CsaV3_3G001630 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G001630
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Descriptionglycine-rich cell wall structural protein 1.8-like
Locationchr3: 1253406 .. 1254381 (+)
RNA-Seq ExpressionCsaV3_3G001630
SyntenyCsaV3_3G001630
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTATCTCTAGAGTGTTGTGCATTGGCTTTCTTCTTTTTGTAGGTTTAGGGTTAGCTTCGGCTACCCGAACTCTTCTTGATTATGATCCACGTGCACGTCGTTATGATTACGATCATCCTACTCCAAGAGTAGGGTACGATCCAAGTCATCGTGATCAATCATATGATAATGCATACAGTGGAAGTTCTAGTAAAGGATATGGAATTGGAGACTCTACTCTTGGAGGTTCTGGACGATATGGAGGTGGCAAAGGACATGATTCCGGATATGGAGGTCGAAATGATGATCGCAGTACTGGATATGGAGGTCGAAATGATGACCGCAGTGATGGATATGGAGGTCGAAATGATGACCGCGGTGCTGGATACGGAGGTCGAAATGATGATCGCGGTGTTGGATATGGAGGTCGAAATGATGATCGCGGTGTTGGATATGGAGGTCGAAATGATGATCGTGGAGTTGGATATGGTAATGGTGGTAGATATGGAAGTGTAGGAGGACATGGTGATGGTTATGGTAACAATGGTGGTGGAAGCTATGGAGATCGTTATGGCCCTTCTCTTGGAGGTTCAGGAAAAGGAAGTAACAATGGCTATAACGATCATTCTCGTGGAAATGGAGGACGTGACAGTGGCTATGGAGATTCACATGGACATGAAGGACGTGAGAGTGGAAATGGAAGCGGTGGAGGAGTTAGTGGTGGCTATGGTAATGGAGGAGTACATGGAGGAGAGTATGATAATAGCAAAGGAAGTGGAGAAGAAGGGGGTAATGATGGTGGATATGCTGTCAAAAATTCTATCTCAAAGGAGAATTGAGAATTCCTCTTTTTCAAGTAATGAACCCAATATCATATTATGTTAACGAGAAATAAAGAAATTGGGTGAGAGAATGTTGTGTTTTAAATTTATGTTGAATTTTCTTTGAATAATTCGAATCAATAGGTACAATGATAATCAAATTTGGATTATG

mRNA sequence

ATGGCTATCTCTAGAGTGTTGTGCATTGGCTTTCTTCTTTTTGTAGGTTTAGGGTTAGCTTCGGCTACCCGAACTCTTCTTGATTATGATCCACGTGCACGTCGTTATGATTACGATCATCCTACTCCAAGAGTAGGGTACGATCCAAGTCATCGTGATCAATCATATGATAATGCATACAGTGGAAGTTCTAGTAAAGGATATGGAATTGGAGACTCTACTCTTGGAGGTTCTGGACGATATGGAGGTGGCAAAGGACATGATTCCGGATATGGAGGTCGAAATGATGATCGCAGTACTGGATATGGAGGTCGAAATGATGACCGCAGTGATGGATATGGAGGTCGAAATGATGACCGCGGTGCTGGATACGGAGGTCGAAATGATGATCGCGGTGTTGGATATGGAGGTCGAAATGATGATCGCGGTGTTGGATATGGAGGTCGAAATGATGATCGTGGAGTTGGATATGGTAATGGTGGTAGATATGGAAGTGTAGGAGGACATGGTGATGGTTATGGTAACAATGGTGGTGGAAGCTATGGAGATCGTTATGGCCCTTCTCTTGGAGGTTCAGGAAAAGGAAGTAACAATGGCTATAACGATCATTCTCGTGGAAATGGAGGACGTGACAGTGGCTATGGAGATTCACATGGACATGAAGGACGTGAGAGTGGAAATGGAAGCGGTGGAGGAGTTAGTGGTGGCTATGGTAATGGAGGAGTACATGGAGGAGAGTATGATAATAGCAAAGGAAGTGGAGAAGAAGGGGGTAATGATGGTGGATATGCTGTCAAAAATTCTATCTCAAAGGAGAATTGA

Coding sequence (CDS)

ATGGCTATCTCTAGAGTGTTGTGCATTGGCTTTCTTCTTTTTGTAGGTTTAGGGTTAGCTTCGGCTACCCGAACTCTTCTTGATTATGATCCACGTGCACGTCGTTATGATTACGATCATCCTACTCCAAGAGTAGGGTACGATCCAAGTCATCGTGATCAATCATATGATAATGCATACAGTGGAAGTTCTAGTAAAGGATATGGAATTGGAGACTCTACTCTTGGAGGTTCTGGACGATATGGAGGTGGCAAAGGACATGATTCCGGATATGGAGGTCGAAATGATGATCGCAGTACTGGATATGGAGGTCGAAATGATGACCGCAGTGATGGATATGGAGGTCGAAATGATGACCGCGGTGCTGGATACGGAGGTCGAAATGATGATCGCGGTGTTGGATATGGAGGTCGAAATGATGATCGCGGTGTTGGATATGGAGGTCGAAATGATGATCGTGGAGTTGGATATGGTAATGGTGGTAGATATGGAAGTGTAGGAGGACATGGTGATGGTTATGGTAACAATGGTGGTGGAAGCTATGGAGATCGTTATGGCCCTTCTCTTGGAGGTTCAGGAAAAGGAAGTAACAATGGCTATAACGATCATTCTCGTGGAAATGGAGGACGTGACAGTGGCTATGGAGATTCACATGGACATGAAGGACGTGAGAGTGGAAATGGAAGCGGTGGAGGAGTTAGTGGTGGCTATGGTAATGGAGGAGTACATGGAGGAGAGTATGATAATAGCAAAGGAAGTGGAGAAGAAGGGGGTAATGATGGTGGATATGCTGTCAAAAATTCTATCTCAAAGGAGAATTGA

Protein sequence

MAISRVLCIGFLLFVGLGLASATRTLLDYDPRARRYDYDHPTPRVGYDPSHRDQSYDNAYSGSSSKGYGIGDSTLGGSGRYGGGKGHDSGYGGRNDDRSTGYGGRNDDRSDGYGGRNDDRGAGYGGRNDDRGVGYGGRNDDRGVGYGGRNDDRGVGYGNGGRYGSVGGHGDGYGNNGGGSYGDRYGPSLGGSGKGSNNGYNDHSRGNGGRDSGYGDSHGHEGRESGNGSGGGVSGGYGNGGVHGGEYDNSKGSGEEGGNDGGYAVKNSISKEN*
Homology
BLAST of CsaV3_3G001630 vs. NCBI nr
Match: KAE8650022.1 (hypothetical protein Csa_011604 [Cucumis sativus])

HSP 1 Score: 498.4 bits (1282), Expect = 3.9e-137
Identity = 273/273 (100.00%), Postives = 273/273 (100.00%), Query Frame = 0

Query: 1   MAISRVLCIGFLLFVGLGLASATRTLLDYDPRARRYDYDHPTPRVGYDPSHRDQSYDNAY 60
           MAISRVLCIGFLLFVGLGLASATRTLLDYDPRARRYDYDHPTPRVGYDPSHRDQSYDNAY
Sbjct: 1   MAISRVLCIGFLLFVGLGLASATRTLLDYDPRARRYDYDHPTPRVGYDPSHRDQSYDNAY 60

Query: 61  SGSSSKGYGIGDSTLGGSGRYGGGKGHDSGYGGRNDDRSTGYGGRNDDRSDGYGGRNDDR 120
           SGSSSKGYGIGDSTLGGSGRYGGGKGHDSGYGGRNDDRSTGYGGRNDDRSDGYGGRNDDR
Sbjct: 61  SGSSSKGYGIGDSTLGGSGRYGGGKGHDSGYGGRNDDRSTGYGGRNDDRSDGYGGRNDDR 120

Query: 121 GAGYGGRNDDRGVGYGGRNDDRGVGYGGRNDDRGVGYGNGGRYGSVGGHGDGYGNNGGGS 180
           GAGYGGRNDDRGVGYGGRNDDRGVGYGGRNDDRGVGYGNGGRYGSVGGHGDGYGNNGGGS
Sbjct: 121 GAGYGGRNDDRGVGYGGRNDDRGVGYGGRNDDRGVGYGNGGRYGSVGGHGDGYGNNGGGS 180

Query: 181 YGDRYGPSLGGSGKGSNNGYNDHSRGNGGRDSGYGDSHGHEGRESGNGSGGGVSGGYGNG 240
           YGDRYGPSLGGSGKGSNNGYNDHSRGNGGRDSGYGDSHGHEGRESGNGSGGGVSGGYGNG
Sbjct: 181 YGDRYGPSLGGSGKGSNNGYNDHSRGNGGRDSGYGDSHGHEGRESGNGSGGGVSGGYGNG 240

Query: 241 GVHGGEYDNSKGSGEEGGNDGGYAVKNSISKEN 274
           GVHGGEYDNSKGSGEEGGNDGGYAVKNSISKEN
Sbjct: 241 GVHGGEYDNSKGSGEEGGNDGGYAVKNSISKEN 273

BLAST of CsaV3_3G001630 vs. NCBI nr
Match: XP_031739354.1 (glycine-rich cell wall structural protein 1.8 [Cucumis sativus])

HSP 1 Score: 441.8 bits (1135), Expect = 4.3e-120
Identity = 251/284 (88.38%), Postives = 253/284 (89.08%), Query Frame = 0

Query: 1   MAISRVLCIGFLLFVGLGLASATRTLLDYDPRARRYDYDHPTPRVGYDPSHRDQSYDNAY 60
           MAISRVLCIGFLLFVGLGLASA RTLLDYDPRARRYDYD PTPRVGYDPSHRDQSYDN Y
Sbjct: 1   MAISRVLCIGFLLFVGLGLASAARTLLDYDPRARRYDYDRPTPRVGYDPSHRDQSYDNVY 60

Query: 61  SGSSSKGYGIGDSTLGGSGRYGGGKGHDSGYGGRNDDRSTGYGGRNDDRSDGYGGRNDDR 120
            GSSS+GYG GDS LGGSGRY GG G D G+GGRNDDR  GYGGRNDDR   YGGRNDD 
Sbjct: 61  GGSSSRGYGAGDSALGGSGRYEGGGGRDYGHGGRNDDRGVGYGGRNDDRGAEYGGRNDDH 120

Query: 121 GAGYGGRNDDRGVGYGGRNDDRG-----------VGYGGRNDDRGVGYGNGGRYGSVGGH 180
           GAGYG RNDDRGVGYG RNDDRG           VGYGGRNDDRGVGYGNGG YG VGGH
Sbjct: 121 GAGYGSRNDDRGVGYGSRNDDRGVGYGSRNDDRSVGYGGRNDDRGVGYGNGGGYGGVGGH 180

Query: 181 GDGYGNNGGGSYGDRYGPSLGGSGKGSNNGYNDHSRGNGGRDSGYGDSHGHEGRESGNGS 240
           GDGYGNNGGGSYGDRYGPSLGGSGKGSNNGYNDHSRGNGGRDSGYGDSHGHEGRESGNGS
Sbjct: 181 GDGYGNNGGGSYGDRYGPSLGGSGKGSNNGYNDHSRGNGGRDSGYGDSHGHEGRESGNGS 240

Query: 241 GGGVSGGYGNGGVHGGEYDNSKGSGEEGGNDGGYAVKNSISKEN 274
           GGGVSGGYGNGGVHGGEYDNSKGSGEEGGNDGGYAVKNSISKEN
Sbjct: 241 GGGVSGGYGNGGVHGGEYDNSKGSGEEGGNDGGYAVKNSISKEN 284

BLAST of CsaV3_3G001630 vs. NCBI nr
Match: XP_031738632.1 (glycine-rich cell wall structural protein 1.8-like [Cucumis sativus])

HSP 1 Score: 417.9 bits (1073), Expect = 6.6e-113
Identity = 242/300 (80.67%), Postives = 251/300 (83.67%), Query Frame = 0

Query: 1   MAISRVLCIGFLLFVGLGLASATRTLLDYDPRARRYDYDHPTPRVGYDPSHRDQSYDNAY 60
           MAI +VLCIGFLLFVGLGLASA RTLLDYDPR RRYDYDHPTPRVGYDPSHRDQSYD+AY
Sbjct: 1   MAIPKVLCIGFLLFVGLGLASAARTLLDYDPRTRRYDYDHPTPRVGYDPSHRDQSYDSAY 60

Query: 61  SGSSSKGYGIGDSTLGGSGRYGGGKGHDSGYGG----------------------RNDDR 120
           SGSSSKGYG+GDS LGGSGRY GG G DSGYGG                      RNDDR
Sbjct: 61  SGSSSKGYGVGDSALGGSGRYEGGGGRDSGYGGRNDDHGVGYEGRNDGRGAGYGSRNDDR 120

Query: 121 STGYGGRNDDRSDGYGGRNDDRGAGYGGRNDDRGVGYGGRNDDRGVGYGGRNDDRGVGYG 180
           S GYGGRNDDR  GYGGRNDDRGAGYGGRNDD G GYG RNDD G GYGGRNDDRGVGYG
Sbjct: 121 SAGYGGRNDDRGAGYGGRNDDRGAGYGGRNDDHGAGYGSRNDDHGAGYGGRNDDRGVGYG 180

Query: 181 NGGRYGSVGGHGDGYGNNGGGSYGDRYGPSLGGS-----GKGSNNGYNDHSRGNGGRDSG 240
           NGG YGSVGGHGDGYGNNGGGSYGDRYGPSLGGS     GKGS NGY+DHSRGNG RD+ 
Sbjct: 181 NGGGYGSVGGHGDGYGNNGGGSYGDRYGPSLGGSGYGSGGKGSGNGYDDHSRGNGARDNN 240

Query: 241 YGDSHGHEGRESGNGSGGGVSGGYGNGGVHGGEYDNSKGSGEEGGNDGGYAVKNSISKEN 274
           YGDSHGHEGR+SG GSGGGVSGGYGNGGVHGGE+DNSKGSGEEGG+DGGYA KNSIS +N
Sbjct: 241 YGDSHGHEGRDSGYGSGGGVSGGYGNGGVHGGEHDNSKGSGEEGGSDGGYAFKNSISNKN 300

BLAST of CsaV3_3G001630 vs. NCBI nr
Match: XP_008449164.1 (PREDICTED: glycine-rich cell wall structural protein 1.0-like [Cucumis melo] >KAA0053037.1 glycine-rich cell wall structural protein 1.0-like [Cucumis melo var. makuwa] >TYK11492.1 glycine-rich cell wall structural protein 1.0-like [Cucumis melo var. makuwa])

HSP 1 Score: 409.5 bits (1051), Expect = 2.4e-110
Identity = 238/293 (81.23%), Postives = 244/293 (83.28%), Query Frame = 0

Query: 1   MAISRVLCIGFLLFVGLGLASATRTLLDYDPRARRYDYDHPTPRVGYDPSHRDQSYDNAY 60
           MAISR LCI FLLFV LGLASA RTLLDYDPR RRYDYDHPTPRVGYDPSHRDQSYDNAY
Sbjct: 1   MAISRALCISFLLFVCLGLASAARTLLDYDPRTRRYDYDHPTPRVGYDPSHRDQSYDNAY 60

Query: 61  SGSSSKGYGIGDSTLGGSGRYGGGKGHDSGYGGRNDDR---------------STGYGGR 120
            GSS++GYG+GDS LGGSGRY GG GHD GYGGRNDDR                 GYGGR
Sbjct: 61  GGSSNRGYGVGDSALGGSGRYEGGGGHDYGYGGRNDDRGVGYGGRNDDHGAGYGAGYGGR 120

Query: 121 NDDRSDGYGGRNDDRGAGYGGRNDDRGVGYGGRNDDRGVGYGGRNDDRGVGYGNGGRYGS 180
           NDDR  GYGGRNDDRGAGYG RNDD G GYGGRNDDRG GYGGRNDDRGVGYGNGG YG 
Sbjct: 121 NDDRGAGYGGRNDDRGAGYGRRNDDHGAGYGGRNDDRGAGYGGRNDDRGVGYGNGGGYGG 180

Query: 181 VGGHGDGYGNNGGGSYGDRYGPSLGGS-----GKGSNNGYNDHSRGNGGRDSGYGDSHGH 240
           VGGHGDGYGNN GG YGDRY PSLGGS     GKGS NGY+DHSRG GG D+GYGDSHGH
Sbjct: 181 VGGHGDGYGNNVGGGYGDRYSPSLGGSGYGNGGKGSGNGYDDHSRGYGGHDNGYGDSHGH 240

Query: 241 EGRESGNGSGGGVSGGYGNGGVHGGEYDNSKGSGEEGGNDGGYAVKNSISKEN 274
            GR+SG GSGGGVSGGYGNGGVHGGEYDNSKGSGE GGNDGGYAVKNSISKEN
Sbjct: 241 GGRDSGYGSGGGVSGGYGNGGVHGGEYDNSKGSGEGGGNDGGYAVKNSISKEN 293

BLAST of CsaV3_3G001630 vs. NCBI nr
Match: KAE8650023.1 (hypothetical protein Csa_011563 [Cucumis sativus])

HSP 1 Score: 384.8 bits (987), Expect = 6.2e-103
Identity = 223/278 (80.22%), Postives = 232/278 (83.45%), Query Frame = 0

Query: 1   MAISRVLCIGFLLFVGLGLASATRTLLDYDPRARRYDYDHPTPRVGYDPSHRDQSYDNAY 60
           MAI +VLCIGFLLFVGLGLASA RTLLDYDPR RRYDYDHPTPRVGYDPSHRDQSYD+AY
Sbjct: 1   MAIPKVLCIGFLLFVGLGLASAARTLLDYDPRTRRYDYDHPTPRVGYDPSHRDQSYDSAY 60

Query: 61  SGSSSKGYGIGDSTLGGSGRYGGGKGHDSGYGGRNDDRSTGYGGRNDDRSDGYGGRNDDR 120
           SGSSSKGYG+GDS LGGSGRY GG G DS                      GYGGRNDDR
Sbjct: 61  SGSSSKGYGVGDSALGGSGRYEGGGGRDS----------------------GYGGRNDDR 120

Query: 121 GAGYGGRNDDRGVGYGGRNDDRGVGYGGRNDDRGVGYGNGGRYGSVGGHGDGYGNNGGGS 180
           GAGYGGRNDD G GYG RNDD G GYGGRNDDRGVGYGNGG YGSVGGHGDGYGNNGGGS
Sbjct: 121 GAGYGGRNDDHGAGYGSRNDDHGAGYGGRNDDRGVGYGNGGGYGSVGGHGDGYGNNGGGS 180

Query: 181 YGDRYGPSLGGS-----GKGSNNGYNDHSRGNGGRDSGYGDSHGHEGRESGNGSGGGVSG 240
           YGDRYGPSLGGS     GKGS NGY+DHSRGNG RD+ YGDSHGHEGR+SG GSGGGVSG
Sbjct: 181 YGDRYGPSLGGSGYGSGGKGSGNGYDDHSRGNGARDNNYGDSHGHEGRDSGYGSGGGVSG 240

Query: 241 GYGNGGVHGGEYDNSKGSGEEGGNDGGYAVKNSISKEN 274
           GYGNGGVHGGE+DNSKGSGEEGG+DGGYA KNSIS +N
Sbjct: 241 GYGNGGVHGGEHDNSKGSGEEGGSDGGYAFKNSISNKN 256

BLAST of CsaV3_3G001630 vs. ExPASy Swiss-Prot
Match: P10496 (Glycine-rich cell wall structural protein 1.8 OS=Phaseolus vulgaris OX=3885 PE=2 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 1.3e-05
Identity = 100/274 (36.50%), Postives = 116/274 (42.34%), Query Frame = 0

Query: 3   ISRVLCIGFLLFVGLGLASATRTLLDYDPRARRYDYDHPTPRVGYDPSHRDQSYDNAYSG 62
           I R+  + FL+ + LG+ SA R LL  D               GY   H           
Sbjct: 4   IHRLPSLVFLVLLALGVCSARRALLTLD--------------AGYGLGH----------- 63

Query: 63  SSSKGYGIGDSTLGGSGRYGGGKGHDSGYGGRNDDRSTGYGGRNDDRSDGYGGRNDDRGA 122
            +  GYG    + GG G  GGG G   GY G +     GYGG +     G  G   D+GA
Sbjct: 64  GTGGGYGGAAGSYGGGG--GGGSGGGGGYAGEHG--VVGYGGGSGGGQGGGVGYGGDQGA 123

Query: 123 GY---GGRNDDRGVGYGGRNDDRGVGYG---------GRNDDRGVGYGNGGRYGSVGGHG 182
           GY   GG     GV YGG  +  G G G         G   + G+GYG GG  G+ GG G
Sbjct: 124 GYGGGGGSGGGGGVAYGGGGERGGYGGGQGGGAGGGYGAGGEHGIGYGGGGGSGAGGGGG 183

Query: 183 DGYGNNGGGSYGDRYGPSLGGSGKGSN-NGYNDHSRGNGGRDSGYGDSHGHEGRESGNGS 242
              G   GG YG   G   GG G G +  GY       GG   GYG   G  G   G G 
Sbjct: 184 YNAGGAQGGGYGTGGGAGGGGGGGGDHGGGYGGGQGAGGGAGGGYGGG-GEHGGGGGGGQ 243

Query: 243 GGGVSGGYGNGGVHGGEYDNSKGSGEEGGNDGGY 264
           GGG  GGYG GG HGG      G G+ GG  GGY
Sbjct: 244 GGGAGGGYGAGGEHGG----GAGGGQGGGAGGGY 243

BLAST of CsaV3_3G001630 vs. ExPASy Swiss-Prot
Match: P10495 (Glycine-rich cell wall structural protein 1.0 OS=Phaseolus vulgaris OX=3885 PE=2 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 4.0e-04
Identity = 107/274 (39.05%), Postives = 121/274 (44.16%), Query Frame = 0

Query: 1   MAISRVLCIGFL-LFVGLGLASATRTLLDYDPRARRYDYDHPTPRVGYDPSHRDQSYDNA 60
           MA S+VL    L +FV  G+ SA RTLL  + R       H    VG             
Sbjct: 1   MATSKVLLSNVLFVFVCFGICSAARTLLTLEDRVNL----HVGTVVG------------G 60

Query: 61  YSGSSSKGYGIGDST--LGGSG---RYGGGKGHDSGY----GGRNDDRSTGYGGRNDDRS 120
           Y G    G G G +   LGG G     GGG+G  +GY    GG       G GG      
Sbjct: 61  YGGGGGSGGGGGGAAVELGGGGYGEGAGGGEGAGAGYGAAGGGHGGGGGNGGGGGGGADG 120

Query: 121 DGY-GGRNDDRGAGYGGRNDDRGVGYGGRNDDRGVGYGGRNDDRGVGYGNGGRYGSVGGH 180
            GY GG     G GYGG   + G GYGG     G G GG     G GYG G   G+ GG+
Sbjct: 121 GGYGGGAGKGGGEGYGGGGANGG-GYGGGGGSGGGGGGGAG-GAGSGYGGGEGSGAGGGY 180

Query: 181 GDGYGNNGGGSYGDRYGPSLGGSGKGSNNGYNDHSRGNGGRDSGYGDSHGHEGRESGNGS 240
           G   G  GGG+ G   G S G  G G+  G     +G GG   GYG   G      G GS
Sbjct: 181 GGANGGGGGGNGGGGGGGSGGAHGGGAAGGGEGAGQGAGG---GYG---GGAAGGGGRGS 240

Query: 241 GGGVSGGYGNGGVHGGEYDNSKGSGEEGGNDGGY 264
           GGG  GGYG GG  G  Y    GSGE GG+ GGY
Sbjct: 241 GGGGGGGYGGGGARGSGYGGGGGSGEGGGHGGGY 250

BLAST of CsaV3_3G001630 vs. ExPASy TrEMBL
Match: A0A5A7UEU3 (Glycine-rich cell wall structural protein 1.0-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G001560 PE=4 SV=1)

HSP 1 Score: 409.5 bits (1051), Expect = 1.1e-110
Identity = 238/293 (81.23%), Postives = 244/293 (83.28%), Query Frame = 0

Query: 1   MAISRVLCIGFLLFVGLGLASATRTLLDYDPRARRYDYDHPTPRVGYDPSHRDQSYDNAY 60
           MAISR LCI FLLFV LGLASA RTLLDYDPR RRYDYDHPTPRVGYDPSHRDQSYDNAY
Sbjct: 1   MAISRALCISFLLFVCLGLASAARTLLDYDPRTRRYDYDHPTPRVGYDPSHRDQSYDNAY 60

Query: 61  SGSSSKGYGIGDSTLGGSGRYGGGKGHDSGYGGRNDDR---------------STGYGGR 120
            GSS++GYG+GDS LGGSGRY GG GHD GYGGRNDDR                 GYGGR
Sbjct: 61  GGSSNRGYGVGDSALGGSGRYEGGGGHDYGYGGRNDDRGVGYGGRNDDHGAGYGAGYGGR 120

Query: 121 NDDRSDGYGGRNDDRGAGYGGRNDDRGVGYGGRNDDRGVGYGGRNDDRGVGYGNGGRYGS 180
           NDDR  GYGGRNDDRGAGYG RNDD G GYGGRNDDRG GYGGRNDDRGVGYGNGG YG 
Sbjct: 121 NDDRGAGYGGRNDDRGAGYGRRNDDHGAGYGGRNDDRGAGYGGRNDDRGVGYGNGGGYGG 180

Query: 181 VGGHGDGYGNNGGGSYGDRYGPSLGGS-----GKGSNNGYNDHSRGNGGRDSGYGDSHGH 240
           VGGHGDGYGNN GG YGDRY PSLGGS     GKGS NGY+DHSRG GG D+GYGDSHGH
Sbjct: 181 VGGHGDGYGNNVGGGYGDRYSPSLGGSGYGNGGKGSGNGYDDHSRGYGGHDNGYGDSHGH 240

Query: 241 EGRESGNGSGGGVSGGYGNGGVHGGEYDNSKGSGEEGGNDGGYAVKNSISKEN 274
            GR+SG GSGGGVSGGYGNGGVHGGEYDNSKGSGE GGNDGGYAVKNSISKEN
Sbjct: 241 GGRDSGYGSGGGVSGGYGNGGVHGGEYDNSKGSGEGGGNDGGYAVKNSISKEN 293

BLAST of CsaV3_3G001630 vs. ExPASy TrEMBL
Match: A0A1S3BM26 (glycine-rich cell wall structural protein 1.0-like OS=Cucumis melo OX=3656 GN=LOC103491114 PE=4 SV=1)

HSP 1 Score: 409.5 bits (1051), Expect = 1.1e-110
Identity = 238/293 (81.23%), Postives = 244/293 (83.28%), Query Frame = 0

Query: 1   MAISRVLCIGFLLFVGLGLASATRTLLDYDPRARRYDYDHPTPRVGYDPSHRDQSYDNAY 60
           MAISR LCI FLLFV LGLASA RTLLDYDPR RRYDYDHPTPRVGYDPSHRDQSYDNAY
Sbjct: 1   MAISRALCISFLLFVCLGLASAARTLLDYDPRTRRYDYDHPTPRVGYDPSHRDQSYDNAY 60

Query: 61  SGSSSKGYGIGDSTLGGSGRYGGGKGHDSGYGGRNDDR---------------STGYGGR 120
            GSS++GYG+GDS LGGSGRY GG GHD GYGGRNDDR                 GYGGR
Sbjct: 61  GGSSNRGYGVGDSALGGSGRYEGGGGHDYGYGGRNDDRGVGYGGRNDDHGAGYGAGYGGR 120

Query: 121 NDDRSDGYGGRNDDRGAGYGGRNDDRGVGYGGRNDDRGVGYGGRNDDRGVGYGNGGRYGS 180
           NDDR  GYGGRNDDRGAGYG RNDD G GYGGRNDDRG GYGGRNDDRGVGYGNGG YG 
Sbjct: 121 NDDRGAGYGGRNDDRGAGYGRRNDDHGAGYGGRNDDRGAGYGGRNDDRGVGYGNGGGYGG 180

Query: 181 VGGHGDGYGNNGGGSYGDRYGPSLGGS-----GKGSNNGYNDHSRGNGGRDSGYGDSHGH 240
           VGGHGDGYGNN GG YGDRY PSLGGS     GKGS NGY+DHSRG GG D+GYGDSHGH
Sbjct: 181 VGGHGDGYGNNVGGGYGDRYSPSLGGSGYGNGGKGSGNGYDDHSRGYGGHDNGYGDSHGH 240

Query: 241 EGRESGNGSGGGVSGGYGNGGVHGGEYDNSKGSGEEGGNDGGYAVKNSISKEN 274
            GR+SG GSGGGVSGGYGNGGVHGGEYDNSKGSGE GGNDGGYAVKNSISKEN
Sbjct: 241 GGRDSGYGSGGGVSGGYGNGGVHGGEYDNSKGSGEGGGNDGGYAVKNSISKEN 293

BLAST of CsaV3_3G001630 vs. ExPASy TrEMBL
Match: A0A5A7UHU2 (Glycine-rich cell wall structural protein 1.8-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G001580 PE=4 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 1.3e-74
Identity = 183/279 (65.59%), Postives = 194/279 (69.53%), Query Frame = 0

Query: 1   MAISRVLCIGFLLFVGLGLASATRTLLDYDPRARRYDYDHPTPRVGYDPSHRDQSYDNAY 60
           MAI R LC+ FLLFVGLGLASATRTLLDYDPR R Y YD P+PRVGYDP HRD+SYDNAY
Sbjct: 1   MAILRALCLAFLLFVGLGLASATRTLLDYDPRTRHYGYDRPSPRVGYDPGHRDESYDNAY 60

Query: 61  SGSSSKGYGIGDSTLGGSGRYGGGKGHDSGYGGRNDDRSTGYGGRNDDRSDGYGGRNDDR 120
            GSSS+G+GIGDS LGGSG  GGG+                                   
Sbjct: 61  GGSSSRGHGIGDSALGGSGYEGGGR----------------------------------- 120

Query: 121 GAGYGGRNDDRGVGYGGRNDDRGVGYGGRNDDRGVGYGNGGRYGSVGGHGDGYGNNGGGS 180
                                R  GYG RND+RGVGYGNGG YG VGGHGDGYGNNGGG 
Sbjct: 121 ---------------------RDYGYGDRNDNRGVGYGNGGGYGGVGGHGDGYGNNGGGG 180

Query: 181 YGDRYGPSLGGS-----GKGSNNGYND-HSRGNGGRDSGYGDSHGHEGRESGNGSGGGVS 240
           YGDRYGPSLGGS     GKGS+NGY+D HS G GGRD+GYGDSHGHEGR+SG GSGGGVS
Sbjct: 181 YGDRYGPSLGGSGYGSGGKGSDNGYDDRHSHGYGGRDNGYGDSHGHEGRDSGYGSGGGVS 223

Query: 241 GGYGNGGVHGGEYDNSKGSGEEGGNDGGYAVKNSISKEN 274
           GGYGNGGVHGGEYDNSKGSGEEGG DGGYAVKNSISK N
Sbjct: 241 GGYGNGGVHGGEYDNSKGSGEEGGYDGGYAVKNSISKGN 223

BLAST of CsaV3_3G001630 vs. ExPASy TrEMBL
Match: A0A1S3BMC4 (glycine-rich cell wall structural protein 1.8-like OS=Cucumis melo OX=3656 GN=LOC103491115 PE=4 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 1.3e-74
Identity = 183/279 (65.59%), Postives = 194/279 (69.53%), Query Frame = 0

Query: 1   MAISRVLCIGFLLFVGLGLASATRTLLDYDPRARRYDYDHPTPRVGYDPSHRDQSYDNAY 60
           MAI R LC+ FLLFVGLGLASATRTLLDYDPR R Y YD P+PRVGYDP HRD+SYDNAY
Sbjct: 1   MAILRALCLAFLLFVGLGLASATRTLLDYDPRTRHYGYDRPSPRVGYDPGHRDESYDNAY 60

Query: 61  SGSSSKGYGIGDSTLGGSGRYGGGKGHDSGYGGRNDDRSTGYGGRNDDRSDGYGGRNDDR 120
            GSSS+G+GIGDS LGGSG  GGG+                                   
Sbjct: 61  GGSSSRGHGIGDSALGGSGYEGGGR----------------------------------- 120

Query: 121 GAGYGGRNDDRGVGYGGRNDDRGVGYGGRNDDRGVGYGNGGRYGSVGGHGDGYGNNGGGS 180
                                R  GYG RND+RGVGYGNGG YG VGGHGDGYGNNGGG 
Sbjct: 121 ---------------------RDYGYGDRNDNRGVGYGNGGGYGGVGGHGDGYGNNGGGG 180

Query: 181 YGDRYGPSLGGS-----GKGSNNGYND-HSRGNGGRDSGYGDSHGHEGRESGNGSGGGVS 240
           YGDRYGPSLGGS     GKGS+NGY+D HS G GGRD+GYGDSHGHEGR+SG GSGGGVS
Sbjct: 181 YGDRYGPSLGGSGYGSGGKGSDNGYDDRHSHGYGGRDNGYGDSHGHEGRDSGYGSGGGVS 223

Query: 241 GGYGNGGVHGGEYDNSKGSGEEGGNDGGYAVKNSISKEN 274
           GGYGNGGVHGGEYDNSKGSGEEGG DGGYAVKNSISK N
Sbjct: 241 GGYGNGGVHGGEYDNSKGSGEEGGYDGGYAVKNSISKGN 223

BLAST of CsaV3_3G001630 vs. ExPASy TrEMBL
Match: A0A0A0L1V3 (Glycine-rich protein-1 OS=Cucumis sativus OX=3659 GN=Csa_3G011070 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 2.6e-70
Identity = 178/279 (63.80%), Postives = 191/279 (68.46%), Query Frame = 0

Query: 1   MAISRVLCIGFLLFVGLGLASATRTLLDYDPRARRYDYDHPTPRVGYDPSHRDQSYDNAY 60
           MAI R LC+ FLLFV LGLASATRTLLDYDPR  +Y YD P+PRVGYDP H D+SYD AY
Sbjct: 1   MAILRALCLAFLLFVRLGLASATRTLLDYDPRTLQYGYDRPSPRVGYDPGHGDESYDKAY 60

Query: 61  SGSSSKGYGIGDSTLGGSGRYGGGKGHDSGYGGRNDDRSTGYGGRNDDRSDGYGGRNDDR 120
            GSSS+G+GIGDS LGGSG  GGG+ HD                                
Sbjct: 61  GGSSSRGHGIGDSALGGSGYEGGGR-HD-------------------------------- 120

Query: 121 GAGYGGRNDDRGVGYGGRNDDRGVGYGGRNDDRGVGYGN-GGRYGSVGGHGDGYGNNGGG 180
                                   GYG R++DRGVGYGN GG YG VGGHGDGYGNNGGG
Sbjct: 121 -----------------------YGYGDRHNDRGVGYGNYGGGYGGVGGHGDGYGNNGGG 180

Query: 181 SYGDRYGPSLGGS-----GKGSNNGYNDHSRGNGGRDSGYGDSHGHEGRESGNGSGGGVS 240
           SYGDRYGPSLGGS     GKGS NGY+DHSRGNG RD+ YGDSHGH GR+SG GSGGGV+
Sbjct: 181 SYGDRYGPSLGGSGYGSGGKGSGNGYDDHSRGNGARDNSYGDSHGHGGRDSGYGSGGGVT 223

Query: 241 GGYGNGGVHGGEYDNSKGSGEEGGNDGGYAVKNSISKEN 274
           GGYGNGGVHGGEYDNSKGSGEEGG DGGYAVKNSISK N
Sbjct: 241 GGYGNGGVHGGEYDNSKGSGEEGGYDGGYAVKNSISKGN 223

BLAST of CsaV3_3G001630 vs. TAIR 10
Match: AT3G07030.1 (Alba DNA/RNA-binding protein )

HSP 1 Score: 48.5 bits (114), Expect = 9.8e-06
Identity = 89/209 (42.58%), Postives = 103/209 (49.28%), Query Frame = 0

Query: 75  LGGSGRYGGGKGHDSGYGGRNDD-----RSTGYGGRNDD-----RSDGYGGRNDDRGAGY 134
           +GG G YGGG+  D GYGG  DD     R+ GYG R +D     R DGYGG  DD   GY
Sbjct: 213 VGGRGGYGGGR--DGGYGGGRDDGYGERRNDGYGERRNDRYGGGRDDGYGGGRDD---GY 272

Query: 135 GGRNDDRGVGYGGRNDDRGVGYGGRNDDRGVGYGNGGRYGSVGGHGDGYGNNGGGSYGDR 194
           GG  +D   GYGGR      G GG  D+ G G G GG  G  GG GDGYG   G  YG  
Sbjct: 273 GGGRND---GYGGRRGGFRGGRGGGRDE-GYGGGRGGYGGRSGGQGDGYGGGRGDGYGGG 332

Query: 195 YGPSLGGSGKGSNNGYNDHSRGNGGRDSGYGDSHGHEGRESGNGSGGGVSGGYGNGGVHG 254
            G   GG G+G   G     R +GGR  GYG      GR  G G G     G G GG  G
Sbjct: 333 RGDGYGG-GRGDGYGGGRVDRYDGGRRDGYGG-----GRYDGYGGGKSDGYGGGRGGYRG 392

Query: 255 GEYDNSKGSGEEGGNDGGYAVKNSISKEN 274
           G     +G G  G  +GG + ++  S +N
Sbjct: 393 GRGGYGRGRGRMG--NGGRS-RDGASNQN 403

BLAST of CsaV3_3G001630 vs. TAIR 10
Match: AT2G36120.1 (Glycine-rich protein family )

HSP 1 Score: 42.4 bits (98), Expect = 7.0e-04
Identity = 101/259 (39.00%), Postives = 113/259 (43.63%), Query Frame = 0

Query: 11  FLLF-VGLGLASATRTLLDYDPRARRYDYDHPTPRVGYDPSHRDQSYDNAYSG-SSSKGY 70
           FL F +GLGL SA R LL                      S  + +     SG S+  G 
Sbjct: 9   FLCFLIGLGLCSARRALL------------------SSSESEAEVAAYGVNSGLSAGLGV 68

Query: 71  GIGDSTLGGSGRYGGGKGHDSGYGGRNDDRSTGYGGRNDDRSDGYGGRNDDRGAGYGGRN 130
           GIG    GGSG YGGG G   G GG  +    G GG       G GG     G   GG  
Sbjct: 69  GIGGGPGGGSG-YGGGSGEGGGAGGHGEGHIGGGGGGGHGGGAGGGGGGGPGGGYGGGSG 128

Query: 131 DDRGVGYGGRNDDRGVGYGGRNDDRGVGYGNGGRYGSVGGHGDGYGNNGGGSYGDRYGPS 190
           +  G GYGG  +  G G GG     G G G GG +G  GG+G G G   GG YG   G  
Sbjct: 129 EGGGAGYGG-GEAGGHGGGGGGGAGGGGGGGGGAHG--GGYGGGQGAGAGGGYG---GGG 188

Query: 191 LGGSGKGSNNGYNDHSRGNGGRDSGYGDSHGHEGRESGNGSGGGVSGGYGNG---GVHGG 250
            GG G G   G    + G GG  SG G +HG      G G+GGG   GYG G   G HGG
Sbjct: 189 AGGHGGGGGGG----NGGGGGGGSGEGGAHG-----GGYGAGGGAGEGYGGGAGAGGHGG 233

Query: 251 EYDNSKGSGEEGGNDGGYA 265
                 GSG  GG  GGYA
Sbjct: 249 GGGGGGGSGGGGGGGGGYA 233

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAE8650022.13.9e-137100.00hypothetical protein Csa_011604 [Cucumis sativus][more]
XP_031739354.14.3e-12088.38glycine-rich cell wall structural protein 1.8 [Cucumis sativus][more]
XP_031738632.16.6e-11380.67glycine-rich cell wall structural protein 1.8-like [Cucumis sativus][more]
XP_008449164.12.4e-11081.23PREDICTED: glycine-rich cell wall structural protein 1.0-like [Cucumis melo] >KA... [more]
KAE8650023.16.2e-10380.22hypothetical protein Csa_011563 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
P104961.3e-0536.50Glycine-rich cell wall structural protein 1.8 OS=Phaseolus vulgaris OX=3885 PE=2... [more]
P104954.0e-0439.05Glycine-rich cell wall structural protein 1.0 OS=Phaseolus vulgaris OX=3885 PE=2... [more]
Match NameE-valueIdentityDescription
A0A5A7UEU31.1e-11081.23Glycine-rich cell wall structural protein 1.0-like OS=Cucumis melo var. makuwa O... [more]
A0A1S3BM261.1e-11081.23glycine-rich cell wall structural protein 1.0-like OS=Cucumis melo OX=3656 GN=LO... [more]
A0A5A7UHU21.3e-7465.59Glycine-rich cell wall structural protein 1.8-like OS=Cucumis melo var. makuwa O... [more]
A0A1S3BMC41.3e-7465.59glycine-rich cell wall structural protein 1.8-like OS=Cucumis melo OX=3656 GN=LO... [more]
A0A0A0L1V32.6e-7063.80Glycine-rich protein-1 OS=Cucumis sativus OX=3659 GN=Csa_3G011070 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G07030.19.8e-0642.58Alba DNA/RNA-binding protein [more]
AT2G36120.17.0e-0439.00Glycine-rich protein family [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 34..273
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 90..126
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 54..71
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 191..205
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 34..51

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G001630.1CsaV3_3G001630.1mRNA