CsaV3_3G003420 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TTCATAAGTCGAAAGATTTGGTTTATTTTTGTTTTCGTTCTCGTTCTCTTTAATAATAATAATAACAATATTTTTACGAATGCTATTTTGTGTAGGGCAATAGAAGAACATAGACCTTCGAAGCTTGAAAGAAATACACTGATTGTTGTTCATGGAGGTCGGCCCTAAGGTTAGTGGAGAAGCTGTGATCGAAAAGCTCAAGGATGACGGCGACTTCGACAAACTCCGTCTCAAAATCATTCGCAAGCTGAAAGACAATGTATTCTCGTTTTCCTATTTTATTTCCTTCCTCATTTCCTCTGTTTCCTAGGTTTTTGTTCTATAGCTTTCGCTATTCATTCAATTTTTCGCTTAATAGTTTCGCTAATTTTATTCATCCAGTTGTAATTACTGATCAATCGTATGAAATTCTTATGATAGAGAATGAAACTTTGCCGAAAGAGGGATTTGCTGATTCATTTGACCTATTCCTTCTTTCATTCTTCTCATTCCAAATGAACTATATTTGTCTAGGGTTTTAACGGAGAAAAATTGGAGAAATTTGACTTCACTTAGTGGTAGTATTAATGGAAGTTCCAAGAATGTTGGCATAGTTGTTGAATTTTGGATTCTTATAGAAAAGTATGTTTAATTATAGGAAGAATTGCGCAATAATATTGTTGCAATAGTGAAGCAATCGGCAGCACTTAATCGGGCAGGAACTGAAAATGTGAAGCCTCGGCAAATTTCTGATGCGATATATGATGAGGTTGGGTAAGACCAAATTGCTGTCATCTCATGTTCTTATTTGTTTCCTTTGGCATTAGTTATATTATCGTTATTGTGAATTTTGTTTAGCTTCTTTAGTTAAAGTAGGCTATGGAGATGGGATGATGACTGCTGCTTTTGTGCTGTGATAATTAAATTTGGATGGGATAGAATTGGTCGACTTTGTTACAATGGGAGTTGAAAGTTTCATCCCAGCCAGATGAAGTAATTGTTTCACATTAAGACACTTCTCACTATGAAATTCTATAAAACCCCATAACCATTATTTACTCAAGTTATTATTTGAGGGATGTTGGAATGAGTGAGGAATCGAGGGTAGAACAGAAATTGGATTGTGGAGTGTGAAAATGGGTTAGGTTGAAAACTGTGAGCATAGAATGAGTTTGGTATTACAAATCAAGCTCAAAACAGTCAATCCAAACTTGAGCTTTTGATTCCATTCCACTACAAACTTATTCTATTGCAGGCCCCCAGACAACCTATAGTGTTTAGAGGTGCAAATCCTTTTGAGGTTCGGTCCTTGGTGAGATTCCATGCCTCTCTATGGGCTTCGGTTTCAAAGACAAATTACAAACCAAATTACAAAAAATCGGAAAACTCTAAATATTACTCGAACAAATTCATTTGTATATATCTTTTAACAAAATACTCAAGTGTTATTCAACCGATCAACAAGCCAAAGCAACCAAACTATTCCCACCAAGCTAAGAAAACACGTCCAAAAACGAATTTTGAGAAGTGCACTAATTCATCCTTCACGACTCAATGGATTAATCCATTACATCGATACTGCTTATTAAACCACCAATTCATCCAAAAGCTTAAGCTAGTGTTTGAAGACTAATTTAATTATATATCACCAACACTCCCCCTCACTTGTGAACTTGAAATATTTGAAAGGTCCAACAAGTGGAATCAATTTTACCTCACTTTTTTGGTTTGAAATATTTGAAAGGTCCAACAAGTGGAAATTGATTTTAATTAGAGAGGAAACGACAATGTAGGGGCTTGAACATAGGACCTCCTTGGACCACCTGCACTGATACCATATTAAACCACCAATTCACCTAAAAGCTTAAGCTAGTGGTTGAAGGCAAATTTAATTATATATCACCAACACTGCCAAGGTCAATATCAGAGACATCGTATCCTTCATATTTCCAAAGTGCATCGTCTTTTTCTTTTTGACTGTATTGGTCCAAAAGATAGAGAAATATACACCCTTGAGTCTGACTATTTCTCAAATTTTCCATTAACTAAACTAACTTCATAATCTGAGTGGATGAATGACCTAAGTTATTTATGCCTTAGACCAAAATACGTTGGATACCTTTGTTTGCTGGCATGTGTTTCTATAGAATTTTAGGATCAGTTAGTCTTATCTAGTGCTGAATTAGTTGGATAAGCATCAAGAGACATAATTGTTAAGAAGGATGCAAGATAGGTCAATTTTCTTATACAATTTACCAATATATCGCTGTTTCCCCCCTTTAATAGTTTATACCAAAATGATCTTCTGAAGAAAATTAAAGTCTCCATTCGGAGATAGAAGGTAATAATGTATTTTCCTTGTCTTTAGGGAAGAAATAATGAGCAAGGTTTCTGATAACTTATGGGAGATCATCAGATCAGCTGATGGCATGAAAAATGAAATCACAGAAACGGTGCAATCTGTCTACAATAAGTTAGCGAACCCAAAAGCGGAGGAAAATGCCGAAGCATCTACCCACCATGCGATACCAGCTCGGAAGGAAGGTGATAATAATGGTTCTATGAAGGCCTCCACCAGTCAATTAGAACATTCCGAGGCTGATCCGGTAGAACCTCCCGGTTTTTCTTTTGCTGGTAATCATACAAACAATGGAAGGCAGCACATAGAGGATCTGCAATTTCCGAAACATCATGAAGGAAGACACAATAACGATAGTCGAAACGTAGAGGGACATAATCCAAACAATGTGTCTGATGCAGATAATGTTGATCTGCCGCCAGGCTTTGTTTCAAACAGGAAGCACAACCAAATGTTTAAAGATGCTGGTAGTGATGATGATGAAGACCCGGATGTTCCTCCTGGTTTCGGTTGAAGAACTAGATTTTTACTTTGGTTTTCTTCTTATAATGCCATCACCAGTTTTGAGCATACAGCAACAAGTTTTTGACCAAATCTCGTGCTGCTACGCGATGAACAAAGTCGTGATTGATCGACTGATCATCTGTCTCTCATGGTTTGTAATGGATGCAGGTGATGGTTATAATGTATAAAGTCTGAGTTCCATGTCGATTGAATTGTAAAACACTACATTGAAGAATAGAATGTAGTTCATGTATAAGGGGTATAAGATGTTTGATAGAAATATCAAACCATACGAGATGTTTTCGCTATCCTAAATTACTGTGCATTTTCCTTGAACTTAAAACTGATAGCATAAAAAATCATAATATTTTCTTGATTTTTAAGCAAAACAGACTCACAAATTTTTAATTGGATTAGTAGTTTATTGTTGAAGGCAATTTACAGATTTAGTTGTTTAAGTGTGAGGTTTATTTGATTTGTTGTATTCTATAAACAATACTTTTG ATGCGATATATGATGAGGGAAGAAATAATGAGCAAGGTTTCTGATAACTTATGGGAGATCATCAGATCAGCTGATGGCATGAAAAATGAAATCACAGAAACGGTGCAATCTGTCTACAATAAGTTAGCGAACCCAAAAGCGGAGGAAAATGCCGAAGCATCTACCCACCATGCGATACCAGCTCGGAAGGAAGGTGATAATAATGGTTCTATGAAGGCCTCCACCAGTCAATTAGAACATTCCGAGGCTGATCCGGTAGAACCTCCCGGTTTTTCTTTTGCTGGTAATCATACAAACAATGGAAGGCAGCACATAGAGGATCTGCAATTTCCGAAACATCATGAAGGAAGACACAATAACGATAGTCGAAACGTAGAGGGACATAATCCAAACAATGTGTCTGATGCAGATAATGTTGATCTGCCGCCAGGCTTTGTTTCAAACAGGAAGCACAACCAAATGTTTAAAGATGCTGGTAGTGATGATGATGAAGACCCGGATGTTCCTCCTGGTTTCGGTTGA ATGCGATATATGATGAGGGAAGAAATAATGAGCAAGGTTTCTGATAACTTATGGGAGATCATCAGATCAGCTGATGGCATGAAAAATGAAATCACAGAAACGGTGCAATCTGTCTACAATAAGTTAGCGAACCCAAAAGCGGAGGAAAATGCCGAAGCATCTACCCACCATGCGATACCAGCTCGGAAGGAAGGTGATAATAATGGTTCTATGAAGGCCTCCACCAGTCAATTAGAACATTCCGAGGCTGATCCGGTAGAACCTCCCGGTTTTTCTTTTGCTGGTAATCATACAAACAATGGAAGGCAGCACATAGAGGATCTGCAATTTCCGAAACATCATGAAGGAAGACACAATAACGATAGTCGAAACGTAGAGGGACATAATCCAAACAATGTGTCTGATGCAGATAATGTTGATCTGCCGCCAGGCTTTGTTTCAAACAGGAAGCACAACCAAATGTTTAAAGATGCTGGTAGTGATGATGATGAAGACCCGGATGTTCCTCCTGGTTTCGGTTGA MRYMMREEIMSKVSDNLWEIIRSADGMKNEITETVQSVYNKLANPKAEENAEASTHHAIPARKEGDNNGSMKASTSQLEHSEADPVEPPGFSFAGNHTNNGRQHIEDLQFPKHHEGRHNNDSRNVEGHNPNNVSDADNVDLPPGFVSNRKHNQMFKDAGSDDDEDPDVPPGFG* Homology
BLAST of CsaV3_3G003420 vs. NCBI nr
Match: KAE8650081.1 (hypothetical protein Csa_010652 [Cucumis sativus]) HSP 1 Score: 349.4 bits (895), Expect = 1.8e-92 Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0
BLAST of CsaV3_3G003420 vs. NCBI nr
Match: XP_004147961.1 (uncharacterized protein LOC101206797 [Cucumis sativus]) HSP 1 Score: 337.8 bits (865), Expect = 5.5e-89 Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0
BLAST of CsaV3_3G003420 vs. NCBI nr
Match: XP_008448942.1 (PREDICTED: uncharacterized protein LOC103490958 [Cucumis melo]) HSP 1 Score: 299.7 bits (766), Expect = 1.7e-77 Identity = 151/167 (90.42%), Postives = 155/167 (92.81%), Query Frame = 0
BLAST of CsaV3_3G003420 vs. NCBI nr
Match: TYK19455.1 (uncharacterized protein E5676_scaffold443G001080 [Cucumis melo var. makuwa]) HSP 1 Score: 294.3 bits (752), Expect = 7.0e-76 Identity = 148/164 (90.24%), Postives = 152/164 (92.68%), Query Frame = 0
BLAST of CsaV3_3G003420 vs. NCBI nr
Match: XP_038903340.1 (uncharacterized protein LOC120089960 [Benincasa hispida]) HSP 1 Score: 293.1 bits (749), Expect = 1.6e-75 Identity = 149/167 (89.22%), Postives = 156/167 (93.41%), Query Frame = 0
BLAST of CsaV3_3G003420 vs. ExPASy TrEMBL
Match: A0A0A0L4H3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G038130 PE=4 SV=1) HSP 1 Score: 337.8 bits (865), Expect = 2.7e-89 Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0
BLAST of CsaV3_3G003420 vs. ExPASy TrEMBL
Match: A0A1S3BKW9 (uncharacterized protein LOC103490958 OS=Cucumis melo OX=3656 GN=LOC103490958 PE=4 SV=1) HSP 1 Score: 299.7 bits (766), Expect = 8.1e-78 Identity = 151/167 (90.42%), Postives = 155/167 (92.81%), Query Frame = 0
BLAST of CsaV3_3G003420 vs. ExPASy TrEMBL
Match: A0A5D3D7E4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold443G001080 PE=4 SV=1) HSP 1 Score: 294.3 bits (752), Expect = 3.4e-76 Identity = 148/164 (90.24%), Postives = 152/164 (92.68%), Query Frame = 0
BLAST of CsaV3_3G003420 vs. ExPASy TrEMBL
Match: A0A6J1DEX6 (uncharacterized protein LOC111020416 OS=Momordica charantia OX=3673 GN=LOC111020416 PE=4 SV=1) HSP 1 Score: 241.9 bits (616), Expect = 2.0e-60 Identity = 126/167 (75.45%), Postives = 138/167 (82.63%), Query Frame = 0
BLAST of CsaV3_3G003420 vs. ExPASy TrEMBL
Match: A0A6J1FJ59 (uncharacterized protein LOC111446176 OS=Cucurbita moschata OX=3662 GN=LOC111446176 PE=4 SV=1) HSP 1 Score: 221.5 bits (563), Expect = 2.8e-54 Identity = 118/167 (70.66%), Postives = 135/167 (80.84%), Query Frame = 0
BLAST of CsaV3_3G003420 vs. TAIR 10
Match: AT1G12530.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G56420.1); Has 54 Blast hits to 53 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 60.5 bits (145), Expect = 1.6e-09 Identity = 50/166 (30.12%), Postives = 76/166 (45.78%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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