGGALRNVPIGGGCRKTKKLKSSSSSSSSAKFFTGIIPPLPVPPPSVDF 120

Query: 121 GGTGGGGGSCLSLASSIESLSSLNQDLHWKLQQQRLAMILGDHEQPPPQNKVDQTTTFLS 180
           GGTGGGGGSCLSLASSIESLSSLNQDLHWKLQQQRLAMILGDHEQPPPQNKVDQTTTFLS
Sbjct: 121 GGTGGGGGSCLSLASSIESLSSLNQDLHWKLQQQRLAMILGDHEQPPPQNKVDQTTTFLS 180

Query: 181 CVGE 185
           CVGE
Sbjct: 181 CVGE 184

[Close]

BLAST of CsaV3_3G006960 vs. NCBI nr
Match: XP_004134269.1 (dof zinc finger protein DOF5.7 [Cucumis sativus])

HSP 1 Score: 353.6 bits (906), Expect = 1.0e-93
Identity = 173/178 (97.19%), Postives = 173/178 (97.19%), Query Frame = 0


Query: 1   MKNSLEEEIRQKSSSGRRKENKNGDNCEDQELLGGVKCPRCDSTNTKFCYYNNYSLTQPR 60
           MKNSLEEEIRQKSSSGRRKENKNGDNCEDQELLGGVKCPRCDSTNTKFCYYNNYSLTQPR
Sbjct: 1   MKNSLEEEIRQKSSSGRRKENKNGDNCEDQELLGGVKCPRCDSTNTKFCYYNNYSLTQPR 60

Query: 61  HFCKTCRRYWTKGGALRNVPIGGGCRKTKKLKSSSSSSSSAKFFTGIIPPLPVPPPSVDF 120
           HFCKTCRRYWTKGGALRNVPIGGGCRKTKKLKSSSSSSSSAKFFTGIIPPLPVPPPSVDF
Sbjct: 61  HFCKTCRRYWTKGGALRNVPIGGGCRKTKKLKSSSSSSSSAKFFTGIIPPLPVPPPSVDF 120

Query: 121 GGTGGGGGSCLSLASSIESLSSLNQDLHWKLQQQRLAMILGDHEQPPPQNKVDQTTTF 179
           GGTGGGGGSCLSLASSIESLSSLNQDLHWKLQQQRLAMILGDHEQPPPQNKV     F
Sbjct: 121 GGTGGGGGSCLSLASSIESLSSLNQDLHWKLQQQRLAMILGDHEQPPPQNKVQNHNFF 178

[Close]

BLAST of CsaV3_3G006960 vs. NCBI nr
Match: XP_008450228.1 (PREDICTED: dof zinc finger protein DOF5.7 [Cucumis melo])

HSP 1 Score: 318.5 bits (815), Expect = 3.7e-83
Identity = 163/181 (90.06%), Postives = 167/181 (92.27%), Query Frame = 0


Query: 1   MKNSLEEEIRQKSSSGRRKENKNGDNCEDQELLGGVKCPRCDSTNTKFCYYNNYSLTQPR 60
           MKNSLEEEIRQKSS+GRRKENKNGDNCE +ELLG +KCPRCDSTNTKFCYYNNYSLTQPR
Sbjct: 1   MKNSLEEEIRQKSSTGRRKENKNGDNCE-EELLGSIKCPRCDSTNTKFCYYNNYSLTQPR 60

Query: 61  HFCKTCRRYWTKGGALRNVPIGGGCRKTKKLKSSSSSSSSAKFFTGIIPPLPVPPPSVDF 120
           HFCKTCRRYWTKGGALRNVPIGGGCRKTKKLKSSSSSSSSAKFFTGIIPP PVPPPSVDF
Sbjct: 61  HFCKTCRRYWTKGGALRNVPIGGGCRKTKKLKSSSSSSSSAKFFTGIIPPPPVPPPSVDF 120

Query: 121 GGT-GGGGGSCLSLASSIESLSSLNQDLHWKLQQQRLAMILGDHE--QPPPQNKVDQTTT 179
           GG  GGGGGSCLSLASSIESLSSLNQDLHWKLQQQRLAMILGD+E  Q  PQNKV     
Sbjct: 121 GGIGGGGGGSCLSLASSIESLSSLNQDLHWKLQQQRLAMILGDNEQQQQQPQNKVQNHNF 180

[Close]

BLAST of CsaV3_3G006960 vs. NCBI nr
Match: XP_038905316.1 (dof zinc finger protein DOF4.7-like [Benincasa hispida])

HSP 1 Score: 248.8 bits (634), Expect = 3.6e-62
Identity = 133/176 (75.57%), Postives = 143/176 (81.25%), Query Frame = 0


Query: 1   MKNSLEEEIRQKSSSGRRKENKNGDNCE-DQELLGGVKCPRCDSTNTKFCYYNNYSLTQP 60
           MK S EEEIRQKSSS RRK N + +N + D++    ++CPRCDSTNTKFCYYNNYSLTQP
Sbjct: 1   MKTSFEEEIRQKSSSARRKGNNSNNNQDYDKKESAALRCPRCDSTNTKFCYYNNYSLTQP 60

Query: 61  RHFCKTCRRYWTKGGALRNVPIGGGCRKTKKLK--SSSSSSSSAKFFTGIIPPLPVPPPS 120
           RHFCKTCRRYWT+GGALRNVP+GGGCRKTKKLK  SSSSSSSSAKFFTGI     +PPPS
Sbjct: 61  RHFCKTCRRYWTEGGALRNVPVGGGCRKTKKLKSSSSSSSSSSAKFFTGI---SSLPPPS 120

Query: 121 VDFGGTGGGGGSCLSLASSIESLSSLNQDLHWKLQQQRLAMILGDHEQPPPQNKVD 174
           VDFG    GGGS L LASSIESLSSLNQDLHWKLQQQR AMI GDHEQ   Q   D
Sbjct: 121 VDFGAI--GGGSSLHLASSIESLSSLNQDLHWKLQQQRFAMIFGDHEQQQQQQNKD 171

[Close]

BLAST of CsaV3_3G006960 vs. NCBI nr
Match: XP_023552947.1 (dof zinc finger protein DOF5.7-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 184.1 bits (466), Expect = 1.1e-42
Identity = 99/161 (61.49%), Postives = 108/161 (67.08%), Query Frame = 0


Query: 36  VKCPRCDSTNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKTKKLKSSS 95
           +KCPRC+STNTKFCYYNNY+LTQPRHFCKTCRRYWTKGGALRN+PIGGGCRK KKLKSSS
Sbjct: 24  LKCPRCNSTNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNIPIGGGCRKNKKLKSSS 83

Query: 96  SSSSSAKFFTGIIPPLPVPPPSVDFGGTGGGGG----SCLS------------------- 155
           S+S+   F TGI        PS+DF   G GG     SC S                   
Sbjct: 84  SNSN---FLTGI-------SPSIDFSAIGSGGSLFPCSCFSLGQTPATIPAANYSSMGLY 143

Query: 156 --------LASSIESLSSLNQDLHWKLQQQRLAMILGDHEQ 166
                   LASSIESLS LNQDLHW+LQQQRL MI GDH+Q
Sbjct: 144 NLNDNTQQLASSIESLSYLNQDLHWRLQQQRLGMIYGDHDQ 174

[Close]

BLAST of CsaV3_3G006960 vs. ExPASy Swiss-Prot
Match: Q9LSL6 (Dof zinc finger protein DOF5.7 OS=Arabidopsis thaliana OX=3702 GN=DOF5.7 PE=2 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.1e-34
Identity = 93/220 (42.27%), Postives = 118/220 (53.64%), Query Frame = 0


Query: 13  SSSGRRKENKNGDNCEDQELLGGVKCPRCDSTNTKFCYYNNYSLTQPRHFCKTCRRYWTK 72
           S + + K+  +    +DQ+    +KCPRC+S NTKFCYYNNYSL+QPRHFCK+CRRYWT+
Sbjct: 21  SGTSQTKKPPSSSVAQDQQ---NLKCPRCNSPNTKFCYYNNYSLSQPRHFCKSCRRYWTR 80

Query: 73  GGALRNVPIGGGCRKTKK-------LKSSSSSSSSAKFFTGIIPPLP--VPPPS------ 132
           GGALRNVPIGGGCRKTKK       + +  SSSSS +FF+ I+       PPP+      
Sbjct: 81  GGALRNVPIGGGCRKTKKSIKPNSSMNTLPSSSSSQRFFSSIMEDSSKFFPPPTTMDFQL 140

Query: 133 ----------------------------------VDFG------------------GTGG 166
                                             VD G                  G   
Sbjct: 141 AGLSLNKMNDLQLLNNQEVLDLRPMMSSGRENTPVDVGSGLSLMGFGDFNNNHSPTGFTT 200

[Close]

BLAST of CsaV3_3G006960 vs. ExPASy Swiss-Prot
Match: Q84K52 (Dof zinc finger protein DOF4.7 OS=Arabidopsis thaliana OX=3702 GN=DOF4.7 PE=1 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 6.4e-30
Identity = 77/141 (54.61%), Postives = 86/141 (60.99%), Query Frame = 0


Query: 36  VKCPRCDSTNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKTKKLKSSS 95
           +KCPRCDS NTKFCYYNNYSL+QPRH+CK CRRYWT+GGALRNVPIGG  R   K  S  
Sbjct: 41  LKCPRCDSVNTKFCYYNNYSLSQPRHYCKNCRRYWTRGGALRNVPIGGSTRNKNKPCSLQ 100

Query: 96  SSSSSAKFFTGIIPPLPV-----PPPSVDFGGTGGGGGSCLSL-------ASSIESLSSL 155
             SS   F  G            P  ++    +GG  G    L       +SSIESLSS 
Sbjct: 101 VISSPPLFSNGTSSASRELVRNHPSTAMMMMSSGGFSGYMFPLDPNFNLASSSIESLSSF 160

Query: 156 NQDLHWKLQQQRL--AMILGD 163
           NQDLH KLQQQRL  +M L D
Sbjct: 161 NQDLHQKLQQQRLVTSMFLQD 181

[Close]

BLAST of CsaV3_3G006960 vs. ExPASy Swiss-Prot
Match: Q9ZV33 (Dof zinc finger protein DOF2.2 OS=Arabidopsis thaliana OX=3702 GN=DOF2.2 PE=2 SV=2)

HSP 1 Score: 126.7 bits (317), Expect = 2.7e-28
Identity = 53/68 (77.94%), Postives = 61/68 (89.71%), Query Frame = 0


Query: 34  GGVKCPRCDSTNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKTKKLKS 93
           G +KCPRCDS NTKFCY+NNY+LTQPRHFCK CRRYWT+GGALRNVP+GGGCR+ KK KS
Sbjct: 92  GALKCPRCDSANTKFCYFNNYNLTQPRHFCKACRRYWTRGGALRNVPVGGGCRRNKKGKS 151

Query: 94  SSSSSSSA 102
            +S SSS+
Sbjct: 152 GNSKSSSS 159

[Close]

BLAST of CsaV3_3G006960 vs. ExPASy Swiss-Prot
Match: Q6Z345 (Dof zinc finger protein 4 OS=Oryza sativa subsp. japonica OX=39947 GN=DOF4 PE=2 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 2.7e-28
Identity = 53/65 (81.54%), Postives = 62/65 (95.38%), Query Frame = 0


Query: 36  VKCPRCDSTNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKTKKLKSSS 95
           VKCPRC+STNTKFCYYNNY+L+QPRHFCK+CRRYWTKGG LRNVP+GGGCRKTK+  SSS
Sbjct: 45  VKCPRCESTNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGCRKTKRSGSSS 104

Query: 96  SSSSS 101
           ++SS+
Sbjct: 105 AASSA 109

[Close]

BLAST of CsaV3_3G006960 vs. ExPASy Swiss-Prot
Match: Q8L9V6 (Dof zinc finger protein DOF1.1 OS=Arabidopsis thaliana OX=3702 GN=DOF1.1 PE=1 SV=2)

HSP 1 Score: 124.4 bits (311), Expect = 1.3e-27
Identity = 56/76 (73.68%), Postives = 63/76 (82.89%), Query Frame = 0


Query: 32  LLGGVKCPRCDSTNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKTKK- 91
           L G +KCPRCDS+NTKFCYYNNY+LTQPRHFCK CRRYWT+GGALRNVP+GGGCR+  K 
Sbjct: 73  LAGPLKCPRCDSSNTKFCYYNNYNLTQPRHFCKGCRRYWTQGGALRNVPVGGGCRRNNKK 132

Query: 92  -----LKSSSSSSSSA 102
                LKSSSSSS  +
Sbjct: 133 GKNGNLKSSSSSSKQS 148

[Close]

BLAST of CsaV3_3G006960 vs. ExPASy TrEMBL
Match: A0A0A0L2T9 (Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G115040 PE=4 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 5.0e-94
Identity = 173/178 (97.19%), Postives = 173/178 (97.19%), Query Frame = 0


Query: 1   MKNSLEEEIRQKSSSGRRKENKNGDNCEDQELLGGVKCPRCDSTNTKFCYYNNYSLTQPR 60
           MKNSLEEEIRQKSSSGRRKENKNGDNCEDQELLGGVKCPRCDSTNTKFCYYNNYSLTQPR
Sbjct: 1   MKNSLEEEIRQKSSSGRRKENKNGDNCEDQELLGGVKCPRCDSTNTKFCYYNNYSLTQPR 60

Query: 61  HFCKTCRRYWTKGGALRNVPIGGGCRKTKKLKSSSSSSSSAKFFTGIIPPLPVPPPSVDF 120
           HFCKTCRRYWTKGGALRNVPIGGGCRKTKKLKSSSSSSSSAKFFTGIIPPLPVPPPSVDF
Sbjct: 61  HFCKTCRRYWTKGGALRNVPIGGGCRKTKKLKSSSSSSSSAKFFTGIIPPLPVPPPSVDF 120

Query: 121 GGTGGGGGSCLSLASSIESLSSLNQDLHWKLQQQRLAMILGDHEQPPPQNKVDQTTTF 179
           GGTGGGGGSCLSLASSIESLSSLNQDLHWKLQQQRLAMILGDHEQPPPQNKV     F
Sbjct: 121 GGTGGGGGSCLSLASSIESLSSLNQDLHWKLQQQRLAMILGDHEQPPPQNKVQNHNFF 178

[Close]

BLAST of CsaV3_3G006960 vs. ExPASy TrEMBL
Match: A0A1S3BNR3 (dof zinc finger protein DOF5.7 OS=Cucumis melo OX=3656 GN=LOC103491891 PE=4 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 1.8e-83
Identity = 163/181 (90.06%), Postives = 167/181 (92.27%), Query Frame = 0


Query: 1   MKNSLEEEIRQKSSSGRRKENKNGDNCEDQELLGGVKCPRCDSTNTKFCYYNNYSLTQPR 60
           MKNSLEEEIRQKSS+GRRKENKNGDNCE +ELLG +KCPRCDSTNTKFCYYNNYSLTQPR
Sbjct: 1   MKNSLEEEIRQKSSTGRRKENKNGDNCE-EELLGSIKCPRCDSTNTKFCYYNNYSLTQPR 60

Query: 61  HFCKTCRRYWTKGGALRNVPIGGGCRKTKKLKSSSSSSSSAKFFTGIIPPLPVPPPSVDF 120
           HFCKTCRRYWTKGGALRNVPIGGGCRKTKKLKSSSSSSSSAKFFTGIIPP PVPPPSVDF
Sbjct: 61  HFCKTCRRYWTKGGALRNVPIGGGCRKTKKLKSSSSSSSSAKFFTGIIPPPPVPPPSVDF 120

Query: 121 GGT-GGGGGSCLSLASSIESLSSLNQDLHWKLQQQRLAMILGDHE--QPPPQNKVDQTTT 179
           GG  GGGGGSCLSLASSIESLSSLNQDLHWKLQQQRLAMILGD+E  Q  PQNKV     
Sbjct: 121 GGIGGGGGGSCLSLASSIESLSSLNQDLHWKLQQQRLAMILGDNEQQQQQPQNKVQNHNF 180

[Close]

BLAST of CsaV3_3G006960 vs. ExPASy TrEMBL
Match: A0A6J1EN47 (dof zinc finger protein DOF5.7-like OS=Cucurbita moschata OX=3662 GN=LOC111435875 PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 5.8e-42
Identity = 98/165 (59.39%), Postives = 107/165 (64.85%), Query Frame = 0


Query: 36  VKCPRCDSTNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKTKKLKSSS 95
           +KCPRC+STNTKFCYYNNY+LTQPRHFCKTCRRYWTKGGALRN+P+GGGCRK KKLKSSS
Sbjct: 24  LKCPRCNSTNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNIPVGGGCRKNKKLKSSS 83

Query: 96  SSSSSAKFFTGIIPPLPVPPPSVDFGGTGGGGG----SCLS------------------- 155
           S+S+   F TGI        PS+DF   G G      SC S                   
Sbjct: 84  SNSN---FLTGI-------SPSIDFSAIGSGRSLFPCSCFSLGQTAAPAPAAIPAANYSS 143

Query: 156 ------------LASSIESLSSLNQDLHWKLQQQRLAMILGDHEQ 166
                       LASSIESLS LNQDLHWKLQQQRL MI GDH+Q
Sbjct: 144 MGLYNLNDNTQQLASSIESLSYLNQDLHWKLQQQRLGMIFGDHDQ 178

[Close]

BLAST of CsaV3_3G006960 vs. ExPASy TrEMBL
Match: A0A6J1JBH6 (dof zinc finger protein DOF5.7-like OS=Cucurbita maxima OX=3661 GN=LOC111482951 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 1.1e-40
Identity = 105/203 (51.72%), Postives = 118/203 (58.13%), Query Frame = 0


Query: 1   MKNSLEEEIRQKSSSGRRKENKNGDNCEDQELLGGVKCPRCDSTNTKFCYYNNYSLTQPR 60
           MK  L++ I Q   +  R +               +KCPRC+STNTKFCYYNNY+LTQPR
Sbjct: 1   MKAPLQQPITQNDPNSHRSQPP-------------LKCPRCNSTNTKFCYYNNYNLTQPR 60

Query: 61  HFCKTCRRYWTKGGALRNVPIGGGCRKTKKLKSSSSSSSSAKFFTGIIPPLPVPPPSVDF 120
           HFCKTCRRYWTKGGALRN+PIGGGCRK KKLKSSSS+S+   F TGI        PS+DF
Sbjct: 61  HFCKTCRRYWTKGGALRNIPIGGGCRKNKKLKSSSSNSN---FLTGI-------SPSIDF 120

Query: 121 GGTGGGGG----SCLS----------------------------------LASSIESLSS 166
              G GG     SC S                                  LASSIESLS 
Sbjct: 121 STIGTGGSLFPCSCFSLGQTAATETAAATAIPATNYSSMGLYNLNDNTQQLASSIESLSY 180

[Close]

BLAST of CsaV3_3G006960 vs. ExPASy TrEMBL
Match: A0A6J1FVF9 (dof zinc finger protein DOF5.7 OS=Cucurbita moschata OX=3662 GN=LOC111447656 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 1.1e-40
Identity = 117/232 (50.43%), Postives = 129/232 (55.60%), Query Frame = 0


Query: 1   MKNSLEEEIRQKSSSGRRKENKNGDNCEDQELLGGVKCPRCDSTNTKFCYYNNYSLTQPR 60
           M+ S +EEI Q S + R K + N    + Q+    +KCPRCDSTNTKFCYYNNY LTQPR
Sbjct: 32  MRPSSQEEISQNSGTTRTKSSSNTKQQQTQQ-QQPLKCPRCDSTNTKFCYYNNYCLTQPR 91

Query: 61  HFCKTCRRYWTKGGALRNVPIGGGCRKTKKLKSSSSSSSS-------------AKFFTGI 120
           HFCKTCRRYWTKGGALRNVPIGGGCRKTKKLKSSSSSSSS              +FF GI
Sbjct: 92  HFCKTCRRYWTKGGALRNVPIGGGCRKTKKLKSSSSSSSSNNSKLLPSGDTPAFRFFAGI 151

Query: 121 IPPLPVPPPSVDF---GGTGGGGGSC---------------------------------- 172
                   PS+DF   GG G G  S                                   
Sbjct: 152 -------SPSIDFQLNGGLGVGLSSSSPQLFPTTPTTNHPYMGLNYDTNFPLIHHHNTNS 211

[Close]

BLAST of CsaV3_3G006960 vs. TAIR 10
Match: AT5G65590.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 147.9 bits (372), Expect = 8.0e-36
Identity = 93/220 (42.27%), Postives = 118/220 (53.64%), Query Frame = 0


Query: 13  SSSGRRKENKNGDNCEDQELLGGVKCPRCDSTNTKFCYYNNYSLTQPRHFCKTCRRYWTK 72
           S + + K+  +    +DQ+    +KCPRC+S NTKFCYYNNYSL+QPRHFCK+CRRYWT+
Sbjct: 21  SGTSQTKKPPSSSVAQDQQ---NLKCPRCNSPNTKFCYYNNYSLSQPRHFCKSCRRYWTR 80

Query: 73  GGALRNVPIGGGCRKTKK-------LKSSSSSSSSAKFFTGIIPPLP--VPPPS------ 132
           GGALRNVPIGGGCRKTKK       + +  SSSSS +FF+ I+       PPP+      
Sbjct: 81  GGALRNVPIGGGCRKTKKSIKPNSSMNTLPSSSSSQRFFSSIMEDSSKFFPPPTTMDFQL 140

Query: 133 ----------------------------------VDFG------------------GTGG 166
                                             VD G                  G   
Sbjct: 141 AGLSLNKMNDLQLLNNQEVLDLRPMMSSGRENTPVDVGSGLSLMGFGDFNNNHSPTGFTT 200

[Close]

BLAST of CsaV3_3G006960 vs. TAIR 10
Match: AT4G38000.1 (DNA binding with one finger 4.7 )

HSP 1 Score: 132.1 bits (331), Expect = 4.6e-31
Identity = 77/141 (54.61%), Postives = 86/141 (60.99%), Query Frame = 0


Query: 36  VKCPRCDSTNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKTKKLKSSS 95
           +KCPRCDS NTKFCYYNNYSL+QPRH+CK CRRYWT+GGALRNVPIGG  R   K  S  
Sbjct: 41  LKCPRCDSVNTKFCYYNNYSLSQPRHYCKNCRRYWTRGGALRNVPIGGSTRNKNKPCSLQ 100

Query: 96  SSSSSAKFFTGIIPPLPV-----PPPSVDFGGTGGGGGSCLSL-------ASSIESLSSL 155
             SS   F  G            P  ++    +GG  G    L       +SSIESLSS 
Sbjct: 101 VISSPPLFSNGTSSASRELVRNHPSTAMMMMSSGGFSGYMFPLDPNFNLASSSIESLSSF 160

Query: 156 NQDLHWKLQQQRL--AMILGD 163
           NQDLH KLQQQRL  +M L D
Sbjct: 161 NQDLHQKLQQQRLVTSMFLQD 181

[Close]

BLAST of CsaV3_3G006960 vs. TAIR 10
Match: AT2G28810.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 126.7 bits (317), Expect = 1.9e-29
Identity = 53/68 (77.94%), Postives = 61/68 (89.71%), Query Frame = 0


Query: 34  GGVKCPRCDSTNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKTKKLKS 93
           G +KCPRCDS NTKFCY+NNY+LTQPRHFCK CRRYWT+GGALRNVP+GGGCR+ KK KS
Sbjct: 92  GALKCPRCDSANTKFCYFNNYNLTQPRHFCKACRRYWTRGGALRNVPVGGGCRRNKKGKS 151

Query: 94  SSSSSSSA 102
            +S SSS+
Sbjct: 152 GNSKSSSS 159

[Close]

BLAST of CsaV3_3G006960 vs. TAIR 10
Match: AT2G28810.2 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 126.7 bits (317), Expect = 1.9e-29
Identity = 53/68 (77.94%), Postives = 61/68 (89.71%), Query Frame = 0


Query: 34  GGVKCPRCDSTNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKTKKLKS 93
           G +KCPRCDS NTKFCY+NNY+LTQPRHFCK CRRYWT+GGALRNVP+GGGCR+ KK KS
Sbjct: 75  GALKCPRCDSANTKFCYFNNYNLTQPRHFCKACRRYWTRGGALRNVPVGGGCRRNKKGKS 134

Query: 94  SSSSSSSA 102
            +S SSS+
Sbjct: 135 GNSKSSSS 142

[Close]

BLAST of CsaV3_3G006960 vs. TAIR 10
Match: AT1G07640.2 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 124.4 bits (311), Expect = 9.5e-29
Identity = 56/76 (73.68%), Postives = 63/76 (82.89%), Query Frame = 0


Query: 32  LLGGVKCPRCDSTNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKTKK- 91
           L G +KCPRCDS+NTKFCYYNNY+LTQPRHFCK CRRYWT+GGALRNVP+GGGCR+  K 
Sbjct: 73  LAGPLKCPRCDSSNTKFCYYNNYNLTQPRHFCKGCRRYWTQGGALRNVPVGGGCRRNNKK 132

Query: 92  -----LKSSSSSSSSA 102
                LKSSSSSS  +
Sbjct: 133 GKNGNLKSSSSSSKQS 148

The following BLAST results are available for this feature:

BLAST of CsaV3_3G006960 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8650202.1	3.0e-101	100.00	hypothetical protein Csa_010714 [Cucumis sativus]	[more]
XP_004134269.1	1.0e-93	97.19	dof zinc finger protein DOF5.7 [Cucumis sativus]	[more]
XP_008450228.1	3.7e-83	90.06	PREDICTED: dof zinc finger protein DOF5.7 [Cucumis melo]	[more]
XP_038905316.1	3.6e-62	75.57	dof zinc finger protein DOF4.7-like [Benincasa hispida]	[more]
XP_023552947.1	1.1e-42	61.49	dof zinc finger protein DOF5.7-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsaV3_3G006960 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LSL6	1.1e-34	42.27	Dof zinc finger protein DOF5.7 OS=Arabidopsis thaliana OX=3702 GN=DOF5.7 PE=2 SV...	[more]
Q84K52	6.4e-30	54.61	Dof zinc finger protein DOF4.7 OS=Arabidopsis thaliana OX=3702 GN=DOF4.7 PE=1 SV...	[more]
Q9ZV33	2.7e-28	77.94	Dof zinc finger protein DOF2.2 OS=Arabidopsis thaliana OX=3702 GN=DOF2.2 PE=2 SV...	[more]
Q6Z345	2.7e-28	81.54	Dof zinc finger protein 4 OS=Oryza sativa subsp. japonica OX=39947 GN=DOF4 PE=2 ...	[more]
Q8L9V6	1.3e-27	73.68	Dof zinc finger protein DOF1.1 OS=Arabidopsis thaliana OX=3702 GN=DOF1.1 PE=1 SV...	[more]

BLAST of CsaV3_3G006960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L2T9	5.0e-94	97.19	Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G115040 PE...	[more]
A0A1S3BNR3	1.8e-83	90.06	dof zinc finger protein DOF5.7 OS=Cucumis melo OX=3656 GN=LOC103491891 PE=4 SV=1	[more]
A0A6J1EN47	5.8e-42	59.39	dof zinc finger protein DOF5.7-like OS=Cucurbita moschata OX=3662 GN=LOC11143587...	[more]
A0A6J1JBH6	1.1e-40	51.72	dof zinc finger protein DOF5.7-like OS=Cucurbita maxima OX=3661 GN=LOC111482951 ...	[more]
A0A6J1FVF9	1.1e-40	50.43	dof zinc finger protein DOF5.7 OS=Cucurbita moschata OX=3662 GN=LOC111447656 PE=...	[more]

BLAST of CsaV3_3G006960 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G65590.1	8.0e-36	42.27	Dof-type zinc finger DNA-binding family protein	[more]
AT4G38000.1	4.6e-31	54.61	DNA binding with one finger 4.7	[more]
AT2G28810.1	1.9e-29	77.94	Dof-type zinc finger DNA-binding family protein	[more]
AT2G28810.2	1.9e-29	77.94	Dof-type zinc finger DNA-binding family protein	[more]
AT1G07640.2	9.5e-29	73.68	Dof-type zinc finger DNA-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003851	Zinc finger, Dof-type	PFAM	PF02701	zf-Dof	coord: 36..90 e-value: 5.1E-33 score: 113.0
IPR003851	Zinc finger, Dof-type	PROSITE	PS01361	ZF_DOF_1	coord: 38..74
IPR003851	Zinc finger, Dof-type	PROSITE	PS50884	ZF_DOF_2	coord: 36..90 score: 29.254648
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26
None	No IPR available	PANTHER	PTHR31992:SF178	DOF ZINC FINGER PROTEIN DOF5.7	coord: 17..168
None	No IPR available	PANTHER	PTHR31992	DOF ZINC FINGER PROTEIN DOF1.4-RELATED	coord: 17..168

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G006960.1	CsaV3_3G006960.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding