CsaV3_3G002450 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ACTGGCATTGCTGTTCTCTTTTTGGAATTTAAACATTGCCATTTGCTGTTTTGTGTGAGCGGGCTGCATGTTGATGAAATGAGAGAAATATGAAAGAATATATAGATTTTTCTTTTGGGGTCAATTTCGTTATGAATTTTAATTAATGGTGGGCTTTTTCGTAGTTTATTTTGATAAAGATGGAATGCCCGTGCTATTAGAATCAGGGGTACTTTTGAATCGATCCTTTTCTTTCCATTCCCTTCAAACAATGTTTTGTTTCTTGGTTGTGGAATTATGTAGAAGCTTTCTGGTTGTTTTCTTCTTTCTTGTTTTTATTGGCAATATTATTCTCTTTCTGGAAATGGAACAGTGGGAATCGCTGCTTTGTCCGCGAGCAGTATGTTGTTGAAGTGAGAACGAAATATGGAAGAAGACACAGAGCAAGTTTGTTCATCAGTTGTTTTTATCGTTTGTCAATTTGGTGTGGTCCTTGGGATATGAATGTGTTATTTTTGACTAATTGGGATTTCTTTTCTTGGTTTTTCTTGATTGGGAAATGGTGTGCCCATGTAATTGGCATGAGGGCTACTTTTGAAGTTATCGTTTTCTTTTCCTTTCGTTCAAATAATCTTTTCTTACCAATATATATATTTATATGAAACCTATTGCTGCATGTTTTTTGAAGATGATTGCATTTTCAAGTTGCCTTTCTTCGTTTATCTGGCTGTCGTTTTTTTTTTTTTTTTGGTTGCAAGAATTTCCACATTTCATCTATGGTTGACAAACTTCTTTTTTGTTATTGCGAAGTTCCTTTGGGGTCTCGGTCTTCCTGAAGATGAAGCAGAGTGCGGTGATGTTTATGGCTTGGATGATGAGCTCTTGGACATGGTGCCTAAGCCTGTTCTGGCGGTTTTGTTTCTTTATCCCATAACCGAAAAGGTTTTCTTACAGATAAAGTTCATTTTAATGATCTTTATGGATTTGAAGAATTCCTTTGAAAAGTTCTCCATTTTCTAAATGTTTTAATATTTTCAGAGCGAAGAAGAGAGACGACAACAGGAAAAGGAAGCAAAGAAGGTGAGCAAGTGTATTAAGTCCTCTTTATATTATGTCATACCACTTGGCTGAACCATGTAGATACGTTTTTCCTAAATTATGATGTTACCTGATGTTTGTCTATTGAATCAAAGGTTATCTGTCATAAATTGTTTTAAATAAAAAATAATGTTTTTAGAAATGGTGAGAGGTGCGAGAAAATAGAAAGATTGTCATTAATATTGACAAAAACAAAATGCCCATTTGGTTACATAATCGAGTATGAACAGTCCACTTTTGGTGCATGTTGTTCTGTCTTTTTACACTTTCTAATACTATATTTAAAATGTTTTATATATCTGTAAGCCTTATCTAATAAGGCTCTCTCCTTTCTGTTGTGACTCTAGGATTACAGCAATCAAGTATACTTTATGAAACAAACAGTTGGCAATGCCTGTGGAACTATTGGACTGCTTCATGCTATTGGGAACGTTACTTCGGAAATTAAGCTTTGTAAGTACTGAGTGATGCTAGCCAATTTAACGAGGGGAAACATATTTCTTCGTTGTTGTGAATATGCACAGTTAGCCTGAGGCTTTTCCTATATCTGTTATTTTACTTGCACTTATAGAGTAGAGTAGAGAATTGAGGACTGAAGAAAGTTATGTATCACTGAAAATAAGCAGAACACGAATTGAAAGTGAAACTTAGAGTTATCTGTTGGGTCATTCATATGTTTAATTTGGTATTCTTGTCCTTATCCAACTTCTGTCCTGTGGCTGGTCACAATCCAATGTACAGTACTTATGTTGGTGAAGTTTCATCAATGTATCTACTCTCCTACTTGTTTTGGTATATCCTGACTGATTACTTAAGTGCTGTTATGATATTTCTTTAAGTTCTGGCACACTCATTTTTAACTTGCGTTCCTTTTCTCTTTTATCTTTTACAGCGGAGGGATCATTCTTGGATAGGTTCTTCAAGTCTACCAAAAGCATGGATCCGATCGAGGTTCTATTTACAATAACATGCTTCTCTCCCACTCCCCTCCTCCCTCTCCACCCCACCGGCAACCAAAAGTATTATAGAAAAGGACAAACATAACTACAAACACAAGAAAGATAATATTATATTTCTCTATCCTTTCCCTTGTTGAGATGGTTTTGCTTCTAATAGTTGTATGTTGTTCACTTTGGTAGCGTGCGGCATTTCTTGAGAAAGACGATGAAATGGAAGTTGCACATTCAGTAGCAGCAACTGCTGGAGATACGACAGTAAGACTCTTTTTAAGTTTAACTGCATTATGATGGAGAATGATAGTAGAAGAGTTTTTCTTGTTCCCTTTAAGTATATTAAGAATAGAAAGATATAGCCTAATGCTTTTGCTTCTTTTCCTTTTTCAAATAGCTATTAATTTAATTGGAAACAGGGAAAATGGACATAATTTTTAGAAGTTCAAGATCTAATAACACATGGATTGGTTGTGTATAGTGGACATAAGGTTTGAAGCTTTGGACAAAGTTTTAAAATTGAGGTACATAATATATGTTGATGCATAGTTATTTCCGGATCAAGTCATGGATTTTCCATGCTTTCAACTTCATGCCTTCTAATTTAGAGAATTAAGATTTGAAAAATACAGCATATTTAGACTCCTTATTGGTTAAGGTGAATGATGTCTCGTCTGGCAGATATCTATCTGATAATAAGTGATCCCATGAACTTTAAATTAATTCACTGGAGCGAATGCTCTTTATTTTCCCCATATTTTCAAGTGTGTTAATGCAATTTCCATTTCTGGCTCATCTTTCCTTGCACTTGTTATTGGCAGGCTCCGGAGAAAGTCGATACTCACTTTATCTGCTTCTCATGTGTGGATGGTACACACTTGTTGAACTTCTCTTATAGGGAAACAAATTGCTTCTTTATCATGTTTACTTTGAATTCAGTGATCAGATTTCCTCAGAGGTCATCTAATCTTTACAATATCCTAATTGATGGTTTAAATAGGGAAACTTTATGAGCTCGACGGGAGAAAGACGGAACCTATATCACATGGTCCATCATCACCCAACAGTTTATTACAGGTATGATTGCTCTGAAAGATCATCCGTGTCTGTTTTAGCCATTAGTCCAAAACTACTTCATAAATGAATCTACAGATCAACATATTACCCCACTTCTCTTCCATTTAATGAAATACTTGATGAAACCCACAGGATGCAGCTCGAGTCATAAAAGACATGATCTCGGATAACCCCGAGTCGCTGAACTTCAATGTCATTGCCATCTCAAAGAGGACTGGGCCGGAAGGAAGCATCTGAAGGCGACCAAGGTTCAATCTGATTTAGTTTTACATCAATGACCTAGTCCTATTACCTAGTTTTCGGCATGTGTAGATGCATGTATGAGGAATCCGTTAGCTTGTTACGACACAAATCTGTTTTTGTTGTAGTTGAACAAAGTGTTTAGTAGTACCTTAGATCAGACTTTCTTTTGTGGTTTAAAAATTTGCTCTGATGATACAATAGAAAAAGTTGTTCATTGCTTTTGTTGTTCAGGATGGAAAGTTGACAATCGTTCAAGGTGATATTTGATTGATTAAATTATAATCATAATCGAATAAAAAACCACTTTTAAAAAAATGTTATAAAAATTGATGAAAATAAATAAAGACTCAAAT ATGGTGGGCTTTTTCGTAGTTTATTTTGATAAAGATGGAATGCCCGTGCTATTAGAATCAGGGTTCCTTTGGGGTCTCGGTCTTCCTGAAGATGAAGCAGAGTGCGGTGATGTTTATGGCTTGGATGATGAGCTCTTGGACATGGTGCCTAAGCCTGTTCTGGCGGTTTTGTTTCTTTATCCCATAACCGAAAAGAGCGAAGAAGAGAGACGACAACAGGAAAAGGAAGCAAAGAAGGATTACAGCAATCAAGTATACTTTATGAAACAAACAGTTGGCAATGCCTGTGGAACTATTGGACTGCTTCATGCTATTGGGAACGTTACTTCGGAAATTAAGCTTTCGGAGGGATCATTCTTGGATAGGTTCTTCAAGTCTACCAAAAGCATGGATCCGATCGAGCGTGCGGCATTTCTTGAGAAAGACGATGAAATGGAAGTTGCACATTCAGTAGCAGCAACTGCTGGAGATACGACAGCTCCGGAGAAAGTCGATACTCACTTTATCTGCTTCTCATGTGTGGATGGGAAACTTTATGAGCTCGACGGGAGAAAGACGGAACCTATATCACATGGTCCATCATCACCCAACAGTTTATTACAGGATGCAGCTCGAGTCATAAAAGACATGATCTCGGATAACCCCGAGTCGCTGAACTTCAATGTCATTGCCATCTCAAAGAGGACTGGGCCGGAAGGAAGCATCTGA ATGGTGGGCTTTTTCGTAGTTTATTTTGATAAAGATGGAATGCCCGTGCTATTAGAATCAGGGTTCCTTTGGGGTCTCGGTCTTCCTGAAGATGAAGCAGAGTGCGGTGATGTTTATGGCTTGGATGATGAGCTCTTGGACATGGTGCCTAAGCCTGTTCTGGCGGTTTTGTTTCTTTATCCCATAACCGAAAAGAGCGAAGAAGAGAGACGACAACAGGAAAAGGAAGCAAAGAAGGATTACAGCAATCAAGTATACTTTATGAAACAAACAGTTGGCAATGCCTGTGGAACTATTGGACTGCTTCATGCTATTGGGAACGTTACTTCGGAAATTAAGCTTTCGGAGGGATCATTCTTGGATAGGTTCTTCAAGTCTACCAAAAGCATGGATCCGATCGAGCGTGCGGCATTTCTTGAGAAAGACGATGAAATGGAAGTTGCACATTCAGTAGCAGCAACTGCTGGAGATACGACAGCTCCGGAGAAAGTCGATACTCACTTTATCTGCTTCTCATGTGTGGATGGGAAACTTTATGAGCTCGACGGGAGAAAGACGGAACCTATATCACATGGTCCATCATCACCCAACAGTTTATTACAGGATGCAGCTCGAGTCATAAAAGACATGATCTCGGATAACCCCGAGTCGCTGAACTTCAATGTCATTGCCATCTCAAAGAGGACTGGGCCGGAAGGAAGCATCTGA MVGFFVVYFDKDGMPVLLESGFLWGLGLPEDEAECGDVYGLDDELLDMVPKPVLAVLFLYPITEKSEEERRQQEKEAKKDYSNQVYFMKQTVGNACGTIGLLHAIGNVTSEIKLSEGSFLDRFFKSTKSMDPIERAAFLEKDDEMEVAHSVAATAGDTTAPEKVDTHFICFSCVDGKLYELDGRKTEPISHGPSSPNSLLQDAARVIKDMISDNPESLNFNVIAISKRTGPEGSI* Homology
BLAST of CsaV3_3G002450 vs. NCBI nr
Match: XP_031737555.1 (ubiquitin carboxyl-terminal hydrolase 3 isoform X2 [Cucumis sativus] >KAE8650049.1 hypothetical protein Csa_011088 [Cucumis sativus]) HSP 1 Score: 473.4 bits (1217), Expect = 1.1e-129 Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 0
BLAST of CsaV3_3G002450 vs. NCBI nr
Match: XP_011650383.2 (ubiquitin carboxyl-terminal hydrolase 3 isoform X1 [Cucumis sativus]) HSP 1 Score: 431.0 bits (1107), Expect = 6.5e-117 Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0
BLAST of CsaV3_3G002450 vs. NCBI nr
Match: XP_008448803.1 (PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Cucumis melo]) HSP 1 Score: 410.6 bits (1054), Expect = 9.1e-111 Identity = 204/214 (95.33%), Postives = 210/214 (98.13%), Query Frame = 0
BLAST of CsaV3_3G002450 vs. NCBI nr
Match: KAA0041062.1 (ubiquitin carboxyl-terminal hydrolase 3 [Cucumis melo var. makuwa] >TYK12046.1 ubiquitin carboxyl-terminal hydrolase 3 [Cucumis melo var. makuwa]) HSP 1 Score: 410.6 bits (1054), Expect = 9.1e-111 Identity = 204/214 (95.33%), Postives = 210/214 (98.13%), Query Frame = 0
BLAST of CsaV3_3G002450 vs. NCBI nr
Match: XP_038903625.1 (ubiquitin carboxyl-terminal hydrolase 3-like [Benincasa hispida]) HSP 1 Score: 380.2 bits (975), Expect = 1.3e-101 Identity = 185/209 (88.52%), Postives = 203/209 (97.13%), Query Frame = 0
BLAST of CsaV3_3G002450 vs. ExPASy Swiss-Prot
Match: Q8GWE1 (Ubiquitin carboxyl-terminal hydrolase 3 OS=Arabidopsis thaliana OX=3702 GN=UCH3 PE=2 SV=1) HSP 1 Score: 318.5 bits (815), Expect = 6.2e-86 Identity = 159/209 (76.08%), Postives = 180/209 (86.12%), Query Frame = 0
BLAST of CsaV3_3G002450 vs. ExPASy Swiss-Prot
Match: Q2TBG8 (Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Bos taurus OX=9913 GN=UCHL3 PE=2 SV=1) HSP 1 Score: 193.0 bits (489), Expect = 3.9e-48 Identity = 102/196 (52.04%), Postives = 130/196 (66.33%), Query Frame = 0
BLAST of CsaV3_3G002450 vs. ExPASy Swiss-Prot
Match: P15374 (Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Homo sapiens OX=9606 GN=UCHL3 PE=1 SV=1) HSP 1 Score: 192.6 bits (488), Expect = 5.1e-48 Identity = 102/196 (52.04%), Postives = 130/196 (66.33%), Query Frame = 0
BLAST of CsaV3_3G002450 vs. ExPASy Swiss-Prot
Match: Q9JKB1 (Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Mus musculus OX=10090 GN=Uchl3 PE=1 SV=2) HSP 1 Score: 192.2 bits (487), Expect = 6.7e-48 Identity = 102/196 (52.04%), Postives = 130/196 (66.33%), Query Frame = 0
BLAST of CsaV3_3G002450 vs. ExPASy Swiss-Prot
Match: Q06AB3 (Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Sus scrofa OX=9823 GN=UCHL3 PE=2 SV=1) HSP 1 Score: 191.8 bits (486), Expect = 8.7e-48 Identity = 102/196 (52.04%), Postives = 130/196 (66.33%), Query Frame = 0
BLAST of CsaV3_3G002450 vs. ExPASy TrEMBL
Match: A0A0A0L5F5 (Ubiquitin carboxyl-terminal hydrolase OS=Cucumis sativus OX=3659 GN=Csa_3G017310 PE=3 SV=1) HSP 1 Score: 431.0 bits (1107), Expect = 3.2e-117 Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0
BLAST of CsaV3_3G002450 vs. ExPASy TrEMBL
Match: A0A5A7TC70 (Ubiquitin carboxyl-terminal hydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00590 PE=3 SV=1) HSP 1 Score: 410.6 bits (1054), Expect = 4.4e-111 Identity = 204/214 (95.33%), Postives = 210/214 (98.13%), Query Frame = 0
BLAST of CsaV3_3G002450 vs. ExPASy TrEMBL
Match: A0A1S3BKK2 (Ubiquitin carboxyl-terminal hydrolase OS=Cucumis melo OX=3656 GN=LOC103490861 PE=3 SV=1) HSP 1 Score: 410.6 bits (1054), Expect = 4.4e-111 Identity = 204/214 (95.33%), Postives = 210/214 (98.13%), Query Frame = 0
BLAST of CsaV3_3G002450 vs. ExPASy TrEMBL
Match: A0A6J1E676 (Ubiquitin carboxyl-terminal hydrolase OS=Cucurbita moschata OX=3662 GN=LOC111431087 PE=3 SV=1) HSP 1 Score: 360.5 bits (924), Expect = 5.2e-96 Identity = 175/209 (83.73%), Postives = 194/209 (92.82%), Query Frame = 0
BLAST of CsaV3_3G002450 vs. ExPASy TrEMBL
Match: A0A6J1HQ82 (Ubiquitin carboxyl-terminal hydrolase OS=Cucurbita maxima OX=3661 GN=LOC111465100 PE=3 SV=1) HSP 1 Score: 357.8 bits (917), Expect = 3.4e-95 Identity = 174/209 (83.25%), Postives = 193/209 (92.34%), Query Frame = 0
BLAST of CsaV3_3G002450 vs. TAIR 10
Match: AT4G17510.1 (ubiquitin C-terminal hydrolase 3 ) HSP 1 Score: 318.5 bits (815), Expect = 4.4e-87 Identity = 159/209 (76.08%), Postives = 180/209 (86.12%), Query Frame = 0
BLAST of CsaV3_3G002450 vs. TAIR 10
Match: AT1G65650.1 (Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 ) HSP 1 Score: 65.9 bits (159), Expect = 5.1e-11 Identity = 59/203 (29.06%), Postives = 96/203 (47.29%), Query Frame = 0
BLAST of CsaV3_3G002450 vs. TAIR 10
Match: AT5G16310.1 (Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 ) HSP 1 Score: 57.0 bits (136), Expect = 2.4e-08 Identity = 54/209 (25.84%), Postives = 92/209 (44.02%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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