CsaV3_3G001660 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G001660
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	glycine-rich cell wall structural protein 1.8-like
Location	chr3: 1269733 .. 1270966 (+)
RNA-Seq Expression	CsaV3_3G001660
Synteny	CsaV3_3G001660

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGGGATCAGAAGATGCATTGTAAGCATAGGCCTCGTGTTTTGAGTTCCTATGGAGAATCATAGAGTACAATTCCTTGCTTTGTTTGCTTTATTGGGTTTAGGGTTAGCTTCGGCCGCCAGAACTCTTATTGCTTATGATGGCGATGTCCATGCCCCTGTGTTAGGGCATACTTCTGTTGGATATGGTGGTGGAGAAGGAGCTGGTAGTGGATATGGAGTTAGCGTTGGATATGGCGGTGGTGGAGGAGGAGGACGTGGTGGTGGGGGTGGTTCTACAAATGGTGGTGTTGGATATGGAAATGGTGGAGGTGAAGGAAGTGGCGCTGGATATGGAGGTGGAGAAGAACGTGGTTATGGCAATGGTGGTGGTGGGGGAGGGGGAGGAAGTGGTGGTGGTGGTGGTGGTGGAAGTGGTGTCAGATATGGCCCGGTCGGTGGTTATGGAAGTGGAGAAGGAGGTGGTTCTGGTGGTGGTTATGGAGGCGGGGGATCGGGTTATGGAGGTGGTGGAGGTGGTGGCGGTGGTGGAAATGGAGGTGGTAGTGGTGGTTATGGTGCAGGAGAAGCGAGCGGAGGAGGATATGGAAGTGGTGGAGGACAAGGAGGAGGCTCAGGGAGCGGAGGGGGAGGGCATGGAGGCGGCGGAGGAGGCGGTTGGGGAGGTGGGTATGGTAGTGGAGGAAATGGTGGTGGATATGGAAGTGGCGGAGGAGAAGGAGGAGGCTCAGGGAGTGGAGCAGGAGGACATGGAGGTGGCGGAGGAGGTGGCTCCGGCGGTGGCTATGGTGGTGGTGGAGGTGCACAAGGAGGAGGGTACGGAGGTGGGGGAGGGAGTGGAGGAGGGGGTGGTGGATATGCACCTTGATTCTATTTTATTATCTCAACAAAAAGGAAAATAATTTAAGAAGAAGAAGAAAGGTTATAAAGAAGAGTACTATTGATTACATTTTATGTTCTTAATAAATGAAGTTTACTATAGGGATGATAGTGATTGAAGAATGGGAAATTAGGGACTCTTATTTCATTTGGAAACCCTTCCTTTTGATCATCTTTCCCTAATCTGTATTTGTATTTTGTGTCATGTGATTTTCAATTCTAAATATGCAATTAATTGTAATTGTGATTTACAACTTTTCCATTCATTTGTGCTCCATCTAAATGTATGTAAACATGAGATTGATGATCACTATATTCATTCATCCAACATACAAATTCAATCGTTATTTTTACCGA

mRNA sequence

ATGGAGAATCATAGAGTACAATTCCTTGCTTTGTTTGCTTTATTGGGTTTAGGGTTAGCTTCGGCCGCCAGAACTCTTATTGCTTATGATGGCGATGTCCATGCCCCTGTGTTAGGGCATACTTCTGTTGGATATGGTGGTGGAGAAGGAGCTGGTAGTGGATATGGAGTTAGCGTTGGATATGGCGGTGGTGGAGGAGGAGGACGTGGTGGTGGGGGTGGTTCTACAAATGGTGGTGTTGGATATGGAAATGGTGGAGGTGAAGGAAGTGGCGCTGGATATGGAGGTGGAGAAGAACGTGGTTATGGCAATGGTGGTGGTGGGGGAGGGGGAGGAAGTGGTGGTGGTGGTGGTGGTGGAAGTGGTGTCAGATATGGCCCGGTCGGTGGTTATGGAAGTGGAGAAGGAGGTGGTTCTGGTGGTGGTTATGGAGGCGGGGGATCGGGTTATGGAGGTGGTGGAGGTGGTGGCGGTGGTGGAAATGGAGGTGGTAGTGGTGGTTATGGTGCAGGAGAAGCGAGCGGAGGAGGATATGGAAGTGGTGGAGGACAAGGAGGAGGCTCAGGGAGCGGAGGGGGAGGGCATGGAGGCGGCGGAGGAGGCGGTTGGGGAGGTGGGTATGGTAGTGGAGGAAATGGTGGTGGATATGGAAGTGGCGGAGGAGAAGGAGGAGGCTCAGGGAGTGGAGCAGGAGGACATGGAGGTGGCGGAGGAGGTGGCTCCGGCGGTGGCTATGGTGGTGGTGGAGGTGCACAAGGAGGAGGGTACGGAGGTGGGGGAGGGAGTGGAGGAGGGGGTGGTGGATATGCACCTTGA

Coding sequence (CDS)

ATGGAGAATCATAGAGTACAATTCCTTGCTTTGTTTGCTTTATTGGGTTTAGGGTTAGCTTCGGCCGCCAGAACTCTTATTGCTTATGATGGCGATGTCCATGCCCCTGTGTTAGGGCATACTTCTGTTGGATATGGTGGTGGAGAAGGAGCTGGTAGTGGATATGGAGTTAGCGTTGGATATGGCGGTGGTGGAGGAGGAGGACGTGGTGGTGGGGGTGGTTCTACAAATGGTGGTGTTGGATATGGAAATGGTGGAGGTGAAGGAAGTGGCGCTGGATATGGAGGTGGAGAAGAACGTGGTTATGGCAATGGTGGTGGTGGGGGAGGGGGAGGAAGTGGTGGTGGTGGTGGTGGTGGAAGTGGTGTCAGATATGGCCCGGTCGGTGGTTATGGAAGTGGAGAAGGAGGTGGTTCTGGTGGTGGTTATGGAGGCGGGGGATCGGGTTATGGAGGTGGTGGAGGTGGTGGCGGTGGTGGAAATGGAGGTGGTAGTGGTGGTTATGGTGCAGGAGAAGCGAGCGGAGGAGGATATGGAAGTGGTGGAGGACAAGGAGGAGGCTCAGGGAGCGGAGGGGGAGGGCATGGAGGCGGCGGAGGAGGCGGTTGGGGAGGTGGGTATGGTAGTGGAGGAAATGGTGGTGGATATGGAAGTGGCGGAGGAGAAGGAGGAGGCTCAGGGAGTGGAGCAGGAGGACATGGAGGTGGCGGAGGAGGTGGCTCCGGCGGTGGCTATGGTGGTGGTGGAGGTGCACAAGGAGGAGGGTACGGAGGTGGGGGAGGGAGTGGAGGAGGGGGTGGTGGATATGCACCTTGA

Protein sequence

MENHRVQFLALFALLGLGLASAARTLIAYDGDVHAPVLGHTSVGYGGGEGAGSGYGVSVGYGGGGGGGRGGGGGSTNGGVGYGNGGGEGSGAGYGGGEERGYGNGGGGGGGGSGGGGGGGSGVRYGPVGGYGSGEGGGSGGGYGGGGSGYGGGGGGGGGGNGGGSGGYGAGEASGGGYGSGGGQGGGSGSGGGGHGGGGGGGWGGGYGSGGNGGGYGSGGGEGGGSGSGAGGHGGGGGGGSGGGYGGGGGAQGGGYGGGGGSGGGGGGYAP*

Homology

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BLAST of CsaV3_3G001660 vs. NCBI nr
Match: XP_011652713.1 (glycine-rich cell wall structural protein 2 [Cucumis sativus] >KGN55754.1 hypothetical protein Csa_011047 [Cucumis sativus])

HSP 1 Score: 302.8 bits (774), Expect = 3.1e-78
Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 0


Query: 1   MENHRVQFLALFALLGLGLASAARTLIAYDGDVHAPVLGHTSVGYGGGEGAGSGYGVSVG 60
           MENHRVQFLALFALLGLGLASAARTLIAYDGDVHAPVLGHTSVGYGGGEGAGSGYGVSVG
Sbjct: 1   MENHRVQFLALFALLGLGLASAARTLIAYDGDVHAPVLGHTSVGYGGGEGAGSGYGVSVG 60

Query: 61  YGGGGGGGRGGGGGSTNGGVGYGNGGGEGSGAGYGGGEERGYGNGGGGGGGGSGGGGGGG 120
           YGGGGGGGRGGGGGSTNGGVGYGNGGGEGSGAGYGGGEERGYGNGGGGGGGGSGGGGGGG
Sbjct: 61  YGGGGGGGRGGGGGSTNGGVGYGNGGGEGSGAGYGGGEERGYGNGGGGGGGGSGGGGGGG 120

Query: 121 SGVRYGPVGGYGSGEGGGSGGGYGGGGSGYGGGGGGGGGGNGGGSGGYGAGEASGGGYGS 180
           SGVRYGPVGGYGSGEGGGSGGGYGGGGSGYGGGGGGGGGGNGGGSGGYGAGEASGGGYGS
Sbjct: 121 SGVRYGPVGGYGSGEGGGSGGGYGGGGSGYGGGGGGGGGGNGGGSGGYGAGEASGGGYGS 180

Query: 181 GGGQGGGSGSGGGGHGGGGGGGWGGGYGSGGNGGGYGSGGGEGGGSGSGAGGHGGGGGGG 240
           GGGQGGGSGSGGGGHGGGGGGGWGGGYGSGGNGGGYGSGGGEGGGSGSGAGGHGGGGGGG
Sbjct: 181 GGGQGGGSGSGGGGHGGGGGGGWGGGYGSGGNGGGYGSGGGEGGGSGSGAGGHGGGGGGG 240

Query: 241 SGGGYGGGGGAQGGGYGGGGGSGGGGGGYAP 272
           SGGGYGGGGGAQGGGYGGGGGSGGGGGGYAP
Sbjct: 241 SGGGYGGGGGAQGGGYGGGGGSGGGGGGYAP 271

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BLAST of CsaV3_3G001660 vs. NCBI nr
Match: XP_038903688.1 (glycine-rich cell wall structural protein 1.8-like [Benincasa hispida])

HSP 1 Score: 211.8 bits (538), Expect = 7.2e-51
Identity = 238/275 (86.55%), Postives = 247/275 (89.82%), Query Frame = 0


Query: 1   MENHRVQFLALFALLGLGLASAARTLIAYDGDVHAPVLGHTSVGYGGGEGAGSGYGVSVG 60
           MENHRVQ+LA FA LGLGLASAARTLIAYDG+VHAPVLGH S+GYGGGEGAG GYGV+VG
Sbjct: 1   MENHRVQYLAFFAFLGLGLASAARTLIAYDGNVHAPVLGHVSIGYGGGEGAGGGYGVTVG 60

Query: 61  YGGGGGGGRGGGGGSTNGGVGYGNGGGEGSGAGYGGGEERGYGNGGGGGGGGSGGGGGGG 120
           YGGGGGGGRGGGGGST+GGVGYG+GGGEGSGAGYGGGEERGYGNGGGGGGGGSGGGGG G
Sbjct: 61  YGGGGGGGRGGGGGSTDGGVGYGSGGGEGSGAGYGGGEERGYGNGGGGGGGGSGGGGGVG 120

Query: 121 SGVRYGPVGGYGSGEGGGSGGGYGGGGSGYGGGGGGGGGGNGGGSGGYGAGEASGGGYGS 180
            G  YGP GGYG+G G GSGGGYG GGSGY   GGGGGGGNGGG GGYGAG A+GGGYGS
Sbjct: 121 VG--YGPGGGYGNGGGAGSGGGYGNGGSGY---GGGGGGGNGGG-GGYGAGGANGGGYGS 180

Query: 181 GGGQGGGSGSGGGGHGGGGGGGWGGGYGSGG-NGGGYGSGGGEGGGSGSGAGGHGGGGGG 240
           GGGQGGGSGSG GGHGGGGGGG GGGYG GG NGGGYGSGGG+GGGSGSGAGG GGGGGG
Sbjct: 181 GGGQGGGSGSGAGGHGGGGGGGSGGGYGGGGENGGGYGSGGGQGGGSGSGAGGRGGGGGG 240

Query: 241 GSGGGYGGGGGAQGGGYGGGGGSGGG---GGGYAP 272
           GSGGGY GGGGAQGGGYG GGGSG G   GGGYAP
Sbjct: 241 GSGGGY-GGGGAQGGGYGAGGGSGEGGGYGGGYAP 268

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BLAST of CsaV3_3G001660 vs. NCBI nr
Match: XP_022923391.1 (glycine-rich cell wall structural protein 1.8-like isoform X1 [Cucurbita moschata] >XP_022923392.1 glycine-rich cell wall structural protein 1.8-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 183.7 bits (465), Expect = 2.1e-42
Identity = 224/276 (81.16%), Postives = 231/276 (83.70%), Query Frame = 0


Query: 1   MENHRVQFLALFALLGLGLASAARTLIAYDGDVHAPVLGHTSVGYGGGEGAGSGYGVSVG 60
           MENH +Q+L  FALLG GLASAARTL+AYD +V  PVLG  SVGYGGGEG GSGYGV+ G
Sbjct: 1   MENHAMQYLVFFALLGFGLASAARTLVAYDANVQVPVLGRVSVGYGGGEGGGSGYGVTTG 60

Query: 61  Y-GGGGGGGRGGGGGSTNGGVGYGNGGGEGSGAGYGGGEERGYGNGGGGGGGGSGGGGGG 120
           Y GGGGGGGRGGGGGS  GGVGYGNGGGEGSGAGYGGGE+RGYGNGGGGGGG  GG GGG
Sbjct: 61  YAGGGGGGGRGGGGGSGYGGVGYGNGGGEGSGAGYGGGEDRGYGNGGGGGGGSGGGSGGG 120

Query: 121 GSGVRYGPVGGYGSGEGGGSGGGYGGGGSGYGGGGGGGGGGNGGGSGGYGAGEASGGGYG 180
                YGP GGYGSG G GSGGGYG GG GYGGGGGGG     GG GGYGAG A+GGGYG
Sbjct: 121 -----YGPGGGYGSGGGAGSGGGYGSGGVGYGGGGGGG----SGGGGGYGAGGANGGGYG 180

Query: 181 SGGGQGGGSGSGGGGHGGGGGGGWGGGYGSGG-NGGGYGSGGGEGGGSGSGAGGHGGGGG 240
           SGGGQGGGSGSG GGHGGGGGGG GGGYG GG NGGGYGSGGG GGGSGSGAGGHGGGGG
Sbjct: 181 SGGGQGGGSGSGAGGHGGGGGGGSGGGYGGGGANGGGYGSGGGGGGGSGSGAGGHGGGGG 240

Query: 241 GGSGGGYGGGGGAQGGGYGGGGGS---GGGGGGYAP 272
           GGSGGGY GGGGAQGGGYG GGGS   GG GGGYAP
Sbjct: 241 GGSGGGY-GGGGAQGGGYGAGGGSGQGGGHGGGYAP 266

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BLAST of CsaV3_3G001660 vs. NCBI nr
Match: KAG6577707.1 (hypothetical protein SDJN03_25281, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 181.0 bits (458), Expect = 1.4e-41
Identity = 205/253 (81.03%), Postives = 213/253 (84.19%), Query Frame = 0


Query: 1   MENHRVQFLALFALLGLGLASAARTLIAYDGDVHAPVLGHTSVGYGGGEGAGSGYGVSVG 60
           MENH +Q+L  FALLG GLASAARTL+AYD +V  PVLG  SVGYGGGEG GSGYGV+ G
Sbjct: 1   MENHAMQYLVFFALLGFGLASAARTLVAYDANVQVPVLGRVSVGYGGGEGGGSGYGVTTG 60

Query: 61  YGGGGGGGRGGGGGSTNGGVGYGNGGGEGSGAGYGGGEERGYGNGGGGGGGGSGGGGGGG 120
           Y GGGGGGRGGGGGS  GGVGYGNGGGEGSGAGYGGGE+RGYGNGGGGGGG  GG GGG 
Sbjct: 61  YAGGGGGGRGGGGGSGYGGVGYGNGGGEGSGAGYGGGEDRGYGNGGGGGGGSGGGSGGG- 120

Query: 121 SGVRYGPVGGYGSGEGGGSGGGYGGGGSGYGGGGGGGGGGNGGGSGGYGAGEASGGGYGS 180
               YGP GGYGSG G GSGGGYG GG GYGGGGGGG     GG GGYGAG A+GGGYGS
Sbjct: 121 ----YGPGGGYGSGGGAGSGGGYGSGGVGYGGGGGGG----SGGGGGYGAGGANGGGYGS 180

Query: 181 GGGQGGGSGSGGGGHGGGGGGGWGGGYGSGG-NGGGYGSGGGEGGGSGSGAGGHGGGGGG 240
           GGGQGGGSGSG GGHGGGGGGG GGGYG GG NGGGYGSGGGEGGGSGSGAGGHGGGGGG
Sbjct: 181 GGGQGGGSGSGTGGHGGGGGGGSGGGYGGGGANGGGYGSGGGEGGGSGSGAGGHGGGGGG 240

Query: 241 GSGGGYGGGGGAQ 253
           GSGGGYGGGG  +
Sbjct: 241 GSGGGYGGGGAKE 244

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BLAST of CsaV3_3G001660 vs. NCBI nr
Match: XP_016900590.1 (PREDICTED: glycine-rich cell wall structural protein 1.8-like [Cucumis melo])

HSP 1 Score: 178.3 bits (451), Expect = 8.8e-41
Identity = 199/271 (73.43%), Postives = 203/271 (74.91%), Query Frame = 0


Query: 1   MENHRVQFLALFALLGLGLASAARTLIAYDGDVHAPVLGHTSVGYGGGEGAGSGYGVSVG 60
           MENHRVQFLALFALLGLGLASAARTLIAYDGDV  PVLGHTSVGYGGGEG GSGYG+S+G
Sbjct: 1   MENHRVQFLALFALLGLGLASAARTLIAYDGDVRVPVLGHTSVGYGGGEGGGSGYGLSLG 60

Query: 61  YGGGGGGGRGGGGGSTNGGVGYGNGGGEGSGAGYGGGEERGYGNGGGGGGGGSGGGGGGG 120
           YGGGGGGG GGGGGSTNGG GYGNGGGEGSG+GY                          
Sbjct: 61  YGGGGGGGHGGGGGSTNGG-GYGNGGGEGSGSGY-------------------------- 120

Query: 121 SGVRYGPVGGYGSGEGGGSGGGYGGGGSGYGGGGGGGGGGNGGGSGGYGAGEASGGGYGS 180
                                            GGGGGGGNGGG GGYGAG ASGGGYGS
Sbjct: 121 ---------------------------------GGGGGGGNGGG-GGYGAGAASGGGYGS 180

Query: 181 GGGQGGGSGSGGGGHGGGGGGGWGGGYGSGGNGGGYGSGGGEGGGSGSGAGGHGGGGGGG 240
           GGGQGGGSGSGGGGHGGGGGGGWGGGYGSGGNGGGYGSGGGEGGGSGSGAGGHGGGGGGG
Sbjct: 181 GGGQGGGSGSGGGGHGGGGGGGWGGGYGSGGNGGGYGSGGGEGGGSGSGAGGHGGGGGGG 208

Query: 241 SGGGYGGGGGAQGGGYGGGGGSGGGGGGYAP 272
           SGGGY GGGGAQGGGYGGGGGS GGGGGY+P
Sbjct: 241 SGGGY-GGGGAQGGGYGGGGGS-GGGGGYSP 208

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BLAST of CsaV3_3G001660 vs. ExPASy TrEMBL
Match: A0A0A0L3Y5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G011080 PE=4 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 1.5e-78
Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 0


Query: 1   MENHRVQFLALFALLGLGLASAARTLIAYDGDVHAPVLGHTSVGYGGGEGAGSGYGVSVG 60
           MENHRVQFLALFALLGLGLASAARTLIAYDGDVHAPVLGHTSVGYGGGEGAGSGYGVSVG
Sbjct: 1   MENHRVQFLALFALLGLGLASAARTLIAYDGDVHAPVLGHTSVGYGGGEGAGSGYGVSVG 60

Query: 61  YGGGGGGGRGGGGGSTNGGVGYGNGGGEGSGAGYGGGEERGYGNGGGGGGGGSGGGGGGG 120
           YGGGGGGGRGGGGGSTNGGVGYGNGGGEGSGAGYGGGEERGYGNGGGGGGGGSGGGGGGG
Sbjct: 61  YGGGGGGGRGGGGGSTNGGVGYGNGGGEGSGAGYGGGEERGYGNGGGGGGGGSGGGGGGG 120

Query: 121 SGVRYGPVGGYGSGEGGGSGGGYGGGGSGYGGGGGGGGGGNGGGSGGYGAGEASGGGYGS 180
           SGVRYGPVGGYGSGEGGGSGGGYGGGGSGYGGGGGGGGGGNGGGSGGYGAGEASGGGYGS
Sbjct: 121 SGVRYGPVGGYGSGEGGGSGGGYGGGGSGYGGGGGGGGGGNGGGSGGYGAGEASGGGYGS 180

Query: 181 GGGQGGGSGSGGGGHGGGGGGGWGGGYGSGGNGGGYGSGGGEGGGSGSGAGGHGGGGGGG 240
           GGGQGGGSGSGGGGHGGGGGGGWGGGYGSGGNGGGYGSGGGEGGGSGSGAGGHGGGGGGG
Sbjct: 181 GGGQGGGSGSGGGGHGGGGGGGWGGGYGSGGNGGGYGSGGGEGGGSGSGAGGHGGGGGGG 240

Query: 241 SGGGYGGGGGAQGGGYGGGGGSGGGGGGYAP 272
           SGGGYGGGGGAQGGGYGGGGGSGGGGGGYAP
Sbjct: 241 SGGGYGGGGGAQGGGYGGGGGSGGGGGGYAP 271

[Close]

BLAST of CsaV3_3G001660 vs. ExPASy TrEMBL
Match: A0A6J1E5Z3 (glycine-rich cell wall structural protein 1.8-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111431102 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 1.0e-42
Identity = 224/276 (81.16%), Postives = 231/276 (83.70%), Query Frame = 0


Query: 1   MENHRVQFLALFALLGLGLASAARTLIAYDGDVHAPVLGHTSVGYGGGEGAGSGYGVSVG 60
           MENH +Q+L  FALLG GLASAARTL+AYD +V  PVLG  SVGYGGGEG GSGYGV+ G
Sbjct: 1   MENHAMQYLVFFALLGFGLASAARTLVAYDANVQVPVLGRVSVGYGGGEGGGSGYGVTTG 60

Query: 61  Y-GGGGGGGRGGGGGSTNGGVGYGNGGGEGSGAGYGGGEERGYGNGGGGGGGGSGGGGGG 120
           Y GGGGGGGRGGGGGS  GGVGYGNGGGEGSGAGYGGGE+RGYGNGGGGGGG  GG GGG
Sbjct: 61  YAGGGGGGGRGGGGGSGYGGVGYGNGGGEGSGAGYGGGEDRGYGNGGGGGGGSGGGSGGG 120

Query: 121 GSGVRYGPVGGYGSGEGGGSGGGYGGGGSGYGGGGGGGGGGNGGGSGGYGAGEASGGGYG 180
                YGP GGYGSG G GSGGGYG GG GYGGGGGGG     GG GGYGAG A+GGGYG
Sbjct: 121 -----YGPGGGYGSGGGAGSGGGYGSGGVGYGGGGGGG----SGGGGGYGAGGANGGGYG 180

Query: 181 SGGGQGGGSGSGGGGHGGGGGGGWGGGYGSGG-NGGGYGSGGGEGGGSGSGAGGHGGGGG 240
           SGGGQGGGSGSG GGHGGGGGGG GGGYG GG NGGGYGSGGG GGGSGSGAGGHGGGGG
Sbjct: 181 SGGGQGGGSGSGAGGHGGGGGGGSGGGYGGGGANGGGYGSGGGGGGGSGSGAGGHGGGGG 240

Query: 241 GGSGGGYGGGGGAQGGGYGGGGGS---GGGGGGYAP 272
           GGSGGGY GGGGAQGGGYG GGGS   GG GGGYAP
Sbjct: 241 GGSGGGY-GGGGAQGGGYGAGGGSGQGGGHGGGYAP 266

[Close]

BLAST of CsaV3_3G001660 vs. ExPASy TrEMBL
Match: A0A1S4DY03 (glycine-rich cell wall structural protein 1.8-like OS=Cucumis melo OX=3656 GN=LOC103490777 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 4.2e-41
Identity = 199/271 (73.43%), Postives = 203/271 (74.91%), Query Frame = 0


Query: 1   MENHRVQFLALFALLGLGLASAARTLIAYDGDVHAPVLGHTSVGYGGGEGAGSGYGVSVG 60
           MENHRVQFLALFALLGLGLASAARTLIAYDGDV  PVLGHTSVGYGGGEG GSGYG+S+G
Sbjct: 1   MENHRVQFLALFALLGLGLASAARTLIAYDGDVRVPVLGHTSVGYGGGEGGGSGYGLSLG 60

Query: 61  YGGGGGGGRGGGGGSTNGGVGYGNGGGEGSGAGYGGGEERGYGNGGGGGGGGSGGGGGGG 120
           YGGGGGGG GGGGGSTNGG GYGNGGGEGSG+GY                          
Sbjct: 61  YGGGGGGGHGGGGGSTNGG-GYGNGGGEGSGSGY-------------------------- 120

Query: 121 SGVRYGPVGGYGSGEGGGSGGGYGGGGSGYGGGGGGGGGGNGGGSGGYGAGEASGGGYGS 180
                                            GGGGGGGNGGG GGYGAG ASGGGYGS
Sbjct: 121 ---------------------------------GGGGGGGNGGG-GGYGAGAASGGGYGS 180

Query: 181 GGGQGGGSGSGGGGHGGGGGGGWGGGYGSGGNGGGYGSGGGEGGGSGSGAGGHGGGGGGG 240
           GGGQGGGSGSGGGGHGGGGGGGWGGGYGSGGNGGGYGSGGGEGGGSGSGAGGHGGGGGGG
Sbjct: 181 GGGQGGGSGSGGGGHGGGGGGGWGGGYGSGGNGGGYGSGGGEGGGSGSGAGGHGGGGGGG 208

Query: 241 SGGGYGGGGGAQGGGYGGGGGSGGGGGGYAP 272
           SGGGY GGGGAQGGGYGGGGGS GGGGGY+P
Sbjct: 241 SGGGY-GGGGAQGGGYGGGGGS-GGGGGYSP 208

[Close]

BLAST of CsaV3_3G001660 vs. ExPASy TrEMBL
Match: A0A6J1L823 (glycine-rich cell wall structural protein 1.8-like OS=Cucurbita maxima OX=3661 GN=LOC111500160 PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 4.7e-40
Identity = 221/277 (79.78%), Postives = 230/277 (83.03%), Query Frame = 0


Query: 1   MENHRVQFLALFALLGLGLASAARTLIAYDGDVHAPVLGHTSVGYGGGEGAGSGYGVSVG 60
           MENH +++L  FALLG GLASAARTL+AYD +V  PVLG  S+GYGGGEG GSGYGV+ G
Sbjct: 13  MENHAIEYLVFFALLGFGLASAARTLVAYDANVQVPVLGRVSIGYGGGEGGGSGYGVTAG 72

Query: 61  YGGGGGGGRGGGGGSTNGGVGYGNGGGEGSGAGYGGGEERGYGNGGGGGGGGSGGGGGGG 120
           Y GGGGGGRGGGGGS  GGVGYGNGGGEGSGAGYGGGE+RGYGNGGGGGGG  GG GGG 
Sbjct: 73  YAGGGGGGRGGGGGSAYGGVGYGNGGGEGSGAGYGGGEDRGYGNGGGGGGGSGGGSGGG- 132

Query: 121 SGVRYGPVGGYGSGEGGGSGGGYGGGGSGYGGGGGGGGGGNGG-GSGG-YGAGEASGGGY 180
               YGP GGYGSG G GSGGGYG GG GYGGGGGGG GG GG G+GG  G G  SGGGY
Sbjct: 133 ----YGPGGGYGSGGGAGSGGGYGSGGVGYGGGGGGGSGGGGGYGAGGANGGGYGSGGGY 192

Query: 181 GSGGGQGGGSGSGGGGHGGGGGGGWGGGYGSGG-NGGGYGSGGGEGGGSGSGAGGHGGGG 240
           GSGGGQGG SGSG GGHGGGGGGG GGGYG GG NGGGYGSGGGEGGGSGSGAGGHGGG 
Sbjct: 193 GSGGGQGGSSGSGAGGHGGGGGGGSGGGYGGGGANGGGYGSGGGEGGGSGSGAGGHGGGV 252

Query: 241 GGGSGGGYGGGGGAQGGGYGGGGGS---GGGGGGYAP 272
           GGGSGGGY GGGGAQGGGYG GGGS   GG GGGYAP
Sbjct: 253 GGGSGGGY-GGGGAQGGGYGAGGGSGQGGGHGGGYAP 283

[Close]

BLAST of CsaV3_3G001660 vs. ExPASy TrEMBL
Match: A0A6J1E9J4 (glycine-rich cell wall structural protein 1.8-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111431102 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 3.0e-31
Identity = 184/240 (76.67%), Postives = 192/240 (80.00%), Query Frame = 0


Query: 1   MENHRVQFLALFALLGLGLASAARTLIAYDGDVHAPVLGHTSVGYGGGEGAGSGYGVSVG 60
           MENH +Q+L  FALLG GLASAARTL+AYD +V  PVLG  SVGYGGGEG GSGYGV+ G
Sbjct: 1   MENHAMQYLVFFALLGFGLASAARTLVAYDANVQVPVLGRVSVGYGGGEGGGSGYGVTTG 60

Query: 61  Y-GGGGGGGRGGGGGSTNGGVGYGNGGGEGSGAGYGGGEERGYGNGGGGGGGGSGGGGGG 120
           Y GGGGGGGRGGGGGS  GGVGYGNGGGEGSGAGYGGGE+RGYGNGGGGGGG  GG GGG
Sbjct: 61  YAGGGGGGGRGGGGGSGYGGVGYGNGGGEGSGAGYGGGEDRGYGNGGGGGGGSGGGSGGG 120

Query: 121 GSGVRYGPVGGYGSGEGGGSGGGYGGGGSGYGGGGGGGGGGNGG-GSGG-YGAGEASGGG 180
                YGP GGYGSG G GSGGGYG GG GYGGGGGGG GG GG G+GG  G G  SGGG
Sbjct: 121 -----YGPGGGYGSGGGAGSGGGYGSGGVGYGGGGGGGSGGGGGYGAGGANGGGYGSGGG 180

Query: 181 YGSGGGQGGGSGSGGGGHGGGGGGGWGGGYGSGG-NGGGYGSGGGEGGGSGSGAGGHGGG 237
           YGSGGG GGGSGSG GGHGGGGGGG GGGYG GG  GGGYG+GGG G G     GGHGGG
Sbjct: 181 YGSGGGGGGGSGSGAGGHGGGGGGGSGGGYGGGGAQGGGYGAGGGSGQG-----GGHGGG 230

The following BLAST results are available for this feature:

BLAST of CsaV3_3G001660 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011652713.1	3.1e-78	100.00	glycine-rich cell wall structural protein 2 [Cucumis sativus] >KGN55754.1 hypoth...	[more]
XP_038903688.1	7.2e-51	86.55	glycine-rich cell wall structural protein 1.8-like [Benincasa hispida]	[more]
XP_022923391.1	2.1e-42	81.16	glycine-rich cell wall structural protein 1.8-like isoform X1 [Cucurbita moschat...	[more]
KAG6577707.1	1.4e-41	81.03	hypothetical protein SDJN03_25281, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_016900590.1	8.8e-41	73.43	PREDICTED: glycine-rich cell wall structural protein 1.8-like [Cucumis melo]	[more]

BLAST of CsaV3_3G001660 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_3G001660 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L3Y5	1.5e-78	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G011080 PE=4 SV=1	[more]
A0A6J1E5Z3	1.0e-42	81.16	glycine-rich cell wall structural protein 1.8-like isoform X1 OS=Cucurbita mosch...	[more]
A0A1S4DY03	4.2e-41	73.43	glycine-rich cell wall structural protein 1.8-like OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A6J1L823	4.7e-40	79.78	glycine-rich cell wall structural protein 1.8-like OS=Cucurbita maxima OX=3661 G...	[more]
A0A6J1E9J4	3.0e-31	76.67	glycine-rich cell wall structural protein 1.8-like isoform X2 OS=Cucurbita mosch...	[more]

BLAST of CsaV3_3G001660 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR01228	EGGSHELL	coord: 155..173 score: 48.03 coord: 103..118 score: 60.94 coord: 131..141 score: 45.45 coord: 6..22 score: 36.03
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 223..244

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G001660.1	CsaV3_3G001660.1	mRNA