CsaV3_3G005140 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G005140
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr3: 4287045 .. 4293031 (+)
RNA-Seq ExpressionCsaV3_3G005140
SyntenyCsaV3_3G005140
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGATTGCCCTTCAAGGAGAACTCGCGAACATTAAAGCTAGCAGTTCGTTCTATTCCCAACAATTTGGTAAGCTTCTGAGTTCCGATTCCTTACCTTCTACTTTTTCTGAGGACATGCCCTTCTACTTGACTGTATCAGATCCTGCCCTCGGAAGGTCTAAAACAAGATTGTCACTCTGCATTGCCTTGGTTTTCAAATGGTCATATGTAGTATTTGTCTGATGAAAAGCAGTTGTTACTTAAATTTTATGTAGTAAGTTCAATAAGTATCCTTATAGAATACTTGTGACAGTTTTGACCTCCCCCATTCTATCTAGAGGCTGAGAAAAGTAACTTGCAATTGTCGGTAGCAGCATTCCCTTGGAAGATTCACTGTGGGATTGATATCATTCCTGTTGGTTATGATTTGATTTGTAAAACATTTTATCCCAGATTGGTTGGAATTCATTGTAATAATGTTTTCAGGCTCAGCTAGAGGGATTAATAATGTTGATGCATTCGATATTTTGTTGTGTGCTCCTGCTACTAACATTTGTGGGGGTATAAGGATAGAAATGGGAAGCCTGAGAACATGATGTTAGGGCATAGGAATAGGATTAATGTGTGATTGTTTAGGCCTTTGAGAATGAGAATTTTGGAGATTTTTATTTCATTTGGCTGTCTAAACTATTATATTTTTGTCCTAAACTAATTCATTATATAAAGTTTATTTACCCTGTATGATAGGATGGGGGGTTTCGAAGCAAAAATCATATGATTGCTAACACATCAATATGTTAATCTCAATTTATTGTACAAATGTAAATCAACATTGTTGTTTTTATTTAATTCTAGTTCATATTAGATATAAAGTAATGATTGTATAGTTTTTATGAATAATTCAATCTGAAATTAAATGTAATAATCTGGTTTTGATATCCATTACTTTTGGTGGATTTGAGATGTCAATGTTATTGTCTGAATAACCGTAGCCTTTCCAAATGTATAAATTTTCTCCTCTTGCATTACCTTCAGCCAAGGCTACAAAATTATCATTGATTTTCTTTTTCTTGCTTTCCTCTCTTATTCTCTATTTTGTATTAATCCATTTGTGGTTGACCATCAGATCGTTTTAGAGAAGTTGTTGCTAGCCATTGAAACACAGATTAGGATAGTGAAGAGCCAGAGAGAGAGGATCGAAAAGAGAGCTTGAGAGAGATTAGGGTAGCAAATGATAGAGAGGAAATCAAGAAGAAAAAAAAAAAGAGGTTGAAAGAGTGAGATAAGAAGACAAGGATAGAGCTGATAACCAATTTGAGTGCACGAGATTTTGTTTGATATTTTTACTTAGTATATGAGGTTACTAAAGAGGGAAAAAAATTGCCAAAATGAGCTCAAACATTTGTATGTTTACCAGCAAGAGGTACTGAGTTAAAAAAAAACCTCAATTTCAAAAGGTTGGACAAATTCTTATTTTCTATCCCAATTTTGGTTCATCCAACCACTAGATCCTTATGTTATTATTCCACGAGATTGATCCTTTAACTTATATTTGACCATCTATTTTCTATTTTAAGAGTTCATACAAGAACACTATTGTAACCAACTAAAATAAACTCCCGAATCCAAACACCTCCTAAGATTTAGGGTGCAATTATAATTGAATTAGGTTTTAAAAATAATAGGTTGGAATGATGATAAATGTGACAGGATATAAATTGAATGATATAAGAGAACTCAATGAAATTAATTTTTTATTAAAGTCTGGAATGGTTAATAAAGAAAAAAGGTTATATAAATGCCTTAGACACAGCCAAGCAAACCAAAAAAACTTCCCTCCTCCCCAGTTGTTGTTTGTCATAGTCACCTTCACCTTCACCTCGCTCAGTTTCCTCTTTCTTTCTTCCTTTCCTTGGACTGTTGTGGCTACATTGAGACTATGAAACATAGACAATCATACAAACACCATAAGCTCCACGGTTTCGCTTTCTCACTCACTCAACCACCTCTGCGACTCTCTCTTCCTTCTTTGCTCCTTTCGATTTCCTTCTCTCACGTTCGCAGAAATTTCGTTAAACTGGTATGTGAATCGAATTCTTCTTGCTTAATCACTAATTTTTGTTTTCTGTTTTGTTCATGGATCAAAAAGCTATAGTTTTCTCTTCTCTATTGAGCTCGTTGTATCCTTAACTTCAGATGTTCATCCACTTTAGAAAAATTGCGACTTCATTAAAACCCAAGTTCTCAAATTCCCTCAACAAGCTTTATTCCCATCTGCCATTGAAATTGAAGCATTCCCCTGAGCTCAACCTGCCGTCTCAACATTCTCCAGAAACCCTCACAAGTTCCCAACTCAAGGCTCTAGTTCTCAGTCGTTTCTCCCATGGGAAGTTCGTCGACCTTTTTCAAAATGTCGTTGCCTCTCCCTCCGTTCTTCTCACTGCCTCCCAAAACCTCATCACTCCGCCATTCAGTAATGCCCCCGATTCCTTACCCCTTTTCGATTTGGTCTCCAAATGCTTTTCGGTCGAGGTCATGGCTCGGGAGCTCTCTGAAAATCGTTTTGATGTTGGAGCTTGCTGTGTTCCGATGGCACCATTGGAAGAGAAAGGTGAGTCTCTGCTTTTACCGAATTTAAAATTGAAGGTTTTAATTGAGGCTATTAGGATGGTGATGGAAATTGTTTATGACGAACGATTTGTAACTTTCTCTTACGGTGGGCGTGTCGGTATGGGGCGACACACTGCGATTAGGTACCTGAAAAACTCGGTGCAAAACCCTAGTTGGTGGTTTACTGTTGCATTTCGTCGCAAAAAGTTTGAATCTGTACATGTAAATACGTTGTGTTTATTGATGCAAGAGAAAATTAAGGATGATATTCTGATTTATATGTTAAGGAAACTGTTTGAAGTGGAAGCAATTCAAATTGAATTGGGTGGTTGTTATTTAGGAAGGGGTTTCCCTCAGGAAAGTGGTTTGTGTTCCATCTTGTTAAATATATACTTCAATGGCTTTGATAAGGAAATTCAACGAATTCGACTCCAAAAAATTGAAGAAAATCCTAAGTTCAATCTGGATGAGATTGTTTCTTTTCATAATCCAGTAAAAATATATGCTGTTAGATATCTGGATGAGATATTAGTTATAACGTCAGGGTCAAAGATGCTAACAATGGAGTTAAAAAGCCAGGTCCTAAAGTATTTAGAAGGGAATTTAGAACTGGAAGTCGATCGAATGAATACTGCGATTCATAGTGCTGTCTCAGAGAAAATTGGTTTCTTAGGAATGGAACTACGGGCTGTACCACCGTCAGTTCTACATCCACCAATGTCAGAGAAGGCAATCAGGGCAAGGAAGAAGTACCTTAGACAGAAGGAAGTTAGAGCAATAGAATTGAGAAATGCCCGTGAGAGAAATAGGAAAAAATTGGGATTGAAGATATTGAGTCATGTGTTCAAGAAATTCAAGAGAACTGGTGGGTTCAAATCTGAATTTCAAATTGAGAAGGAAGTTAGAAGTATCTTCAGAAACTGGGCCGATGAAGTGGTGCAAGATTTCTTTGAGTCCTCTGAAGATCATGCAGAGTGGCACCGTGTGCTGTCAGCAGGTGACTTCCTCTCTTTAAAACACATAAGAAATCAATTGCCAGAAGATCTTGTGAATGCTTATGATAGGTTTCAAGATCAAGTAAACAAGCACTTGAATCCTGTAAAGTTTAAAAAGGAAAAGGCTCGGGAGGATGAAGAGAAAAGATTGGAGGAAGAAGAACTATATGCCAAAAGAACAGTTGACGACTTAACAAGGCTATGCATCAAAGTTGATGCTCCTATAGAGCTTGTTAGGAAGGCAGTCAGGATGGTTGGGTTTACAAACAACATGGGTCGCCCTCGGCCAATCAGCTCACTCATTGTTCTTGAAGATGCTGATATTATCAAGTGGTATTCTGGTGTAGGAAGACGGTGGTTAGACTTCTTCTGCTGTTGTCATAACTATAAGATGGTCAAAACTGTTGTAACTTACCACTTAAGGTTTTCTTGTATTTTGACATTGGCAGAAAAGCATGAATCAACCAAACGAGAAGCCATGAAACATTACAGTAAGGATTTGAAAGTCTTCGATCTGAATGGCAATGAAGAAATGCACTTCCCAACAGAAAAAGAAGTTAAGATGTTGGGAGAAAGAAATCTTGCAGACCCGTATCCTGTTGATGGTGCTTTATCTTTGCTTCTGATTAGGTTAGCCACTGATGAAGCTTCCTATCCTTGTATTGCTAATTTTTGCAATAGAACAAACTCTATTTTATACCGTGTCCGATTACTGCAAAGGACTCTGAATGTCAATCCATCTGATGGAGTGGAATGGGTGAGAGGGATGGGAGTGATTCATGAAAGTTTAAATCAGAGATGCCTCCCTCTTTGTGCTGATCACATTAGTGATTTATACATGGGGAAAATTAACCTTCAAGACTTGGATTGCACCTTATCATTGGATATGGACTGAATGTAGTTCACGTTACTTTTGAGTTTCTTTCATCCTCCATGTCGACAAGATGGTATCATGACGTCTTAGCCACCCCTCCTTTGTGTGCCAATCTGGACTGTAAACAAATTATTCAATTCAACGAATGTTGGTGAACTGATGGCCATTTCAAGGAGGCAAAAGGGGTGTGAACAGACTATTTATGGAGAAGGCAGGAGTAGAGAGACTTTGAGAGAGAGAAAATACGAAGTAACTTCTTGAGCCTGCATTATTCTCTCTTATTTGTAGGGAGTTATTGAAAGAATGAACATCTTTTGTGTACCCTTCGATAGGATCCATTTGTAGGATATTTCATTCATCAGTGAATCGTTTCTTAAAAACTGAAGAAAGTGGTTCACTGTTCTGGAAGCCATGTACAGGCTCATCTCATGGAAAGATTGAATTATATCATTTGGTCTCTGAGGTTTAGAGTTAGATTTTAGTTTTTTGGTTTTTCATATATTCTCGACTATGCTGTAGAGGCAATTTATTTGTTATTCTTAGTTCTCATGTTTTTACTAGTTTGTATGGATATAACGAGGGCACCAAAGGGTCGTCAACCTAGTTAAGATATCCGAGTACGTCTACTGATCCATAAGTTATCTTGCTCATTGTATAACTCTCTTGTTCCTTTGAGCTTTTGTCTCAATTTATGATCATTAATAAAAGAGACTCGTTTCCCTTCCAAAAAAAGATATGGTCCTTGAAGCTTCAGAAGATACTTTTAGAATCTCTGAAGTTCAGAAAAATGTTCAAGATAATCCCCACAGTTTTTTCTTCTTTGTTTGTTCCTACTGATATGGAAAATTTTCAGCCCATTCTGCTTTCATTTTTGTCATAGCTTCAATTATTCTTTTATATTTTGTTGTTACGAGATGTTATTTATTGGGCTCCTGGTGAATTGATCAATCGTGGCCGCAATCTTCTCCAGCATTGGCAAGTACCCTCTGGAGGGGGAGAAGAAACTGGTGGGAGCGGGAAGGGTGGAGATGACAAGAGAGAAGGAAAAATATCACATAAGCCCAAATAAACTTTTAAAAATTAGCAAAAAAACATGCCACATCAATGATCCATTAATCAACTAATCGTGACTTTAGAGTCCATTTAGAAATATTTTCCCATCCTAAAGGATTGAGGTGTTTTTGGGATGAAAAGTGCATTTTGCCCTAGTTTAAATTCTCCAAATTTTATGGACTAAAAGTGCATTTTGCTAGTTTATATGATTGGAAGGTAGCTAGTGGATATAGTTGAGTAAATTATTAATTGTTATTCTTTGGGAGTTTGAGTTTATATTGTGGATTGACTTATTGATTGTAATTCTTTCTGAGTTTGCTAGTTAATGAATATCACGGGTAAAACATCTAAAAAAAAATGTGTGCAATGTGATTATGTTTAAATAACTGTTCCTGTTCCTGTTCCTGTTCCTTGTAATATGGTTTTACCTTTGCTTCAATAACCAGGAACTCAAACAAAAAGGAGGCAGTTAA

mRNA sequence

ATGGTGATTGCCCTTCAAGGAGAACTCGCGAACATTAAAGCTAGCAGTTCGTTCTATTCCCAACAATTTGGTAAGCTTCTGAGTTCCGATTCCTTACCTTCTACTTTTTCTGAGGACATGCCCTTCTACTTGACTGTATCAGATCCTGCCCTCGGAAGGTCTAAAACAAGATTGTCACTCTGCATTGCCTTGGCTGAGAAAAGTAACTTGCAATTGTCGGTAGCAGCATTCCCTTGGAAGATTCACTGTGGGATTGATATCATTCCTGTTGGCTCAGCTAGAGGGATTAATAATGTTGATGCATTCGATATTTTGTTGTGTGCTCCTGCTACTAACATTTGTGGGGTTGTTGTTTGTCATAGTCACCTTCACCTTCACCTCGCTCAGTTTCCTCTTTCTTTCTTCCTTTCCTTGGACTGTTGTGGCTACATTGAGACTATGAAACATAGACAATCATACAAACACCATAAGCTCCACGGTTTCGCTTTCTCACTCACTCAACCACCTCTGCGACTCTCTCTTCCTTCTTTGCTCCTTTCGATTTCCTTCTCTCACGTTCGCAGAAATTTCGTTAAACTGGAACTCAAACAAAAAGGAGGCAGTTAA

Coding sequence (CDS)

ATGGTGATTGCCCTTCAAGGAGAACTCGCGAACATTAAAGCTAGCAGTTCGTTCTATTCCCAACAATTTGGTAAGCTTCTGAGTTCCGATTCCTTACCTTCTACTTTTTCTGAGGACATGCCCTTCTACTTGACTGTATCAGATCCTGCCCTCGGAAGGTCTAAAACAAGATTGTCACTCTGCATTGCCTTGGCTGAGAAAAGTAACTTGCAATTGTCGGTAGCAGCATTCCCTTGGAAGATTCACTGTGGGATTGATATCATTCCTGTTGGCTCAGCTAGAGGGATTAATAATGTTGATGCATTCGATATTTTGTTGTGTGCTCCTGCTACTAACATTTGTGGGGTTGTTGTTTGTCATAGTCACCTTCACCTTCACCTCGCTCAGTTTCCTCTTTCTTTCTTCCTTTCCTTGGACTGTTGTGGCTACATTGAGACTATGAAACATAGACAATCATACAAACACCATAAGCTCCACGGTTTCGCTTTCTCACTCACTCAACCACCTCTGCGACTCTCTCTTCCTTCTTTGCTCCTTTCGATTTCCTTCTCTCACGTTCGCAGAAATTTCGTTAAACTGGAACTCAAACAAAAAGGAGGCAGTTAA

Protein sequence

MVIALQGELANIKASSSFYSQQFGKLLSSDSLPSTFSEDMPFYLTVSDPALGRSKTRLSLCIALAEKSNLQLSVAAFPWKIHCGIDIIPVGSARGINNVDAFDILLCAPATNICGVVVCHSHLHLHLAQFPLSFFLSLDCCGYIETMKHRQSYKHHKLHGFAFSLTQPPLRLSLPSLLLSISFSHVRRNFVKLELKQKGGS*
Homology
[Close]
BLAST of CsaV3_3G005140 vs. NCBI nr
Match: KGN56130.1 (hypothetical protein Csa_010814 [Cucumis sativus])

HSP 1 Score: 404.1 bits (1037), Expect = 7.3e-109
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0 

Query: 1   MVIALQGELANIKASSSFYSQQFGKLLSSDSLPSTFSEDMPFYLTVSDPALGRSKTRLSL 60
           MVIALQGELANIKASSSFYSQQFGKLLSSDSLPSTFSEDMPFYLTVSDPALGRSKTRLSL
Sbjct: 1   MVIALQGELANIKASSSFYSQQFGKLLSSDSLPSTFSEDMPFYLTVSDPALGRSKTRLSL 60

Query: 61  CIALAEKSNLQLSVAAFPWKIHCGIDIIPVGSARGINNVDAFDILLCAPATNICGVVVCH 120
           CIALAEKSNLQLSVAAFPWKIHCGIDIIPVGSARGINNVDAFDILLCAPATNICGVVVCH
Sbjct: 61  CIALAEKSNLQLSVAAFPWKIHCGIDIIPVGSARGINNVDAFDILLCAPATNICGVVVCH 120

Query: 121 SHLHLHLAQFPLSFFLSLDCCGYIETMKHRQSYKHHKLHGFAFSLTQPPLRLSLPSLLLS 180
           SHLHLHLAQFPLSFFLSLDCCGYIETMKHRQSYKHHKLHGFAFSLTQPPLRLSLPSLLLS
Sbjct: 121 SHLHLHLAQFPLSFFLSLDCCGYIETMKHRQSYKHHKLHGFAFSLTQPPLRLSLPSLLLS 180

Query: 181 ISFSHVRRNFVKLELKQKGGS 202
           ISFSHVRRNFVKLELKQKGGS
Sbjct: 181 ISFSHVRRNFVKLELKQKGGS 201

[Close]
BLAST of CsaV3_3G005140 vs. NCBI nr
Match: XP_031738720.1 (nuclear intron maturase 3, mitochondrial [Cucumis sativus])

HSP 1 Score: 98.2 bits (243), Expect = 8.6e-17
Identity = 47/47 (100.00%), Postives = 47/47 (100.00%), Query Frame = 0 

Query: 147 MKHRQSYKHHKLHGFAFSLTQPPLRLSLPSLLLSISFSHVRRNFVKL 194
           MKHRQSYKHHKLHGFAFSLTQPPLRLSLPSLLLSISFSHVRRNFVKL
Sbjct: 1   MKHRQSYKHHKLHGFAFSLTQPPLRLSLPSLLLSISFSHVRRNFVKL 47

[Close]
BLAST of CsaV3_3G005140 vs. ExPASy TrEMBL
Match: A0A0A0L2E6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G077640 PE=4 SV=1)

HSP 1 Score: 404.1 bits (1037), Expect = 3.5e-109
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0 

Query: 1   MVIALQGELANIKASSSFYSQQFGKLLSSDSLPSTFSEDMPFYLTVSDPALGRSKTRLSL 60
           MVIALQGELANIKASSSFYSQQFGKLLSSDSLPSTFSEDMPFYLTVSDPALGRSKTRLSL
Sbjct: 1   MVIALQGELANIKASSSFYSQQFGKLLSSDSLPSTFSEDMPFYLTVSDPALGRSKTRLSL 60

Query: 61  CIALAEKSNLQLSVAAFPWKIHCGIDIIPVGSARGINNVDAFDILLCAPATNICGVVVCH 120
           CIALAEKSNLQLSVAAFPWKIHCGIDIIPVGSARGINNVDAFDILLCAPATNICGVVVCH
Sbjct: 61  CIALAEKSNLQLSVAAFPWKIHCGIDIIPVGSARGINNVDAFDILLCAPATNICGVVVCH 120

Query: 121 SHLHLHLAQFPLSFFLSLDCCGYIETMKHRQSYKHHKLHGFAFSLTQPPLRLSLPSLLLS 180
           SHLHLHLAQFPLSFFLSLDCCGYIETMKHRQSYKHHKLHGFAFSLTQPPLRLSLPSLLLS
Sbjct: 121 SHLHLHLAQFPLSFFLSLDCCGYIETMKHRQSYKHHKLHGFAFSLTQPPLRLSLPSLLLS 180

Query: 181 ISFSHVRRNFVKLELKQKGGS 202
           ISFSHVRRNFVKLELKQKGGS
Sbjct: 181 ISFSHVRRNFVKLELKQKGGS 201

The following BLAST results are available for this feature:
BLAST of CsaV3_3G005140 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN56130.17.3e-109100.00hypothetical protein Csa_010814 [Cucumis sativus][more]
XP_031738720.18.6e-17100.00nuclear intron maturase 3, mitochondrial [Cucumis sativus][more]
BLAST of CsaV3_3G005140 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_3G005140 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L2E63.5e-109100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G077640 PE=4 SV=1[more]
BLAST of CsaV3_3G005140 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G005140.1CsaV3_3G005140.1mRNA