CsaV3_3G004630 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G004630
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Protein kinase domain-containing protein
Location	chr3: 3902139 .. 3902426 (+)
RNA-Seq Expression	CsaV3_3G004630
Synteny	CsaV3_3G004630

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ACCACTGTTTTTAGTGCTGGCCGAACTTTCATCGGCGCGAATGCCACCAATACTATCAGTTTCAGATTCACCCCCCAGAACTTCGGCCAAGTCGTCGATCATTCCACCGAGTCTCCAACTCTGTACGATTCCAATAGAATTTTCAAGGACTCATCGTTTTACGAATTCGAAGTCGACCAAGATGTTGTCCATATTGTACGTCTTCATTTCTCCCCTTTCAATTTCTCCACTGATTTATCCACATCCCTTTTCAACGTTTCTGCGGTTTCTCCTTCTACGAAACATTAA

mRNA sequence

ACCACTGTTTTTAGTGCTGGCCGAACTTTCATCGGCGCGAATGCCACCAATACTATCAGTTTCAGATTCACCCCCCAGAACTTCGGCCAAGTCGTCGATCATTCCACCGAGTCTCCAACTCTGTACGATTCCAATAGAATTTTCAAGGACTCATCGTTTTACGAATTCGAAGTCGACCAAGATGTTGTCCATATTGTACGTCTTCATTTCTCCCCTTTCAATTTCTCCACTGATTTATCCACATCCCTTTTCAACGTTTCTGCGGTTTCTCCTTCTACGAAACATTAA

Coding sequence (CDS)

ACCACTGTTTTTAGTGCTGGCCGAACTTTCATCGGCGCGAATGCCACCAATACTATCAGTTTCAGATTCACCCCCCAGAACTTCGGCCAAGTCGTCGATCATTCCACCGAGTCTCCAACTCTGTACGATTCCAATAGAATTTTCAAGGACTCATCGTTTTACGAATTCGAAGTCGACCAAGATGTTGTCCATATTGTACGTCTTCATTTCTCCCCTTTCAATTTCTCCACTGATTTATCCACATCCCTTTTCAACGTTTCTGCGGTTTCTCCTTCTACGAAACATTAA

Protein sequence

TTVFSAGRTFIGANATNTISFRFTPQNFGQVVDHSTESPTLYDSNRIFKDSSFYEFEVDQDVVHIVRLHFSPFNFSTDLSTSLFNVSAVSPSTKH*

Homology

[Close]

BLAST of CsaV3_3G004630 vs. NCBI nr
Match: KAE8650120.1 (hypothetical protein Csa_010248, partial [Cucumis sativus])

HSP 1 Score: 190.3 bits (482), Expect = 7.9e-45
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0


Query: 1  TTVFSAGRTFIGANATNTISFRFTPQNFGQVVDHSTESPTLYDSNRIFKDSSFYEFEVDQ 60
          TTVFSAGRTFIGANATNTISFRFTPQNFGQVVDHSTESPTLYDSNRIFKDSSFYEFEVDQ
Sbjct: 1  TTVFSAGRTFIGANATNTISFRFTPQNFGQVVDHSTESPTLYDSNRIFKDSSFYEFEVDQ 60

Query: 61 DVVHIVRLHFSPFNFSTDLSTSLFNVSAVSPSTKH 96
          DVVHIVRLHFSPFNFSTDLSTSLFNVSAVSPSTKH
Sbjct: 61 DVVHIVRLHFSPFNFSTDLSTSLFNVSAVSPSTKH 95

[Close]

BLAST of CsaV3_3G004630 vs. NCBI nr
Match: XP_008440330.1 (PREDICTED: probable receptor-like protein kinase At2g23200 [Cucumis melo])

HSP 1 Score: 152.5 bits (384), Expect = 1.8e-33
Identity = 79/89 (88.76%), Postives = 81/89 (91.01%), Query Frame = 0


Query: 1   TTVFSAGRTFIG-ANATNTISFRFTPQNFGQVVDHSTESPTLYDSNRIFKDSSFYEFEVD 60
           TTVF+AGRTFIG  N TNTISFRFTPQN  QVVDHSTESP+LYDS RIFKD SFYEFEVD
Sbjct: 43  TTVFNAGRTFIGDLNTTNTISFRFTPQNSDQVVDHSTESPSLYDSIRIFKDPSFYEFEVD 102

Query: 61  QDVVHIVRLHFSPFNFSTDLSTSLFNVSA 89
           QD VHIVRLHFSPFNFSTDLSTSLFNVSA
Sbjct: 103 QDAVHIVRLHFSPFNFSTDLSTSLFNVSA 131

[Close]

BLAST of CsaV3_3G004630 vs. NCBI nr
Match: TYK12854.1 (putative receptor-like protein kinase [Cucumis melo var. makuwa])

HSP 1 Score: 151.8 bits (382), Expect = 3.1e-33
Identity = 78/89 (87.64%), Postives = 81/89 (91.01%), Query Frame = 0


Query: 1   TTVFSAGRTFIG-ANATNTISFRFTPQNFGQVVDHSTESPTLYDSNRIFKDSSFYEFEVD 60
           TTVF+AGRTFIG  N TNTISFRFTPQN  QVVDHSTESP+LYDS RIFKD SFYEFEVD
Sbjct: 43  TTVFNAGRTFIGDLNTTNTISFRFTPQNSDQVVDHSTESPSLYDSIRIFKDPSFYEFEVD 102

Query: 61  QDVVHIVRLHFSPFNFSTDLSTSLFNVSA 89
           QD VHIVRLHFSPFNFSTDLSTS+FNVSA
Sbjct: 103 QDAVHIVRLHFSPFNFSTDLSTSIFNVSA 131

[Close]

BLAST of CsaV3_3G004630 vs. NCBI nr
Match: XP_031742487.1 (probable receptor-like protein kinase At2g23200 [Cucumis sativus])

HSP 1 Score: 148.3 bits (373), Expect = 3.4e-32
Identity = 76/89 (85.39%), Postives = 80/89 (89.89%), Query Frame = 0


Query: 1   TTVFSAGRTFIG-ANATNTISFRFTPQNFGQVVDHSTESPTLYDSNRIFKDSSFYEFEVD 60
           TTVF+AGR+FIG  N TNTISFRF P N GQVVDHSTESP+LYDS RIFKD SFYEFEVD
Sbjct: 96  TTVFNAGRSFIGDLNTTNTISFRFIPHNSGQVVDHSTESPSLYDSIRIFKDPSFYEFEVD 155

Query: 61  QDVVHIVRLHFSPFNFSTDLSTSLFNVSA 89
           QD VHIVRLHFSPFNFSTDLSTS+FNVSA
Sbjct: 156 QDTVHIVRLHFSPFNFSTDLSTSVFNVSA 184

[Close]

BLAST of CsaV3_3G004630 vs. NCBI nr
Match: KAE8647509.1 (hypothetical protein Csa_004282 [Cucumis sativus])

HSP 1 Score: 148.3 bits (373), Expect = 3.4e-32
Identity = 76/89 (85.39%), Postives = 80/89 (89.89%), Query Frame = 0


Query: 1   TTVFSAGRTFIG-ANATNTISFRFTPQNFGQVVDHSTESPTLYDSNRIFKDSSFYEFEVD 60
           TTVF+AGR+FIG  N TNTISFRF P N GQVVDHSTESP+LYDS RIFKD SFYEFEVD
Sbjct: 96  TTVFNAGRSFIGDLNTTNTISFRFIPHNSGQVVDHSTESPSLYDSIRIFKDPSFYEFEVD 155

Query: 61  QDVVHIVRLHFSPFNFSTDLSTSLFNVSA 89
           QD VHIVRLHFSPFNFSTDLSTS+FNVSA
Sbjct: 156 QDTVHIVRLHFSPFNFSTDLSTSVFNVSA 184

[Close]

BLAST of CsaV3_3G004630 vs. ExPASy Swiss-Prot
Match: O22187 (Probable receptor-like protein kinase At2g23200 OS=Arabidopsis thaliana OX=3702 GN=At2g23200 PE=3 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 2.2e-10
Identity = 38/95 (40.00%), Postives = 55/95 (57.89%), Query Frame = 0


Query: 1   TTVFSAGRTFIGANATNTISFRFTPQNFGQVVDHSTESPTLYDSNRIFKDSSFYEFEVDQ 60
           + VF  G+TF+G   ++T S  FT +    + D S+ +P +Y + RIF+  S Y+F++D 
Sbjct: 47  SNVFYGGQTFVGDTNSSTNSVSFTNKGTEVINDQSSVAPEIYRTVRIFRHPSSYKFKLDS 106

Query: 61  DVVHIVRLHFSPFNFSTDLSTSLFNVSAVSPSTKH 96
             +H VRLHFS      DL T+ F VSA S S  H
Sbjct: 107 LGLHFVRLHFSVVFSRADLLTARFTVSATSGSNHH 141

[Close]

BLAST of CsaV3_3G004630 vs. ExPASy TrEMBL
Match: A0A0A0L7J1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G064250 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 3.8e-45
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0


Query: 1   TTVFSAGRTFIGANATNTISFRFTPQNFGQVVDHSTESPTLYDSNRIFKDSSFYEFEVDQ 60
           TTVFSAGRTFIGANATNTISFRFTPQNFGQVVDHSTESPTLYDSNRIFKDSSFYEFEVDQ
Sbjct: 33  TTVFSAGRTFIGANATNTISFRFTPQNFGQVVDHSTESPTLYDSNRIFKDSSFYEFEVDQ 92

Query: 61  DVVHIVRLHFSPFNFSTDLSTSLFNVSAVSPSTKH 96
           DVVHIVRLHFSPFNFSTDLSTSLFNVSAVSPSTKH
Sbjct: 93  DVVHIVRLHFSPFNFSTDLSTSLFNVSAVSPSTKH 127

[Close]

BLAST of CsaV3_3G004630 vs. ExPASy TrEMBL
Match: A0A1S3B0F7 (probable receptor-like protein kinase At2g23200 OS=Cucumis melo OX=3656 GN=LOC103484811 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 8.8e-34
Identity = 79/89 (88.76%), Postives = 81/89 (91.01%), Query Frame = 0


Query: 1   TTVFSAGRTFIG-ANATNTISFRFTPQNFGQVVDHSTESPTLYDSNRIFKDSSFYEFEVD 60
           TTVF+AGRTFIG  N TNTISFRFTPQN  QVVDHSTESP+LYDS RIFKD SFYEFEVD
Sbjct: 43  TTVFNAGRTFIGDLNTTNTISFRFTPQNSDQVVDHSTESPSLYDSIRIFKDPSFYEFEVD 102

Query: 61  QDVVHIVRLHFSPFNFSTDLSTSLFNVSA 89
           QD VHIVRLHFSPFNFSTDLSTSLFNVSA
Sbjct: 103 QDAVHIVRLHFSPFNFSTDLSTSLFNVSA 131

[Close]

BLAST of CsaV3_3G004630 vs. ExPASy TrEMBL
Match: A0A5D3CP87 (Putative receptor-like protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G004460 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 1.5e-33
Identity = 78/89 (87.64%), Postives = 81/89 (91.01%), Query Frame = 0


Query: 1   TTVFSAGRTFIG-ANATNTISFRFTPQNFGQVVDHSTESPTLYDSNRIFKDSSFYEFEVD 60
           TTVF+AGRTFIG  N TNTISFRFTPQN  QVVDHSTESP+LYDS RIFKD SFYEFEVD
Sbjct: 43  TTVFNAGRTFIGDLNTTNTISFRFTPQNSDQVVDHSTESPSLYDSIRIFKDPSFYEFEVD 102

Query: 61  QDVVHIVRLHFSPFNFSTDLSTSLFNVSA 89
           QD VHIVRLHFSPFNFSTDLSTS+FNVSA
Sbjct: 103 QDAVHIVRLHFSPFNFSTDLSTSIFNVSA 131

[Close]

BLAST of CsaV3_3G004630 vs. ExPASy TrEMBL
Match: A0A0A0KIE5 (Protein kinase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G492240 PE=4 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 1.7e-32
Identity = 76/89 (85.39%), Postives = 80/89 (89.89%), Query Frame = 0


Query: 1   TTVFSAGRTFIG-ANATNTISFRFTPQNFGQVVDHSTESPTLYDSNRIFKDSSFYEFEVD 60
           TTVF+AGR+FIG  N TNTISFRF P N GQVVDHSTESP+LYDS RIFKD SFYEFEVD
Sbjct: 96  TTVFNAGRSFIGDLNTTNTISFRFIPHNSGQVVDHSTESPSLYDSIRIFKDPSFYEFEVD 155

Query: 61  QDVVHIVRLHFSPFNFSTDLSTSLFNVSA 89
           QD VHIVRLHFSPFNFSTDLSTS+FNVSA
Sbjct: 156 QDTVHIVRLHFSPFNFSTDLSTSVFNVSA 184

[Close]

BLAST of CsaV3_3G004630 vs. ExPASy TrEMBL
Match: A0A6J1BUC9 (LOW QUALITY PROTEIN: probable receptor-like protein kinase At2g23200 OS=Momordica charantia OX=3673 GN=LOC111005620 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.2e-11
Identity = 44/86 (51.16%), Postives = 52/86 (60.47%), Query Frame = 0


Query: 3   VFSAGRTFIGANATNTISFRFTPQNFGQVVDHSTESPTLYDSNRIFKDSSFYEFEVDQDV 62
           V    R F+G       +F FT    G         P+LYDS RIFK +S Y+FE+ QD 
Sbjct: 80  VLDGARAFVGDLNATANTFTFTS---GNPFHLHNSPPSLYDSVRIFKQNSSYQFEIQQDA 139

Query: 63  VHIVRLHFSPFNFSTDLSTSLFNVSA 89
           VHIVRLHFSP NFST LST+ F+VSA
Sbjct: 140 VHIVRLHFSPSNFSTQLSTAHFDVSA 162

[Close]

BLAST of CsaV3_3G004630 vs. TAIR 10
Match: AT2G23200.1 (Protein kinase superfamily protein )

HSP 1 Score: 66.2 bits (160), Expect = 1.6e-11
Identity = 38/95 (40.00%), Postives = 55/95 (57.89%), Query Frame = 0


Query: 1   TTVFSAGRTFIGANATNTISFRFTPQNFGQVVDHSTESPTLYDSNRIFKDSSFYEFEVDQ 60
           + VF  G+TF+G   ++T S  FT +    + D S+ +P +Y + RIF+  S Y+F++D 
Sbjct: 47  SNVFYGGQTFVGDTNSSTNSVSFTNKGTEVINDQSSVAPEIYRTVRIFRHPSSYKFKLDS 106

Query: 61  DVVHIVRLHFSPFNFSTDLSTSLFNVSAVSPSTKH 96
             +H VRLHFS      DL T+ F VSA S S  H
Sbjct: 107 LGLHFVRLHFSVVFSRADLLTARFTVSATSGSNHH 141

[Close]

BLAST of CsaV3_3G004630 vs. TAIR 10
Match: AT5G24010.1 (Protein kinase superfamily protein )

HSP 1 Score: 43.1 bits (100), Expect = 1.4e-04
Identity = 28/87 (32.18%), Postives = 46/87 (52.87%), Query Frame = 0


Query: 2   TVFSAGRTFIGANATNTISFRFTPQNFG-QVVDHSTESPTLYDSNRIFKDSSFYEFEVDQ 61
           T F   R+F+  ++    SF  T ++      + S +SP LY++ R+F     Y+F+V  
Sbjct: 42  TSFFTTRSFLSDSSEPGSSFLSTDRSISISDTNPSPDSPVLYNTARVFPVGGSYKFQVTT 101

Query: 62  DVVHIVRLHFSPFNFST-DLSTSLFNV 87
              H +RLHF+PF  S  +L ++ F V
Sbjct: 102 KGTHFIRLHFAPFKASRFNLRSAKFRV 128

The following BLAST results are available for this feature:

BLAST of CsaV3_3G004630 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8650120.1	7.9e-45	100.00	hypothetical protein Csa_010248, partial [Cucumis sativus]	[more]
XP_008440330.1	1.8e-33	88.76	PREDICTED: probable receptor-like protein kinase At2g23200 [Cucumis melo]	[more]
TYK12854.1	3.1e-33	87.64	putative receptor-like protein kinase [Cucumis melo var. makuwa]	[more]
XP_031742487.1	3.4e-32	85.39	probable receptor-like protein kinase At2g23200 [Cucumis sativus]	[more]
KAE8647509.1	3.4e-32	85.39	hypothetical protein Csa_004282 [Cucumis sativus]	[more]

BLAST of CsaV3_3G004630 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22187	2.2e-10	40.00	Probable receptor-like protein kinase At2g23200 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of CsaV3_3G004630 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L7J1	3.8e-45	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G064250 PE=4 SV=1	[more]
A0A1S3B0F7	8.8e-34	88.76	probable receptor-like protein kinase At2g23200 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5D3CP87	1.5e-33	87.64	Putative receptor-like protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A0A0KIE5	1.7e-32	85.39	Protein kinase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G492...	[more]
A0A6J1BUC9	1.2e-11	51.16	LOW QUALITY PROTEIN: probable receptor-like protein kinase At2g23200 OS=Momordic...	[more]

BLAST of CsaV3_3G004630 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G23200.1	1.6e-11	40.00	Protein kinase superfamily protein	[more]
AT5G24010.1	1.4e-04	32.18	Protein kinase superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.60.120.430		coord: 1..90 e-value: 8.8E-8 score: 34.1
None	No IPR available	PANTHER	PTHR34590:SF7	SUBFAMILY NOT NAMED	coord: 2..89
None	No IPR available	PANTHER	PTHR34590	OS03G0124300 PROTEIN-RELATED	coord: 2..89

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G004630.1	CsaV3_3G004630.1	mRNA