CsaV3_3G002300 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G002300
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	ATP-dependent Clp protease proteolytic subunit
Location	chr3: 1844366 .. 1848700 (+)
RNA-Seq Expression	CsaV3_3G002300
Synteny	CsaV3_3G002300

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTATCTTCGGCTTTTCTTCTGTTGTTCGTTTCGGATTATCACTCTTCAAGGTTTCCCGAGCCATGGAGGTCGCCACTACTGCCTCCAGCTTCGCCCTTACCAAGCGAATATCCCCATTGATTACTTCTTCCCATAATGGAAAATCGAACAGGACCTTGTCCATGTCGTCATCCTCTGTCAGAATGGCTCCGCTTTCGACTAATTTTCTCATCCCATTCGCCGGGGGCAGCGTCTCCGGGGAATTTTCCGGCGTGAAGCTCCGGCCTTCTTCGCTTAATCCGAATTATTCCCCTGGATCCAAGGGCAAACGGGGTGTTGTTACTATGGTGAATGCCTGAACTTTTTTGCTCTTCCAGTGTTATTTGGATATTGGTTTGAAGTTTTGTTGCTTATTTGTTCTTTCAACTACTCGGGGGTTAACTAAATTGTAGTTTATGAGTTCGTTCAGGTGAAATTTTTCGATATTGGTTTGAAATTTTGTTGCCTATTTCTTGAAATGGAACTAAATTAAACTCTGAAGACTGAAGAGTTCTTCCCTTGTGATGTACAACTCTTGATATTTCTTTGTGTTAATCGATTCTTTTGTAACTTCTTTAGTTTGGGCATATGCCCTTCTTTTGTAACTTTCATACATCAATTGAATTTGTTTGAAAAAAAATGTTGCCTATTTGTTCTCCTATTACTTCGGTTTACTATATTGTGGTTTACTGGTCCTCTTTTGGAGGATTTGTGCTATGCTTTGTGAAAATTAGACAGCTGTTTACTTAGTGGTATGCTCAAATACCTGCAAATGAAAGACTCTCAATCTCAAATAGGTCGGGAGATTATAGTGGAGACTAAAAAGTACTCTGTTGGCAAAGTTACTTGTGACTTTAACTACCTATTGATGTATATGGGGGATTGATTGAACTTACTCTTTTTTAAATATAAACGATAATTTTTACTGTTAACGGCCTTCCTTCAATTGTAAATGTTCTTTTCAGAACCACTATCTATTCTTGCTGGCCTCTTGTATCATATCTACCTGATTTCATTGAACAGGTTATTCCATTTGCAAGGGGAAGTGCATGGGAGCAACCTCCTCCAGATTTGGCATCTTATTTATACAAGAATCGAATTGTATACTTGGGCATGTCTCTTGTCCCTTCTGTCACAGAGTTGATACTTGCTGAATTTCTTTACCTTCAGTATGAGGATGAAACAAAGCCTATTTATCTTTACGTTAACTCCACGGGGACAACAAAGGTTAACTATGTTCTAAAGTTTTATGTCGTTTTGATCACTTTTATCTAGCTTAAACTTTGTGGGAATACCTTTAACCTTGGTTTTTAAATGATTGTGATGCAAGCAACTGGTAGAGGTTTTTGTTGTGTTAATTACGTACAATTTTCATGGCCTTTAAAAGTAACATCTAAAAGTTTGATGAAGCCTACTATTTTTATAAGAAAATGTTTGTCAACTTCAAGTCCTGCAGAGAAAGGATTGTTAACCTTGTGACCTTTTCCATGTGATAGTGGATCATAATGAAGTGCTTGTATTTTCTAGGGTGGCGAGAAGTTGGGCTATGAGACCGAAGCATTTGCAGTATATGATGTTATGAGGTTGTGATGTGAATTTTTATTTATAGTCTATTTGGTATTCTGTTTTTTTCAATCTTTCTTTTATTGGCATTTAAGACATGTTTAGGACCCGACGAAAATTGTTTAATGTTCATGACTTAGTATTCCTTTTCACTGCAGTTATGTTAAGCCTCCTATATTCACGTTATGCGTTGGTAATGCGTGGGGAGAAGCAGCACTTCTTTTGGCAGCTGGTGCTCCGGGAAATCGTTCTGCATTGCCCTCATCAACAATAATGATTAAGGAGGTATTCTATCATCAACGGATATCTTTTCATTCTTATTCTTATTCTTCTGCTCATTTTTGAACTTCAGAAAGGTGTTTGTATCTTGAGTAAGCTTGTGTCACTACCAGCTAGGTGGTCTTTTGGTATACTTTTGTAGAGTTTTAGAATTTTTTTTGTTTTTCTCCTGCAATCTGCAGCCAATTGCAAGGTTTCAAGGTCAAGCGACAGACGTTGAGATCGCTAGAAAAGAAGTACGGAATGTGAAGGCAGAACTGGTAAGATCATGGTTGAAGTTTGTGCTCTGGGTTTGCTTTCTCTTCATTCCCATACTCGTCCTTGTTTTTTTCCTTCCTGAAATGAGAGGTAGGGATGTGCATGTGCTATATAGTACACTTGAGTTCGATTGACTGGGATTTATCTTTGGATAAGAAACCAAAAGTAAGATAGAGGTGGTAACCACTTGAGTTCAATTGGCTGGGTTCAACTTCAAGATATGGTGGCAGTCTATCCATGAGTTACCTTAGCAACCAAATGTAGTAGAGTTAGTGGCTTGTGAGAATTATCGAAGCTGGCTCAGACACAACACATAGTTTTTTAAAAAGAAATAAAGCCTGGTTATAGAAAGGGAAAGGACAGGGAAGCATGCCCCTAGCTCAAATTAGGCCTGGAAATTCCCTATTTAGATTACCAAGAAGGGTTAGTTACAGAAATGCTGTTAAGATAGGTACAAGAAGTGGCTAAAAAAGTGGACAATCCAAAAAATCCTCTCAACTTCTAAAATAGTGTTGAAAATTTCTACTATTTCTAGCCATAAACTCCACGACACTAACATTCAACCTAAGAACAGCAGCTTGGTTCAGTAGGATACCATCAATGCCTTCGAAATTTAAACAGAAGTCACTATTTGTGTATAGGATTACTTTTAGAAAGTTTAAATTTTACATTGTTCCCTCGAAACAAGCACAGGTGAGTGAAATCACAGTTCTTTCCTTTTTACAATCGATATTGAAGGTTAAGCTTTATGCCAAGCATATTGGAAAGTCAACTGAGGAGATTGAAGCTGATATCAGGCGGCCAAAATATTTTAGTCCCAGCGAAGCAGTTGAATATGGTATCATAGATAAGGTACCTGAATTGCAAAGTAAACTAATTATCATATTTTATTGTGAATGTGCATTAAATTGAATATCATCTACTTTCATCAGGTTCTATACAACGAAAGAGCAACTGAGGACCGGGGAGTTGTATCTGACCTGAAAAAGGCACAACTTATTTAGTATAGAAAAATGTGGATTGGTAAAACAGTACCAAGGTAAAGTTCAACTACAAATCATTTCACAGATATACTGGAAGTACTACATTATGATTATGATTATGATTATGCACCTTGTATCGTGTTAGATGATATAATATCAAATTTACCTTCACTTATCGGTTTGAACTTTTTTGTCACTCAGTAATTTAAGATGATATCAAAACAGATGGTCTATGGAGCCCTATGTTCAAATCTTTGCAGCGTTATTTCGTCTTAATTAATATTTATTTACGTTTGTTGAGTTACTACATATTTCAAGCCTACACATGAGGAGAAATTTTAGATGATATAATATTAAATATCTTTACTTATCCATGCTTTTGAATATTCGGTGATTTAAGACATTGCTTGTTCTTGTTCATGGGCTGGTCGTTAATTGAGGACATGAACGGTGGTCTTATAAACCAAATCATATGGAAAAACGTTGGCGACTGTCTACTGTTCTAGCCTTTCAATTGTAAAATTGTCAAAATCTTTCATTTGGGTGTTTCACGGCCCTCTAATACACTGTTCCTACTTTCAGATTGAAGTTTGCACAAATACTGGGTAGCATCTGAGAACTGAAATTTGTAATCCTCAAGCAGTATTGATCGGACACAGGAAACGATCTGTGAGTTTGTTGCAAGCTTATCGACTTCCAGTATCCATGGAACTTTCTGAATTATATTACAATTCTAGAACAATGTTACAAAAAGGAAAACTGGTTGATTGATGTTCAACGTTAACCAAGAAAATTGAAGCATTCTGTTTTGCTCATCTTCAACCAAAAAATTCTTGCCTTTATGTGATCAAACTTTCCCGATGTGCAGTGAAAATTCTTCCTTCCCGTGTAGAGGAACAATCTTTTCAAATCTAATAACTTAGACCACATGGTTTCTACAATGAATATATATCCATCATTGTTACAGGCAAGGTTTGATAGGGAGATGGTGACGAACATGTTGAATCTCAGTTGAACTAAAATATCGATAAATTGACTATGGATACGTGTGGAAAATTTTAAAAACATAAATGAGAAAAAAGTACTGAGTAATTTTTTGTTTAGTGTTTATGTACTGTGATATATACAATTTTGATTTGTTTAGGGTTTATGAACATATGAAATTTATACATTAAGTCAATATAGGATCTATGTATGGCGGTATATTTCATATATTACATTATAAGTGATTT

mRNA sequence

ATGGAGGTCGCCACTACTGCCTCCAGCTTCGCCCTTACCAAGCGAATATCCCCATTGATTACTTCTTCCCATAATGGAAAATCGAACAGGACCTTGTCCATGTCGTCATCCTCTGTCAGAATGGCTCCGCTTTCGACTAATTTTCTCATCCCATTCGCCGGGGGCAGCGTCTCCGGGGAATTTTCCGGCGTGAAGCTCCGGCCTTCTTCGCTTAATCCGAATTATTCCCCTGGATCCAAGGGCAAACGGGGTGTTGTTACTATGGTTATTCCATTTGCAAGGGGAAGTGCATGGGAGCAACCTCCTCCAGATTTGGCATCTTATTTATACAAGAATCGAATTGTATACTTGGGCATGTCTCTTGTCCCTTCTGTCACAGAGTTGATACTTGCTGAATTTCTTTACCTTCAGTATGAGGATGAAACAAAGCCTATTTATCTTTACGTTAACTCCACGGGGACAACAAAGGGTGGCGAGAAGTTGGGCTATGAGACCGAAGCATTTGCAGTATATGATGTTATGAGTTATGTTAAGCCTCCTATATTCACGTTATGCGTTGGTAATGCGTGGGGAGAAGCAGCACTTCTTTTGGCAGCTGGTGCTCCGGGAAATCGTTCTGCATTGCCCTCATCAACAATAATGATTAAGGAGCCAATTGCAAGGTTTCAAGGTCAAGCGACAGACGTTGAGATCGCTAGAAAAGAAGTACGGAATGTGAAGGCAGAACTGGTTAAGCTTTATGCCAAGCATATTGGAAAGTCAACTGAGGAGATTGAAGCTGATATCAGGCGGCCAAAATATTTTAGTCCCAGCGAAGCAGTTGAATATGGTATCATAGATAAGGTTCTATACAACGAAAGAGCAACTGAGGACCGGGGAGTTGTATCTGACCTGAAAAAGGCACAACTTATTTAG

Coding sequence (CDS)

ATGGAGGTCGCCACTACTGCCTCCAGCTTCGCCCTTACCAAGCGAATATCCCCATTGATTACTTCTTCCCATAATGGAAAATCGAACAGGACCTTGTCCATGTCGTCATCCTCTGTCAGAATGGCTCCGCTTTCGACTAATTTTCTCATCCCATTCGCCGGGGGCAGCGTCTCCGGGGAATTTTCCGGCGTGAAGCTCCGGCCTTCTTCGCTTAATCCGAATTATTCCCCTGGATCCAAGGGCAAACGGGGTGTTGTTACTATGGTTATTCCATTTGCAAGGGGAAGTGCATGGGAGCAACCTCCTCCAGATTTGGCATCTTATTTATACAAGAATCGAATTGTATACTTGGGCATGTCTCTTGTCCCTTCTGTCACAGAGTTGATACTTGCTGAATTTCTTTACCTTCAGTATGAGGATGAAACAAAGCCTATTTATCTTTACGTTAACTCCACGGGGACAACAAAGGGTGGCGAGAAGTTGGGCTATGAGACCGAAGCATTTGCAGTATATGATGTTATGAGTTATGTTAAGCCTCCTATATTCACGTTATGCGTTGGTAATGCGTGGGGAGAAGCAGCACTTCTTTTGGCAGCTGGTGCTCCGGGAAATCGTTCTGCATTGCCCTCATCAACAATAATGATTAAGGAGCCAATTGCAAGGTTTCAAGGTCAAGCGACAGACGTTGAGATCGCTAGAAAAGAAGTACGGAATGTGAAGGCAGAACTGGTTAAGCTTTATGCCAAGCATATTGGAAAGTCAACTGAGGAGATTGAAGCTGATATCAGGCGGCCAAAATATTTTAGTCCCAGCGAAGCAGTTGAATATGGTATCATAGATAAGGTTCTATACAACGAAAGAGCAACTGAGGACCGGGGAGTTGTATCTGACCTGAAAAAGGCACAACTTATTTAG

Protein sequence

MEVATTASSFALTKRISPLITSSHNGKSNRTLSMSSSSVRMAPLSTNFLIPFAGGSVSGEFSGVKLRPSSLNPNYSPGSKGKRGVVTMVIPFARGSAWEQPPPDLASYLYKNRIVYLGMSLVPSVTELILAEFLYLQYEDETKPIYLYVNSTGTTKGGEKLGYETEAFAVYDVMSYVKPPIFTLCVGNAWGEAALLLAAGAPGNRSALPSSTIMIKEPIARFQGQATDVEIARKEVRNVKAELVKLYAKHIGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERATEDRGVVSDLKKAQLI*

Homology

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BLAST of CsaV3_3G002300 vs. NCBI nr
Match: XP_004147236.1 (ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic [Cucumis sativus] >KGN55823.1 hypothetical protein Csa_011232 [Cucumis sativus])

HSP 1 Score: 589.7 bits (1519), Expect = 1.4e-164
Identity = 304/304 (100.00%), Postives = 304/304 (100.00%), Query Frame = 0


Query: 1   MEVATTASSFALTKRISPLITSSHNGKSNRTLSMSSSSVRMAPLSTNFLIPFAGGSVSGE 60
           MEVATTASSFALTKRISPLITSSHNGKSNRTLSMSSSSVRMAPLSTNFLIPFAGGSVSGE
Sbjct: 1   MEVATTASSFALTKRISPLITSSHNGKSNRTLSMSSSSVRMAPLSTNFLIPFAGGSVSGE 60

Query: 61  FSGVKLRPSSLNPNYSPGSKGKRGVVTMVIPFARGSAWEQPPPDLASYLYKNRIVYLGMS 120
           FSGVKLRPSSLNPNYSPGSKGKRGVVTMVIPFARGSAWEQPPPDLASYLYKNRIVYLGMS
Sbjct: 61  FSGVKLRPSSLNPNYSPGSKGKRGVVTMVIPFARGSAWEQPPPDLASYLYKNRIVYLGMS 120

Query: 121 LVPSVTELILAEFLYLQYEDETKPIYLYVNSTGTTKGGEKLGYETEAFAVYDVMSYVKPP 180
           LVPSVTELILAEFLYLQYEDETKPIYLYVNSTGTTKGGEKLGYETEAFAVYDVMSYVKPP
Sbjct: 121 LVPSVTELILAEFLYLQYEDETKPIYLYVNSTGTTKGGEKLGYETEAFAVYDVMSYVKPP 180

Query: 181 IFTLCVGNAWGEAALLLAAGAPGNRSALPSSTIMIKEPIARFQGQATDVEIARKEVRNVK 240
           IFTLCVGNAWGEAALLLAAGAPGNRSALPSSTIMIKEPIARFQGQATDVEIARKEVRNVK
Sbjct: 181 IFTLCVGNAWGEAALLLAAGAPGNRSALPSSTIMIKEPIARFQGQATDVEIARKEVRNVK 240

Query: 241 AELVKLYAKHIGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERATEDRGVVSDLKK 300
           AELVKLYAKHIGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERATEDRGVVSDLKK
Sbjct: 241 AELVKLYAKHIGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERATEDRGVVSDLKK 300

Query: 301 AQLI 305
           AQLI
Sbjct: 301 AQLI 304

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BLAST of CsaV3_3G002300 vs. NCBI nr
Match: XP_008448778.1 (PREDICTED: ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic [Cucumis melo] >KAA0041047.1 ATP-dependent Clp protease proteolytic subunit-related protein 4 [Cucumis melo var. makuwa] >TYK12057.1 ATP-dependent Clp protease proteolytic subunit-related protein 4 [Cucumis melo var. makuwa])

HSP 1 Score: 554.3 bits (1427), Expect = 6.6e-154
Identity = 283/304 (93.09%), Postives = 294/304 (96.71%), Query Frame = 0


Query: 1   MEVATTASSFALTKRISPLITSSHNGKSNRTLSMSSSSVRMAPLSTNFLIPFAGGSVSGE 60
           MEVATTASSFALTKRISPL  SS+ GKSNRTLS+SSSSVR APLSTNFLIPFAGGSVSG+
Sbjct: 1   MEVATTASSFALTKRISPLFASSNYGKSNRTLSLSSSSVRTAPLSTNFLIPFAGGSVSGD 60

Query: 61  FSGVKLRPSSLNPNYSPGSKGKRGVVTMVIPFARGSAWEQPPPDLASYLYKNRIVYLGMS 120
           FSGVKLRP SLNPN  PGSKGKRGVVTMVIPF+RGSAWEQPPPDLASYLYKNRIVYLGMS
Sbjct: 61  FSGVKLRPYSLNPNCFPGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS 120

Query: 121 LVPSVTELILAEFLYLQYEDETKPIYLYVNSTGTTKGGEKLGYETEAFAVYDVMSYVKPP 180
           LVPSVTELILAEFLYLQYEDETKPIYLY+NSTGTTKGGEKLGYETEAFA+YDVM YVKPP
Sbjct: 121 LVPSVTELILAEFLYLQYEDETKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMRYVKPP 180

Query: 181 IFTLCVGNAWGEAALLLAAGAPGNRSALPSSTIMIKEPIARFQGQATDVEIARKEVRNVK 240
           IFTLCVGNAWGEAALLLAAGA GNRSALPSSTIMIK+PIARFQGQATDVE+ARKEVRNVK
Sbjct: 181 IFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQPIARFQGQATDVELARKEVRNVK 240

Query: 241 AELVKLYAKHIGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERATEDRGVVSDLKK 300
           AELVKL+AKH+GKSTEEIEADIRRPKYF+PSEAVEYGIIDKVLYNER TEDRGVVSDLKK
Sbjct: 241 AELVKLFAKHVGKSTEEIEADIRRPKYFTPSEAVEYGIIDKVLYNERTTEDRGVVSDLKK 300

Query: 301 AQLI 305
           AQLI
Sbjct: 301 AQLI 304

[Close]

BLAST of CsaV3_3G002300 vs. NCBI nr
Match: XP_038902969.1 (ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic [Benincasa hispida])

HSP 1 Score: 553.9 bits (1426), Expect = 8.6e-154
Identity = 283/304 (93.09%), Postives = 294/304 (96.71%), Query Frame = 0


Query: 1   MEVATTASSFALTKRISPLITSSHNGKSNRTLSMSSSSVRMAPLSTNFLIPFAGGSVSGE 60
           MEVATTASSFALTKRISPLITSSH+ KSNR LS+SSSS+R  PLSTNFLIPFAGGSVSG+
Sbjct: 1   MEVATTASSFALTKRISPLITSSHDRKSNRALSLSSSSLRTPPLSTNFLIPFAGGSVSGD 60

Query: 61  FSGVKLRPSSLNPNYSPGSKGKRGVVTMVIPFARGSAWEQPPPDLASYLYKNRIVYLGMS 120
           FSGVKLRPSSLN + SPGSKGKRGVVTMVIPF+RGSAWEQPPPDLASYLYKNRIVYLGMS
Sbjct: 61  FSGVKLRPSSLNTDSSPGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS 120

Query: 121 LVPSVTELILAEFLYLQYEDETKPIYLYVNSTGTTKGGEKLGYETEAFAVYDVMSYVKPP 180
           LVPSVTELILAEFLYLQYEDE KPIYLY+NSTGTTKGGEKLGYETEAFA+YDVM YVKPP
Sbjct: 121 LVPSVTELILAEFLYLQYEDEAKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMRYVKPP 180

Query: 181 IFTLCVGNAWGEAALLLAAGAPGNRSALPSSTIMIKEPIARFQGQATDVEIARKEVRNVK 240
           IFTLCVGNAWGEAALLLAAGA GNRSALPSSTIMIK+PIARFQGQATD+E+ARKEVRNVK
Sbjct: 181 IFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQPIARFQGQATDIELARKEVRNVK 240

Query: 241 AELVKLYAKHIGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERATEDRGVVSDLKK 300
           AELVKLYAKHIGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNER TEDRGVVSDLKK
Sbjct: 241 AELVKLYAKHIGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERTTEDRGVVSDLKK 300

Query: 301 AQLI 305
           AQLI
Sbjct: 301 AQLI 304

[Close]

BLAST of CsaV3_3G002300 vs. NCBI nr
Match: XP_022155521.1 (ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic [Momordica charantia])

HSP 1 Score: 544.7 bits (1402), Expect = 5.2e-151
Identity = 278/304 (91.45%), Postives = 291/304 (95.72%), Query Frame = 0


Query: 1   MEVATTASSFALTKRISPLITSSHNGKSNRTLSMSSSSVRMAPLSTNFLIPFAGGSVSGE 60
           MEVATTAS+FALTKRISP ITSSHN KSNR LS SSSS+R  PLSTNFL PFAGGSVSG+
Sbjct: 1   MEVATTASTFALTKRISPSITSSHNPKSNRALSFSSSSLRPTPLSTNFLAPFAGGSVSGD 60

Query: 61  FSGVKLRPSSLNPNYSPGSKGKRGVVTMVIPFARGSAWEQPPPDLASYLYKNRIVYLGMS 120
           F+GVKLRPSSLNP+ S GSKGKRGVVTMVIPF+RGSAWEQPPPDLASYLYKNRIVYLGMS
Sbjct: 61  FAGVKLRPSSLNPDSSRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS 120

Query: 121 LVPSVTELILAEFLYLQYEDETKPIYLYVNSTGTTKGGEKLGYETEAFAVYDVMSYVKPP 180
           LVPSVTELILAEFLYLQYEDE KPIYLY+NSTGTTKGGEKLGYETEAFA+YDVM YVKPP
Sbjct: 121 LVPSVTELILAEFLYLQYEDEAKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMRYVKPP 180

Query: 181 IFTLCVGNAWGEAALLLAAGAPGNRSALPSSTIMIKEPIARFQGQATDVEIARKEVRNVK 240
           IFTLCVGNAWGEAALLLAAGA GNRSALPSSTIM+K+PIARFQGQATD+E+ARKEVRNVK
Sbjct: 181 IFTLCVGNAWGEAALLLAAGARGNRSALPSSTIMMKQPIARFQGQATDIELARKEVRNVK 240

Query: 241 AELVKLYAKHIGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERATEDRGVVSDLKK 300
           AELVKLYAKHIGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNER+ EDRGVVSDLKK
Sbjct: 241 AELVKLYAKHIGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERSPEDRGVVSDLKK 300

Query: 301 AQLI 305
           AQLI
Sbjct: 301 AQLI 304

[Close]

BLAST of CsaV3_3G002300 vs. NCBI nr
Match: XP_023005482.1 (ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic [Cucurbita maxima])

HSP 1 Score: 534.3 bits (1375), Expect = 7.1e-148
Identity = 271/304 (89.14%), Postives = 288/304 (94.74%), Query Frame = 0


Query: 1   MEVATTASSFALTKRISPLITSSHNGKSNRTLSMSSSSVRMAPLSTNFLIPFAGGSVSGE 60
           MEVATTAS+F+LTKRISPL  SSH+ KS RT+S+S SS+R  PLSTNFLIPF GGSVSG+
Sbjct: 1   MEVATTASTFSLTKRISPLTASSHHRKSTRTMSLSPSSLRTKPLSTNFLIPFVGGSVSGD 60

Query: 61  FSGVKLRPSSLNPNYSPGSKGKRGVVTMVIPFARGSAWEQPPPDLASYLYKNRIVYLGMS 120
           FSGVKLRPSSLNP+   GSKGKRGVVTMVIPF+RGSAWEQPPPDLASYLYKNRIVYLGMS
Sbjct: 61  FSGVKLRPSSLNPDSFRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS 120

Query: 121 LVPSVTELILAEFLYLQYEDETKPIYLYVNSTGTTKGGEKLGYETEAFAVYDVMSYVKPP 180
           LVPSVTELILAEFLYLQYEDE KPIYLY+NSTGTTKGGEKLGYETEAFAVYDVM Y+KPP
Sbjct: 121 LVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKGGEKLGYETEAFAVYDVMRYIKPP 180

Query: 181 IFTLCVGNAWGEAALLLAAGAPGNRSALPSSTIMIKEPIARFQGQATDVEIARKEVRNVK 240
           IFTLCVGNAWGEA+LLL+AGA GNRSALPSSTIM+K+PIARFQGQATDVE+ARKE+RNVK
Sbjct: 181 IFTLCVGNAWGEASLLLSAGAKGNRSALPSSTIMMKQPIARFQGQATDVELARKEIRNVK 240

Query: 241 AELVKLYAKHIGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERATEDRGVVSDLKK 300
           AELVKLYAKHIGKS EEIEADIRRPKYFSPSEAVEYGIIDKVLYNER TEDRGVVSDLKK
Sbjct: 241 AELVKLYAKHIGKSPEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERGTEDRGVVSDLKK 300

Query: 301 AQLI 305
           AQLI
Sbjct: 301 AQLI 304

[Close]

BLAST of CsaV3_3G002300 vs. ExPASy Swiss-Prot
Match: Q8LB10 (ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLPR4 PE=1 SV=1)

HSP 1 Score: 443.4 bits (1139), Expect = 2.1e-123
Identity = 233/306 (76.14%), Postives = 261/306 (85.29%), Query Frame = 0


Query: 1   MEV-ATTASSF-ALTKRISPLITSSHNGKSNRTLSMSSSSVRMAPLSTNFLIPFAGGSVS 60
           MEV A TA+SF  L  R S +I SS     ++    SSSS+R A LS  FL P+ GGS+S
Sbjct: 1   MEVAAATATSFTTLRARTSAIIPSSTRNLRSKPRFSSSSSLR-ASLSNGFLSPYTGGSIS 60

Query: 61  GEFSGVKLRPSSLNPNYSPGSKGKRGVVTMVIPFARGSAWEQPPPDLASYLYKNRIVYLG 120
            +  G KLR  SLNP     SK KRGVVTMVIPF++GSA EQPPPDLASYL+KNRIVYLG
Sbjct: 61  SDLCGAKLRAESLNPLNFSSSKPKRGVVTMVIPFSKGSAHEQPPPDLASYLFKNRIVYLG 120

Query: 121 MSLVPSVTELILAEFLYLQYEDETKPIYLYVNSTGTTKGGEKLGYETEAFAVYDVMSYVK 180
           MSLVPSVTELILAEFLYLQYEDE KPIYLY+NSTGTTK GEKLGY+TEAFA+YDVM YVK
Sbjct: 121 MSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKNGEKLGYDTEAFAIYDVMGYVK 180

Query: 181 PPIFTLCVGNAWGEAALLLAAGAPGNRSALPSSTIMIKEPIARFQGQATDVEIARKEVRN 240
           PPIFTLCVGNAWGEAALLL AGA GNRSALPSSTIMIK+PIARFQGQATDVEIARKE+++
Sbjct: 181 PPIFTLCVGNAWGEAALLLTAGAKGNRSALPSSTIMIKQPIARFQGQATDVEIARKEIKH 240

Query: 241 VKAELVKLYAKHIGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERATEDRGVVSDL 300
           +K E+VKLY+KHIGKS E+IEAD++RPKYFSP+EAVEYGIIDKV+YNER ++DRGVVSDL
Sbjct: 241 IKTEMVKLYSKHIGKSPEQIEADMKRPKYFSPTEAVEYGIIDKVVYNERGSQDRGVVSDL 300

Query: 301 KKAQLI 305
           KKAQLI
Sbjct: 301 KKAQLI 305

[Close]

BLAST of CsaV3_3G002300 vs. ExPASy Swiss-Prot
Match: Q9L4P4 (Putative ATP-dependent Clp protease proteolytic subunit-like OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=clpR PE=3 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 1.7e-48
Identity = 94/204 (46.08%), Postives = 140/204 (68.63%), Query Frame = 0


Query: 91  PFARGSAWEQPPPDLASYLYKNRIVYLGMSLVPS----------VTELILAEFLYLQYED 150
           P+    ++  PPPDL S L K RI+YLGM L  S          VTELI+A+ LYL++++
Sbjct: 11  PYYGDVSYRTPPPDLPSLLLKERIIYLGMPLFSSDDVKRQVGFDVTELIIAQLLYLEFDN 70

Query: 151 ETKPIYLYVNSTGTT-KGGEKLGYETEAFAVYDVMSYVKPPIFTLCVGNAWGEAALLLAA 210
             KPIY Y+NSTGT+   G+ +GYETEAFA+ D M Y+KPP+ T+C+G A G AA++L+ 
Sbjct: 71  PEKPIYFYINSTGTSWYTGDAIGYETEAFAICDTMRYIKPPVHTICIGQAMGTAAMILSG 130

Query: 211 GAPGNRSALPSSTIMIKEPIARFQGQATDVEIARKEVRNVKAELVKLYAKHIGKSTEEIE 270
           G PGNR++LP +TI++ +P    QGQA+D++I  KEV   K  +++++A++ G+  + + 
Sbjct: 131 GTPGNRASLPHATIVLNQPRTGAQGQASDIQIRAKEVLANKRTMLEIFARNTGQDPDRLA 190

Query: 271 ADIRRPKYFSPSEAVEYGIIDKVL 284
            D  R  Y +P++AVEYG+ID+VL
Sbjct: 191 RDTDRMLYMTPAQAVEYGLIDRVL 214

[Close]

BLAST of CsaV3_3G002300 vs. ExPASy Swiss-Prot
Match: P74466 (Putative ATP-dependent Clp protease proteolytic subunit-like OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=clpR PE=3 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 3.1e-45
Identity = 91/198 (45.96%), Postives = 139/198 (70.20%), Query Frame = 0


Query: 97  AWEQPPPDLASYLYKNRIVYLGMSLVPS----------VTELILAEFLYLQYEDETKPIY 156
           A++ PPPDL S L K RIVYLGM L  S          VT+LI+A+ LYLQ++D  KPIY
Sbjct: 15  AFKTPPPDLESLLLKERIVYLGMPLFSSDEVKQQVGIDVTQLIIAQLLYLQFDDPDKPIY 74

Query: 157 LYVNSTGTT-KGGEKLGYETEAFAVYDVMSYVKPPIFTLCVGNAWGEAALLLAAGAPGNR 216
            Y+NSTGT+   G+ +G+ETEAFA+ D ++Y+KPP+ T+C+G A G AA++L++G  G R
Sbjct: 75  FYINSTGTSWYTGDAVGFETEAFAICDTLNYIKPPVHTICIGQAMGTAAMILSSGTKGYR 134

Query: 217 SALPSSTIMIKEPIARFQGQATDVEIARKEVRNVKAELVKLYAKHIGKSTEEIEADIRRP 276
           ++LP +TI++ +     QGQATD++I  KEV + K  ++++ + + G++ E++  D+ R 
Sbjct: 135 ASLPHATIVLNQNRTGAQGQATDIQIRAKEVISNKQTMLEILSLNTGQTQEKLAKDMDRT 194

Query: 277 KYFSPSEAVEYGIIDKVL 284
            Y +P++A EYG+ID+VL
Sbjct: 195 FYLTPAQAKEYGLIDRVL 212

[Close]

BLAST of CsaV3_3G002300 vs. ExPASy Swiss-Prot
Match: Q7NEW1 (ATP-dependent Clp protease proteolytic subunit 2 OS=Gloeobacter violaceus (strain ATCC 29082 / PCC 7421) OX=251221 GN=clpP2 PE=3 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 7.1e-42
Identity = 94/210 (44.76%), Postives = 128/210 (60.95%), Query Frame = 0


Query: 74  NYSPGSKGKRGVVTMVIPFARGSAWEQPPPDLASYLYKNRIVYLGMSLVPSVTELILAEF 133
           NY PG+        +   ++    +  PPPDL S L   RIVYLG  +   V EL++A+ 
Sbjct: 6   NYGPGA--------IRAAYSGDYGFRTPPPDLPSLLLNERIVYLGTPINDVVAELLIAQL 65

Query: 134 LYLQYEDETKPIYLYVNSTGTTKGGEKLGYETEAFAVYDVMSYVKPPIFTLCVGNAWGEA 193
           LYL+ ED  KPI +Y+NS G        G+ET AFAVYD M +V+ PI T+C+G A G +
Sbjct: 66  LYLESEDNAKPIEIYINSPGVA------GFETSAFAVYDTMRHVRMPIKTICLGLAGGFS 125

Query: 194 ALLLAAGAPGNRSALPSSTIMIKEPIARFQGQATDVEIARKEVRNVKAELVKLYAKHIGK 253
           ALL+AAG  G R +LP+S I++ +P    +GQATD+ I  +E+   K  L +L + H GK
Sbjct: 126 ALLMAAGTKGQRMSLPNSRIILYQPYGGARGQATDINIRAQELLTTKRTLNQLLSIHTGK 185

Query: 254 STEEIEADIRRPKYFSPSEAVEYGIIDKVL 284
           + E+I+ D  R  Y SP EAV YG+IDKVL
Sbjct: 186 TVEQIDKDTERLFYMSPQEAVSYGLIDKVL 201

[Close]

BLAST of CsaV3_3G002300 vs. ExPASy Swiss-Prot
Match: Q8L770 (ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLPR3 PE=1 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 2.1e-41
Identity = 90/187 (48.13%), Postives = 125/187 (66.84%), Query Frame = 0


Query: 101 PPPDLASYLYKNRIVYLGMSLVPSVTELILAEFLYLQYEDETKPIYLYVNSTGTTK-GGE 160
           PPPDL S L   RIVY+GM LVP+VTEL++AE +YLQ+ D  +PIY+Y+NSTGTT+  GE
Sbjct: 118 PPPDLPSMLLDGRIVYIGMPLVPAVTELVVAELMYLQWLDPKEPIYIYINSTGTTRDDGE 177

Query: 161 KLGYETEAFAVYDVMSYVKPPIFTLCVGNAWGEAALLLAAGAPGNRSALPSSTIMIKEPI 220
            +G E+E FA+YD +  +K  + T+CVG A G+A LLL+AG  G R  +P +  MI++P 
Sbjct: 178 TVGMESEGFAIYDSLMQLKNEVHTVCVGAAIGQACLLLSAGTKGKRFMMPHAKAMIQQPR 237

Query: 221 ARFQG--QATDVEIARKEVRNVKAELVKLYAKHIGKSTEEIEADIRRPKYFSPSEAVEYG 280
               G   A+DV I  KEV   +  LV+L +KH G S E +   +RRP Y    +A E+G
Sbjct: 238 VPSSGLMPASDVLIRAKEVITNRDILVELLSKHTGNSVETVANVMRRPYYMDAPKAKEFG 297

Query: 281 IIDKVLY 285
           +ID++L+
Sbjct: 298 VIDRILW 304

[Close]

BLAST of CsaV3_3G002300 vs. ExPASy TrEMBL
Match: A0A0A0L232 (ATP-dependent Clp protease proteolytic subunit OS=Cucumis sativus OX=3659 GN=Csa_3G017170 PE=3 SV=1)

HSP 1 Score: 589.7 bits (1519), Expect = 6.8e-165
Identity = 304/304 (100.00%), Postives = 304/304 (100.00%), Query Frame = 0


Query: 1   MEVATTASSFALTKRISPLITSSHNGKSNRTLSMSSSSVRMAPLSTNFLIPFAGGSVSGE 60
           MEVATTASSFALTKRISPLITSSHNGKSNRTLSMSSSSVRMAPLSTNFLIPFAGGSVSGE
Sbjct: 1   MEVATTASSFALTKRISPLITSSHNGKSNRTLSMSSSSVRMAPLSTNFLIPFAGGSVSGE 60

Query: 61  FSGVKLRPSSLNPNYSPGSKGKRGVVTMVIPFARGSAWEQPPPDLASYLYKNRIVYLGMS 120
           FSGVKLRPSSLNPNYSPGSKGKRGVVTMVIPFARGSAWEQPPPDLASYLYKNRIVYLGMS
Sbjct: 61  FSGVKLRPSSLNPNYSPGSKGKRGVVTMVIPFARGSAWEQPPPDLASYLYKNRIVYLGMS 120

Query: 121 LVPSVTELILAEFLYLQYEDETKPIYLYVNSTGTTKGGEKLGYETEAFAVYDVMSYVKPP 180
           LVPSVTELILAEFLYLQYEDETKPIYLYVNSTGTTKGGEKLGYETEAFAVYDVMSYVKPP
Sbjct: 121 LVPSVTELILAEFLYLQYEDETKPIYLYVNSTGTTKGGEKLGYETEAFAVYDVMSYVKPP 180

Query: 181 IFTLCVGNAWGEAALLLAAGAPGNRSALPSSTIMIKEPIARFQGQATDVEIARKEVRNVK 240
           IFTLCVGNAWGEAALLLAAGAPGNRSALPSSTIMIKEPIARFQGQATDVEIARKEVRNVK
Sbjct: 181 IFTLCVGNAWGEAALLLAAGAPGNRSALPSSTIMIKEPIARFQGQATDVEIARKEVRNVK 240

Query: 241 AELVKLYAKHIGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERATEDRGVVSDLKK 300
           AELVKLYAKHIGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERATEDRGVVSDLKK
Sbjct: 241 AELVKLYAKHIGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERATEDRGVVSDLKK 300

Query: 301 AQLI 305
           AQLI
Sbjct: 301 AQLI 304

[Close]

BLAST of CsaV3_3G002300 vs. ExPASy TrEMBL
Match: A0A5A7THF6 (ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00710 PE=3 SV=1)

HSP 1 Score: 554.3 bits (1427), Expect = 3.2e-154
Identity = 283/304 (93.09%), Postives = 294/304 (96.71%), Query Frame = 0


Query: 1   MEVATTASSFALTKRISPLITSSHNGKSNRTLSMSSSSVRMAPLSTNFLIPFAGGSVSGE 60
           MEVATTASSFALTKRISPL  SS+ GKSNRTLS+SSSSVR APLSTNFLIPFAGGSVSG+
Sbjct: 1   MEVATTASSFALTKRISPLFASSNYGKSNRTLSLSSSSVRTAPLSTNFLIPFAGGSVSGD 60

Query: 61  FSGVKLRPSSLNPNYSPGSKGKRGVVTMVIPFARGSAWEQPPPDLASYLYKNRIVYLGMS 120
           FSGVKLRP SLNPN  PGSKGKRGVVTMVIPF+RGSAWEQPPPDLASYLYKNRIVYLGMS
Sbjct: 61  FSGVKLRPYSLNPNCFPGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS 120

Query: 121 LVPSVTELILAEFLYLQYEDETKPIYLYVNSTGTTKGGEKLGYETEAFAVYDVMSYVKPP 180
           LVPSVTELILAEFLYLQYEDETKPIYLY+NSTGTTKGGEKLGYETEAFA+YDVM YVKPP
Sbjct: 121 LVPSVTELILAEFLYLQYEDETKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMRYVKPP 180

Query: 181 IFTLCVGNAWGEAALLLAAGAPGNRSALPSSTIMIKEPIARFQGQATDVEIARKEVRNVK 240
           IFTLCVGNAWGEAALLLAAGA GNRSALPSSTIMIK+PIARFQGQATDVE+ARKEVRNVK
Sbjct: 181 IFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQPIARFQGQATDVELARKEVRNVK 240

Query: 241 AELVKLYAKHIGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERATEDRGVVSDLKK 300
           AELVKL+AKH+GKSTEEIEADIRRPKYF+PSEAVEYGIIDKVLYNER TEDRGVVSDLKK
Sbjct: 241 AELVKLFAKHVGKSTEEIEADIRRPKYFTPSEAVEYGIIDKVLYNERTTEDRGVVSDLKK 300

Query: 301 AQLI 305
           AQLI
Sbjct: 301 AQLI 304

[Close]

BLAST of CsaV3_3G002300 vs. ExPASy TrEMBL
Match: A0A1S3BJW8 (ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo OX=3656 GN=LOC103490843 PE=3 SV=1)

HSP 1 Score: 554.3 bits (1427), Expect = 3.2e-154
Identity = 283/304 (93.09%), Postives = 294/304 (96.71%), Query Frame = 0


Query: 1   MEVATTASSFALTKRISPLITSSHNGKSNRTLSMSSSSVRMAPLSTNFLIPFAGGSVSGE 60
           MEVATTASSFALTKRISPL  SS+ GKSNRTLS+SSSSVR APLSTNFLIPFAGGSVSG+
Sbjct: 1   MEVATTASSFALTKRISPLFASSNYGKSNRTLSLSSSSVRTAPLSTNFLIPFAGGSVSGD 60

Query: 61  FSGVKLRPSSLNPNYSPGSKGKRGVVTMVIPFARGSAWEQPPPDLASYLYKNRIVYLGMS 120
           FSGVKLRP SLNPN  PGSKGKRGVVTMVIPF+RGSAWEQPPPDLASYLYKNRIVYLGMS
Sbjct: 61  FSGVKLRPYSLNPNCFPGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS 120

Query: 121 LVPSVTELILAEFLYLQYEDETKPIYLYVNSTGTTKGGEKLGYETEAFAVYDVMSYVKPP 180
           LVPSVTELILAEFLYLQYEDETKPIYLY+NSTGTTKGGEKLGYETEAFA+YDVM YVKPP
Sbjct: 121 LVPSVTELILAEFLYLQYEDETKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMRYVKPP 180

Query: 181 IFTLCVGNAWGEAALLLAAGAPGNRSALPSSTIMIKEPIARFQGQATDVEIARKEVRNVK 240
           IFTLCVGNAWGEAALLLAAGA GNRSALPSSTIMIK+PIARFQGQATDVE+ARKEVRNVK
Sbjct: 181 IFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQPIARFQGQATDVELARKEVRNVK 240

Query: 241 AELVKLYAKHIGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERATEDRGVVSDLKK 300
           AELVKL+AKH+GKSTEEIEADIRRPKYF+PSEAVEYGIIDKVLYNER TEDRGVVSDLKK
Sbjct: 241 AELVKLFAKHVGKSTEEIEADIRRPKYFTPSEAVEYGIIDKVLYNERTTEDRGVVSDLKK 300

Query: 301 AQLI 305
           AQLI
Sbjct: 301 AQLI 304

[Close]

BLAST of CsaV3_3G002300 vs. ExPASy TrEMBL
Match: A0A6J1DRW9 (ATP-dependent Clp protease proteolytic subunit OS=Momordica charantia OX=3673 GN=LOC111022646 PE=3 SV=1)

HSP 1 Score: 544.7 bits (1402), Expect = 2.5e-151
Identity = 278/304 (91.45%), Postives = 291/304 (95.72%), Query Frame = 0


Query: 1   MEVATTASSFALTKRISPLITSSHNGKSNRTLSMSSSSVRMAPLSTNFLIPFAGGSVSGE 60
           MEVATTAS+FALTKRISP ITSSHN KSNR LS SSSS+R  PLSTNFL PFAGGSVSG+
Sbjct: 1   MEVATTASTFALTKRISPSITSSHNPKSNRALSFSSSSLRPTPLSTNFLAPFAGGSVSGD 60

Query: 61  FSGVKLRPSSLNPNYSPGSKGKRGVVTMVIPFARGSAWEQPPPDLASYLYKNRIVYLGMS 120
           F+GVKLRPSSLNP+ S GSKGKRGVVTMVIPF+RGSAWEQPPPDLASYLYKNRIVYLGMS
Sbjct: 61  FAGVKLRPSSLNPDSSRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS 120

Query: 121 LVPSVTELILAEFLYLQYEDETKPIYLYVNSTGTTKGGEKLGYETEAFAVYDVMSYVKPP 180
           LVPSVTELILAEFLYLQYEDE KPIYLY+NSTGTTKGGEKLGYETEAFA+YDVM YVKPP
Sbjct: 121 LVPSVTELILAEFLYLQYEDEAKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMRYVKPP 180

Query: 181 IFTLCVGNAWGEAALLLAAGAPGNRSALPSSTIMIKEPIARFQGQATDVEIARKEVRNVK 240
           IFTLCVGNAWGEAALLLAAGA GNRSALPSSTIM+K+PIARFQGQATD+E+ARKEVRNVK
Sbjct: 181 IFTLCVGNAWGEAALLLAAGARGNRSALPSSTIMMKQPIARFQGQATDIELARKEVRNVK 240

Query: 241 AELVKLYAKHIGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERATEDRGVVSDLKK 300
           AELVKLYAKHIGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNER+ EDRGVVSDLKK
Sbjct: 241 AELVKLYAKHIGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERSPEDRGVVSDLKK 300

Query: 301 AQLI 305
           AQLI
Sbjct: 301 AQLI 304

[Close]

BLAST of CsaV3_3G002300 vs. ExPASy TrEMBL
Match: A0A6J1KT89 (ATP-dependent Clp protease proteolytic subunit OS=Cucurbita maxima OX=3661 GN=LOC111498455 PE=3 SV=1)

HSP 1 Score: 534.3 bits (1375), Expect = 3.4e-148
Identity = 271/304 (89.14%), Postives = 288/304 (94.74%), Query Frame = 0


Query: 1   MEVATTASSFALTKRISPLITSSHNGKSNRTLSMSSSSVRMAPLSTNFLIPFAGGSVSGE 60
           MEVATTAS+F+LTKRISPL  SSH+ KS RT+S+S SS+R  PLSTNFLIPF GGSVSG+
Sbjct: 1   MEVATTASTFSLTKRISPLTASSHHRKSTRTMSLSPSSLRTKPLSTNFLIPFVGGSVSGD 60

Query: 61  FSGVKLRPSSLNPNYSPGSKGKRGVVTMVIPFARGSAWEQPPPDLASYLYKNRIVYLGMS 120
           FSGVKLRPSSLNP+   GSKGKRGVVTMVIPF+RGSAWEQPPPDLASYLYKNRIVYLGMS
Sbjct: 61  FSGVKLRPSSLNPDSFRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS 120

Query: 121 LVPSVTELILAEFLYLQYEDETKPIYLYVNSTGTTKGGEKLGYETEAFAVYDVMSYVKPP 180
           LVPSVTELILAEFLYLQYEDE KPIYLY+NSTGTTKGGEKLGYETEAFAVYDVM Y+KPP
Sbjct: 121 LVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKGGEKLGYETEAFAVYDVMRYIKPP 180

Query: 181 IFTLCVGNAWGEAALLLAAGAPGNRSALPSSTIMIKEPIARFQGQATDVEIARKEVRNVK 240
           IFTLCVGNAWGEA+LLL+AGA GNRSALPSSTIM+K+PIARFQGQATDVE+ARKE+RNVK
Sbjct: 181 IFTLCVGNAWGEASLLLSAGAKGNRSALPSSTIMMKQPIARFQGQATDVELARKEIRNVK 240

Query: 241 AELVKLYAKHIGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERATEDRGVVSDLKK 300
           AELVKLYAKHIGKS EEIEADIRRPKYFSPSEAVEYGIIDKVLYNER TEDRGVVSDLKK
Sbjct: 241 AELVKLYAKHIGKSPEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERGTEDRGVVSDLKK 300

Query: 301 AQLI 305
           AQLI
Sbjct: 301 AQLI 304

[Close]

BLAST of CsaV3_3G002300 vs. TAIR 10
Match: AT4G17040.1 (CLP protease R subunit 4 )

HSP 1 Score: 443.4 bits (1139), Expect = 1.5e-124
Identity = 233/306 (76.14%), Postives = 261/306 (85.29%), Query Frame = 0


Query: 1   MEV-ATTASSF-ALTKRISPLITSSHNGKSNRTLSMSSSSVRMAPLSTNFLIPFAGGSVS 60
           MEV A TA+SF  L  R S +I SS     ++    SSSS+R A LS  FL P+ GGS+S
Sbjct: 1   MEVAAATATSFTTLRARTSAIIPSSTRNLRSKPRFSSSSSLR-ASLSNGFLSPYTGGSIS 60

Query: 61  GEFSGVKLRPSSLNPNYSPGSKGKRGVVTMVIPFARGSAWEQPPPDLASYLYKNRIVYLG 120
            +  G KLR  SLNP     SK KRGVVTMVIPF++GSA EQPPPDLASYL+KNRIVYLG
Sbjct: 61  SDLCGAKLRAESLNPLNFSSSKPKRGVVTMVIPFSKGSAHEQPPPDLASYLFKNRIVYLG 120

Query: 121 MSLVPSVTELILAEFLYLQYEDETKPIYLYVNSTGTTKGGEKLGYETEAFAVYDVMSYVK 180
           MSLVPSVTELILAEFLYLQYEDE KPIYLY+NSTGTTK GEKLGY+TEAFA+YDVM YVK
Sbjct: 121 MSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKNGEKLGYDTEAFAIYDVMGYVK 180

Query: 181 PPIFTLCVGNAWGEAALLLAAGAPGNRSALPSSTIMIKEPIARFQGQATDVEIARKEVRN 240
           PPIFTLCVGNAWGEAALLL AGA GNRSALPSSTIMIK+PIARFQGQATDVEIARKE+++
Sbjct: 181 PPIFTLCVGNAWGEAALLLTAGAKGNRSALPSSTIMIKQPIARFQGQATDVEIARKEIKH 240

Query: 241 VKAELVKLYAKHIGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERATEDRGVVSDL 300
           +K E+VKLY+KHIGKS E+IEAD++RPKYFSP+EAVEYGIIDKV+YNER ++DRGVVSDL
Sbjct: 241 IKTEMVKLYSKHIGKSPEQIEADMKRPKYFSPTEAVEYGIIDKVVYNERGSQDRGVVSDL 300

Query: 301 KKAQLI 305
           KKAQLI
Sbjct: 301 KKAQLI 305

[Close]

BLAST of CsaV3_3G002300 vs. TAIR 10
Match: AT1G09130.1 (ATP-dependent caseinolytic (Clp) protease/crotonase family protein )

HSP 1 Score: 171.0 bits (432), Expect = 1.5e-42
Identity = 90/187 (48.13%), Postives = 125/187 (66.84%), Query Frame = 0


Query: 101 PPPDLASYLYKNRIVYLGMSLVPSVTELILAEFLYLQYEDETKPIYLYVNSTGTTK-GGE 160
           PPPDL S L   RIVY+GM LVP+VTEL++AE +YLQ+ D  +PIY+Y+NSTGTT+  GE
Sbjct: 118 PPPDLPSMLLDGRIVYIGMPLVPAVTELVVAELMYLQWLDPKEPIYIYINSTGTTRDDGE 177

Query: 161 KLGYETEAFAVYDVMSYVKPPIFTLCVGNAWGEAALLLAAGAPGNRSALPSSTIMIKEPI 220
            +G E+E FA+YD +  +K  + T+CVG A G+A LLL+AG  G R  +P +  MI++P 
Sbjct: 178 TVGMESEGFAIYDSLMQLKNEVHTVCVGAAIGQACLLLSAGTKGKRFMMPHAKAMIQQPR 237

Query: 221 ARFQG--QATDVEIARKEVRNVKAELVKLYAKHIGKSTEEIEADIRRPKYFSPSEAVEYG 280
               G   A+DV I  KEV   +  LV+L +KH G S E +   +RRP Y    +A E+G
Sbjct: 238 VPSSGLMPASDVLIRAKEVITNRDILVELLSKHTGNSVETVANVMRRPYYMDAPKAKEFG 297

Query: 281 IIDKVLY 285
           +ID++L+
Sbjct: 298 VIDRILW 304

[Close]

BLAST of CsaV3_3G002300 vs. TAIR 10
Match: AT1G09130.2 (ATP-dependent caseinolytic (Clp) protease/crotonase family protein )

HSP 1 Score: 171.0 bits (432), Expect = 1.5e-42
Identity = 90/187 (48.13%), Postives = 125/187 (66.84%), Query Frame = 0


Query: 101 PPPDLASYLYKNRIVYLGMSLVPSVTELILAEFLYLQYEDETKPIYLYVNSTGTTK-GGE 160
           PPPDL S L   RIVY+GM LVP+VTEL++AE +YLQ+ D  +PIY+Y+NSTGTT+  GE
Sbjct: 118 PPPDLPSMLLDGRIVYIGMPLVPAVTELVVAELMYLQWLDPKEPIYIYINSTGTTRDDGE 177

Query: 161 KLGYETEAFAVYDVMSYVKPPIFTLCVGNAWGEAALLLAAGAPGNRSALPSSTIMIKEPI 220
            +G E+E FA+YD +  +K  + T+CVG A G+A LLL+AG  G R  +P +  MI++P 
Sbjct: 178 TVGMESEGFAIYDSLMQLKNEVHTVCVGAAIGQACLLLSAGTKGKRFMMPHAKAMIQQPR 237

Query: 221 ARFQG--QATDVEIARKEVRNVKAELVKLYAKHIGKSTEEIEADIRRPKYFSPSEAVEYG 280
               G   A+DV I  KEV   +  LV+L +KH G S E +   +RRP Y    +A E+G
Sbjct: 238 VPSSGLMPASDVLIRAKEVITNRDILVELLSKHTGNSVETVANVMRRPYYMDAPKAKEFG 297

Query: 281 IIDKVLY 285
           +ID++L+
Sbjct: 298 VIDRILW 304

[Close]

BLAST of CsaV3_3G002300 vs. TAIR 10
Match: AT1G09130.3 (ATP-dependent caseinolytic (Clp) protease/crotonase family protein )

HSP 1 Score: 171.0 bits (432), Expect = 1.5e-42
Identity = 90/187 (48.13%), Postives = 125/187 (66.84%), Query Frame = 0


Query: 101 PPPDLASYLYKNRIVYLGMSLVPSVTELILAEFLYLQYEDETKPIYLYVNSTGTTK-GGE 160
           PPPDL S L   RIVY+GM LVP+VTEL++AE +YLQ+ D  +PIY+Y+NSTGTT+  GE
Sbjct: 118 PPPDLPSMLLDGRIVYIGMPLVPAVTELVVAELMYLQWLDPKEPIYIYINSTGTTRDDGE 177

Query: 161 KLGYETEAFAVYDVMSYVKPPIFTLCVGNAWGEAALLLAAGAPGNRSALPSSTIMIKEPI 220
            +G E+E FA+YD +  +K  + T+CVG A G+A LLL+AG  G R  +P +  MI++P 
Sbjct: 178 TVGMESEGFAIYDSLMQLKNEVHTVCVGAAIGQACLLLSAGTKGKRFMMPHAKAMIQQPR 237

Query: 221 ARFQG--QATDVEIARKEVRNVKAELVKLYAKHIGKSTEEIEADIRRPKYFSPSEAVEYG 280
               G   A+DV I  KEV   +  LV+L +KH G S E +   +RRP Y    +A E+G
Sbjct: 238 VPSSGLMPASDVLIRAKEVITNRDILVELLSKHTGNSVETVANVMRRPYYMDAPKAKEFG 297

Query: 281 IIDKVLY 285
           +ID++L+
Sbjct: 298 VIDRILW 304

[Close]

BLAST of CsaV3_3G002300 vs. TAIR 10
Match: AT1G49970.1 (CLP protease proteolytic subunit 1 )

HSP 1 Score: 160.2 bits (404), Expect = 2.6e-39
Identity = 89/193 (46.11%), Postives = 124/193 (64.25%), Query Frame = 0


Query: 95  GSAWEQP---PPDLASYLYKNRIVYLGMSLVPSVTELILAEFLYLQYEDETKPIYLYVNS 154
           G   E+P   PPDL S L   RI YLGM +VP+VTEL++A+F++L Y++ TKPIYLY+NS
Sbjct: 159 GGGSERPRTAPPDLPSLLLDARICYLGMPIVPAVTELLVAQFMWLDYDNPTKPIYLYINS 218

Query: 155 TGT-TKGGEKLGYETEAFAVYDVMSYVKPPIFTLCVGNAWGEAALLLAAGAPGNRSALP- 214
            GT  +  E +G ETEA+A+ D +SY K  ++T+  G A+G+AA+LL+ G  G R+  P 
Sbjct: 219 PGTQNEKMETVGSETEAYAIADTISYCKSDVYTINCGMAFGQAAMLLSLGKKGYRAVQPH 278

Query: 215 SSTIMIKEPIARFQGQATDVEIARKEVRNVKAELVKLYAKHIGKSTEEIEADIRRPKYFS 274
           SST +    + R  G A D+ I  KE+       ++L AK  GKS E+I  DI+RPKY  
Sbjct: 279 SSTKLYLPKVNRSSGAAIDMWIKAKELDANTEYYIELLAKGTGKSKEQINEDIKRPKYLQ 338

Query: 275 PSEAVEYGIIDKV 283
              A++YGI DK+
Sbjct: 339 AQAAIDYGIADKI 351

The following BLAST results are available for this feature:

BLAST of CsaV3_3G002300 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147236.1	1.4e-164	100.00	ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic ...	[more]
XP_008448778.1	6.6e-154	93.09	PREDICTED: ATP-dependent Clp protease proteolytic subunit-related protein 4, chl...	[more]
XP_038902969.1	8.6e-154	93.09	ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic ...	[more]
XP_022155521.1	5.2e-151	91.45	ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic ...	[more]
XP_023005482.1	7.1e-148	89.14	ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic ...	[more]

BLAST of CsaV3_3G002300 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LB10	2.1e-123	76.14	ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic ...	[more]
Q9L4P4	1.7e-48	46.08	Putative ATP-dependent Clp protease proteolytic subunit-like OS=Synechococcus el...	[more]
P74466	3.1e-45	45.96	Putative ATP-dependent Clp protease proteolytic subunit-like OS=Synechocystis sp...	[more]
Q7NEW1	7.1e-42	44.76	ATP-dependent Clp protease proteolytic subunit 2 OS=Gloeobacter violaceus (strai...	[more]
Q8L770	2.1e-41	48.13	ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic ...	[more]

BLAST of CsaV3_3G002300 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L232	6.8e-165	100.00	ATP-dependent Clp protease proteolytic subunit OS=Cucumis sativus OX=3659 GN=Csa...	[more]
A0A5A7THF6	3.2e-154	93.09	ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo var. makuwa OX=11...	[more]
A0A1S3BJW8	3.2e-154	93.09	ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A6J1DRW9	2.5e-151	91.45	ATP-dependent Clp protease proteolytic subunit OS=Momordica charantia OX=3673 GN...	[more]
A0A6J1KT89	3.4e-148	89.14	ATP-dependent Clp protease proteolytic subunit OS=Cucurbita maxima OX=3661 GN=LO...	[more]

BLAST of CsaV3_3G002300 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G17040.1	1.5e-124	76.14	CLP protease R subunit 4	[more]
AT1G09130.1	1.5e-42	48.13	ATP-dependent caseinolytic (Clp) protease/crotonase family protein	[more]
AT1G09130.2	1.5e-42	48.13	ATP-dependent caseinolytic (Clp) protease/crotonase family protein	[more]
AT1G09130.3	1.5e-42	48.13	ATP-dependent caseinolytic (Clp) protease/crotonase family protein	[more]
AT1G49970.1	2.6e-39	46.11	CLP protease proteolytic subunit 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 229..249
None	No IPR available	GENE3D	3.90.226.10		coord: 77..291 e-value: 5.2E-65 score: 220.8
None	No IPR available	PANTHER	PTHR10381:SF65	ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT	coord: 14..303
IPR001907	ATP-dependent Clp protease proteolytic subunit	PRINTS	PR00127	CLPPROTEASEP	coord: 204..223 score: 38.0 coord: 261..280 score: 44.62 coord: 104..119 score: 40.62 coord: 183..200 score: 48.06 coord: 144..164 score: 29.88
IPR001907	ATP-dependent Clp protease proteolytic subunit	CDD	cd07017	S14_ClpP_2	coord: 104..282 e-value: 8.91818E-70 score: 212.302
IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	PFAM	PF00574	CLP_protease	coord: 104..284 e-value: 8.2E-50 score: 169.2
IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	PANTHER	PTHR10381	ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT	coord: 14..303
IPR029045	ClpP/crotonase-like domain superfamily	SUPERFAMILY	52096	ClpP/crotonase	coord: 99..288

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G002300.1	CsaV3_3G002300.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
molecular_function	GO:0004176	ATP-dependent peptidase activity
molecular_function	GO:0004252	serine-type endopeptidase activity