CsaV3_3G004330 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G004330
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	PSI-G
Location	chr3: 3672341 .. 3673928 (-)
RNA-Seq Expression	CsaV3_3G004330
Synteny	CsaV3_3G004330

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTAAAAGGAAAGAAATGGTAAAAAGAATTTGGATGGAAGAATCCCTAATCCAGAAATAGCCAATCAAATTCATCCAACTCAACTCCCAAAATCTCCCTTCCTCCGATTCTCATCCTCACAATCTATATCGCTTTTCTCAACTAAATTATATGATCCTCACATAGCCTCCCTCAATTATCCACTCCATATCTCTCACACACAACAATATCACCACACCATCAATGGCCGCCGCCGCCTCCTCCTCCGCTGTCTTCGCCGCCCCGACCTTCTCGGCTACCGCCACGAGGCAGCAGCCCAACCCCACCACCATATCGTTCCAAGGCCTCCGTGCGCTCCCCAGCGTGAAATCCAGCCGGTCGGTTGTCGCCACAAAGAGCCGGAGATCGATGACGGTGAAGGCGGAACTCAATCCATCTCTAGTGATAAGCCTAAGCACAGGGCTGTCCTTGTTCTTAGGGAGGTTTGTGTTCTTCAATTTCCAAAGGGAGAATGTGGGCAAGCAAGTGCCAGAGCAAAATGGGCTAACTCATTTTGAGGCTGGTGATGTTAGGGCTAAAGAATATGTTAGCCTCTTGAAATCTAATGATCCTGTTGGGTTTAATATTGTTGATGTTCTTGCTTGGGGTTCAATTGGTCATATTGTTGCTTATTATATCTTGGCTACTTCTAGCAATGGATATGATCCTAAGTTCTTCTAGCTGTTGTTATTACTGTGGCTTTGTATAGCTAAATCCACCATTTATTGCTTTTGAAAAACTTTGCTTTTGTATCTTTCTCTAATGGGGTTTTTGTGGAATGATATTGGGAAAATGGGAAGATGGGGTTTGTGAGTTATGTTGTCTACTGATTATTATTGCAAATGTAACTTTGTTGTTTTGGATGATGAACTCACAATATGAGTGTAGAATTGTTACATTTTTATGGATGTATTAATTAATTACATGATTTTGTGAACATAATTTGCCAATACCTTTTCAAAATTTGCTTCAATGGTCAAGTTGATGAGCGGATTGAAGAAAAATAAGAGGAATGTGGAGGGATGACCTACACACTTATATATTATCTATAACCATTATCAACGAGTAGGAAGTTGAAGACAAAGTCCCTTACATCTTTACAACAATTCGTATAATTTTTCGAAGTAACACATACTACTTAAATTACTTTGGACAAAGTTTTGATGAAGTACCAAACAGAGTAAATTCAAAATAAAGTTAATAACTATTACATGGTTTTATAAAACGAACACAGCAATAGAATTCATTGTAAGCTTTAATTTTCCCTGTAAGTTTGCAAGAAAGAAAGAGAGAGGAGGTTTCTAGTAAAATTATTGAATTGAAATCTCAAACTGAGTCACCGACAGCGTCACCGGAGTTGCGAGCCAAATCAGAGAGGTTGGAGCCGAGGGAGCCACCACGAATCATGGCAGAGCTCCGGTGAGAGCAATAAATTTGGAGTTTTCTTTAGCTCTTCCATGTCGTATTCCGGCAATGCTCCCATTTTTTAACTTTCCGTTTTCCCCTCCGATCTTCCCTCCATTTATCTATAAATAGAAAATAAGAGACTTTGAAATATAATAATATTAAT

mRNA sequence

ATGGCCGCCGCCGCCTCCTCCTCCGCTGTCTTCGCCGCCCCGACCTTCTCGGCTACCGCCACGAGGCAGCAGCCCAACCCCACCACCATATCGTTCCAAGGCCTCCGTGCGCTCCCCAGCGTGAAATCCAGCCGGTCGGTTGTCGCCACAAAGAGCCGGAGATCGATGACGGTGAAGGCGGAACTCAATCCATCTCTAGTGATAAGCCTAAGCACAGGGCTGTCCTTGTTCTTAGGGAGGTTTGTGTTCTTCAATTTCCAAAGGGAGAATGTGGGCAAGCAAGTGCCAGAGCAAAATGGGCTAACTCATTTTGAGGCTGGTGATGTTAGGGCTAAAGAATATGTTAGCCTCTTGAAATCTAATGATCCTGTTGGGTTTAATATTGTTGATGTTCTTGCTTGGGGTTCAATTGGTCATATTGTTGCTTATTATATCTTGGCTACTTCTAGCAATGGATATGATCCTAAGTTCTTCTAG

Coding sequence (CDS)

ATGGCCGCCGCCGCCTCCTCCTCCGCTGTCTTCGCCGCCCCGACCTTCTCGGCTACCGCCACGAGGCAGCAGCCCAACCCCACCACCATATCGTTCCAAGGCCTCCGTGCGCTCCCCAGCGTGAAATCCAGCCGGTCGGTTGTCGCCACAAAGAGCCGGAGATCGATGACGGTGAAGGCGGAACTCAATCCATCTCTAGTGATAAGCCTAAGCACAGGGCTGTCCTTGTTCTTAGGGAGGTTTGTGTTCTTCAATTTCCAAAGGGAGAATGTGGGCAAGCAAGTGCCAGAGCAAAATGGGCTAACTCATTTTGAGGCTGGTGATGTTAGGGCTAAAGAATATGTTAGCCTCTTGAAATCTAATGATCCTGTTGGGTTTAATATTGTTGATGTTCTTGCTTGGGGTTCAATTGGTCATATTGTTGCTTATTATATCTTGGCTACTTCTAGCAATGGATATGATCCTAAGTTCTTCTAG

Protein sequence

MAAAASSSAVFAAPTFSATATRQQPNPTTISFQGLRALPSVKSSRSVVATKSRRSMTVKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVGKQVPEQNGLTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF*

Homology

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BLAST of CsaV3_3G004330 vs. NCBI nr
Match: XP_004149569.1 (photosystem I reaction center subunit V, chloroplastic [Cucumis sativus] >KGN56044.1 hypothetical protein Csa_010215 [Cucumis sativus])

HSP 1 Score: 300.4 bits (768), Expect = 8.9e-78
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MAAAASSSAVFAAPTFSATATRQQPNPTTISFQGLRALPSVKSSRSVVATKSRRSMTVKA 60
           MAAAASSSAVFAAPTFSATATRQQPNPTTISFQGLRALPSVKSSRSVVATKSRRSMTVKA
Sbjct: 1   MAAAASSSAVFAAPTFSATATRQQPNPTTISFQGLRALPSVKSSRSVVATKSRRSMTVKA 60

Query: 61  ELNPSLVISLSTGLSLFLGRFVFFNFQRENVGKQVPEQNGLTHFEAGDVRAKEYVSLLKS 120
           ELNPSLVISLSTGLSLFLGRFVFFNFQRENVGKQVPEQNGLTHFEAGDVRAKEYVSLLKS
Sbjct: 61  ELNPSLVISLSTGLSLFLGRFVFFNFQRENVGKQVPEQNGLTHFEAGDVRAKEYVSLLKS 120

Query: 121 NDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 159
           NDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Sbjct: 121 NDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 158

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BLAST of CsaV3_3G004330 vs. NCBI nr
Match: XP_008449063.1 (PREDICTED: photosystem I reaction center subunit V, chloroplastic [Cucumis melo] >KAA0065757.1 photosystem I reaction center subunit V [Cucumis melo var. makuwa] >TYK13781.1 photosystem I reaction center subunit V [Cucumis melo var. makuwa])

HSP 1 Score: 290.0 bits (741), Expect = 1.2e-74
Identity = 151/156 (96.79%), Postives = 154/156 (98.72%), Query Frame = 0


Query: 3   AAASSSAVFAAPTFSATATRQQPNPTTISFQGLRALPSVKSSRSVVATKSRRSMTVKAEL 62
           AAASSSAVF APTFSATATRQQP+PTTISFQGLRALPSVKSSRS+VATK+RRSMTVKAEL
Sbjct: 2   AAASSSAVFVAPTFSATATRQQPSPTTISFQGLRALPSVKSSRSIVATKTRRSMTVKAEL 61

Query: 63  NPSLVISLSTGLSLFLGRFVFFNFQRENVGKQVPEQNGLTHFEAGDVRAKEYVSLLKSND 122
           NPSLVISLSTGLSLFLGRFVFFNFQRENV KQVPEQNGLTHFEAGDVRAKEYVSLLKSND
Sbjct: 62  NPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGLTHFEAGDVRAKEYVSLLKSND 121

Query: 123 PVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 159
           PVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Sbjct: 122 PVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 157

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BLAST of CsaV3_3G004330 vs. NCBI nr
Match: XP_038903014.1 (photosystem I reaction center subunit V, chloroplastic [Benincasa hispida])

HSP 1 Score: 279.3 bits (713), Expect = 2.1e-71
Identity = 146/158 (92.41%), Postives = 149/158 (94.30%), Query Frame = 0


Query: 1   MAAAASSSAVFAAPTFSATATRQQPNPTTISFQGLRALPSVKSSRSVVATKSRRSMTVKA 60
           MA AASSSA+FAAPTFSA ATRQQP PT +SFQGLRALPSVKSSR  VA KSRRS+ VKA
Sbjct: 1   MATAASSSAIFAAPTFSAAATRQQPTPTAVSFQGLRALPSVKSSRPGVAIKSRRSVVVKA 60

Query: 61  ELNPSLVISLSTGLSLFLGRFVFFNFQRENVGKQVPEQNGLTHFEAGDVRAKEYVSLLKS 120
           ELNPSLVISLSTGLSLFLGRFVFFNFQRENV KQVPEQNGLTHFEAGDVRAKEYVSLLKS
Sbjct: 61  ELNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGLTHFEAGDVRAKEYVSLLKS 120

Query: 121 NDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 159
           NDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Sbjct: 121 NDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 158

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BLAST of CsaV3_3G004330 vs. NCBI nr
Match: XP_023005588.1 (photosystem I reaction center subunit V, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 266.9 bits (681), Expect = 1.1e-67
Identity = 138/158 (87.34%), Postives = 146/158 (92.41%), Query Frame = 0


Query: 1   MAAAASSSAVFAAPTFSATATRQQPNPTTISFQGLRALPSVKSSRSVVATKSRRSMTVKA 60
           MAA ASSSAVFAA +FSA   RQQPNP+TIS+QGLR LP +KSSRS+ A KS RS+ VKA
Sbjct: 1   MAAVASSSAVFAASSFSAAVRRQQPNPSTISYQGLRPLPGIKSSRSLAAVKSPRSLVVKA 60

Query: 61  ELNPSLVISLSTGLSLFLGRFVFFNFQRENVGKQVPEQNGLTHFEAGDVRAKEYVSLLKS 120
           ELNPS+VISLSTGLSLFLGRFVFFNFQRENV KQVPEQNG+THFEAGDVRAKEYVSLLKS
Sbjct: 61  ELNPSVVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGVTHFEAGDVRAKEYVSLLKS 120

Query: 121 NDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 159
           NDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Sbjct: 121 NDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 158

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BLAST of CsaV3_3G004330 vs. NCBI nr
Match: XP_022934047.1 (photosystem I reaction center subunit V, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 266.5 bits (680), Expect = 1.4e-67
Identity = 138/158 (87.34%), Postives = 147/158 (93.04%), Query Frame = 0


Query: 1   MAAAASSSAVFAAPTFSATATRQQPNPTTISFQGLRALPSVKSSRSVVATKSRRSMTVKA 60
           MAAAASSSAVFAA +FSA+  RQQPNP+TIS+QGLR LP +KSSRS+   KS RS+ VKA
Sbjct: 1   MAAAASSSAVFAASSFSASVGRQQPNPSTISYQGLRPLPGIKSSRSLAGVKSPRSVVVKA 60

Query: 61  ELNPSLVISLSTGLSLFLGRFVFFNFQRENVGKQVPEQNGLTHFEAGDVRAKEYVSLLKS 120
           ELNPS+VISLSTGLSLFLGRFVFFNFQRENV KQVPEQNG+THFEAGDVRAKEYVSLLKS
Sbjct: 61  ELNPSVVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGVTHFEAGDVRAKEYVSLLKS 120

Query: 121 NDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 159
           NDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Sbjct: 121 NDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 158

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BLAST of CsaV3_3G004330 vs. ExPASy Swiss-Prot
Match: P12357 (Photosystem I reaction center subunit V, chloroplastic OS=Spinacia oleracea OX=3562 GN=PSAG PE=1 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 8.7e-52
Identity = 116/165 (70.30%), Postives = 127/165 (76.97%), Query Frame = 0


Query: 2   AAAASSSAVFAAPTFSATATRQQPNP----TTISFQGLRAL----PSVKSSRSVVATKSR 61
           AA AS S+   AP  S     QQ +        SF GLR L     S  SS S+  + +R
Sbjct: 3   AATASLSSTLLAPCSSKQPQPQQQHQHQQLKCKSFSGLRPLKLNISSNNSSSSLSMSSAR 62

Query: 62  RSMTVKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVGKQVPEQNGLTHFEAGDVRAKE 121
           RSMT +AEL+PSLVISLSTGLSLFLGRFVFFNFQREN+ KQVPEQNG++HFEAGD RAKE
Sbjct: 63  RSMTCRAELSPSLVISLSTGLSLFLGRFVFFNFQRENMAKQVPEQNGMSHFEAGDTRAKE 122

Query: 122 YVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 159
           YVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILAT+SNGYDP FF
Sbjct: 123 YVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATASNGYDPSFF 167

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BLAST of CsaV3_3G004330 vs. ExPASy Swiss-Prot
Match: Q9S7N7 (Photosystem I reaction center subunit V, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSAG PE=1 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 1.3e-50
Identity = 113/160 (70.62%), Postives = 130/160 (81.25%), Query Frame = 0


Query: 4   AASSSAVFAAPTFSATATRQQPNPTTISFQGLRALPSVKSSRSV--VATKSRRSMT--VK 63
           A S+SA+ +  TFS   + +  NP +ISF GLR L    SS ++  ++T  R+S +  V+
Sbjct: 2   ATSASALLSPTTFSTAISHK--NPNSISFHGLRPLRLGGSSSALPKLSTTGRKSSSAVVR 61

Query: 64  AELNPSLVISLSTGLSLFLGRFVFFNFQRENVGKQ-VPEQNGLTHFEAGDVRAKEYVSLL 123
           AEL+PS+VISLSTGLSLFLGRFVFFNFQRENV KQ +PEQNG THFEAGD RAKEYVSLL
Sbjct: 62  AELSPSIVISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQNGKTHFEAGDDRAKEYVSLL 121

Query: 124 KSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 159
           KSNDP+GFNIVDVLAWGSIGHIVAYYILATSSNGYDP FF
Sbjct: 122 KSNDPIGFNIVDVLAWGSIGHIVAYYILATSSNGYDPSFF 159

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BLAST of CsaV3_3G004330 vs. ExPASy Swiss-Prot
Match: Q00327 (Photosystem I reaction center subunit V, chloroplastic OS=Hordeum vulgare OX=4513 GN=PSAG PE=1 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 5.0e-47
Identity = 98/143 (68.53%), Postives = 115/143 (80.42%), Query Frame = 0


Query: 18  ATATRQQPNPTTISFQGLRALPSVKSSRSV--VATKSRRSMTVKAELNPSLVISLSTGLS 77
           AT+T    +P  ++  GLR  PS +++ S   V+  +RRS+  +A L PS+VISLSTGLS
Sbjct: 2   ATSTAAVLSPPAVA--GLRLAPSPRAAASFRGVSPPARRSVAARAALEPSVVISLSTGLS 61

Query: 78  LFLGRFVFFNFQRENVGKQVPEQNGLTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWG 137
           L +GRFVFFNFQRENV KQVPEQNG THFEAGD RAKE+  +LKSNDPVGFN+VDVLAWG
Sbjct: 62  LVMGRFVFFNFQRENVAKQVPEQNGKTHFEAGDERAKEFAGILKSNDPVGFNLVDVLAWG 121

Query: 138 SIGHIVAYYILATSSNGYDPKFF 159
           SIGHIVAYYILAT+SNGYDP FF
Sbjct: 122 SIGHIVAYYILATTSNGYDPPFF 142

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BLAST of CsaV3_3G004330 vs. ExPASy Swiss-Prot
Match: Q9SPM4 (Photosystem I reaction center subunit V, chloroplastic OS=Syntrichia ruralis OX=38588 GN=PSAG PE=3 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 3.4e-19
Identity = 47/93 (50.54%), Postives = 63/93 (67.74%), Query Frame = 0


Query: 63  NPSLVISLSTGLSLFLGRFVFFNFQRENVGKQ-VPEQNGLTHFEAGDVRAKEYVSLLKSN 122
           N S +IS ST   L LGRFVF  FQR  V +  +PEQNG+          + + S+LK+N
Sbjct: 17  NTSFIISASTAALLALGRFVFLPFQRSMVSRHGLPEQNGVPTTRRVTAVRRRWWSMLKTN 76

Query: 123 DPVGFNIVDVLAWGSIGHIVAYYILATSSNGYD 155
           DP GF +VDVLAWG++GH V ++ILAT++NGY+
Sbjct: 77  DPAGFTLVDVLAWGALGHAVGFFILATATNGYN 109

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BLAST of CsaV3_3G004330 vs. ExPASy Swiss-Prot
Match: P14224 (Photosystem I reaction center subunit V, chloroplastic OS=Chlamydomonas reinhardtii OX=3055 GN=PSAG PE=1 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 3.3e-14
Identity = 48/122 (39.34%), Postives = 74/122 (60.66%), Query Frame = 0


Query: 33  QGLRALPSVKSSRSVVATKSRR-SMTVKAELNPSLVISLSTGLSLFLGRFVFFNFQRE-- 92
           Q L + PS+++S  V   ++ R ++  KA L+P +VIS ST   L +GRFVF  +QR   
Sbjct: 2   QTLASRPSLRASARVAPRRAPRVAVVTKAALDPQIVISGSTAAFLAIGRFVFLGYQRREA 61

Query: 93  NVGKQV-PEQNGLTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILAT 151
           N    V P+  G T+F+  D++     ++  +NDP GFNI+DV  WG++GH V + +LA 
Sbjct: 62  NFDSTVGPKTTGATYFD--DLQKNS--TIFATNDPAGFNIIDVAGWGALGHAVGFAVLAI 119

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BLAST of CsaV3_3G004330 vs. ExPASy TrEMBL
Match: A0A0A0L4W3 (PSI-G OS=Cucumis sativus OX=3659 GN=Csa_3G060980 PE=3 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 4.3e-78
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MAAAASSSAVFAAPTFSATATRQQPNPTTISFQGLRALPSVKSSRSVVATKSRRSMTVKA 60
           MAAAASSSAVFAAPTFSATATRQQPNPTTISFQGLRALPSVKSSRSVVATKSRRSMTVKA
Sbjct: 1   MAAAASSSAVFAAPTFSATATRQQPNPTTISFQGLRALPSVKSSRSVVATKSRRSMTVKA 60

Query: 61  ELNPSLVISLSTGLSLFLGRFVFFNFQRENVGKQVPEQNGLTHFEAGDVRAKEYVSLLKS 120
           ELNPSLVISLSTGLSLFLGRFVFFNFQRENVGKQVPEQNGLTHFEAGDVRAKEYVSLLKS
Sbjct: 61  ELNPSLVISLSTGLSLFLGRFVFFNFQRENVGKQVPEQNGLTHFEAGDVRAKEYVSLLKS 120

Query: 121 NDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 159
           NDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Sbjct: 121 NDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 158

[Close]

BLAST of CsaV3_3G004330 vs. ExPASy TrEMBL
Match: A0A5D3CPR0 (PSI-G OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold488G00430 PE=3 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 5.8e-75
Identity = 151/156 (96.79%), Postives = 154/156 (98.72%), Query Frame = 0


Query: 3   AAASSSAVFAAPTFSATATRQQPNPTTISFQGLRALPSVKSSRSVVATKSRRSMTVKAEL 62
           AAASSSAVF APTFSATATRQQP+PTTISFQGLRALPSVKSSRS+VATK+RRSMTVKAEL
Sbjct: 2   AAASSSAVFVAPTFSATATRQQPSPTTISFQGLRALPSVKSSRSIVATKTRRSMTVKAEL 61

Query: 63  NPSLVISLSTGLSLFLGRFVFFNFQRENVGKQVPEQNGLTHFEAGDVRAKEYVSLLKSND 122
           NPSLVISLSTGLSLFLGRFVFFNFQRENV KQVPEQNGLTHFEAGDVRAKEYVSLLKSND
Sbjct: 62  NPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGLTHFEAGDVRAKEYVSLLKSND 121

Query: 123 PVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 159
           PVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Sbjct: 122 PVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 157

[Close]

BLAST of CsaV3_3G004330 vs. ExPASy TrEMBL
Match: A0A1S3BKK6 (PSI-G OS=Cucumis melo OX=3656 GN=LOC103491045 PE=3 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 5.8e-75
Identity = 151/156 (96.79%), Postives = 154/156 (98.72%), Query Frame = 0


Query: 3   AAASSSAVFAAPTFSATATRQQPNPTTISFQGLRALPSVKSSRSVVATKSRRSMTVKAEL 62
           AAASSSAVF APTFSATATRQQP+PTTISFQGLRALPSVKSSRS+VATK+RRSMTVKAEL
Sbjct: 2   AAASSSAVFVAPTFSATATRQQPSPTTISFQGLRALPSVKSSRSIVATKTRRSMTVKAEL 61

Query: 63  NPSLVISLSTGLSLFLGRFVFFNFQRENVGKQVPEQNGLTHFEAGDVRAKEYVSLLKSND 122
           NPSLVISLSTGLSLFLGRFVFFNFQRENV KQVPEQNGLTHFEAGDVRAKEYVSLLKSND
Sbjct: 62  NPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGLTHFEAGDVRAKEYVSLLKSND 121

Query: 123 PVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 159
           PVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Sbjct: 122 PVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 157

[Close]

BLAST of CsaV3_3G004330 vs. ExPASy TrEMBL
Match: A0A6J1L2L3 (PSI-G OS=Cucurbita maxima OX=3661 GN=LOC111498528 PE=3 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 5.3e-68
Identity = 138/158 (87.34%), Postives = 146/158 (92.41%), Query Frame = 0


Query: 1   MAAAASSSAVFAAPTFSATATRQQPNPTTISFQGLRALPSVKSSRSVVATKSRRSMTVKA 60
           MAA ASSSAVFAA +FSA   RQQPNP+TIS+QGLR LP +KSSRS+ A KS RS+ VKA
Sbjct: 1   MAAVASSSAVFAASSFSAAVRRQQPNPSTISYQGLRPLPGIKSSRSLAAVKSPRSLVVKA 60

Query: 61  ELNPSLVISLSTGLSLFLGRFVFFNFQRENVGKQVPEQNGLTHFEAGDVRAKEYVSLLKS 120
           ELNPS+VISLSTGLSLFLGRFVFFNFQRENV KQVPEQNG+THFEAGDVRAKEYVSLLKS
Sbjct: 61  ELNPSVVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGVTHFEAGDVRAKEYVSLLKS 120

Query: 121 NDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 159
           NDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Sbjct: 121 NDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 158

[Close]

BLAST of CsaV3_3G004330 vs. ExPASy TrEMBL
Match: A0A6J1F1K2 (PSI-G OS=Cucurbita moschata OX=3662 GN=LOC111441287 PE=3 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 6.9e-68
Identity = 138/158 (87.34%), Postives = 147/158 (93.04%), Query Frame = 0


Query: 1   MAAAASSSAVFAAPTFSATATRQQPNPTTISFQGLRALPSVKSSRSVVATKSRRSMTVKA 60
           MAAAASSSAVFAA +FSA+  RQQPNP+TIS+QGLR LP +KSSRS+   KS RS+ VKA
Sbjct: 1   MAAAASSSAVFAASSFSASVGRQQPNPSTISYQGLRPLPGIKSSRSLAGVKSPRSVVVKA 60

Query: 61  ELNPSLVISLSTGLSLFLGRFVFFNFQRENVGKQVPEQNGLTHFEAGDVRAKEYVSLLKS 120
           ELNPS+VISLSTGLSLFLGRFVFFNFQRENV KQVPEQNG+THFEAGDVRAKEYVSLLKS
Sbjct: 61  ELNPSVVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGVTHFEAGDVRAKEYVSLLKS 120

Query: 121 NDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 159
           NDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Sbjct: 121 NDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 158

[Close]

BLAST of CsaV3_3G004330 vs. TAIR 10
Match: AT1G55670.1 (photosystem I subunit G )

HSP 1 Score: 200.7 bits (509), Expect = 9.0e-52
Identity = 113/160 (70.62%), Postives = 130/160 (81.25%), Query Frame = 0


Query: 4   AASSSAVFAAPTFSATATRQQPNPTTISFQGLRALPSVKSSRSV--VATKSRRSMT--VK 63
           A S+SA+ +  TFS   + +  NP +ISF GLR L    SS ++  ++T  R+S +  V+
Sbjct: 2   ATSASALLSPTTFSTAISHK--NPNSISFHGLRPLRLGGSSSALPKLSTTGRKSSSAVVR 61

Query: 64  AELNPSLVISLSTGLSLFLGRFVFFNFQRENVGKQ-VPEQNGLTHFEAGDVRAKEYVSLL 123
           AEL+PS+VISLSTGLSLFLGRFVFFNFQRENV KQ +PEQNG THFEAGD RAKEYVSLL
Sbjct: 62  AELSPSIVISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQNGKTHFEAGDDRAKEYVSLL 121

Query: 124 KSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 159
           KSNDP+GFNIVDVLAWGSIGHIVAYYILATSSNGYDP FF
Sbjct: 122 KSNDPIGFNIVDVLAWGSIGHIVAYYILATSSNGYDPSFF 159

The following BLAST results are available for this feature:

BLAST of CsaV3_3G004330 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004149569.1	8.9e-78	100.00	photosystem I reaction center subunit V, chloroplastic [Cucumis sativus] >KGN560...	[more]
XP_008449063.1	1.2e-74	96.79	PREDICTED: photosystem I reaction center subunit V, chloroplastic [Cucumis melo]...	[more]
XP_038903014.1	2.1e-71	92.41	photosystem I reaction center subunit V, chloroplastic [Benincasa hispida]	[more]
XP_023005588.1	1.1e-67	87.34	photosystem I reaction center subunit V, chloroplastic-like [Cucurbita maxima]	[more]
XP_022934047.1	1.4e-67	87.34	photosystem I reaction center subunit V, chloroplastic-like [Cucurbita moschata]	[more]

BLAST of CsaV3_3G004330 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P12357	8.7e-52	70.30	Photosystem I reaction center subunit V, chloroplastic OS=Spinacia oleracea OX=3...	[more]
Q9S7N7	1.3e-50	70.63	Photosystem I reaction center subunit V, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q00327	5.0e-47	68.53	Photosystem I reaction center subunit V, chloroplastic OS=Hordeum vulgare OX=451...	[more]
Q9SPM4	3.4e-19	50.54	Photosystem I reaction center subunit V, chloroplastic OS=Syntrichia ruralis OX=...	[more]
P14224	3.3e-14	39.34	Photosystem I reaction center subunit V, chloroplastic OS=Chlamydomonas reinhard...	[more]

BLAST of CsaV3_3G004330 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L4W3	4.3e-78	100.00	PSI-G OS=Cucumis sativus OX=3659 GN=Csa_3G060980 PE=3 SV=1	[more]
A0A5D3CPR0	5.8e-75	96.79	PSI-G OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold488G00430 PE=3 SV=...	[more]
A0A1S3BKK6	5.8e-75	96.79	PSI-G OS=Cucumis melo OX=3656 GN=LOC103491045 PE=3 SV=1	[more]
A0A6J1L2L3	5.3e-68	87.34	PSI-G OS=Cucurbita maxima OX=3661 GN=LOC111498528 PE=3 SV=1	[more]
A0A6J1F1K2	6.9e-68	87.34	PSI-G OS=Cucurbita moschata OX=3662 GN=LOC111441287 PE=3 SV=1	[more]

BLAST of CsaV3_3G004330 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G55670.1	9.0e-52	70.63	photosystem I subunit G	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000549	Photosystem I PsaG/PsaK protein	PFAM	PF01241	PSI_PSAK	coord: 64..153 e-value: 2.2E-22 score: 78.9
IPR000549	Photosystem I PsaG/PsaK protein	PROSITE	PS01026	PHOTOSYSTEM_I_PSAGK	coord: 125..142
IPR016370	Photosystem I PsaG/PsaK, plant	PIRSF	PIRSF002912	PsaK	coord: 1..158 e-value: 3.3E-67 score: 223.0
IPR016370	Photosystem I PsaG/PsaK, plant	PANTHER	PTHR34195	PHOTOSYSTEM I REACTION CENTER SUBUNIT V, CHLOROPLASTIC-RELATED	coord: 10..158
IPR017494	Photosystem I PsaG, plant	TIGRFAM	TIGR03051	TIGR03051	coord: 67..154 e-value: 1.5E-42 score: 142.0
IPR023618	Photosystem I PsaG/PsaK domain, chloroplastic	GENE3D	1.10.286.40		coord: 64..158 e-value: 6.6E-48 score: 163.1
None	No IPR available	PANTHER	PTHR34195:SF1	PHOTOSYSTEM I REACTION CENTER SUBUNIT V, CHLOROPLASTIC	coord: 10..158

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G004330.1	CsaV3_3G004330.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015979	photosynthesis
cellular_component	GO:0016020	membrane
cellular_component	GO:0009522	photosystem I