CsaV3_2G036670 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_2G036670
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Descriptionexpressed protein localized to the inner membrane of the chloroplast.
Locationchr2: 24805134 .. 24811748 (+)
RNA-Seq ExpressionCsaV3_2G036670
SyntenyCsaV3_2G036670
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATAAACCCCCCAAACCAGCAGAAGAGATTTTTTCAAAAATAGAAAAATTGAAAATATCATTTAAATTTGATTAAACAAACCAAAAAAAAAAAAAAAAAAACAATGGGTAAATATTTTTGTCGTTGTAGTTTTTACCATTTTTCATAAATTAAATGTAGAATCAATAGTGCAGTTTATATATTGCAAAGATTCGTAATAGAGGTGAATAAAAACCGGCTATCTTCAGTACAACATTCTCTACTTCGTTCTTCCCGTCTCTTCTCCACTTTCTCTCCAGATCTCTTCTCTGAATCCTCTCCTTTCACATGGCCGCCTGCCTTGCTCCGTCGCTCTCCGTATCTGGTATATCCAATCTTTCCTCTCTTCGCATACCACTTTTAGGTTTTCATTTTCATATGCATATTCATTTGATTCTGCGTTTCTTTCCACTGATCAGCTTGGAAGTAATTATCGCCTATTCTTAGGCTTCTGTGATAATCTATGGAAACGGATGGGTTTAAATGGACAAGAGTTTTGTATTCAATTCTCTGTGGAAGTTTATTATGTATGCCCCCGCGATGATGAATTTTGGATTTTTAATTAATGTTGATTTCGATGTAGTTATAGCTATTGTAGAAGTTCTTTTTTTACTGTTGGATGATAGATTGTTGGGTTTTTTTTTCTTTGTCCCTCGTTTTTAACGAAATATTTTCTTGGAAAGTACTCTAGAAATTGAATTTCTGGATGAAAATTGAAGGTGGTAATCTTGATTGCCTTTTGGAACTTGGGTCGTTTAAAGTTTTAGTTCTATTTCTCTTTCGTAGCTTATTTGTTTTCAACAAGGTAATTCAATTTTCCTTTCTCAATCATTTCTTATGTGTCTAGGGGGATTGATCAAGGCCTCGGATCTCTCTTCAAAGTCAATTTCCTTTGGGCAAATACCAAAACTCGCCATCCGGAGGAAGTGTTCGAAAACCAACCACAAGTTATCAGTCCTTGCTGAGTACAAGTACGTGATGTAGTTCATTGAAGAAAGCTTATTAAATTTAATTTTTTAATGGTTGAAGTATTGTGTTCTTAGTAAAGTCACATAGGCTGTATTTTTGGCATGAATGATAACTGGGGTGGATATAGTGATCAATCATTTCGTGTTGGGCTTCTAAAGTTTCATGAATCTGCAATTATTTCAGACAGCTGGCTTTTTGAGCGATTTTAGTTTCTAAAAATTCAAGTTAGTGGAAGGATGGATCGTATTGCTCAGCTGCAATACAATCGAACATTCTTATGAGGAAAGAAGCTGCTGTTCTTTTCTAAGAAAAAATATATCGTTTCTTTTTGTTCCTTTCTAGTAACACACACACACACGTATATAATGAGAATCAACCTTTCGCTGAGAAGAAAATGAAAGAATACACAGACAGCTAAAAAGCAAGCCCAGAGAAAATAAAGACCACAAGAGAAAGGGCTTCCACTTCTGTAAAATAACACCTATCGAGTAATTAAAAAAGAACCTTCGTAATTTGAGTCTAAAAAGGAACATGATTCTGTAGTACAATTCAGATTTTTGGAGATGATTCTGTACAACAACTTGGCAGAAGAACTTTGGGGCACCCTTGGGGTAATGCACCTGGTGCCGTAGCTAACTGAGTAGCTCTAGAAGCATGTGTACAAGCTTGTAATGAGGGACGTGGTCTTGCTCGTGAGGGTAATGAAATTATCCATGAGGCTAGTAAATGGAATTATGAACTAGCTGCTGCTTGTGAAGTATGGAAGGAGATCAAATTTGAATTTGAGGAAATGGATACTTTGTAACTTGGGTCTCTTTCCAAACCTCTAAACACCATTGTTTCCTCCTACTGGAAAGGTCCCATTGTAAAGCACACATCCTGACAAGCCACAAGAAAAGACCATTTTTCCTTGAAGGTGTAAAAATAAGGACCTGCTTAATCATCTTGTTCAGGTCTTTATGGCAGACCAACTGAAAGTTGAATGTCTCAAAAAAATAACTTCACAAGAGGGTGCGAAGTCGCATCTCTAAAGGAAATGGTCGAGGTCTTCCAGGCCTTCAGGTAAAGAATACAACATAATGAGGCAATAAAAAAAATGCCTCTTTCTTTTTTTTTTGATAAGAGACAAGTATATTCATATAACAAAACAGAACAGCCTAAGGGCGAGGGACAAGAGGGCCCTCCCCGGAAGAAGCTAAGTAACTAAGAAATGATAGCCTTCCAATTATTGAAAATCATAGAAAGGCTATAATTACAAAAGTGTTTGGTGTAATTCGTACTCCACCAAGAAGCTGTTTGTTGAACCACAATCCAAAAAGAATCAAAAGAATTAAATCTATCTTCAAAAATTCTGCTATTCCTTTCTTTCCAAATGCACCACAAAAGGAAGCGAGTCGCGCATTTCCATAGGATGTTTCCTTTAGGGCTATAACCTCTAATGTTAAGACCTTCAATCATCCAACTATCAATCTTGCTAGGAAGACAAAGCTCCAAGTCAAAAATACCAAACAGAGTGTTCCAAGCTTTTTTTGTGAAGAGACAATGTAGAAATAAATGATCCAAGGTTTCCTCATCTTTAGAACATAGGCAACACATCGAGGGGCTAAGCAATGTGTTCTGAACTTTTTTTTGTAGCTTCTCATGGGTGTTGAGGCTTTTGTAAGCAAGCGACCATAAGAAAAACTTCACCTTATTCGGAGTTTTATTCTTCCAAATATGACGAATCAAAGGAACAGCAATGGAGGGAGATCTCTTAGTTAAGTTAAGAAAAGTATTCTTCGTAGTGAAGTTGCCATTCATGTTAGGAATCCATTTAAGACTATCATTCCTTTCAGTGGGGGCCCAAGAATGAAGAATTTCTAAAGCTGAGGCCGCATTGGCAATCTCGTTATCGAGCATATTTCTTCTAAGGGCCAAATTCCAAGAATGAGTAGCAGTACACCAGCATTCAGCCACATAAACGTCCTTATTCAGCGCCAAAGAGAATAAGTTAGGGAATTTTTCTGCAAGTGTTTCCGCGACACACCAGTTATCCTTCCAAAATCTGATTTTTGTTCCTTCTCCCAAAACAAAAGCAGAAAAATTAAAGAATATCTCCTTGTGCTTTAACATACCAGCCCATAATCTGTAAGATTTTCCCCTGTTTGGATCTTTGGTAGACCACCCATTCTCCTCTAGACCATAGATGGCCACAATTAATCGCCTCCATAATGAGGTTTCTTCCTTACTAAACCTCCAAAACCATTTAGTCAGAAGAGCAATATTCTTTTGCCTAAAAGAGCCAATCCCAAGACCACCATAACAAGTTGGGGTGGAAGTGCAGTCCCATTTGACGAGGTGAGCAATTGGATTCGTAGACCCTCTTGTCCAAACAAACTTCCTGATCATCTGTTCCAATCTATTAATAACACCAACTGGAGCTTGAGCAAGGGAGAAAAGATAACAAGGGAGGCTATTGAGAACTGATTGCACCAGAGTTAGTCTACCCCCTTTGGAGAGGGATACATTCCTCCACCTATCAAATTTATATCTGAATCGCTCTTCAAGAGTGTTCCACACCTCTTTTCTATTATGACCCCCTCCAATAGAAAAGCCCAAATATTTAAAGGGAAGACTATCAACCGAGCATCCCGTAGATTCACTAAAAGGGAAGACTGATGATTGTGAATGGATAGTGAAAACTGAAAAGGAAAGTAGTGTACTCAAATCTTAAAACTTAAATAGGTTTTACCTTCCTAGATAAGGTATTTTACTTTTTACTGTAATGAATATCCTAGTAGTGTTTTTTGTGTGTTTACCCAACCCCTTGCCTTTAGGCTGTTGTCTCCTTTTTAATAGTTTATTGAGAAAACAATCCCAAAACGAATTCTGCTGTATATAACTTGAGGGATTCAGGTATAGTGAAGCATGCCTCATTTATTTTTGAGGCAAGAGCCATACTTTTCTTAGATTTTCAAGCTCAAGACAACCTTTTTTTGGTTCTACTTTTAAATTTAAAGAAATTCTATTGCAGATGATAAGGTGAATTCCATCCTCCTTTCCCCTACTAGAAGTCCAAATAATTTTCTACGGTTCCATGGGTTTTAGAACAAGGAGTAAATTGGAATAATATTCTTTTTTAACCCTACATAATAACATTTCCTTTCAAGCGTGCATGGCTTTAAATGGAAAAAATAAAATAGAATAGAAGCAAGCTCGTATTTATTTCTTTTTTATTTTGTACAAGGGAAGAGACCATATAATTAAGAGATAGTGTTAAAATACCGATTGACCCAAAAAATTAAGTTAGTGGACCGAGGTAAATTTAATATTTTATCATCTATTTCTCCATTCACTTGTAGGATTGAAATACGTAGATGACCCAATAAGTGAAAATCAATATTAGTTGGGAAGGAAATAGCATGTGGGGTTTGAACACAGGATTTTTTGGGTTATCGGCTCAGTTACCATGTTAAGTTTAATAAAACTATTTTTCTTATTGAGTATTTGCAATTTAGGTCTTCTTATATGAGAGAAAAATCTTTTACAAATATGGGAAAGACTGATAGGCAATAATGAAAATATTTGACAATAAATATTTATACACAAGTAGTATTAAATTCCAAGATTTTCTTATAGCTCTTTATACATGTATATATTGTGTATATATTGTAGGTTTTCAATTTTACAAATGAATTTTAGTAATTATGATTGTCTACTACTCATAAAATGATAGTTCATTATATACATTTGTTTACTCCTGAAGTAGCTCTTCCATCTGGGTACTTGAAAGAAAGTATTGGATGTTTTTTGGATGCGTTTGCTACTAATTCCTTACTGTTCAAACTTCAATATGGATAACAAAATTTCATTGATGAGGATTCATTAAAACAAGAACCCAACAAGGCATCCTCAAGACAGAAATTAATTGCAAGAAGCAAGGACTGTATATTGTGATAAAAGGAGAAATGAGAATAGATGTCAAATCCAAACATTTCAGGATCAAGTGGTGCCCATGGGTTAGTTTTGTATATTTTGACTTTGACAACGCAAGGCCAAAAACATTAAGAGGGTTGGATTGAGAATCGTCAAAACGAAATGAGTTTTGTATTACAAATCAGGTCCAAAACATTTGATCTAAACATGAGTTTTAGATTACATTATATTACAAACCCATCCCATTATGGGTCACCAAACACCCCCTAATTTCTTGATTTCACTTAGTCATTTTAATAGTAACAAACTTCTTTGTAAATCTTCTTGTTTCTTCCTACGGTTCTAGATTATTAGAAAGGTAAGTTCAGCTTAGCCTTGTAGTGACCTGTTTGGAAAGTTATGTAACCTCTTCTAAGTTTTGAAAGCAGCCCAATTCTATTTACTCCAGAGATTTGTTCCCTGTGAAGAAATTGTTCCTTTATTTTCTTCCTAAAGGATAGTTGGACTAATAGTTACGGGTTTGTTTTTTCTGTTACAGTGATGGTGGTAGAAGTGGAAGTGGAGGTGGTGATTTTGTTGCCGGTTTTTTTCTTGGGGGTGCTGTATTTGGAACCTTAGCTTTTGTTTTTGCTCCCCAGGTGATTAAATGTTTGTCTAAAGTTCTTTCTCCGGGAATGTGACCATTCTGATTAAGCTAGGGTATATTTAAATGTTCGCTGGAACATGTCTGTTTAGATGATTTGATGAAGTCAACAATTTCCTGTGAAGAGTCATTTTCAACTTTATATGCAAAATCAGAAGGCTAATTATTTCTTTGCCCATCATATGTTTTGTTGTAGCATTTGGTTGCATAACTTTATATGAATTTCAGAAATGGCATGCGTCATTAGCTGCTGTTTGTTAGTTATAGGAAAATTACAACTCCTCGATGTGCTATACTCTGTTTTTTTCTTAATCGTTTTAGACTGAGTTCTATGGTTTCTCATAGGTTCAAATTTTATATATAAGCTTTCTCGTTTCTGTTTGTATGGACATAATGCAGATGAGGAGATTTTTACTAAATGAAAACGAGCATGGTTTTAGGAGGGCTAAGCGTCCAGTATACTACGACGAAGGTCAAGATGGTCTTGAGGTAACTATAAATTATAAGTCCTCGAACTCTGATAGAGGTGTTTATTTAGTCTCTTAACTATCCAAGGGATTCGGTTGCATGTATACATCGCTGAGTGGATATGAGTAGTATGGAGTGATATTTTATTTTGTTGAATGGATTGTTTGTTAAAGGGCGACCAATCATCCCATGTTTGTCAAATAGAAAAAGAATTGAAAATGATATCTGTAAAGAGAGTAAAAGTTGATGATTTGTTGTGAAATGCAGGCAACGAGAGAGACATTGAATGCAAAAATAAAACAATTGGGTTCAGCGATTGATAATGTATCATCACGTTTGAAAGGTGGAAAAAAGAAACCACCTCTCCCAGTTGAAGAACCTGATCGGTGGGCTCAAGGTGTGTAAAAATTCAATTTCAACATTGTTCCACAAAGCCTTGTTTTAAAACTCCACCTTAAAGACCATATATGTTGAATTCATGTCGCAATATGCCACAACTCTTAATTGCAACTTCTTTTCTGGATTCATCAAGGTTCAAATCGATTGTTACTTACAGATAAATTAGAATTTGTTATATATATTTGAATTCAATTTTTTTTTTTT

mRNA sequence

ATGGCCGCCTGCCTTGCTCCGTCGCTCTCCGTATCTGGGGGATTGATCAAGGCCTCGGATCTCTCTTCAAAGTCAATTTCCTTTGGGCAAATACCAAAACTCGCCATCCGGAGGAAGTGTTCGAAAACCAACCACAAGTTATCAGTCCTTGCTGAGTACAATGATGGTGGTAGAAGTGGAAGTGGAGGTGGTGATTTTGTTGCCGGTTTTTTTCTTGGGGGTGCTGTATTTGGAACCTTAGCTTTTGTTTTTGCTCCCCAGATGAGGAGATTTTTACTAAATGAAAACGAGCATGGTTTTAGGAGGGCTAAGCGTCCAGTATACTACGACGAAGGTCAAGATGGTCTTGAGGCAACGAGAGAGACATTGAATGCAAAAATAAAACAATTGGGTTCAGCGATTGATAATGTATCATCACGTTTGAAAGGTGGAAAAAAGAAACCACCTCTCCCAGTTGAAGAACCTGATCGGTGGGCTCAAGGTGTGTAA

Coding sequence (CDS)

ATGGCCGCCTGCCTTGCTCCGTCGCTCTCCGTATCTGGGGGATTGATCAAGGCCTCGGATCTCTCTTCAAAGTCAATTTCCTTTGGGCAAATACCAAAACTCGCCATCCGGAGGAAGTGTTCGAAAACCAACCACAAGTTATCAGTCCTTGCTGAGTACAATGATGGTGGTAGAAGTGGAAGTGGAGGTGGTGATTTTGTTGCCGGTTTTTTTCTTGGGGGTGCTGTATTTGGAACCTTAGCTTTTGTTTTTGCTCCCCAGATGAGGAGATTTTTACTAAATGAAAACGAGCATGGTTTTAGGAGGGCTAAGCGTCCAGTATACTACGACGAAGGTCAAGATGGTCTTGAGGCAACGAGAGAGACATTGAATGCAAAAATAAAACAATTGGGTTCAGCGATTGATAATGTATCATCACGTTTGAAAGGTGGAAAAAAGAAACCACCTCTCCCAGTTGAAGAACCTGATCGGTGGGCTCAAGGTGTGTAA

Protein sequence

MAACLAPSLSVSGGLIKASDLSSKSISFGQIPKLAIRRKCSKTNHKLSVLAEYNDGGRSGSGGGDFVAGFFLGGAVFGTLAFVFAPQMRRFLLNENEHGFRRAKRPVYYDEGQDGLEATRETLNAKIKQLGSAIDNVSSRLKGGKKKPPLPVEEPDRWAQGV*
Homology
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BLAST of CsaV3_2G036670 vs. NCBI nr
Match: XP_011650090.1 (uncharacterized protein LOC101222662 [Cucumis sativus] >KGN63425.1 hypothetical protein Csa_022063 [Cucumis sativus])

HSP 1 Score: 318.5 bits (815), Expect = 3.3e-83
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0 

Query: 1   MAACLAPSLSVSGGLIKASDLSSKSISFGQIPKLAIRRKCSKTNHKLSVLAEYNDGGRSG 60
           MAACLAPSLSVSGGLIKASDLSSKSISFGQIPKLAIRRKCSKTNHKLSVLAEYNDGGRSG
Sbjct: 1   MAACLAPSLSVSGGLIKASDLSSKSISFGQIPKLAIRRKCSKTNHKLSVLAEYNDGGRSG 60

Query: 61  SGGGDFVAGFFLGGAVFGTLAFVFAPQMRRFLLNENEHGFRRAKRPVYYDEGQDGLEATR 120
           SGGGDFVAGFFLGGAVFGTLAFVFAPQMRRFLLNENEHGFRRAKRPVYYDEGQDGLEATR
Sbjct: 61  SGGGDFVAGFFLGGAVFGTLAFVFAPQMRRFLLNENEHGFRRAKRPVYYDEGQDGLEATR 120

Query: 121 ETLNAKIKQLGSAIDNVSSRLKGGKKKPPLPVEEPDRWAQGV 163
           ETLNAKIKQLGSAIDNVSSRLKGGKKKPPLPVEEPDRWAQGV
Sbjct: 121 ETLNAKIKQLGSAIDNVSSRLKGGKKKPPLPVEEPDRWAQGV 162

[Close]
BLAST of CsaV3_2G036670 vs. NCBI nr
Match: XP_004145361.2 (uncharacterized protein LOC101208760 [Cucumis sativus] >KGN61721.1 hypothetical protein Csa_006345 [Cucumis sativus])

HSP 1 Score: 300.8 bits (769), Expect = 7.0e-78
Identity = 152/162 (93.83%), Postives = 157/162 (96.91%), Query Frame = 0 

Query: 1   MAACLAPSLSVSGGLIKASDLSSKSISFGQIPKLAIRRKCSKTNHKLSVLAEYNDGGRSG 60
           MAAC APSLSVSGGLIK SDLSSKSISFGQ  KLAIRRKCSKTNHKLSV A+Y+DGGRSG
Sbjct: 1   MAACFAPSLSVSGGLIKPSDLSSKSISFGQTSKLAIRRKCSKTNHKLSVRADYDDGGRSG 60

Query: 61  SGGGDFVAGFFLGGAVFGTLAFVFAPQMRRFLLNENEHGFRRAKRPVYYDEGQDGLEATR 120
           SGGGDFVAGFFLGGAVFGTL++VFAPQ+RRFLLNENEHGFRRAKRPVYYDEGQDGLEATR
Sbjct: 61  SGGGDFVAGFFLGGAVFGTLSYVFAPQIRRFLLNENEHGFRRAKRPVYYDEGQDGLEATR 120

Query: 121 ETLNAKIKQLGSAIDNVSSRLKGGKKKPPLPVEEPDRWAQGV 163
           ETLNAKIKQLGSAIDNVSSRLKGGKKKPPLPVEEPDRWAQGV
Sbjct: 121 ETLNAKIKQLGSAIDNVSSRLKGGKKKPPLPVEEPDRWAQGV 162

[Close]
BLAST of CsaV3_2G036670 vs. NCBI nr
Match: XP_008459202.1 (PREDICTED: uncharacterized protein LOC103498395 [Cucumis melo] >KAA0032090.1 uncharacterized protein E6C27_scaffold223G00620 [Cucumis melo var. makuwa] >TYK13532.1 uncharacterized protein E5676_scaffold299G00050 [Cucumis melo var. makuwa])

HSP 1 Score: 241.5 bits (615), Expect = 5.0e-60
Identity = 127/156 (81.41%), Postives = 138/156 (88.46%), Query Frame = 0 

Query: 1   MAACLAPSLSVSGGLIKASDLSSKSISFGQIPKLAIRRKCSKTNHKLSVLAEYNDGGRSG 60
           MAAC APSLSVSGGLIKASDLSSKS+SFGQ PKLAIRRKCSKTNHKLSV AEYNDGGR  
Sbjct: 1   MAACFAPSLSVSGGLIKASDLSSKSVSFGQTPKLAIRRKCSKTNHKLSVRAEYNDGGR-- 60

Query: 61  SGGGDFVAGFFLGGAVFGTLAFVFAPQMRRFLLNENEHGFRRAKRPVYYDEGQDGLEATR 120
           SGGGDFVAGF LGGAVFGTLA++FAPQ+RR +LNE+EHGFRRAKRP+YYDE   GLE TR
Sbjct: 61  SGGGDFVAGFLLGGAVFGTLAYLFAPQIRRSILNEDEHGFRRAKRPMYYDE---GLEKTR 120

Query: 121 ETLNAKIKQLGSAIDNVSSRLKGGKKKPPLPVEEPD 157
           +TLNAKI QL SAIDNVSSRL+GG   P +PVEE +
Sbjct: 121 QTLNAKISQLNSAIDNVSSRLRGGNNTPAVPVEEAE 151

[Close]
BLAST of CsaV3_2G036670 vs. NCBI nr
Match: XP_023512433.1 (uncharacterized protein LOC111777191 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 233.4 bits (594), Expect = 1.4e-57
Identity = 122/153 (79.74%), Postives = 136/153 (88.89%), Query Frame = 0 

Query: 1   MAACLAPSLSVSGGLIKASDLSSKSISFGQIPKLAIRRKCSKTNHKLSVLAEYNDGGRSG 60
           MAAC APSLSVSGGLIKASDLSSKSISFGQ PKLAI+RKCS+TNHKLSV AEYNDGGR  
Sbjct: 1   MAACFAPSLSVSGGLIKASDLSSKSISFGQTPKLAIQRKCSRTNHKLSVRAEYNDGGR-- 60

Query: 61  SGGGDFVAGFFLGGAVFGTLAFVFAPQMRRFLLNENEHGFRRAKRPVYYDEGQDGLEATR 120
           SGGG+FVAGF LGGAVFGTLA++FAPQ+RR +LNE+E+GFRRA+RP+YYD   DGLE TR
Sbjct: 61  SGGGEFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRRARRPIYYD---DGLEKTR 120

Query: 121 ETLNAKIKQLGSAIDNVSSRLKGGKKKPPLPVE 154
           +TLN KI QL SAIDNVSSRL+GG K P +PVE
Sbjct: 121 QTLNEKIGQLNSAIDNVSSRLRGGNKTPAVPVE 148

[Close]
BLAST of CsaV3_2G036670 vs. NCBI nr
Match: XP_022986629.1 (uncharacterized protein LOC111484314 [Cucurbita maxima])

HSP 1 Score: 233.4 bits (594), Expect = 1.4e-57
Identity = 122/153 (79.74%), Postives = 137/153 (89.54%), Query Frame = 0 

Query: 1   MAACLAPSLSVSGGLIKASDLSSKSISFGQIPKLAIRRKCSKTNHKLSVLAEYNDGGRSG 60
           MAACLAPSLSVSGGLIKASDLSSKSISFGQ PKLAI+RKCS++NHKLSV AEYNDGGR  
Sbjct: 1   MAACLAPSLSVSGGLIKASDLSSKSISFGQAPKLAIQRKCSRSNHKLSVRAEYNDGGR-- 60

Query: 61  SGGGDFVAGFFLGGAVFGTLAFVFAPQMRRFLLNENEHGFRRAKRPVYYDEGQDGLEATR 120
           SGGG+FVAGF LGGAVFGTLA++FAPQ+RR +LNE+E+GFRRA+RP+YYD   DGLE TR
Sbjct: 61  SGGGEFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRRARRPIYYD---DGLEKTR 120

Query: 121 ETLNAKIKQLGSAIDNVSSRLKGGKKKPPLPVE 154
           +TLN KI QL SAIDNVSSRL+GG K P +PVE
Sbjct: 121 QTLNEKIGQLNSAIDNVSSRLRGGNKTPAVPVE 148

[Close]
BLAST of CsaV3_2G036670 vs. ExPASy TrEMBL
Match: A0A0A0LNE4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G445770 PE=4 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 1.6e-83
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0 

Query: 1   MAACLAPSLSVSGGLIKASDLSSKSISFGQIPKLAIRRKCSKTNHKLSVLAEYNDGGRSG 60
           MAACLAPSLSVSGGLIKASDLSSKSISFGQIPKLAIRRKCSKTNHKLSVLAEYNDGGRSG
Sbjct: 1   MAACLAPSLSVSGGLIKASDLSSKSISFGQIPKLAIRRKCSKTNHKLSVLAEYNDGGRSG 60

Query: 61  SGGGDFVAGFFLGGAVFGTLAFVFAPQMRRFLLNENEHGFRRAKRPVYYDEGQDGLEATR 120
           SGGGDFVAGFFLGGAVFGTLAFVFAPQMRRFLLNENEHGFRRAKRPVYYDEGQDGLEATR
Sbjct: 61  SGGGDFVAGFFLGGAVFGTLAFVFAPQMRRFLLNENEHGFRRAKRPVYYDEGQDGLEATR 120

Query: 121 ETLNAKIKQLGSAIDNVSSRLKGGKKKPPLPVEEPDRWAQGV 163
           ETLNAKIKQLGSAIDNVSSRLKGGKKKPPLPVEEPDRWAQGV
Sbjct: 121 ETLNAKIKQLGSAIDNVSSRLKGGKKKPPLPVEEPDRWAQGV 162

[Close]
BLAST of CsaV3_2G036670 vs. ExPASy TrEMBL
Match: A0A0A0LNY8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G233000 PE=4 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 3.4e-78
Identity = 152/162 (93.83%), Postives = 157/162 (96.91%), Query Frame = 0 

Query: 1   MAACLAPSLSVSGGLIKASDLSSKSISFGQIPKLAIRRKCSKTNHKLSVLAEYNDGGRSG 60
           MAAC APSLSVSGGLIK SDLSSKSISFGQ  KLAIRRKCSKTNHKLSV A+Y+DGGRSG
Sbjct: 1   MAACFAPSLSVSGGLIKPSDLSSKSISFGQTSKLAIRRKCSKTNHKLSVRADYDDGGRSG 60

Query: 61  SGGGDFVAGFFLGGAVFGTLAFVFAPQMRRFLLNENEHGFRRAKRPVYYDEGQDGLEATR 120
           SGGGDFVAGFFLGGAVFGTL++VFAPQ+RRFLLNENEHGFRRAKRPVYYDEGQDGLEATR
Sbjct: 61  SGGGDFVAGFFLGGAVFGTLSYVFAPQIRRFLLNENEHGFRRAKRPVYYDEGQDGLEATR 120

Query: 121 ETLNAKIKQLGSAIDNVSSRLKGGKKKPPLPVEEPDRWAQGV 163
           ETLNAKIKQLGSAIDNVSSRLKGGKKKPPLPVEEPDRWAQGV
Sbjct: 121 ETLNAKIKQLGSAIDNVSSRLKGGKKKPPLPVEEPDRWAQGV 162

[Close]
BLAST of CsaV3_2G036670 vs. ExPASy TrEMBL
Match: A0A5D3CQ66 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G00050 PE=4 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 2.4e-60
Identity = 127/156 (81.41%), Postives = 138/156 (88.46%), Query Frame = 0 

Query: 1   MAACLAPSLSVSGGLIKASDLSSKSISFGQIPKLAIRRKCSKTNHKLSVLAEYNDGGRSG 60
           MAAC APSLSVSGGLIKASDLSSKS+SFGQ PKLAIRRKCSKTNHKLSV AEYNDGGR  
Sbjct: 1   MAACFAPSLSVSGGLIKASDLSSKSVSFGQTPKLAIRRKCSKTNHKLSVRAEYNDGGR-- 60

Query: 61  SGGGDFVAGFFLGGAVFGTLAFVFAPQMRRFLLNENEHGFRRAKRPVYYDEGQDGLEATR 120
           SGGGDFVAGF LGGAVFGTLA++FAPQ+RR +LNE+EHGFRRAKRP+YYDE   GLE TR
Sbjct: 61  SGGGDFVAGFLLGGAVFGTLAYLFAPQIRRSILNEDEHGFRRAKRPMYYDE---GLEKTR 120

Query: 121 ETLNAKIKQLGSAIDNVSSRLKGGKKKPPLPVEEPD 157
           +TLNAKI QL SAIDNVSSRL+GG   P +PVEE +
Sbjct: 121 QTLNAKISQLNSAIDNVSSRLRGGNNTPAVPVEEAE 151

[Close]
BLAST of CsaV3_2G036670 vs. ExPASy TrEMBL
Match: A0A1S3C9M4 (uncharacterized protein LOC103498395 OS=Cucumis melo OX=3656 GN=LOC103498395 PE=4 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 2.4e-60
Identity = 127/156 (81.41%), Postives = 138/156 (88.46%), Query Frame = 0 

Query: 1   MAACLAPSLSVSGGLIKASDLSSKSISFGQIPKLAIRRKCSKTNHKLSVLAEYNDGGRSG 60
           MAAC APSLSVSGGLIKASDLSSKS+SFGQ PKLAIRRKCSKTNHKLSV AEYNDGGR  
Sbjct: 1   MAACFAPSLSVSGGLIKASDLSSKSVSFGQTPKLAIRRKCSKTNHKLSVRAEYNDGGR-- 60

Query: 61  SGGGDFVAGFFLGGAVFGTLAFVFAPQMRRFLLNENEHGFRRAKRPVYYDEGQDGLEATR 120
           SGGGDFVAGF LGGAVFGTLA++FAPQ+RR +LNE+EHGFRRAKRP+YYDE   GLE TR
Sbjct: 61  SGGGDFVAGFLLGGAVFGTLAYLFAPQIRRSILNEDEHGFRRAKRPMYYDE---GLEKTR 120

Query: 121 ETLNAKIKQLGSAIDNVSSRLKGGKKKPPLPVEEPD 157
           +TLNAKI QL SAIDNVSSRL+GG   P +PVEE +
Sbjct: 121 QTLNAKISQLNSAIDNVSSRLRGGNNTPAVPVEEAE 151

[Close]
BLAST of CsaV3_2G036670 vs. ExPASy TrEMBL
Match: A0A6J1JGK4 (uncharacterized protein LOC111484314 OS=Cucurbita maxima OX=3661 GN=LOC111484314 PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 6.7e-58
Identity = 122/153 (79.74%), Postives = 137/153 (89.54%), Query Frame = 0 

Query: 1   MAACLAPSLSVSGGLIKASDLSSKSISFGQIPKLAIRRKCSKTNHKLSVLAEYNDGGRSG 60
           MAACLAPSLSVSGGLIKASDLSSKSISFGQ PKLAI+RKCS++NHKLSV AEYNDGGR  
Sbjct: 1   MAACLAPSLSVSGGLIKASDLSSKSISFGQAPKLAIQRKCSRSNHKLSVRAEYNDGGR-- 60

Query: 61  SGGGDFVAGFFLGGAVFGTLAFVFAPQMRRFLLNENEHGFRRAKRPVYYDEGQDGLEATR 120
           SGGG+FVAGF LGGAVFGTLA++FAPQ+RR +LNE+E+GFRRA+RP+YYD   DGLE TR
Sbjct: 61  SGGGEFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRRARRPIYYD---DGLEKTR 120

Query: 121 ETLNAKIKQLGSAIDNVSSRLKGGKKKPPLPVE 154
           +TLN KI QL SAIDNVSSRL+GG K P +PVE
Sbjct: 121 QTLNEKIGQLNSAIDNVSSRLRGGNKTPAVPVE 148

[Close]
BLAST of CsaV3_2G036670 vs. TAIR 10
Match: AT5G16660.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 133.7 bits (335), Expect = 1.4e-31
Identity = 89/164 (54.27%), Postives = 113/164 (68.90%), Query Frame = 0 

Query: 1   MAACLAPS-LSVSG----GLIKASDLS--SKSISFGQIPKLAIRRKCSKTNHKLSVLAEY 60
           MA+C+A + LS+SG      +KA+ LS  +K  S  +   L I +K ++T  K SV A Y
Sbjct: 1   MASCIATAPLSLSGVSQSHYVKANGLSTTTKLSSICKTSDLTIHKKSNRT-RKFSVSAGY 60

Query: 61  NDGGRSGSGGGDFVAGFFLGGAVFGTLAFVFAPQMRRFLLN-ENEHGFRRAKRPVYYDEG 120
            DG RSGS  GDF+AGF LGGAVFG +A++FAPQ+RR +LN E+E+GF + K+P YYDE 
Sbjct: 61  RDGSRSGS-SGDFIAGFLLGGAVFGAVAYIFAPQIRRSVLNEEDEYGFEKPKQPTYYDE- 120

Query: 121 QDGLEATRETLNAKIKQLGSAIDNVSSRLKGGKKKPP---LPVE 154
             GLE TRETLN KI QL SAIDNVSSRL+G +K      +PVE
Sbjct: 121 --GLEKTRETLNEKIGQLNSAIDNVSSRLRGREKNTSSLNVPVE 159

[Close]
BLAST of CsaV3_2G036670 vs. TAIR 10
Match: AT5G16660.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02900.1); Has 106 Blast hits to 106 proteins in 32 species: Archae - 0; Bacteria - 28; Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 126.3 bits (316), Expect = 2.2e-29
Identity = 88/164 (53.66%), Postives = 112/164 (68.29%), Query Frame = 0 

Query: 1   MAACLAPS-LSVSG----GLIKASDLS--SKSISFGQIPKLAIRRKCSKTNHKLSVLAEY 60
           MA+C+A + LS+SG      +KA+ LS  +K  S  +   L I +K ++T  K SV A  
Sbjct: 1   MASCIATAPLSLSGVSQSHYVKANGLSTTTKLSSICKTSDLTIHKKSNRT-RKFSVSA-- 60

Query: 61  NDGGRSGSGGGDFVAGFFLGGAVFGTLAFVFAPQMRRFLLN-ENEHGFRRAKRPVYYDEG 120
            DG RSGS  GDF+AGF LGGAVFG +A++FAPQ+RR +LN E+E+GF + K+P YYDE 
Sbjct: 61  GDGSRSGS-SGDFIAGFLLGGAVFGAVAYIFAPQIRRSVLNEEDEYGFEKPKQPTYYDE- 120

Query: 121 QDGLEATRETLNAKIKQLGSAIDNVSSRLKGGKKKPP---LPVE 154
             GLE TRETLN KI QL SAIDNVSSRL+G +K      +PVE
Sbjct: 121 --GLEKTRETLNEKIGQLNSAIDNVSSRLRGREKNTSSLNVPVE 157

[Close]
BLAST of CsaV3_2G036670 vs. TAIR 10
Match: AT3G02900.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G16660.1). )

HSP 1 Score: 125.6 bits (314), Expect = 3.8e-29
Identity = 70/120 (58.33%), Postives = 84/120 (70.00%), Query Frame = 0 

Query: 41  SKTNHKLSVLAEYNDGGRSGSGGGDFVAGFFLGGAVFGTLAFVFAPQMRRFLLNENEHGF 100
           S  +HKLSV A Y  GG  G G  DFV GF LG AVFGTLA++FAPQ+RR +L+ENE+GF
Sbjct: 37  SNRSHKLSVSAGYR-GGSKGGGSSDFVTGFLLGSAVFGTLAYIFAPQIRRSVLSENEYGF 96

Query: 101 RRAKRPVYYDEGQDGLEATRETLNAKIKQLGSAIDNVSSRLKGGK-------KKPPLPVE 154
           ++ ++P+YYDE   GLE  RE LN KI QL SAID VSSRLKGG+         P +PVE
Sbjct: 97  KKPEQPMYYDE---GLEERREILNEKIGQLNSAIDKVSSRLKGGRSGSSKNTSSPSVPVE 152

[Close]
BLAST of CsaV3_2G036670 vs. TAIR 10
Match: AT3G02900.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G16660.1); Has 80 Blast hits to 80 proteins in 21 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 123.2 bits (308), Expect = 1.9e-28
Identity = 79/160 (49.38%), Postives = 102/160 (63.75%), Query Frame = 0 

Query: 1   MAACLAPSLSVSGGLIKASDLSSKSISFGQIPKLAIRRKCSKTNHKLSVLAEYNDGGRSG 60
           MA+ +A  +S SG     +  +  +I   +   L ++ K S  +HKLSV A Y  GG  G
Sbjct: 1   MASLVAAPISFSGDSHVKAHRNFNAIR--KSSTLTVQTK-SNRSHKLSVSAGYR-GGSKG 60

Query: 61  SGGGDFVAGFFLGGAVFGTLAFVFAPQMRRFLLNENEHGFRRAKRPVYYDEGQDGLEATR 120
            G  DFV GF LG AVFGTLA++FAPQ+RR +L+ENE+GF++ ++P+YYDE   GLE  R
Sbjct: 61  GGSSDFVTGFLLGSAVFGTLAYIFAPQIRRSVLSENEYGFKKPEQPMYYDE---GLEERR 120

Query: 121 ETLNAKIKQLGSAIDNVSSRLKGGK-------KKPPLPVE 154
           E LN KI QL SAID VSSRLKGG+         P +PVE
Sbjct: 121 EILNEKIGQLNSAIDKVSSRLKGGRSGSSKNTSSPSVPVE 153

[Close]
BLAST of CsaV3_2G036670 vs. TAIR 10
Match: AT1G42960.1 (expressed protein localized to the inner membrane of the chloroplast. )

HSP 1 Score: 70.9 bits (172), Expect = 1.1e-12
Identity = 47/118 (39.83%), Postives = 63/118 (53.39%), Query Frame = 0 

Query: 25  SISFGQIPKLAIRRKCSKTNHKLSVLAEYNDGGRSGSGGGDFVAGFFLGGAVFGTLAFVF 84
           S+SFG      +     +T   L++ + Y D   SGS  G FV GF LGG + G L  V+
Sbjct: 34  SVSFGLNHSNKLHISAPRTKRILTIQSAYRDDDGSGS-TGLFVGGFILGGLIVGALGCVY 93

Query: 85  APQMRRFLLNENEHGFRRAKRPVYYDEGQDGLEATRETLNAKIKQLGSAIDNVSSRLK 143
           APQ+ + +   +     R      YDE +  LE TR+ L  KI QL SAID+VSS+LK
Sbjct: 94  APQISKAIAGADRKDLMRKLPKFIYDE-EKALEKTRKVLAEKIAQLNSAIDDVSSQLK 149

The following BLAST results are available for this feature:
BLAST of CsaV3_2G036670 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011650090.13.3e-83100.00uncharacterized protein LOC101222662 [Cucumis sativus] >KGN63425.1 hypothetical ... [more]
XP_004145361.27.0e-7893.83uncharacterized protein LOC101208760 [Cucumis sativus] >KGN61721.1 hypothetical ... [more]
XP_008459202.15.0e-6081.41PREDICTED: uncharacterized protein LOC103498395 [Cucumis melo] >KAA0032090.1 unc... [more]
XP_023512433.11.4e-5779.74uncharacterized protein LOC111777191 [Cucurbita pepo subsp. pepo][more]
XP_022986629.11.4e-5779.74uncharacterized protein LOC111484314 [Cucurbita maxima][more]
BLAST of CsaV3_2G036670 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_2G036670 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LNE41.6e-83100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G445770 PE=4 SV=1[more]
A0A0A0LNY83.4e-7893.83Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G233000 PE=4 SV=1[more]
A0A5D3CQ662.4e-6081.41Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3C9M42.4e-6081.41uncharacterized protein LOC103498395 OS=Cucumis melo OX=3656 GN=LOC103498395 PE=... [more]
A0A6J1JGK46.7e-5879.74uncharacterized protein LOC111484314 OS=Cucurbita maxima OX=3661 GN=LOC111484314... [more]
BLAST of CsaV3_2G036670 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G16660.11.4e-3154.27unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT5G16660.22.2e-2953.66unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G02900.23.8e-2958.33unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G02900.11.9e-2849.38unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G42960.11.1e-1239.83expressed protein localized to the inner membrane of the chloroplast. [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 138..162
NoneNo IPR availablePANTHERPTHR34048:SF3LOW-DENSITY RECEPTOR-LIKE PROTEINcoord: 1..156
NoneNo IPR availablePANTHERPTHR34048LOW-DENSITY RECEPTOR-LIKE PROTEINcoord: 1..156

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_2G036670.1CsaV3_2G036670.1mRNA