CsaV3_3G004910 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G004910
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr3: 4103892 .. 4105475 (-)
RNA-Seq ExpressionCsaV3_3G004910
SyntenyCsaV3_3G004910
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GAGAAATGCCCTAAATATTGTTTCCTTTTTTATCTCTATGTACTATTCTATTTATTCCCCCTCTTGTACCTATTGTATTTTTATCAGAAAATAATAAGAACAAAAATATAGTGATTTTTCTCTCGGTACTTGGATTTCCACGTAAGTCGGTGTTTCTATTTTTATTGCTTTTAGTACTAATCATTCAATACTTTCAAATACAAAGTTTTCAATTGATACTTTTAATCAAACAGAACTTTCATTCAGTCAATACTTTAATAAAATCAAAACTTTTAATACTACAATACTTTAAAATATCGAGTGGGAAAGTTGCATAGTTAGTTGAAGTAACCCAGCAGAAATAGTTACCTGTCAGTAACACCAGTCATTCATTCAATCAAAGATGTTGATTAACAATGTCAACCAAAACAAAAATCAAATACTTAAGTGTGAGGCCATTTGAGTGCAACACATACATGTCTTTTGGCAAGTAACTTTCAGTTAGATCATGTACTGTCAATTCAAAATTGAGCTACAACAAAATATCATAAAATCCCCAAAACACTGAAATTAGCCTATCCAGATAGCCCCTATCGAATCATTCGAAATGTTTTGTTTCATAAACGTTTGAAACAAAACAATGAAGTTTCAAATACACATTTCAGTAGCATAACTCATCAAATCAAATAATTCAAAATCTTTCAAAACTTTTCAAAAGTAACCGAAGTCAAAACAGAAACACTTTCAATTCAACATCACTTGAAACATTTCCAACCATCATTCAAAACATTCACATATTACTTTTATTTGAAAAAAGTCCACAAAAAATATACAAAACACTTTCATTCCATCCTTTAATCATATAAAACATACTCTTAAAAATTTATGAAATCACAATAATCAAAACAGACAGTTCTCTGTCCAAAAATCCACTACCTTGAAAAAAAAAAAAAATAGATGCCCAGACGGTAAACATAATGTTTACGTATTAGAACTCGATTCAAAAACCTTGACACCCATAGATTTTTGAACAAGAACGTGCTTGACCAAAATCCACCAGAAACCTTAATTAATCACTCCAATTTAGTCCAAAACTAGAACCAACAAATTTTCACAAGTTAAAAACTCATACTTTAATTGAGTCCGAACTAATTCGAAACGTGTCCAAACTTGCTAAACCTTAATCGAACACTTGGGAATTTACCTAAACTTAACCCAAAAAAAAGTTCTAAGAGTTCAGAATAACACTGAAACAATTAAAATATTATCCGAAAATGAAAGAAGAGCAATGATCCTTAGTGACTTACCGAAAAAGCCTCTGAACCTTGCTGGTCGGAGCCCAAAAAAGTTTGAACTTGCAGAGCTGGGCCTTAAAACGATATGGGTAAATTGATTTGAAGGGAAACAGAGTGTGGGCCAATGCCGAAGCTCGTAAAAGGTGCTATGAAGGTTGTTCGAAGTGGTGTTCGCGAAACAAGTCAGATTCGTGGGTCAACTGAGAAAGAATGCTCGGCGTCTATCTATGTGGTCGACTACTGGAGTCAGTGGCAGAGAATCGTGGTCGTCGACGTAGGTTCGAAGAGCCGCCGGAGAAAAGCGGAGTAA

mRNA sequence

ATGATCCTTAGTGACTTACCGAAAAAGCCTCTGAACCTTGCTGGTCGGAGCCCAAAAAAGTTTGAACTTGCAGAGCTGGGCCTTAAAACGATATGGCTCGTAAAAGGTGCTATGAAGGTTGTTCGAAGTGGTGTTCGCGAAACAAGTCAGATTCGTGGGTCAACTGAGAAAGAATGCTCGGCGTCTATCTATGTGGTCGACTACTGGAGTCAGTGGCAGAGAATCGTGGTCGTCGACGTAGGTTCGAAGAGCCGCCGGAGAAAAGCGGAGTAA

Coding sequence (CDS)

ATGATCCTTAGTGACTTACCGAAAAAGCCTCTGAACCTTGCTGGTCGGAGCCCAAAAAAGTTTGAACTTGCAGAGCTGGGCCTTAAAACGATATGGCTCGTAAAAGGTGCTATGAAGGTTGTTCGAAGTGGTGTTCGCGAAACAAGTCAGATTCGTGGGTCAACTGAGAAAGAATGCTCGGCGTCTATCTATGTGGTCGACTACTGGAGTCAGTGGCAGAGAATCGTGGTCGTCGACGTAGGTTCGAAGAGCCGCCGGAGAAAAGCGGAGTAA

Protein sequence

MILSDLPKKPLNLAGRSPKKFELAELGLKTIWLVKGAMKVVRSGVRETSQIRGSTEKECSASIYVVDYWSQWQRIVVVDVGSKSRRRKAE*
Homology
[Close]
BLAST of CsaV3_3G004910 vs. NCBI nr
Match: KGN56106.1 (hypothetical protein Csa_010163 [Cucumis sativus])

HSP 1 Score: 180.3 bits (456), Expect = 7.7e-42
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0 

Query: 1  MILSDLPKKPLNLAGRSPKKFELAELGLKTIWLVKGAMKVVRSGVRETSQIRGSTEKECS 60
          MILSDLPKKPLNLAGRSPKKFELAELGLKTIWLVKGAMKVVRSGVRETSQIRGSTEKECS
Sbjct: 1  MILSDLPKKPLNLAGRSPKKFELAELGLKTIWLVKGAMKVVRSGVRETSQIRGSTEKECS 60

Query: 61 ASIYVVDYWSQWQRIVVVDVGSKSRRRKAE 91
          ASIYVVDYWSQWQRIVVVDVGSKSRRRKAE
Sbjct: 61 ASIYVVDYWSQWQRIVVVDVGSKSRRRKAE 90

[Close]
BLAST of CsaV3_3G004910 vs. ExPASy TrEMBL
Match: A0A0A0L7L3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G073970 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 3.7e-42
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0 

Query: 1  MILSDLPKKPLNLAGRSPKKFELAELGLKTIWLVKGAMKVVRSGVRETSQIRGSTEKECS 60
          MILSDLPKKPLNLAGRSPKKFELAELGLKTIWLVKGAMKVVRSGVRETSQIRGSTEKECS
Sbjct: 1  MILSDLPKKPLNLAGRSPKKFELAELGLKTIWLVKGAMKVVRSGVRETSQIRGSTEKECS 60

Query: 61 ASIYVVDYWSQWQRIVVVDVGSKSRRRKAE 91
          ASIYVVDYWSQWQRIVVVDVGSKSRRRKAE
Sbjct: 61 ASIYVVDYWSQWQRIVVVDVGSKSRRRKAE 90

The following BLAST results are available for this feature:
BLAST of CsaV3_3G004910 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN56106.17.7e-42100.00hypothetical protein Csa_010163 [Cucumis sativus][more]
BLAST of CsaV3_3G004910 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_3G004910 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L7L33.7e-42100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G073970 PE=4 SV=1[more]
BLAST of CsaV3_3G004910 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G004910.1CsaV3_3G004910.1mRNA