CsaV3_3G005500 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G005500
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Calcium-binding EF-hand family protein
Location	chr3: 4649090 .. 4650532 (-)
RNA-Seq Expression	CsaV3_3G005500
Synteny	CsaV3_3G005500

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TAGAAAAAACAAAGAAGCTAATATAAAATAGTAATCTCAAACGTAATTCTTTCCACTGAATTTTATATAGTGGAAACATTCAAATAAATAAAGACCAATTTTAAGTTGAATTAGAAACAAGAAGGCATCAACTAAGTAAAAGACATCTATACCCTTAGGACCTTCCAAGAACATCCCACCCCTCTCGCCTGCAATGCAAACCTTCCTTCATTATCTGTATCTTACTTGTCTTTTATGCCCTTCTCTCCTTCTCCGAAAAATCCCCAACCGGCAACCAACCTTTTCTCTCTCTATATAATTCCTTTTCAAAAGTTCACAATCCAATTCCAAATCCACTTCTCCTCAATAATCAATTTCTATTTTCTTCCTAATTTCCATGACTCCCAAGAACCAAATCCCCCAATCGGAATCTGGGTTCCAAGATTGGCTGCCCGTCATGGCTGGAAACCTCGGCGGCGAGGGGCTGATCGGAGAGCTCTGTAATGGGTTCAATCTGCTGATGGATAGAGAGAAGGGAGTGATCAATTTCGAGAGCTTGAAGAGGAATGCGGCGGCTTTAGGGCTCGGGGATTTGAGTGATGATGAACTCCGAGGAATGTTGCGGGAAGGGGATTTTGATGGCGATGGCGCTCTTAATCAGATGGAATTTTGTGTTCTTATGTTTAGATTAAGTCCTGAATTGATGGAAGCTTCTCGTTATTGCTTCCATGAAAGTCTTCGTCGAGAATTTAGGGATTCTTTTTCTTGATTTCTGTGTATGCTTCTCATTTTTTTGGGGATGGAATTAATGAAATATACGGCAAAACTCATAAACAAATTTGAGTCTCTGTTTCTCAATATTTAGTTGAGTGCAGCTGTTGATTTTGTTTTCGTTTTTTTGGGCAACCTCTTCAAAATTGCAACAATTTGTTTAAGGTTGAGGTTGGTGCTCCTTGACAATATAATAATATACGATTAGAGAGTGATTAGAACACTTAAATGTTGTTTTCTTAAAGAAATGACTAAAAACCCAACAAGATAACATAATTAAAAGTAACAACACATCATTCAAGATCTTATCTTAGATCTTTATCACTAAGTAATTTTAGTTTCCTAATTAAAGTGGTAACAAAGGGGTTTTGTGTGGATAGAGAAAGTCCAAGAAAATAAAGTGCATGGAAGTGAAGATAGTGAGTAAATACATTATAAAATTGAATTATCTAGTAAAAACAAGTGGTAATCTAATGCAATTTGATCATTATTGAATTTAAAAGATTGTTACGCCCCACCCCACTCACGGCCTTAACCAAACAAAAGCAGCCAAAAATCAACACACAACACTTCACTTTCATTCATTTATGCTCCAAAGTTCTCCAACAGTTCAAGATACAAATTTTCACTCACAAAAATAAGAAATTCAATCAAATATCTTCAACAGTCTTCAATCTTCAACTTCATTGCTTA

mRNA sequence

ATGACTCCCAAGAACCAAATCCCCCAATCGGAATCTGGGTTCCAAGATTGGCTGCCCGTCATGGCTGGAAACCTCGGCGGCGAGGGGCTGATCGGAGAGCTCTGTAATGGGTTCAATCTGCTGATGGATAGAGAGAAGGGAGTGATCAATTTCGAGAGCTTGAAGAGGAATGCGGCGGCTTTAGGGCTCGGGGATTTGAGTGATGATGAACTCCGAGGAATGTTGCGGGAAGGGGATTTTGATGGCGATGGCGCTCTTAATCAGATGGAATTTTGTGTTCTTATGTTTAGATTAAGTCCTGAATTGATGGAAGCTTCTCGTTATTGCTTCCATGAAAGTCTTCGTCGAGAATTTAGGGATTCTTTTTCTTGA

Coding sequence (CDS)

ATGACTCCCAAGAACCAAATCCCCCAATCGGAATCTGGGTTCCAAGATTGGCTGCCCGTCATGGCTGGAAACCTCGGCGGCGAGGGGCTGATCGGAGAGCTCTGTAATGGGTTCAATCTGCTGATGGATAGAGAGAAGGGAGTGATCAATTTCGAGAGCTTGAAGAGGAATGCGGCGGCTTTAGGGCTCGGGGATTTGAGTGATGATGAACTCCGAGGAATGTTGCGGGAAGGGGATTTTGATGGCGATGGCGCTCTTAATCAGATGGAATTTTGTGTTCTTATGTTTAGATTAAGTCCTGAATTGATGGAAGCTTCTCGTTATTGCTTCCATGAAAGTCTTCGTCGAGAATTTAGGGATTCTTTTTCTTGA

Protein sequence

MTPKNQIPQSESGFQDWLPVMAGNLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDLSDDELRGMLREGDFDGDGALNQMEFCVLMFRLSPELMEASRYCFHESLRREFRDSFS*

Homology

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BLAST of CsaV3_3G005500 vs. NCBI nr
Match: XP_004152909.1 (calcium-binding protein KRP1 [Cucumis sativus] >KGN56165.1 hypothetical protein Csa_010073 [Cucumis sativus])

HSP 1 Score: 254.2 bits (648), Expect = 5.7e-64
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0


Query: 1   MTPKNQIPQSESGFQDWLPVMAGNLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAA 60
           MTPKNQIPQSESGFQDWLPVMAGNLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAA
Sbjct: 1   MTPKNQIPQSESGFQDWLPVMAGNLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAA 60

Query: 61  LGLGDLSDDELRGMLREGDFDGDGALNQMEFCVLMFRLSPELMEASRYCFHESLRREFRD 120
           LGLGDLSDDELRGMLREGDFDGDGALNQMEFCVLMFRLSPELMEASRYCFHESLRREFRD
Sbjct: 61  LGLGDLSDDELRGMLREGDFDGDGALNQMEFCVLMFRLSPELMEASRYCFHESLRREFRD 120

Query: 121 SFS 124
           SFS
Sbjct: 121 SFS 123

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BLAST of CsaV3_3G005500 vs. NCBI nr
Match: XP_008463452.1 (PREDICTED: calcium-binding protein PBP1-like [Cucumis melo] >KAA0025444.1 calcium-binding protein PBP1-like [Cucumis melo var. makuwa] >TYK04738.1 calcium-binding protein PBP1-like [Cucumis melo var. makuwa])

HSP 1 Score: 240.7 bits (613), Expect = 6.6e-60
Identity = 117/123 (95.12%), Postives = 118/123 (95.93%), Query Frame = 0


Query: 1   MTPKNQIPQSESGFQDWLPVMAGNLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAA 60
           MT  N IPQSESGFQDWLPVMAG LGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAA
Sbjct: 1   MTSNNHIPQSESGFQDWLPVMAGKLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAA 60

Query: 61  LGLGDLSDDELRGMLREGDFDGDGALNQMEFCVLMFRLSPELMEASRYCFHESLRREFRD 120
           LGLGDLSDDELRGMLREGD +GDGALNQMEFCVLMFRLSPELMEASRYCFHESLRREFRD
Sbjct: 61  LGLGDLSDDELRGMLREGDLNGDGALNQMEFCVLMFRLSPELMEASRYCFHESLRREFRD 120

Query: 121 SFS 124
           SFS
Sbjct: 121 SFS 123

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BLAST of CsaV3_3G005500 vs. NCBI nr
Match: XP_038905287.1 (calcium-binding protein KRP1-like [Benincasa hispida])

HSP 1 Score: 225.7 bits (574), Expect = 2.2e-55
Identity = 108/120 (90.00%), Postives = 113/120 (94.17%), Query Frame = 0


Query: 1   MTPKNQIPQSESGFQDWLPVMAGNLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAA 60
           M  KNQIPQSES F+DWLP MA NLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAA 
Sbjct: 1   MASKNQIPQSESRFEDWLPAMAYNLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAV 60

Query: 61  LGLGDLSDDELRGMLREGDFDGDGALNQMEFCVLMFRLSPELMEASRYCFHESLRREFRD 120
           LGLGDL+D+ELRGMLREGDFDGDGALN+MEFCVLMFRLSP+LMEASRYCFHE LRREFRD
Sbjct: 61  LGLGDLTDEELRGMLREGDFDGDGALNKMEFCVLMFRLSPQLMEASRYCFHECLRREFRD 120

[Close]

BLAST of CsaV3_3G005500 vs. NCBI nr
Match: XP_022985284.1 (calcium-binding protein PBP1-like [Cucurbita maxima])

HSP 1 Score: 213.4 bits (542), Expect = 1.1e-51
Identity = 104/118 (88.14%), Postives = 108/118 (91.53%), Query Frame = 0


Query: 1   MTPKNQIPQSESGFQDWLPVMAGNLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAA 60
           M   NQIPQSESGF+DWLP MA  LGGEGLIGELCNGFNLLMD EKGVIN ESLKRNAAA
Sbjct: 1   MAGNNQIPQSESGFEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAA 60

Query: 61  LGLGDLSDDELRGMLREGDFDGDGALNQMEFCVLMFRLSPELMEASRYCFHESLRREF 119
           LGLGD SD+ELRGMLREGDFDGDGALNQMEFCVLMFRLSPELM+ASRYCF +SLRREF
Sbjct: 61  LGLGDHSDEELRGMLREGDFDGDGALNQMEFCVLMFRLSPELMDASRYCFQQSLRREF 118

[Close]

BLAST of CsaV3_3G005500 vs. NCBI nr
Match: XP_022144078.1 (calcium-binding protein PBP1-like [Momordica charantia])

HSP 1 Score: 212.2 bits (539), Expect = 2.5e-51
Identity = 103/118 (87.29%), Postives = 108/118 (91.53%), Query Frame = 0


Query: 1   MTPKNQIPQSESGFQDWLPVMAGNLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAA 60
           M  KNQ PQS+SGF+DWLP MA  LGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAA
Sbjct: 1   MAAKNQSPQSQSGFEDWLPAMAWKLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAA 60

Query: 61  LGLGDLSDDELRGMLREGDFDGDGALNQMEFCVLMFRLSPELMEASRYCFHESLRREF 119
           LGLGDLSD+ELRGML EGDFDGDGALNQMEFCVLMFRLSP+LM+ASRY   ESLRREF
Sbjct: 61  LGLGDLSDEELRGMLTEGDFDGDGALNQMEFCVLMFRLSPDLMDASRYWLQESLRREF 118

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BLAST of CsaV3_3G005500 vs. ExPASy Swiss-Prot
Match: O81831 (Calcium-binding protein KRP1 OS=Arabidopsis thaliana OX=3702 GN=KRP1 PE=2 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 1.6e-40
Identity = 86/117 (73.50%), Postives = 96/117 (82.05%), Query Frame = 0


Query: 3   PKNQIPQSESGFQDWLPVMAGNLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAA-L 62
           P  Q PQ    F D+LP MAGNLGGEGLIGELCNGF LLMDREKGVI FESL+RNAAA L
Sbjct: 10  PTQQNPQ--PNFHDFLPTMAGNLGGEGLIGELCNGFELLMDREKGVITFESLRRNAAAVL 69

Query: 63  GLGDLSDDELRGMLREGDFDGDGALNQMEFCVLMFRLSPELMEASRYCFHESLRREF 119
           GLGDL+D+++R M++EGDFD DGALNQMEFCVLMFRLSP+LMEASR    E +  EF
Sbjct: 70  GLGDLTDEDVRCMIKEGDFDCDGALNQMEFCVLMFRLSPDLMEASRCLVTEVIEEEF 124

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BLAST of CsaV3_3G005500 vs. ExPASy Swiss-Prot
Match: Q9LSQ6 (Calcium-binding protein PBP1 OS=Arabidopsis thaliana OX=3702 GN=PBP1 PE=1 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 2.1e-37
Identity = 80/116 (68.97%), Postives = 92/116 (79.31%), Query Frame = 0


Query: 4   KNQIPQSESGFQDWLPVMAGNLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAA-ALG 63
           +NQ PQ    FQD+ P MAG LGGEGLI E+C GF LLMD++KGVI FESL+RNA+  LG
Sbjct: 13  ENQEPQ----FQDFFPTMAGKLGGEGLIEEICKGFELLMDKDKGVITFESLRRNASTVLG 72

Query: 64  LGDLSDDELRGMLREGDFDGDGALNQMEFCVLMFRLSPELMEASRYCFHESLRREF 119
           LGDL+DD++R M+ EGDFD DGALNQMEFCVLMFRLSPELMEASR    E +  EF
Sbjct: 73  LGDLTDDDVRYMINEGDFDRDGALNQMEFCVLMFRLSPELMEASRCVVTEVIEEEF 124

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BLAST of CsaV3_3G005500 vs. ExPASy Swiss-Prot
Match: Q9ZPX9 (Calcium-binding protein KIC OS=Arabidopsis thaliana OX=3702 GN=KIC PE=1 SV=2)

HSP 1 Score: 114.8 bits (286), Expect = 7.1e-25
Identity = 55/107 (51.40%), Postives = 76/107 (71.03%), Query Frame = 0


Query: 11  ESGFQDWLPVMAGNLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDLSDDE 70
           E+ ++D LPVMA  +  E  + ELC GF+LL D E+ +I  ESL+RN+  LG+  +S ++
Sbjct: 19  ETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKED 78

Query: 71  LRGMLREGDFDGDGALNQMEFCVLMFRLSPELMEASRYCFHESLRRE 118
            +GM+REGD DGDGALNQ EFCVLM RLSPE+ME +     ++L +E
Sbjct: 79  AQGMVREGDLDGDGALNQTEFCVLMVRLSPEMMEDAETWLEKALTQE 125

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BLAST of CsaV3_3G005500 vs. ExPASy Swiss-Prot
Match: Q2TBN3 (Centrin-2 OS=Bos taurus OX=9913 GN=CETN2 PE=2 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 4.2e-09
Identity = 36/86 (41.86%), Postives = 51/86 (59.30%), Query Frame = 0


Query: 14  FQDWLPVMAGNLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDLSDDELRG 73
           F D+L VM   +  +    E+   F L  D E G I+F++LKR A  LG  +LSD+EL+ 
Sbjct: 86  FSDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELG-ENLSDEELQE 145

Query: 74  MLREGDFDGDGALNQMEFCVLMFRLS 100
           M+ E D DGDG +N+ EF  +M + S
Sbjct: 146 MIDEADRDGDGEVNEQEFLRIMKKTS 170

[Close]

BLAST of CsaV3_3G005500 vs. ExPASy Swiss-Prot
Match: Q9R1K9 (Centrin-2 OS=Mus musculus OX=10090 GN=Cetn2 PE=1 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 9.3e-09
Identity = 35/86 (40.70%), Postives = 51/86 (59.30%), Query Frame = 0


Query: 14  FQDWLPVMAGNLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDLSDDELRG 73
           F D+L VM   +  +    E+   F L  D E G I+F++LKR A  LG  +L+D+EL+ 
Sbjct: 86  FSDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELG-ENLTDEELQE 145

Query: 74  MLREGDFDGDGALNQMEFCVLMFRLS 100
           M+ E D DGDG +N+ EF  +M + S
Sbjct: 146 MIDEADRDGDGEVNEQEFLRIMKKTS 170

[Close]

BLAST of CsaV3_3G005500 vs. ExPASy TrEMBL
Match: A0A0A0L2H0 (EF-hand domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G081900 PE=4 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 2.8e-64
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0


Query: 1   MTPKNQIPQSESGFQDWLPVMAGNLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAA 60
           MTPKNQIPQSESGFQDWLPVMAGNLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAA
Sbjct: 1   MTPKNQIPQSESGFQDWLPVMAGNLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAA 60

Query: 61  LGLGDLSDDELRGMLREGDFDGDGALNQMEFCVLMFRLSPELMEASRYCFHESLRREFRD 120
           LGLGDLSDDELRGMLREGDFDGDGALNQMEFCVLMFRLSPELMEASRYCFHESLRREFRD
Sbjct: 61  LGLGDLSDDELRGMLREGDFDGDGALNQMEFCVLMFRLSPELMEASRYCFHESLRREFRD 120

Query: 121 SFS 124
           SFS
Sbjct: 121 SFS 123

[Close]

BLAST of CsaV3_3G005500 vs. ExPASy TrEMBL
Match: A0A5A7SII1 (Calcium-binding protein PBP1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold68G00340 PE=4 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 3.2e-60
Identity = 117/123 (95.12%), Postives = 118/123 (95.93%), Query Frame = 0


Query: 1   MTPKNQIPQSESGFQDWLPVMAGNLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAA 60
           MT  N IPQSESGFQDWLPVMAG LGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAA
Sbjct: 1   MTSNNHIPQSESGFQDWLPVMAGKLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAA 60

Query: 61  LGLGDLSDDELRGMLREGDFDGDGALNQMEFCVLMFRLSPELMEASRYCFHESLRREFRD 120
           LGLGDLSDDELRGMLREGD +GDGALNQMEFCVLMFRLSPELMEASRYCFHESLRREFRD
Sbjct: 61  LGLGDLSDDELRGMLREGDLNGDGALNQMEFCVLMFRLSPELMEASRYCFHESLRREFRD 120

Query: 121 SFS 124
           SFS
Sbjct: 121 SFS 123

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BLAST of CsaV3_3G005500 vs. ExPASy TrEMBL
Match: A0A1S3CKV7 (calcium-binding protein PBP1-like OS=Cucumis melo OX=3656 GN=LOC103501619 PE=4 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 3.2e-60
Identity = 117/123 (95.12%), Postives = 118/123 (95.93%), Query Frame = 0


Query: 1   MTPKNQIPQSESGFQDWLPVMAGNLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAA 60
           MT  N IPQSESGFQDWLPVMAG LGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAA
Sbjct: 1   MTSNNHIPQSESGFQDWLPVMAGKLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAA 60

Query: 61  LGLGDLSDDELRGMLREGDFDGDGALNQMEFCVLMFRLSPELMEASRYCFHESLRREFRD 120
           LGLGDLSDDELRGMLREGD +GDGALNQMEFCVLMFRLSPELMEASRYCFHESLRREFRD
Sbjct: 61  LGLGDLSDDELRGMLREGDLNGDGALNQMEFCVLMFRLSPELMEASRYCFHESLRREFRD 120

Query: 121 SFS 124
           SFS
Sbjct: 121 SFS 123

[Close]

BLAST of CsaV3_3G005500 vs. ExPASy TrEMBL
Match: A0A6J1JCW0 (calcium-binding protein PBP1-like OS=Cucurbita maxima OX=3661 GN=LOC111483323 PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 5.4e-52
Identity = 104/118 (88.14%), Postives = 108/118 (91.53%), Query Frame = 0


Query: 1   MTPKNQIPQSESGFQDWLPVMAGNLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAA 60
           M   NQIPQSESGF+DWLP MA  LGGEGLIGELCNGFNLLMD EKGVIN ESLKRNAAA
Sbjct: 1   MAGNNQIPQSESGFEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAA 60

Query: 61  LGLGDLSDDELRGMLREGDFDGDGALNQMEFCVLMFRLSPELMEASRYCFHESLRREF 119
           LGLGD SD+ELRGMLREGDFDGDGALNQMEFCVLMFRLSPELM+ASRYCF +SLRREF
Sbjct: 61  LGLGDHSDEELRGMLREGDFDGDGALNQMEFCVLMFRLSPELMDASRYCFQQSLRREF 118

[Close]

BLAST of CsaV3_3G005500 vs. ExPASy TrEMBL
Match: A0A6J1CSD5 (calcium-binding protein PBP1-like OS=Momordica charantia OX=3673 GN=LOC111013856 PE=4 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 1.2e-51
Identity = 103/118 (87.29%), Postives = 108/118 (91.53%), Query Frame = 0


Query: 1   MTPKNQIPQSESGFQDWLPVMAGNLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAA 60
           M  KNQ PQS+SGF+DWLP MA  LGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAA
Sbjct: 1   MAAKNQSPQSQSGFEDWLPAMAWKLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAA 60

Query: 61  LGLGDLSDDELRGMLREGDFDGDGALNQMEFCVLMFRLSPELMEASRYCFHESLRREF 119
           LGLGDLSD+ELRGML EGDFDGDGALNQMEFCVLMFRLSP+LM+ASRY   ESLRREF
Sbjct: 61  LGLGDLSDEELRGMLTEGDFDGDGALNQMEFCVLMFRLSPDLMDASRYWLQESLRREF 118

[Close]

BLAST of CsaV3_3G005500 vs. TAIR 10
Match: AT4G27280.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 166.8 bits (421), Expect = 1.1e-41
Identity = 86/117 (73.50%), Postives = 96/117 (82.05%), Query Frame = 0


Query: 3   PKNQIPQSESGFQDWLPVMAGNLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAA-L 62
           P  Q PQ    F D+LP MAGNLGGEGLIGELCNGF LLMDREKGVI FESL+RNAAA L
Sbjct: 10  PTQQNPQ--PNFHDFLPTMAGNLGGEGLIGELCNGFELLMDREKGVITFESLRRNAAAVL 69

Query: 63  GLGDLSDDELRGMLREGDFDGDGALNQMEFCVLMFRLSPELMEASRYCFHESLRREF 119
           GLGDL+D+++R M++EGDFD DGALNQMEFCVLMFRLSP+LMEASR    E +  EF
Sbjct: 70  GLGDLTDEDVRCMIKEGDFDCDGALNQMEFCVLMFRLSPDLMEASRCLVTEVIEEEF 124

[Close]

BLAST of CsaV3_3G005500 vs. TAIR 10
Match: AT5G54490.1 (pinoid-binding protein 1 )

HSP 1 Score: 156.4 bits (394), Expect = 1.5e-38
Identity = 80/116 (68.97%), Postives = 92/116 (79.31%), Query Frame = 0


Query: 4   KNQIPQSESGFQDWLPVMAGNLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAA-ALG 63
           +NQ PQ    FQD+ P MAG LGGEGLI E+C GF LLMD++KGVI FESL+RNA+  LG
Sbjct: 13  ENQEPQ----FQDFFPTMAGKLGGEGLIEEICKGFELLMDKDKGVITFESLRRNASTVLG 72

Query: 64  LGDLSDDELRGMLREGDFDGDGALNQMEFCVLMFRLSPELMEASRYCFHESLRREF 119
           LGDL+DD++R M+ EGDFD DGALNQMEFCVLMFRLSPELMEASR    E +  EF
Sbjct: 73  LGDLTDDDVRYMINEGDFDRDGALNQMEFCVLMFRLSPELMEASRCVVTEVIEEEF 124

[Close]

BLAST of CsaV3_3G005500 vs. TAIR 10
Match: AT2G46600.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 114.8 bits (286), Expect = 5.1e-26
Identity = 55/107 (51.40%), Postives = 76/107 (71.03%), Query Frame = 0


Query: 11  ESGFQDWLPVMAGNLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDLSDDE 70
           E+ ++D LPVMA  +  E  + ELC GF+LL D E+ +I  ESL+RN+  LG+  +S ++
Sbjct: 19  ETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKED 78

Query: 71  LRGMLREGDFDGDGALNQMEFCVLMFRLSPELMEASRYCFHESLRRE 118
            +GM+REGD DGDGALNQ EFCVLM RLSPE+ME +     ++L +E
Sbjct: 79  AQGMVREGDLDGDGALNQTEFCVLMVRLSPEMMEDAETWLEKALTQE 125

[Close]

BLAST of CsaV3_3G005500 vs. TAIR 10
Match: AT4G37010.1 (centrin 2 )

HSP 1 Score: 44.3 bits (103), Expect = 8.4e-05
Identity = 28/97 (28.87%), Postives = 49/97 (50.52%), Query Frame = 0


Query: 6   QIPQSESG---FQDWLPVMAGNLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALG 65
           ++ +++SG   F +++ +M    G    I EL   F ++     G I+   +K  A  LG
Sbjct: 70  EVDKNQSGAIDFDEFVHMMTTKFGERDSIDELSKAFKIIDHDNNGKISPRDIKMIAKELG 129

Query: 66  LGDLSDDELRGMLREGDFDGDGALNQMEFCVLMFRLS 100
             + +D+++  M+ E D D DG +N  EF  +M R S
Sbjct: 130 -ENFTDNDIEEMIEEADRDKDGEVNLEEFMKMMKRTS 165

[Close]

BLAST of CsaV3_3G005500 vs. TAIR 10
Match: AT4G37010.2 (centrin 2 )

HSP 1 Score: 44.3 bits (103), Expect = 8.4e-05
Identity = 28/97 (28.87%), Postives = 49/97 (50.52%), Query Frame = 0


Query: 6   QIPQSESG---FQDWLPVMAGNLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALG 65
           ++ +++SG   F +++ +M    G    I EL   F ++     G I+   +K  A  LG
Sbjct: 74  EVDKNQSGAIDFDEFVHMMTTKFGERDSIDELSKAFKIIDHDNNGKISPRDIKMIAKELG 133

Query: 66  LGDLSDDELRGMLREGDFDGDGALNQMEFCVLMFRLS 100
             + +D+++  M+ E D D DG +N  EF  +M R S
Sbjct: 134 -ENFTDNDIEEMIEEADRDKDGEVNLEEFMKMMKRTS 169

The following BLAST results are available for this feature:

BLAST of CsaV3_3G005500 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004152909.1	5.7e-64	100.00	calcium-binding protein KRP1 [Cucumis sativus] >KGN56165.1 hypothetical protein ...	[more]
XP_008463452.1	6.6e-60	95.12	PREDICTED: calcium-binding protein PBP1-like [Cucumis melo] >KAA0025444.1 calciu...	[more]
XP_038905287.1	2.2e-55	90.00	calcium-binding protein KRP1-like [Benincasa hispida]	[more]
XP_022985284.1	1.1e-51	88.14	calcium-binding protein PBP1-like [Cucurbita maxima]	[more]
XP_022144078.1	2.5e-51	87.29	calcium-binding protein PBP1-like [Momordica charantia]	[more]

BLAST of CsaV3_3G005500 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O81831	1.6e-40	73.50	Calcium-binding protein KRP1 OS=Arabidopsis thaliana OX=3702 GN=KRP1 PE=2 SV=1	[more]
Q9LSQ6	2.1e-37	68.97	Calcium-binding protein PBP1 OS=Arabidopsis thaliana OX=3702 GN=PBP1 PE=1 SV=1	[more]
Q9ZPX9	7.1e-25	51.40	Calcium-binding protein KIC OS=Arabidopsis thaliana OX=3702 GN=KIC PE=1 SV=2	[more]
Q2TBN3	4.2e-09	41.86	Centrin-2 OS=Bos taurus OX=9913 GN=CETN2 PE=2 SV=1	[more]
Q9R1K9	9.3e-09	40.70	Centrin-2 OS=Mus musculus OX=10090 GN=Cetn2 PE=1 SV=1	[more]

BLAST of CsaV3_3G005500 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L2H0	2.8e-64	100.00	EF-hand domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G081900 PE=...	[more]
A0A5A7SII1	3.2e-60	95.12	Calcium-binding protein PBP1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3CKV7	3.2e-60	95.12	calcium-binding protein PBP1-like OS=Cucumis melo OX=3656 GN=LOC103501619 PE=4 S...	[more]
A0A6J1JCW0	5.4e-52	88.14	calcium-binding protein PBP1-like OS=Cucurbita maxima OX=3661 GN=LOC111483323 PE...	[more]
A0A6J1CSD5	1.2e-51	87.29	calcium-binding protein PBP1-like OS=Momordica charantia OX=3673 GN=LOC111013856...	[more]

BLAST of CsaV3_3G005500 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G27280.1	1.1e-41	73.50	Calcium-binding EF-hand family protein	[more]
AT5G54490.1	1.5e-38	68.97	pinoid-binding protein 1	[more]
AT2G46600.1	5.1e-26	51.40	Calcium-binding EF-hand family protein	[more]
AT4G37010.1	8.4e-05	28.87	centrin 2	[more]
AT4G37010.2	8.4e-05	28.87	centrin 2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.238.10		coord: 11..122 e-value: 2.6E-19 score: 71.2
None	No IPR available	PANTHER	PTHR47319:SF6	CALCIUM-BINDING PROTEIN KRP1	coord: 9..120
IPR002048	EF-hand domain	PFAM	PF13833	EF-hand_8	coord: 45..97 e-value: 2.4E-18 score: 65.7
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 66..101 score: 10.189618
IPR044205	Calcium-binding protein KIC/PBP1/KRP1	PANTHER	PTHR47319	CALCIUM-BINDING PROTEIN KIC	coord: 9..120
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 79..91
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 32..98

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G005500.1	CsaV3_3G005500.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005509	calcium ion binding