CsaV3_2G036510 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_2G036510
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	H/ACA ribonucleoprotein complex non-core subunit NAF1
Location	chr2: 24620166 .. 24624101 (+)
RNA-Seq Expression	CsaV3_2G036510
Synteny	CsaV3_2G036510

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAAACCCTAAAAATAAATATTTGCCTCTTCACTCTCATAGTCTCACGTGCTCGGTCCACGCCTCCACGCCTCCACGCCTTTTTCTTCTTCCTCTTCAAACCACCACCACCCTCGTTGCAAATACTTACATCTTCTTTCTTCTAGGTCTATCAATAAGGAAAGCAAAAGAAGAGAGGGTGAGGTGCAGTCTTCGAACACACATTGACAGACGGAGGCACCAGACATTCACGTATACAGAGAGTGAGTTTCTTTCTTCTGCAAACCACACACGCAGCATCCGACGCCTGACGGTTTAGGCGGGTTTCGAGCGGTTTTCCTGCGGGGTTTAGCCGTGGGTTTTTCGTGGCGGCAGTTGGTTTTTAGTTCGGTTGCACTGGGTTGCTCAACACCTTGATCTCCGTTCAGAGGAGGTGATTTCGGTGGGTTTTGGGTCTCGGTTTCAGAGGCAGCAGCCGACACCAGCTCAGCTCTCTTGTCTTTCTTCTCGTATTGTTGCTGTCGTTTTCTTTCTTCCGATAACGCTGCTGTAACCTCCCTTCTTGTTACTCTGTCACTGGTATTCTCCCAAAACTCTTTCTTCTTCCTCTTAAAATCGTCATCTCCTCTTCTTCTGCAGCTTAGTGCCGCCGCCGGCTCTCTCGTCTTTGTCTTCCATTTTCAGTTGAAAAACTTTAAATTCATTAAAACTTTAAATTCGTTATATGCTTTGCATTTCAAGATAATAAGTTGAGATTCTCCGCTTTAGCTGCAACTATATGTAGTCTGGATAGCTAGAGATATAGATGTTTACTTTTGTTCCCTTTCAATCGAATCACAATTTTGGTGCTCTTCGATGGTAGAGTTTGCTCCCAACACCAACACTGCTTCTGCCCCCGACGGCCTTCTTCACGATTCTTCTAAGCTTAAGAACTCTGAACCACTTGACTCTTTTGACTCCAAGGCCATCGATTACTCACTCGTCGATTCCTTCCTCGATTACGATTCTTTAAATGACTGGTTTGACGAATTAACATCGCCCAATATGGTCGATACACAAACGCTTCTTCCTGAAGGAGATGCCCATTTGAGTCAATCCGTTCAAAAGTCTGTTCCAGTTATTGATGGAGTTCAATCAAATTTTGTCAGGTCTGAAGATTTTAAAATAGAAATGAAGACGAGTGGTGAGGCTTGTAGTAACTCTACAGATTTCAATTCCATCACTGAAGAAGGGATGCCAAAGGTTACCTTGGTTCTTGATGGTGAGGCTTGTAGTAACTCTACAGATTTCAATTCCATCATTGAAGAAGGGATGTCAAAGGTTAGCTTGGTTCTTGATGGTGGGTGCATTTCGAAGGTTGAGTTGGAGTCTGAAGCGGATGATGGTGAAGGTGATGTGGAGTCAGAGGGCACAAGTTCAGCTTCAACATCTAGTAGTAGTAGCTCTGGGGGAAGTAGCGACAATGAAGTAGATGAAGAGGAAGAGGATTCATCTTCTTCCACTAGTGCCGGTTGCGATGATGAAGAAGAGAAGGAGAACATTGTAGAAGCGGAGGGAAAGAGAGAAATTGGTGAACTTGAAGAAGGTGAGATAAGGGATGCTGATGATGAGGACGAAGAAGCTTTTGCAGATGACATGGTTGCGTGGGATAATGACGGTGAAGACCTCAAGGAGGATGACGAAGACCTTGATGGAGAAGAGGAAGAGGCTGGGGCTGAAGGAGGGCCAATTACTTCTAAAAATGAGCTTAAGGTTCGTTTTCTGTTTACATCCTGATGCTTGCAAGTAGTCCTTTGGACTTTGTACACGTTTAAATGAAGACTGTATTTTCGGTGCCCAAGGTTGATGTTGCAATTTATTAATAGTCAATATTGGTGCATTTCTTCTTTTTGGCTTGCTTGTAGGTTCTTCCTCCAGTTCCTCAAGTGCATGCTACGTTGCAGCCGCACCACCAAATGCTTCCTGTTGGAGTTGTTTTGTCAGTAAGTACCTCGATTTTAATAGAATTAAGTACTTCAGTTCTTTCTTTGTTTTCCCATTTCATGGTTTTCATTGTTTATGCAACTAAACGATCTTTAAGAGGCAGCCCTTCTGAGTATTGATGTTATGCAATTATACTTGAGTTGAATTTGAAGTTCTGTTACTACTTTTCAGATGCTTGGCAATCAAGTCATTGTAGAGGGTGTTGAGAAGCACAATCCTCTCAGCGAAGGCTCTATTCTTTGGATAACTGAAGCTAGATCTCCATTGGGGTTGGTAGATGAAATCTTTGGACCTGTAAAAAATCCTTACTATTCTGTAAGGTACAATTCTGAAAGTGAAGTTCCTCTTGGAATTAGTGGTGGTACCCACGTCTCCTTCGTTCTTGAGTTTGCAGATTATGTTCTAAATAACAAAGACCTATACAAGAAGGGGTATGATGCATCTGGAGTGAATGATGAAGAGGTGTCAGATGATGGTGAGTTCTCAGATGATGAGAAAGAGCTTGAGTTCAAGAAAATGCAAAGGTTGGCTAAGAGGGCTATGAATGATAACCAACAGATCAATGCAAACAAAAATAATGGTAGGAAGAAGAAAAACAATGCTAAAGCCAGGAAATTTGGTGAGCGTACATTTGAGAATGCGAATGTTCCTGATGAGCCCAAGAAATTTTACGGCCAGTGCACTCCTGAGCAAGCAAAAATATCTGAAGGCAGAAAATTTGATCACCCTACACCACATCAAGCAAAGATGGATATGGTTAGGCCATCTCCGAATCAAAACCAGCAAACTGGCCCTCCTTTGGCACCATTTGTATATCACGGTGGTTGTCCAAACCCTTCAGTTGCAGAACAATGCTTTATGAATGGAACTGGTATTATGTCATCGTTTCCCCCTACGTACAACCCCTGCTTTACACCAGCAATGAATGGTATTAGGCCAGCAGAAATGCCATTTCAGTTTCAGCAGCAGCAGAATCCGTTCTTTCCCAACGGTCTTCCAATGAATGGCATGCCTTGGTTATTACAGAATCCTGCACAACAAATGCCACAAATGCCTCAAATGCCTCAAATGCCTCAAATGCCTCAAATGCCTCAAATGCCTATGCTGAATACATTTGCTGGAGCAGCTTATCCACAGGGGTTCGTAGGTCCATCATCTGCCCTACCTAATTCCTCGACAGCGGTAGGGGCACAAGGAATCCATTCCGGTGGACTACAGTTTGGACAGAATCAAAACAACTTGCAGCCTGCAGCACAACAATTCAATCCCCCAAACTCGCACCCGCCAGGTACATTTTCAGGAAACGTAGCACCACAACAGTTTAACCAAAACTCATCTTCAAAGCAGGGAAGAAAATCTCATGGTCGCGGAGGAAATCATTTTAGAGGTAGAAGAGGTGGACGACAAAGTAGATGAACCATTACTCGTTTCTTCATGATAGAGGTTTGCATATGTGCAATTCCTAAATTTTGATTACAATCTGTCGTGTACAATCCTTTCATCAATCTGGGTTGGATGAGAATTAGGAAGTTAGTAGTCGCAATCATTTATTTCAGGGGTTAGTTTCTTTTTAATCGCTTGTTGGCTATATTCGTCTTCTCTACTGCACAATTCCTCCTGAGATCTATTTTAGAATTTGTTTAGTCGTGGTTTTATGCTCTAAAATAATTTCTTGCTGTCTCAGTCCGCCATTTAAAACAAGAAAAAAATATATTTGTCTTTTAAAACACATTAACTACTAACATTCTTCCTTGAAACATTTATGTTCAAAAATTTATTAGTGTTTCCATTATTGCTTTCATTCTTATTACAGTAAATTTATTGTGTTGATGTGTGCATATTTATTTATTTGTACTGAAAAATAGGGGGTGAAAAAAGAAGGGATAAAAGATAAGTAATACTGTATTGAAGACTTGTGATATATAACAACCAGAGTAATTTTCAACTTTATTTTTTTCAAAAACTTATGTTTGTG

mRNA sequence

ATGAAGACGAGTGGTGAGGCTTGTAGTAACTCTACAGATTTCAATTCCATCACTGAAGAAGGGATGCCAAAGGTTACCTTGGTTCTTGATGGTGAGGCTTGTAGTAACTCTACAGATTTCAATTCCATCATTGAAGAAGGGATGTCAAAGGTTAGCTTGGTTCTTGATGGTGGGTGCATTTCGAAGGTTGAGTTGGAGTCTGAAGCGGATGATGGTGAAGGTGATGTGGAGTCAGAGGGCACAAGTTCAGCTTCAACATCTAGTAGTAGTAGCTCTGGGGGAAGTAGCGACAATGAAGTAGATGAAGAGGAAGAGGATTCATCTTCTTCCACTAGTGCCGGTTGCGATGATGAAGAAGAGAAGGAGAACATTGTAGAAGCGGAGGGAAAGAGAGAAATTGGTGAACTTGAAGAAGGTGAGATAAGGGATGCTGATGATGAGGACGAAGAAGCTTTTGCAGATGACATGGTTGCGTGGGATAATGACGGTGAAGACCTCAAGGAGGATGACGAAGACCTTGATGGAGAAGAGGAAGAGGCTGGGGCTGAAGGAGGGCCAATTACTTCTAAAAATGAGCTTAAGGTTCTTCCTCCAGTTCCTCAAGTGCATGCTACGTTGCAGCCGCACCACCAAATGCTTCCTGTTGGAGTTGTTTTGTCAATGCTTGGCAATCAAGTCATTGTAGAGGGTGTTGAGAAGCACAATCCTCTCAGCGAAGGCTCTATTCTTTGGATAACTGAAGCTAGATCTCCATTGGGGTTGGTAGATGAAATCTTTGGACCTGTAAAAAATCCTTACTATTCTGTAAGGTACAATTCTGAAAGTGAAGTTCCTCTTGGAATTAGTGGTGGTACCCACGTCTCCTTCGTTCTTGAGTTTGCAGATTATGTTCTAAATAACAAAGACCTATACAAGAAGGGGTATGATGCATCTGGAGTGAATGATGAAGAGGTGTCAGATGATGGTGAGTTCTCAGATGATGAGAAAGAGCTTGAGTTCAAGAAAATGCAAAGGTTGGCTAAGAGGGCTATGAATGATAACCAACAGATCAATGCAAACAAAAATAATGGTAGGAAGAAGAAAAACAATGCTAAAGCCAGGAAATTTGGTGAGCGTACATTTGAGAATGCGAATGTTCCTGATGAGCCCAAGAAATTTTACGGCCAGTGCACTCCTGAGCAAGCAAAAATATCTGAAGGCAGAAAATTTGATCACCCTACACCACATCAAGCAAAGATGGATATGGTTAGGCCATCTCCGAATCAAAACCAGCAAACTGGCCCTCCTTTGGCACCATTTGTATATCACGGTGGTTGTCCAAACCCTTCAGTTGCAGAACAATGCTTTATGAATGGAACTGGTATTATGTCATCGTTTCCCCCTACGTACAACCCCTGCTTTACACCAGCAATGAATGGTATTAGGCCAGCAGAAATGCCATTTCAGTTTCAGCAGCAGCAGAATCCGTTCTTTCCCAACGGTCTTCCAATGAATGGCATGCCTTGGTTATTACAGAATCCTGCACAACAAATGCCACAAATGCCTCAAATGCCTCAAATGCCTCAAATGCCTCAAATGCCTCAAATGCCTATGCTGAATACATTTGCTGGAGCAGCTTATCCACAGGGGTTCGTAGGTCCATCATCTGCCCTACCTAATTCCTCGACAGCGGTAGGGGCACAAGGAATCCATTCCGGTGGACTACAGTTTGGACAGAATCAAAACAACTTGCAGCCTGCAGCACAACAATTCAATCCCCCAAACTCGCACCCGCCAGGTACATTTTCAGGAAACGTAGCACCACAACAGTTTAACCAAAACTCATCTTCAAAGCAGGGAAGAAAATCTCATGGTCGCGGAGGAAATCATTTTAGAGGTAGAAGAGGTGGACGACAAAGTAGATGA

Coding sequence (CDS)

ATGAAGACGAGTGGTGAGGCTTGTAGTAACTCTACAGATTTCAATTCCATCACTGAAGAAGGGATGCCAAAGGTTACCTTGGTTCTTGATGGTGAGGCTTGTAGTAACTCTACAGATTTCAATTCCATCATTGAAGAAGGGATGTCAAAGGTTAGCTTGGTTCTTGATGGTGGGTGCATTTCGAAGGTTGAGTTGGAGTCTGAAGCGGATGATGGTGAAGGTGATGTGGAGTCAGAGGGCACAAGTTCAGCTTCAACATCTAGTAGTAGTAGCTCTGGGGGAAGTAGCGACAATGAAGTAGATGAAGAGGAAGAGGATTCATCTTCTTCCACTAGTGCCGGTTGCGATGATGAAGAAGAGAAGGAGAACATTGTAGAAGCGGAGGGAAAGAGAGAAATTGGTGAACTTGAAGAAGGTGAGATAAGGGATGCTGATGATGAGGACGAAGAAGCTTTTGCAGATGACATGGTTGCGTGGGATAATGACGGTGAAGACCTCAAGGAGGATGACGAAGACCTTGATGGAGAAGAGGAAGAGGCTGGGGCTGAAGGAGGGCCAATTACTTCTAAAAATGAGCTTAAGGTTCTTCCTCCAGTTCCTCAAGTGCATGCTACGTTGCAGCCGCACCACCAAATGCTTCCTGTTGGAGTTGTTTTGTCAATGCTTGGCAATCAAGTCATTGTAGAGGGTGTTGAGAAGCACAATCCTCTCAGCGAAGGCTCTATTCTTTGGATAACTGAAGCTAGATCTCCATTGGGGTTGGTAGATGAAATCTTTGGACCTGTAAAAAATCCTTACTATTCTGTAAGGTACAATTCTGAAAGTGAAGTTCCTCTTGGAATTAGTGGTGGTACCCACGTCTCCTTCGTTCTTGAGTTTGCAGATTATGTTCTAAATAACAAAGACCTATACAAGAAGGGGTATGATGCATCTGGAGTGAATGATGAAGAGGTGTCAGATGATGGTGAGTTCTCAGATGATGAGAAAGAGCTTGAGTTCAAGAAAATGCAAAGGTTGGCTAAGAGGGCTATGAATGATAACCAACAGATCAATGCAAACAAAAATAATGGTAGGAAGAAGAAAAACAATGCTAAAGCCAGGAAATTTGGTGAGCGTACATTTGAGAATGCGAATGTTCCTGATGAGCCCAAGAAATTTTACGGCCAGTGCACTCCTGAGCAAGCAAAAATATCTGAAGGCAGAAAATTTGATCACCCTACACCACATCAAGCAAAGATGGATATGGTTAGGCCATCTCCGAATCAAAACCAGCAAACTGGCCCTCCTTTGGCACCATTTGTATATCACGGTGGTTGTCCAAACCCTTCAGTTGCAGAACAATGCTTTATGAATGGAACTGGTATTATGTCATCGTTTCCCCCTACGTACAACCCCTGCTTTACACCAGCAATGAATGGTATTAGGCCAGCAGAAATGCCATTTCAGTTTCAGCAGCAGCAGAATCCGTTCTTTCCCAACGGTCTTCCAATGAATGGCATGCCTTGGTTATTACAGAATCCTGCACAACAAATGCCACAAATGCCTCAAATGCCTCAAATGCCTCAAATGCCTCAAATGCCTCAAATGCCTATGCTGAATACATTTGCTGGAGCAGCTTATCCACAGGGGTTCGTAGGTCCATCATCTGCCCTACCTAATTCCTCGACAGCGGTAGGGGCACAAGGAATCCATTCCGGTGGACTACAGTTTGGACAGAATCAAAACAACTTGCAGCCTGCAGCACAACAATTCAATCCCCCAAACTCGCACCCGCCAGGTACATTTTCAGGAAACGTAGCACCACAACAGTTTAACCAAAACTCATCTTCAAAGCAGGGAAGAAAATCTCATGGTCGCGGAGGAAATCATTTTAGAGGTAGAAGAGGTGGACGACAAAGTAGATGA

Protein sequence

MKTSGEACSNSTDFNSITEEGMPKVTLVLDGEACSNSTDFNSIIEEGMSKVSLVLDGGCISKVELESEADDGEGDVESEGTSSASTSSSSSSGGSSDNEVDEEEEDSSSSTSAGCDDEEEKENIVEAEGKREIGELEEGEIRDADDEDEEAFADDMVAWDNDGEDLKEDDEDLDGEEEEAGAEGGPITSKNELKVLPPVPQVHATLQPHHQMLPVGVVLSMLGNQVIVEGVEKHNPLSEGSILWITEARSPLGLVDEIFGPVKNPYYSVRYNSESEVPLGISGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVSDDGEFSDDEKELEFKKMQRLAKRAMNDNQQINANKNNGRKKKNNAKARKFGERTFENANVPDEPKKFYGQCTPEQAKISEGRKFDHPTPHQAKMDMVRPSPNQNQQTGPPLAPFVYHGGCPNPSVAEQCFMNGTGIMSSFPPTYNPCFTPAMNGIRPAEMPFQFQQQQNPFFPNGLPMNGMPWLLQNPAQQMPQMPQMPQMPQMPQMPQMPMLNTFAGAAYPQGFVGPSSALPNSSTAVGAQGIHSGGLQFGQNQNNLQPAAQQFNPPNSHPPGTFSGNVAPQQFNQNSSSKQGRKSHGRGGNHFRGRRGGRQSR*

Homology

[Close]

BLAST of CsaV3_2G036510 vs. NCBI nr
Match: XP_031736890.1 (H/ACA ribonucleoprotein complex non-core subunit NAF1 isoform X2 [Cucumis sativus])

HSP 1 Score: 1219.1 bits (3153), Expect = 0.0e+00
Identity = 634/634 (100.00%), Postives = 634/634 (100.00%), Query Frame = 0


Query: 1   MKTSGEACSNSTDFNSITEEGMPKVTLVLDGEACSNSTDFNSIIEEGMSKVSLVLDGGCI 60
           MKTSGEACSNSTDFNSITEEGMPKVTLVLDGEACSNSTDFNSIIEEGMSKVSLVLDGGCI
Sbjct: 43  MKTSGEACSNSTDFNSITEEGMPKVTLVLDGEACSNSTDFNSIIEEGMSKVSLVLDGGCI 102

Query: 61  SKVELESEADDGEGDVESEGTSSASTSSSSSSGGSSDNEVDEEEEDSSSSTSAGCDDEEE 120
           SKVELESEADDGEGDVESEGTSSASTSSSSSSGGSSDNEVDEEEEDSSSSTSAGCDDEEE
Sbjct: 103 SKVELESEADDGEGDVESEGTSSASTSSSSSSGGSSDNEVDEEEEDSSSSTSAGCDDEEE 162

Query: 121 KENIVEAEGKREIGELEEGEIRDADDEDEEAFADDMVAWDNDGEDLKEDDEDLDGEEEEA 180
           KENIVEAEGKREIGELEEGEIRDADDEDEEAFADDMVAWDNDGEDLKEDDEDLDGEEEEA
Sbjct: 163 KENIVEAEGKREIGELEEGEIRDADDEDEEAFADDMVAWDNDGEDLKEDDEDLDGEEEEA 222

Query: 181 GAEGGPITSKNELKVLPPVPQVHATLQPHHQMLPVGVVLSMLGNQVIVEGVEKHNPLSEG 240
           GAEGGPITSKNELKVLPPVPQVHATLQPHHQMLPVGVVLSMLGNQVIVEGVEKHNPLSEG
Sbjct: 223 GAEGGPITSKNELKVLPPVPQVHATLQPHHQMLPVGVVLSMLGNQVIVEGVEKHNPLSEG 282

Query: 241 SILWITEARSPLGLVDEIFGPVKNPYYSVRYNSESEVPLGISGGTHVSFVLEFADYVLNN 300
           SILWITEARSPLGLVDEIFGPVKNPYYSVRYNSESEVPLGISGGTHVSFVLEFADYVLNN
Sbjct: 283 SILWITEARSPLGLVDEIFGPVKNPYYSVRYNSESEVPLGISGGTHVSFVLEFADYVLNN 342

Query: 301 KDLYKKGYDASGVNDEEVSDDGEFSDDEKELEFKKMQRLAKRAMNDNQQINANKNNGRKK 360
           KDLYKKGYDASGVNDEEVSDDGEFSDDEKELEFKKMQRLAKRAMNDNQQINANKNNGRKK
Sbjct: 343 KDLYKKGYDASGVNDEEVSDDGEFSDDEKELEFKKMQRLAKRAMNDNQQINANKNNGRKK 402

Query: 361 KNNAKARKFGERTFENANVPDEPKKFYGQCTPEQAKISEGRKFDHPTPHQAKMDMVRPSP 420
           KNNAKARKFGERTFENANVPDEPKKFYGQCTPEQAKISEGRKFDHPTPHQAKMDMVRPSP
Sbjct: 403 KNNAKARKFGERTFENANVPDEPKKFYGQCTPEQAKISEGRKFDHPTPHQAKMDMVRPSP 462

Query: 421 NQNQQTGPPLAPFVYHGGCPNPSVAEQCFMNGTGIMSSFPPTYNPCFTPAMNGIRPAEMP 480
           NQNQQTGPPLAPFVYHGGCPNPSVAEQCFMNGTGIMSSFPPTYNPCFTPAMNGIRPAEMP
Sbjct: 463 NQNQQTGPPLAPFVYHGGCPNPSVAEQCFMNGTGIMSSFPPTYNPCFTPAMNGIRPAEMP 522

Query: 481 FQFQQQQNPFFPNGLPMNGMPWLLQNPAQQMPQMPQMPQMPQMPQMPQMPMLNTFAGAAY 540
           FQFQQQQNPFFPNGLPMNGMPWLLQNPAQQMPQMPQMPQMPQMPQMPQMPMLNTFAGAAY
Sbjct: 523 FQFQQQQNPFFPNGLPMNGMPWLLQNPAQQMPQMPQMPQMPQMPQMPQMPMLNTFAGAAY 582

Query: 541 PQGFVGPSSALPNSSTAVGAQGIHSGGLQFGQNQNNLQPAAQQFNPPNSHPPGTFSGNVA 600
           PQGFVGPSSALPNSSTAVGAQGIHSGGLQFGQNQNNLQPAAQQFNPPNSHPPGTFSGNVA
Sbjct: 583 PQGFVGPSSALPNSSTAVGAQGIHSGGLQFGQNQNNLQPAAQQFNPPNSHPPGTFSGNVA 642

Query: 601 PQQFNQNSSSKQGRKSHGRGGNHFRGRRGGRQSR 635
           PQQFNQNSSSKQGRKSHGRGGNHFRGRRGGRQSR
Sbjct: 643 PQQFNQNSSSKQGRKSHGRGGNHFRGRRGGRQSR 676

[Close]

BLAST of CsaV3_2G036510 vs. NCBI nr
Match: XP_031736889.1 (H/ACA ribonucleoprotein complex non-core subunit NAF1 isoform X1 [Cucumis sativus])

HSP 1 Score: 1219.1 bits (3153), Expect = 0.0e+00
Identity = 634/634 (100.00%), Postives = 634/634 (100.00%), Query Frame = 0


Query: 1   MKTSGEACSNSTDFNSITEEGMPKVTLVLDGEACSNSTDFNSIIEEGMSKVSLVLDGGCI 60
           MKTSGEACSNSTDFNSITEEGMPKVTLVLDGEACSNSTDFNSIIEEGMSKVSLVLDGGCI
Sbjct: 106 MKTSGEACSNSTDFNSITEEGMPKVTLVLDGEACSNSTDFNSIIEEGMSKVSLVLDGGCI 165

Query: 61  SKVELESEADDGEGDVESEGTSSASTSSSSSSGGSSDNEVDEEEEDSSSSTSAGCDDEEE 120
           SKVELESEADDGEGDVESEGTSSASTSSSSSSGGSSDNEVDEEEEDSSSSTSAGCDDEEE
Sbjct: 166 SKVELESEADDGEGDVESEGTSSASTSSSSSSGGSSDNEVDEEEEDSSSSTSAGCDDEEE 225

Query: 121 KENIVEAEGKREIGELEEGEIRDADDEDEEAFADDMVAWDNDGEDLKEDDEDLDGEEEEA 180
           KENIVEAEGKREIGELEEGEIRDADDEDEEAFADDMVAWDNDGEDLKEDDEDLDGEEEEA
Sbjct: 226 KENIVEAEGKREIGELEEGEIRDADDEDEEAFADDMVAWDNDGEDLKEDDEDLDGEEEEA 285

Query: 181 GAEGGPITSKNELKVLPPVPQVHATLQPHHQMLPVGVVLSMLGNQVIVEGVEKHNPLSEG 240
           GAEGGPITSKNELKVLPPVPQVHATLQPHHQMLPVGVVLSMLGNQVIVEGVEKHNPLSEG
Sbjct: 286 GAEGGPITSKNELKVLPPVPQVHATLQPHHQMLPVGVVLSMLGNQVIVEGVEKHNPLSEG 345

Query: 241 SILWITEARSPLGLVDEIFGPVKNPYYSVRYNSESEVPLGISGGTHVSFVLEFADYVLNN 300
           SILWITEARSPLGLVDEIFGPVKNPYYSVRYNSESEVPLGISGGTHVSFVLEFADYVLNN
Sbjct: 346 SILWITEARSPLGLVDEIFGPVKNPYYSVRYNSESEVPLGISGGTHVSFVLEFADYVLNN 405

Query: 301 KDLYKKGYDASGVNDEEVSDDGEFSDDEKELEFKKMQRLAKRAMNDNQQINANKNNGRKK 360
           KDLYKKGYDASGVNDEEVSDDGEFSDDEKELEFKKMQRLAKRAMNDNQQINANKNNGRKK
Sbjct: 406 KDLYKKGYDASGVNDEEVSDDGEFSDDEKELEFKKMQRLAKRAMNDNQQINANKNNGRKK 465

Query: 361 KNNAKARKFGERTFENANVPDEPKKFYGQCTPEQAKISEGRKFDHPTPHQAKMDMVRPSP 420
           KNNAKARKFGERTFENANVPDEPKKFYGQCTPEQAKISEGRKFDHPTPHQAKMDMVRPSP
Sbjct: 466 KNNAKARKFGERTFENANVPDEPKKFYGQCTPEQAKISEGRKFDHPTPHQAKMDMVRPSP 525

Query: 421 NQNQQTGPPLAPFVYHGGCPNPSVAEQCFMNGTGIMSSFPPTYNPCFTPAMNGIRPAEMP 480
           NQNQQTGPPLAPFVYHGGCPNPSVAEQCFMNGTGIMSSFPPTYNPCFTPAMNGIRPAEMP
Sbjct: 526 NQNQQTGPPLAPFVYHGGCPNPSVAEQCFMNGTGIMSSFPPTYNPCFTPAMNGIRPAEMP 585

Query: 481 FQFQQQQNPFFPNGLPMNGMPWLLQNPAQQMPQMPQMPQMPQMPQMPQMPMLNTFAGAAY 540
           FQFQQQQNPFFPNGLPMNGMPWLLQNPAQQMPQMPQMPQMPQMPQMPQMPMLNTFAGAAY
Sbjct: 586 FQFQQQQNPFFPNGLPMNGMPWLLQNPAQQMPQMPQMPQMPQMPQMPQMPMLNTFAGAAY 645

Query: 541 PQGFVGPSSALPNSSTAVGAQGIHSGGLQFGQNQNNLQPAAQQFNPPNSHPPGTFSGNVA 600
           PQGFVGPSSALPNSSTAVGAQGIHSGGLQFGQNQNNLQPAAQQFNPPNSHPPGTFSGNVA
Sbjct: 646 PQGFVGPSSALPNSSTAVGAQGIHSGGLQFGQNQNNLQPAAQQFNPPNSHPPGTFSGNVA 705

Query: 601 PQQFNQNSSSKQGRKSHGRGGNHFRGRRGGRQSR 635
           PQQFNQNSSSKQGRKSHGRGGNHFRGRRGGRQSR
Sbjct: 706 PQQFNQNSSSKQGRKSHGRGGNHFRGRRGGRQSR 739

[Close]

BLAST of CsaV3_2G036510 vs. NCBI nr
Match: XP_031736891.1 (H/ACA ribonucleoprotein complex non-core subunit NAF1 isoform X3 [Cucumis sativus] >KAE8652363.1 hypothetical protein Csa_022379 [Cucumis sativus])

HSP 1 Score: 1219.1 bits (3153), Expect = 0.0e+00
Identity = 634/634 (100.00%), Postives = 634/634 (100.00%), Query Frame = 0


Query: 1   MKTSGEACSNSTDFNSITEEGMPKVTLVLDGEACSNSTDFNSIIEEGMSKVSLVLDGGCI 60
           MKTSGEACSNSTDFNSITEEGMPKVTLVLDGEACSNSTDFNSIIEEGMSKVSLVLDGGCI
Sbjct: 1   MKTSGEACSNSTDFNSITEEGMPKVTLVLDGEACSNSTDFNSIIEEGMSKVSLVLDGGCI 60

Query: 61  SKVELESEADDGEGDVESEGTSSASTSSSSSSGGSSDNEVDEEEEDSSSSTSAGCDDEEE 120
           SKVELESEADDGEGDVESEGTSSASTSSSSSSGGSSDNEVDEEEEDSSSSTSAGCDDEEE
Sbjct: 61  SKVELESEADDGEGDVESEGTSSASTSSSSSSGGSSDNEVDEEEEDSSSSTSAGCDDEEE 120

Query: 121 KENIVEAEGKREIGELEEGEIRDADDEDEEAFADDMVAWDNDGEDLKEDDEDLDGEEEEA 180
           KENIVEAEGKREIGELEEGEIRDADDEDEEAFADDMVAWDNDGEDLKEDDEDLDGEEEEA
Sbjct: 121 KENIVEAEGKREIGELEEGEIRDADDEDEEAFADDMVAWDNDGEDLKEDDEDLDGEEEEA 180

Query: 181 GAEGGPITSKNELKVLPPVPQVHATLQPHHQMLPVGVVLSMLGNQVIVEGVEKHNPLSEG 240
           GAEGGPITSKNELKVLPPVPQVHATLQPHHQMLPVGVVLSMLGNQVIVEGVEKHNPLSEG
Sbjct: 181 GAEGGPITSKNELKVLPPVPQVHATLQPHHQMLPVGVVLSMLGNQVIVEGVEKHNPLSEG 240

Query: 241 SILWITEARSPLGLVDEIFGPVKNPYYSVRYNSESEVPLGISGGTHVSFVLEFADYVLNN 300
           SILWITEARSPLGLVDEIFGPVKNPYYSVRYNSESEVPLGISGGTHVSFVLEFADYVLNN
Sbjct: 241 SILWITEARSPLGLVDEIFGPVKNPYYSVRYNSESEVPLGISGGTHVSFVLEFADYVLNN 300

Query: 301 KDLYKKGYDASGVNDEEVSDDGEFSDDEKELEFKKMQRLAKRAMNDNQQINANKNNGRKK 360
           KDLYKKGYDASGVNDEEVSDDGEFSDDEKELEFKKMQRLAKRAMNDNQQINANKNNGRKK
Sbjct: 301 KDLYKKGYDASGVNDEEVSDDGEFSDDEKELEFKKMQRLAKRAMNDNQQINANKNNGRKK 360

Query: 361 KNNAKARKFGERTFENANVPDEPKKFYGQCTPEQAKISEGRKFDHPTPHQAKMDMVRPSP 420
           KNNAKARKFGERTFENANVPDEPKKFYGQCTPEQAKISEGRKFDHPTPHQAKMDMVRPSP
Sbjct: 361 KNNAKARKFGERTFENANVPDEPKKFYGQCTPEQAKISEGRKFDHPTPHQAKMDMVRPSP 420

Query: 421 NQNQQTGPPLAPFVYHGGCPNPSVAEQCFMNGTGIMSSFPPTYNPCFTPAMNGIRPAEMP 480
           NQNQQTGPPLAPFVYHGGCPNPSVAEQCFMNGTGIMSSFPPTYNPCFTPAMNGIRPAEMP
Sbjct: 421 NQNQQTGPPLAPFVYHGGCPNPSVAEQCFMNGTGIMSSFPPTYNPCFTPAMNGIRPAEMP 480

Query: 481 FQFQQQQNPFFPNGLPMNGMPWLLQNPAQQMPQMPQMPQMPQMPQMPQMPMLNTFAGAAY 540
           FQFQQQQNPFFPNGLPMNGMPWLLQNPAQQMPQMPQMPQMPQMPQMPQMPMLNTFAGAAY
Sbjct: 481 FQFQQQQNPFFPNGLPMNGMPWLLQNPAQQMPQMPQMPQMPQMPQMPQMPMLNTFAGAAY 540

Query: 541 PQGFVGPSSALPNSSTAVGAQGIHSGGLQFGQNQNNLQPAAQQFNPPNSHPPGTFSGNVA 600
           PQGFVGPSSALPNSSTAVGAQGIHSGGLQFGQNQNNLQPAAQQFNPPNSHPPGTFSGNVA
Sbjct: 541 PQGFVGPSSALPNSSTAVGAQGIHSGGLQFGQNQNNLQPAAQQFNPPNSHPPGTFSGNVA 600

Query: 601 PQQFNQNSSSKQGRKSHGRGGNHFRGRRGGRQSR 635
           PQQFNQNSSSKQGRKSHGRGGNHFRGRRGGRQSR
Sbjct: 601 PQQFNQNSSSKQGRKSHGRGGNHFRGRRGGRQSR 634

[Close]

BLAST of CsaV3_2G036510 vs. NCBI nr
Match: XP_016902388.1 (PREDICTED: H/ACA ribonucleoprotein complex non-core subunit NAF1-like isoform X1 [Cucumis melo] >TYK11128.1 H/ACA ribonucleoprotein complex non-core subunit NAF1-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 1021.5 bits (2640), Expect = 3.0e-294
Identity = 548/611 (89.69%), Postives = 560/611 (91.65%), Query Frame = 0


Query: 24  KVTLVLDGEACSNSTDFNSIIEEGMSKVSLVLDGGCISKVELESEADDGEGDVESEGTSS 83
           K+ +   GEAC+NSTD NSIIEEGMSKVSLVLDGGC SKVELESEADDGE DVESEGTSS
Sbjct: 103 KIEMQASGEACNNSTDLNSIIEEGMSKVSLVLDGGCTSKVELESEADDGENDVESEGTSS 162

Query: 84  ASTSSSSSSGGSSDNEVDEEEEDSSSSTSAGCDDEEEKENIVEAEGKREIGELEEGEIRD 143
            STSSSSSSGGSSDNEVDEEEE+SSSS+S+  DDEEE E IVEAEGKREIGELEEGEIRD
Sbjct: 163 ISTSSSSSSGGSSDNEVDEEEENSSSSSSSDYDDEEE-EYIVEAEGKREIGELEEGEIRD 222

Query: 144 ADDEDEEAFADDMVAWDNDGEDLKEDDEDLDGEEEEAGAEGGPITSKNELKVLPPVPQVH 203
           AD EDEEA ADDMVAWDNDGEDL  DDEDLDGEEEEA AEGGPITSKNELKVLPPVPQVH
Sbjct: 223 ADGEDEEASADDMVAWDNDGEDLDGDDEDLDGEEEEARAEGGPITSKNELKVLPPVPQVH 282

Query: 204 ATLQPHHQMLPVGVVLSMLGNQVIVEGVEKHNPLSEGSILWITEARSPLGLVDEIFGPVK 263
           ATLQPHHQMLPVGVVLSMLGNQVIVEGVEKHNPLSEGSILWITEARSPLGLVDEIFGPVK
Sbjct: 283 ATLQPHHQMLPVGVVLSMLGNQVIVEGVEKHNPLSEGSILWITEARSPLGLVDEIFGPVK 342

Query: 264 NPYYSVRYNSESEVPLGISGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVSDDGE 323
           NPYYSVRYNSESEVPLGISGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVSDDGE
Sbjct: 343 NPYYSVRYNSESEVPLGISGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVSDDGE 402

Query: 324 FSDDEKELEFKKMQRLAKRAMNDNQQINANKNNGRKKKNNAKARKFGERTFENANVPDEP 383
           FSDDEKELEFK+MQRLAKRAMNDNQQIN NKNNGRKKKNNAKARKF + TFENANVPDE 
Sbjct: 403 FSDDEKELEFKEMQRLAKRAMNDNQQINGNKNNGRKKKNNAKARKFVQHTFENANVPDES 462

Query: 384 KKFYGQCTPEQAKISEGRKFDHPTPHQAKMDMVRPSPNQNQQTGPPLAPFVYHGGCPNPS 443
           KKFYGQ TPEQA I EGRKFDHPTP QAKMDMV+PSPNQNQQTGPPLAPFVY GGCP+ S
Sbjct: 463 KKFYGQRTPEQATIFEGRKFDHPTPQQAKMDMVQPSPNQNQQTGPPLAPFVYQGGCPDLS 522

Query: 444 VAEQCFMNGTGIMSSFPPTYNPCFTPAMNGIRPAEMPFQFQQQQNPFFPNGLPMNGMPWL 503
           VAEQCFMN TG+MSSFPPTYNP FTPAMNGIRPAEMPFQF QQQNPFFPNGLPMNGMPWL
Sbjct: 523 VAEQCFMNETGVMSSFPPTYNPYFTPAMNGIRPAEMPFQFPQQQNPFFPNGLPMNGMPWL 582

Query: 504 LQNPAQQMPQMPQMPQMPQMPQMPQMPMLNTFAGAAYPQGFVGPSSALPNSSTAVGAQGI 563
           LQNPAQ               QMPQMPMLNTF GAAYPQGFVG SSALPNS T VGAQGI
Sbjct: 583 LQNPAQ---------------QMPQMPMLNTFVGAAYPQGFVGSSSALPNSLTTVGAQGI 642

Query: 564 HSGGLQFGQNQNNLQPAAQQFNPPNSHPPGTFSGNVAPQQFNQNSSSKQGRKSHGRGGNH 623
           HSGGLQFGQNQNNLQPAAQQFNPPNSHPPGTFSGN APQQFNQNSSSKQGRKSHGRGG H
Sbjct: 643 HSGGLQFGQNQNNLQPAAQQFNPPNSHPPGTFSGNRAPQQFNQNSSSKQGRKSHGRGGPH 697

Query: 624 FRGRRGGRQSR 635
           FRGRRGG+QSR
Sbjct: 703 FRGRRGGQQSR 697

[Close]

BLAST of CsaV3_2G036510 vs. NCBI nr
Match: XP_008459182.1 (PREDICTED: H/ACA ribonucleoprotein complex non-core subunit NAF1-like isoform X2 [Cucumis melo])

HSP 1 Score: 1019.2 bits (2634), Expect = 1.5e-293
Identity = 547/604 (90.56%), Postives = 557/604 (92.22%), Query Frame = 0


Query: 31  GEACSNSTDFNSIIEEGMSKVSLVLDGGCISKVELESEADDGEGDVESEGTSSASTSSSS 90
           GEAC+NSTD NSIIEEGMSKVSLVLDGGC SKVELESEADDGE DVESEGTSS STSSSS
Sbjct: 5   GEACNNSTDLNSIIEEGMSKVSLVLDGGCTSKVELESEADDGENDVESEGTSSISTSSSS 64

Query: 91  SSGGSSDNEVDEEEEDSSSSTSAGCDDEEEKENIVEAEGKREIGELEEGEIRDADDEDEE 150
           SSGGSSDNEVDEEEE+SSSS+S+  DDEEE E IVEAEGKREIGELEEGEIRDAD EDEE
Sbjct: 65  SSGGSSDNEVDEEEENSSSSSSSDYDDEEE-EYIVEAEGKREIGELEEGEIRDADGEDEE 124

Query: 151 AFADDMVAWDNDGEDLKEDDEDLDGEEEEAGAEGGPITSKNELKVLPPVPQVHATLQPHH 210
           A ADDMVAWDNDGEDL  DDEDLDGEEEEA AEGGPITSKNELKVLPPVPQVHATLQPHH
Sbjct: 125 ASADDMVAWDNDGEDLDGDDEDLDGEEEEARAEGGPITSKNELKVLPPVPQVHATLQPHH 184

Query: 211 QMLPVGVVLSMLGNQVIVEGVEKHNPLSEGSILWITEARSPLGLVDEIFGPVKNPYYSVR 270
           QMLPVGVVLSMLGNQVIVEGVEKHNPLSEGSILWITEARSPLGLVDEIFGPVKNPYYSVR
Sbjct: 185 QMLPVGVVLSMLGNQVIVEGVEKHNPLSEGSILWITEARSPLGLVDEIFGPVKNPYYSVR 244

Query: 271 YNSESEVPLGISGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVSDDGEFSDDEKE 330
           YNSESEVPLGISGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVSDDGEFSDDEKE
Sbjct: 245 YNSESEVPLGISGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVSDDGEFSDDEKE 304

Query: 331 LEFKKMQRLAKRAMNDNQQINANKNNGRKKKNNAKARKFGERTFENANVPDEPKKFYGQC 390
           LEFK+MQRLAKRAMNDNQQIN NKNNGRKKKNNAKARKF + TFENANVPDE KKFYGQ 
Sbjct: 305 LEFKEMQRLAKRAMNDNQQINGNKNNGRKKKNNAKARKFVQHTFENANVPDESKKFYGQR 364

Query: 391 TPEQAKISEGRKFDHPTPHQAKMDMVRPSPNQNQQTGPPLAPFVYHGGCPNPSVAEQCFM 450
           TPEQA I EGRKFDHPTP QAKMDMV+PSPNQNQQTGPPLAPFVY GGCP+ SVAEQCFM
Sbjct: 365 TPEQATIFEGRKFDHPTPQQAKMDMVQPSPNQNQQTGPPLAPFVYQGGCPDLSVAEQCFM 424

Query: 451 NGTGIMSSFPPTYNPCFTPAMNGIRPAEMPFQFQQQQNPFFPNGLPMNGMPWLLQNPAQQ 510
           N TG+MSSFPPTYNP FTPAMNGIRPAEMPFQF QQQNPFFPNGLPMNGMPWLLQNPAQ 
Sbjct: 425 NETGVMSSFPPTYNPYFTPAMNGIRPAEMPFQFPQQQNPFFPNGLPMNGMPWLLQNPAQ- 484

Query: 511 MPQMPQMPQMPQMPQMPQMPMLNTFAGAAYPQGFVGPSSALPNSSTAVGAQGIHSGGLQF 570
                         QMPQMPMLNTF GAAYPQGFVG SSALPNS T VGAQGIHSGGLQF
Sbjct: 485 --------------QMPQMPMLNTFVGAAYPQGFVGSSSALPNSLTTVGAQGIHSGGLQF 544

Query: 571 GQNQNNLQPAAQQFNPPNSHPPGTFSGNVAPQQFNQNSSSKQGRKSHGRGGNHFRGRRGG 630
           GQNQNNLQPAAQQFNPPNSHPPGTFSGN APQQFNQNSSSKQGRKSHGRGG HFRGRRGG
Sbjct: 545 GQNQNNLQPAAQQFNPPNSHPPGTFSGNRAPQQFNQNSSSKQGRKSHGRGGPHFRGRRGG 592

Query: 631 RQSR 635
           +QSR
Sbjct: 605 QQSR 592

[Close]

BLAST of CsaV3_2G036510 vs. ExPASy Swiss-Prot
Match: P53919 (H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=NAF1 PE=1 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 2.1e-11
Identity = 121/449 (26.95%), Postives = 194/449 (43.21%), Query Frame = 0


Query: 94  GSSDNEVDEEEEDSSSSTSAGCDDEEEKENIVEAEGKREIGELEEGEIRDADDEDEEAFA 153
           G ++ + DE   D+  ST  G            +E + + G   + +   +  ED+ A  
Sbjct: 34  GGNERKTDEPVADAERSTGLGSG---------SSESESDSGSDSDSDSGSSGSEDDSA-D 93

Query: 154 DDMVAWDNDGEDLKEDDEDLDGEEEEAGAEGGPITSKNEL--KVLPPVPQVHATLQPHHQ 213
            D+   D  G+ ++ +DED      E  +  GPI SKNE+  + +P +P+ +  +     
Sbjct: 94  QDVEGEDEGGDAIENEDED------EDPSPSGPILSKNEILEETVPELPEDY-EISEKTI 153

Query: 214 MLPVGVVLSMLGNQVIVEGV--EKHNPLSEGSILWITEARSPLGLVDEIFGPVKNPYYSV 273
           + P+GV+ S   N +I+      +   L EGSI  + E R+ +G++ E+FGP++NP+Y +
Sbjct: 154 ITPIGVLKSAFENNIIIHATMSGEKRVLKEGSIFCL-EDRTLIGMLTEVFGPLQNPFYRI 213

Query: 274 RYNSESE---VPLGISGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEV-SDDGEFS 333
           +     +     L +  G     V   A ++   +    KG DAS   DEE+  ++ EFS
Sbjct: 214 KLPDSKKNLFDELKVRLGEKAFIVTPDAHWIDTFELKRNKGTDASNGYDEELPEEEQEFS 273

Query: 334 DDEKELEFKKMQRLAK-RAMNDNQQINANKNNGR-KKKNNAKAR---KFGERTFENANVP 393
           DDEKE  FKKM++  + R   DN+++  + +N + K+    KA    K       ++N P
Sbjct: 274 DDEKEALFKKMKKQQRQRKKRDNRKLANDSDNVKVKRARQPKANSLPKLVPPLGMSSNAP 333

Query: 394 DE---PKKFYGQCTPEQAKISEGRKFDHPTP----HQAKMDMVR-PSPNQ-NQQTGPPLA 453
            +     +   +    ++  +  R    P P    HQ +      P P Q N    PP +
Sbjct: 334 MQHGYKSRNARENIKRESSATSNRNGSSPVPITQHHQQQFSANNYPFPQQPNGMPYPPYS 393

Query: 454 PFVYHGGCPNP----SVAEQCFMNGTGIMSSFPPTYNPCFTPAMNGIRPAEMPFQFQQQQ 513
           PF        P      A     + T    S PP YN       N   P +  F    Q 
Sbjct: 394 PFPQPTNFQYPPPPFGQATPAQFSNTVPYGSLPPAYN-------NMSPPTQQSFMPMTQS 453

[Close]

BLAST of CsaV3_2G036510 vs. ExPASy Swiss-Prot
Match: Q96HR8 (H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Homo sapiens OX=9606 GN=NAF1 PE=1 SV=2)

HSP 1 Score: 70.1 bits (170), Expect = 1.0e-10
Identity = 74/254 (29.13%), Postives = 124/254 (48.82%), Query Frame = 0


Query: 166 LKEDDEDLDGEEEEAGAEGGPITSKNELKV--LPPVPQVHATLQPHHQMLPVGVVLSMLG 225
           L + D+DL  E+E    +  P+ +K+EL +  LP V ++   L    ++ P+G+V S++ 
Sbjct: 153 LSDGDDDLQIEKEN---KNFPLKTKDELLLNELPSVEELTIILPEDIELKPLGMVSSIIE 212

Query: 226 NQVIVEGVEKHNPLSEGSILWITEARSPLGLVDEIFGPVKNPYYSVRYNSESEV-PLGIS 285
             VI+E +    P++E ++++ ++ R   G + EIFGPV +P+Y +R+NS   +   GI 
Sbjct: 213 QLVIIESMTNLPPVNEETVIFKSD-RQAAGKIFEIFGPVAHPFYVLRFNSSDHIESKGIK 272

Query: 286 GGTHVSF---VLEFADYVLNNKDLYKKGYDASGVNDEEVSDDG-EFSDDEKELEF----- 345
               + F   + +F  Y+   K    KG DAS  ND+E   +  +FSDDEKE E      
Sbjct: 273 IKETMYFAPSMKDFTQYIFTEKLKQDKGSDASWKNDQEPPPEALDFSDDEKEKEAKQRKK 332

Query: 346 ------KKMQRLAKRAMNDNQQINANKNNGRKKKNNAKARKFGE--RTFENANVPDEPKK 400
                 KK++        D  +++ N N       +AK  +  E  R F  A     P+ 
Sbjct: 333 SQIQGRKKLKSEFNEPGEDFTEVHQNWNAHSSASEHAKGYRNREFTRGFSRARY---PRS 392

[Close]

BLAST of CsaV3_2G036510 vs. ExPASy Swiss-Prot
Match: Q3UMQ8 (H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Mus musculus OX=10090 GN=Naf1 PE=1 SV=2)

HSP 1 Score: 68.9 bits (167), Expect = 2.3e-10
Identity = 83/287 (28.92%), Postives = 132/287 (45.99%), Query Frame = 0


Query: 166 LKEDDEDLDGEEEEAGAEGGPITSKNELKV--LPPVPQVHATLQPHHQMLPVGVVLSMLG 225
           L + DED   E+E    +  P+ +K+EL +  LP V ++   L     + P+G V S++ 
Sbjct: 146 LSDGDEDFQLEKEN---KNFPLKTKDELLLNELPSVEELTVILPEDIALKPLGKVSSIIE 205

Query: 226 NQVIVEGVEKHNPLSEGSILWITEARSPLGLVDEIFGPVKNPYYSVRYNSESEV-PLGIS 285
             VI+E V    P++E ++++ ++ R   G + EIFGPV +P+Y +R+NS   +   GI 
Sbjct: 206 QLVIIESVTNIPPVNEDTVIFKSD-RQAAGKIFEIFGPVAHPFYVLRFNSSDHIESKGIK 265

Query: 286 GGTHVSF---VLEFADYVLNNKDLYKKGYDASGVNDEEVSDDG-EFSDDEKELEFKKMQR 345
               + F   + +F  Y+   K    +G DAS  ND+E   +  +FSDDEKE E K+ ++
Sbjct: 266 INDTMYFAPSMKDFTQYIFTEKLKQDRGSDASWKNDQEPPPEVLDFSDDEKEKEAKQRKK 325

Query: 346 LAKRAMNDNQQINANKNNGRKKKNNAKARKFGERTFENANV--PDEPKKFY-------GQ 405
                     QI   K    K + N     FGE   EN N     E  K Y       G 
Sbjct: 326 ---------SQIQGRKK--LKSELNESGEDFGE-VHENWNAYSSSEHSKGYHHREFSRGF 385

Query: 406 CTPEQAKISEGR---KFDHPTPHQAKMDMVRPSPNQNQQTGPPLAPF 434
                ++ S GR   +  + + H A  + +  +P +      P  PF
Sbjct: 386 ARGRYSRRSHGRPPPQQYYNSDHMASQESLGFTPQRQDNPVMPHYPF 416

[Close]

BLAST of CsaV3_2G036510 vs. ExPASy Swiss-Prot
Match: A6ZRW0 (H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Saccharomyces cerevisiae (strain YJM789) OX=307796 GN=NAF1 PE=3 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 1.1e-09
Identity = 124/472 (26.27%), Postives = 202/472 (42.80%), Query Frame = 0


Query: 71  DGEGDVESEGTSSASTSSSSSSGGSSDNEVDEEEEDSSSSTSAGCDDEEEKENIVEAEGK 130
           DG  + +++  ++ +  S+    GSS++E D   +  S S S+G +D+   +++      
Sbjct: 33  DGGNERKTDEPAADAERSTGLGSGSSESESDSGSDSDSDSGSSGSEDDSADQDV------ 92

Query: 131 REIGELEEGEIRDADDEDEEAFADDMVAWDNDGEDLKEDDEDLDGEEEEAGAEGGPITSK 190
                  EGE                   D  G+ ++ +DED      E  +  GPI SK
Sbjct: 93  -------EGE-------------------DEGGDAIENEDED------EDPSPSGPILSK 152

Query: 191 NEL--KVLPPVPQVHATLQPHHQMLPVGVVLSMLGNQVIVEGV--EKHNPLSEGSILWIT 250
           NE+  + +P +P+ +  +     + P+GV+ S   N +I+      +   L EGSI  + 
Sbjct: 153 NEILEETVPELPEDY-EISEKTIITPIGVLKSAFENNIIIHATMSGEKRVLKEGSIFCL- 212

Query: 251 EARSPLGLVDEIFGPVKNPYYSVRYNSESE---VPLGISGGTHVSFVLEFADYVLNNKDL 310
           E R+ +G++ E+FGP++NP+Y ++     +     L +  G     V   A ++   +  
Sbjct: 213 EDRTLIGMLTEVFGPLQNPFYRIKLPDSKKNLFDELKVRLGEKAFIVTPDAHWIDTFELK 272

Query: 311 YKKGYDASGVNDEEV-SDDGEFSDDEKELEFKKMQR-LAKRAMNDNQQINANKNNGR-KK 370
             KG DAS   DEE+  ++ EFSDDEKE  FKKM++   +R   DN+++  + +N + K+
Sbjct: 273 RNKGTDASNGYDEELPEEEQEFSDDEKEALFKKMKKQQQQRKKRDNRKLANDSDNVKVKR 332

Query: 371 KNNAKAR---KFGERTFENANVPDE---PKKFYGQCTPEQAKISEGRKFDHPTP----HQ 430
               KA    K       ++N P +     +   +    ++  +  R    P P    HQ
Sbjct: 333 ARQPKANSLPKLVPPLGMSSNAPMQHGYKSRNARENIKRESSATSNRNGSSPVPITQLHQ 392

Query: 431 AKMDMVR-PSPNQ-NQQTGPPLAPFVYHGGCPNP----SVAEQCFMNGTGIMSSFPPTYN 490
            +      P P Q N    PP +PF        P      A     + T    S PP YN
Sbjct: 393 QQFSANNYPFPQQPNGMPYPPYSPFPQPTNFQYPPPPFGQATPAQFSNTVPYGSLPPAYN 452

Query: 491 PCFTPAMNGIRPAEMPFQFQQQQNPFFPNGL-PMNGM--PWLLQNPAQQMPQ 514
                  N   P +  F    Q  P  P G+ PMN M  P  +Q P Q  PQ
Sbjct: 453 -------NMSPPTQQSFMPMAQSQPPLPYGVPPMNQMQNPMYIQPPPQAPPQ 457

[Close]

BLAST of CsaV3_2G036510 vs. ExPASy Swiss-Prot
Match: Q52KK4 (H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Rattus norvegicus OX=10116 GN=Naf1 PE=1 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 1.3e-08
Identity = 87/314 (27.71%), Postives = 141/314 (44.90%), Query Frame = 0


Query: 135 ELEEGEIRDADDEDEEAFADDMVAWDNDGED----------LKEDDEDLDGEEEEAGAEG 194
           EL++ +  D+ D D E  +D   +  +              L + +ED+  E+E    + 
Sbjct: 78  ELQDSDSSDS-DSDSETDSDSSSSSSSSSSSSSSCGSLPPVLSDGEEDVQVEKEN---KN 137

Query: 195 GPITSKNELKV--LPPVPQVHATLQPHHQMLPVGVVLSMLGNQVIVEGVEKHNPLSEGSI 254
            P+ +K+EL +  LP V ++  TL     + P+G V S++   VI+E +    P++E ++
Sbjct: 138 FPLKTKDELLLNELPSVEELTVTLPEDIALKPLGKVSSIIEQLVIIESMTNIPPVNEDTV 197

Query: 255 LWITEARSPLGLVDEIFGPVKNPYYSVRYNSESEV-PLGISGGTHVSF---VLEFADYVL 314
           ++ ++ R   G + EIFGPV +P+Y +R+NS   +   GI     + F   + +F  Y+ 
Sbjct: 198 IFKSD-RQAAGKIFEIFGPVAHPFYVLRFNSSEHIESKGIKIKDTMYFAPSMKDFTQYIF 257

Query: 315 NNKDLYKKGYDASGVNDEEVSDDG-EFSDDEKELEFKKMQRLAKRAMNDNQQINANKNNG 374
             K    +G DAS  ND+E   +  +FSDDEKE E K+ ++          QI   K   
Sbjct: 258 TEKLKQDRGSDASWKNDQEPPPEALDFSDDEKEKEAKQRKK---------SQIQGRKK-- 317

Query: 375 RKKKNNAKARKFGE-RTFENANVPDEPKKFYGQCTPEQAKISEGRKFDH--PTPHQAKMD 429
            K + N     FGE     NAN   E  K Y             R+F    P    ++  
Sbjct: 318 LKSELNESGEDFGEVHQNWNANSSSEHSKGY-----------HNREFTRGFPRGRYSRGS 364

[Close]

BLAST of CsaV3_2G036510 vs. ExPASy TrEMBL
Match: A0A5D3CIV9 (H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold66G00340 PE=3 SV=1)

HSP 1 Score: 1021.5 bits (2640), Expect = 1.5e-294
Identity = 548/611 (89.69%), Postives = 560/611 (91.65%), Query Frame = 0


Query: 24  KVTLVLDGEACSNSTDFNSIIEEGMSKVSLVLDGGCISKVELESEADDGEGDVESEGTSS 83
           K+ +   GEAC+NSTD NSIIEEGMSKVSLVLDGGC SKVELESEADDGE DVESEGTSS
Sbjct: 103 KIEMQASGEACNNSTDLNSIIEEGMSKVSLVLDGGCTSKVELESEADDGENDVESEGTSS 162

Query: 84  ASTSSSSSSGGSSDNEVDEEEEDSSSSTSAGCDDEEEKENIVEAEGKREIGELEEGEIRD 143
            STSSSSSSGGSSDNEVDEEEE+SSSS+S+  DDEEE E IVEAEGKREIGELEEGEIRD
Sbjct: 163 ISTSSSSSSGGSSDNEVDEEEENSSSSSSSDYDDEEE-EYIVEAEGKREIGELEEGEIRD 222

Query: 144 ADDEDEEAFADDMVAWDNDGEDLKEDDEDLDGEEEEAGAEGGPITSKNELKVLPPVPQVH 203
           AD EDEEA ADDMVAWDNDGEDL  DDEDLDGEEEEA AEGGPITSKNELKVLPPVPQVH
Sbjct: 223 ADGEDEEASADDMVAWDNDGEDLDGDDEDLDGEEEEARAEGGPITSKNELKVLPPVPQVH 282

Query: 204 ATLQPHHQMLPVGVVLSMLGNQVIVEGVEKHNPLSEGSILWITEARSPLGLVDEIFGPVK 263
           ATLQPHHQMLPVGVVLSMLGNQVIVEGVEKHNPLSEGSILWITEARSPLGLVDEIFGPVK
Sbjct: 283 ATLQPHHQMLPVGVVLSMLGNQVIVEGVEKHNPLSEGSILWITEARSPLGLVDEIFGPVK 342

Query: 264 NPYYSVRYNSESEVPLGISGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVSDDGE 323
           NPYYSVRYNSESEVPLGISGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVSDDGE
Sbjct: 343 NPYYSVRYNSESEVPLGISGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVSDDGE 402

Query: 324 FSDDEKELEFKKMQRLAKRAMNDNQQINANKNNGRKKKNNAKARKFGERTFENANVPDEP 383
           FSDDEKELEFK+MQRLAKRAMNDNQQIN NKNNGRKKKNNAKARKF + TFENANVPDE 
Sbjct: 403 FSDDEKELEFKEMQRLAKRAMNDNQQINGNKNNGRKKKNNAKARKFVQHTFENANVPDES 462

Query: 384 KKFYGQCTPEQAKISEGRKFDHPTPHQAKMDMVRPSPNQNQQTGPPLAPFVYHGGCPNPS 443
           KKFYGQ TPEQA I EGRKFDHPTP QAKMDMV+PSPNQNQQTGPPLAPFVY GGCP+ S
Sbjct: 463 KKFYGQRTPEQATIFEGRKFDHPTPQQAKMDMVQPSPNQNQQTGPPLAPFVYQGGCPDLS 522

Query: 444 VAEQCFMNGTGIMSSFPPTYNPCFTPAMNGIRPAEMPFQFQQQQNPFFPNGLPMNGMPWL 503
           VAEQCFMN TG+MSSFPPTYNP FTPAMNGIRPAEMPFQF QQQNPFFPNGLPMNGMPWL
Sbjct: 523 VAEQCFMNETGVMSSFPPTYNPYFTPAMNGIRPAEMPFQFPQQQNPFFPNGLPMNGMPWL 582

Query: 504 LQNPAQQMPQMPQMPQMPQMPQMPQMPMLNTFAGAAYPQGFVGPSSALPNSSTAVGAQGI 563
           LQNPAQ               QMPQMPMLNTF GAAYPQGFVG SSALPNS T VGAQGI
Sbjct: 583 LQNPAQ---------------QMPQMPMLNTFVGAAYPQGFVGSSSALPNSLTTVGAQGI 642

Query: 564 HSGGLQFGQNQNNLQPAAQQFNPPNSHPPGTFSGNVAPQQFNQNSSSKQGRKSHGRGGNH 623
           HSGGLQFGQNQNNLQPAAQQFNPPNSHPPGTFSGN APQQFNQNSSSKQGRKSHGRGG H
Sbjct: 643 HSGGLQFGQNQNNLQPAAQQFNPPNSHPPGTFSGNRAPQQFNQNSSSKQGRKSHGRGGPH 697

Query: 624 FRGRRGGRQSR 635
           FRGRRGG+QSR
Sbjct: 703 FRGRRGGQQSR 697

[Close]

BLAST of CsaV3_2G036510 vs. ExPASy TrEMBL
Match: A0A1S4E2D7 (H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Cucumis melo OX=3656 GN=LOC103498379 PE=3 SV=1)

HSP 1 Score: 1021.5 bits (2640), Expect = 1.5e-294
Identity = 548/611 (89.69%), Postives = 560/611 (91.65%), Query Frame = 0


Query: 24  KVTLVLDGEACSNSTDFNSIIEEGMSKVSLVLDGGCISKVELESEADDGEGDVESEGTSS 83
           K+ +   GEAC+NSTD NSIIEEGMSKVSLVLDGGC SKVELESEADDGE DVESEGTSS
Sbjct: 103 KIEMQASGEACNNSTDLNSIIEEGMSKVSLVLDGGCTSKVELESEADDGENDVESEGTSS 162

Query: 84  ASTSSSSSSGGSSDNEVDEEEEDSSSSTSAGCDDEEEKENIVEAEGKREIGELEEGEIRD 143
            STSSSSSSGGSSDNEVDEEEE+SSSS+S+  DDEEE E IVEAEGKREIGELEEGEIRD
Sbjct: 163 ISTSSSSSSGGSSDNEVDEEEENSSSSSSSDYDDEEE-EYIVEAEGKREIGELEEGEIRD 222

Query: 144 ADDEDEEAFADDMVAWDNDGEDLKEDDEDLDGEEEEAGAEGGPITSKNELKVLPPVPQVH 203
           AD EDEEA ADDMVAWDNDGEDL  DDEDLDGEEEEA AEGGPITSKNELKVLPPVPQVH
Sbjct: 223 ADGEDEEASADDMVAWDNDGEDLDGDDEDLDGEEEEARAEGGPITSKNELKVLPPVPQVH 282

Query: 204 ATLQPHHQMLPVGVVLSMLGNQVIVEGVEKHNPLSEGSILWITEARSPLGLVDEIFGPVK 263
           ATLQPHHQMLPVGVVLSMLGNQVIVEGVEKHNPLSEGSILWITEARSPLGLVDEIFGPVK
Sbjct: 283 ATLQPHHQMLPVGVVLSMLGNQVIVEGVEKHNPLSEGSILWITEARSPLGLVDEIFGPVK 342

Query: 264 NPYYSVRYNSESEVPLGISGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVSDDGE 323
           NPYYSVRYNSESEVPLGISGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVSDDGE
Sbjct: 343 NPYYSVRYNSESEVPLGISGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVSDDGE 402

Query: 324 FSDDEKELEFKKMQRLAKRAMNDNQQINANKNNGRKKKNNAKARKFGERTFENANVPDEP 383
           FSDDEKELEFK+MQRLAKRAMNDNQQIN NKNNGRKKKNNAKARKF + TFENANVPDE 
Sbjct: 403 FSDDEKELEFKEMQRLAKRAMNDNQQINGNKNNGRKKKNNAKARKFVQHTFENANVPDES 462

Query: 384 KKFYGQCTPEQAKISEGRKFDHPTPHQAKMDMVRPSPNQNQQTGPPLAPFVYHGGCPNPS 443
           KKFYGQ TPEQA I EGRKFDHPTP QAKMDMV+PSPNQNQQTGPPLAPFVY GGCP+ S
Sbjct: 463 KKFYGQRTPEQATIFEGRKFDHPTPQQAKMDMVQPSPNQNQQTGPPLAPFVYQGGCPDLS 522

Query: 444 VAEQCFMNGTGIMSSFPPTYNPCFTPAMNGIRPAEMPFQFQQQQNPFFPNGLPMNGMPWL 503
           VAEQCFMN TG+MSSFPPTYNP FTPAMNGIRPAEMPFQF QQQNPFFPNGLPMNGMPWL
Sbjct: 523 VAEQCFMNETGVMSSFPPTYNPYFTPAMNGIRPAEMPFQFPQQQNPFFPNGLPMNGMPWL 582

Query: 504 LQNPAQQMPQMPQMPQMPQMPQMPQMPMLNTFAGAAYPQGFVGPSSALPNSSTAVGAQGI 563
           LQNPAQ               QMPQMPMLNTF GAAYPQGFVG SSALPNS T VGAQGI
Sbjct: 583 LQNPAQ---------------QMPQMPMLNTFVGAAYPQGFVGSSSALPNSLTTVGAQGI 642

Query: 564 HSGGLQFGQNQNNLQPAAQQFNPPNSHPPGTFSGNVAPQQFNQNSSSKQGRKSHGRGGNH 623
           HSGGLQFGQNQNNLQPAAQQFNPPNSHPPGTFSGN APQQFNQNSSSKQGRKSHGRGG H
Sbjct: 643 HSGGLQFGQNQNNLQPAAQQFNPPNSHPPGTFSGNRAPQQFNQNSSSKQGRKSHGRGGPH 697

Query: 624 FRGRRGGRQSR 635
           FRGRRGG+QSR
Sbjct: 703 FRGRRGGQQSR 697

[Close]

BLAST of CsaV3_2G036510 vs. ExPASy TrEMBL
Match: A0A1S3CAT3 (H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Cucumis melo OX=3656 GN=LOC103498379 PE=3 SV=1)

HSP 1 Score: 1019.2 bits (2634), Expect = 7.3e-294
Identity = 547/604 (90.56%), Postives = 557/604 (92.22%), Query Frame = 0


Query: 31  GEACSNSTDFNSIIEEGMSKVSLVLDGGCISKVELESEADDGEGDVESEGTSSASTSSSS 90
           GEAC+NSTD NSIIEEGMSKVSLVLDGGC SKVELESEADDGE DVESEGTSS STSSSS
Sbjct: 5   GEACNNSTDLNSIIEEGMSKVSLVLDGGCTSKVELESEADDGENDVESEGTSSISTSSSS 64

Query: 91  SSGGSSDNEVDEEEEDSSSSTSAGCDDEEEKENIVEAEGKREIGELEEGEIRDADDEDEE 150
           SSGGSSDNEVDEEEE+SSSS+S+  DDEEE E IVEAEGKREIGELEEGEIRDAD EDEE
Sbjct: 65  SSGGSSDNEVDEEEENSSSSSSSDYDDEEE-EYIVEAEGKREIGELEEGEIRDADGEDEE 124

Query: 151 AFADDMVAWDNDGEDLKEDDEDLDGEEEEAGAEGGPITSKNELKVLPPVPQVHATLQPHH 210
           A ADDMVAWDNDGEDL  DDEDLDGEEEEA AEGGPITSKNELKVLPPVPQVHATLQPHH
Sbjct: 125 ASADDMVAWDNDGEDLDGDDEDLDGEEEEARAEGGPITSKNELKVLPPVPQVHATLQPHH 184

Query: 211 QMLPVGVVLSMLGNQVIVEGVEKHNPLSEGSILWITEARSPLGLVDEIFGPVKNPYYSVR 270
           QMLPVGVVLSMLGNQVIVEGVEKHNPLSEGSILWITEARSPLGLVDEIFGPVKNPYYSVR
Sbjct: 185 QMLPVGVVLSMLGNQVIVEGVEKHNPLSEGSILWITEARSPLGLVDEIFGPVKNPYYSVR 244

Query: 271 YNSESEVPLGISGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVSDDGEFSDDEKE 330
           YNSESEVPLGISGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVSDDGEFSDDEKE
Sbjct: 245 YNSESEVPLGISGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVSDDGEFSDDEKE 304

Query: 331 LEFKKMQRLAKRAMNDNQQINANKNNGRKKKNNAKARKFGERTFENANVPDEPKKFYGQC 390
           LEFK+MQRLAKRAMNDNQQIN NKNNGRKKKNNAKARKF + TFENANVPDE KKFYGQ 
Sbjct: 305 LEFKEMQRLAKRAMNDNQQINGNKNNGRKKKNNAKARKFVQHTFENANVPDESKKFYGQR 364

Query: 391 TPEQAKISEGRKFDHPTPHQAKMDMVRPSPNQNQQTGPPLAPFVYHGGCPNPSVAEQCFM 450
           TPEQA I EGRKFDHPTP QAKMDMV+PSPNQNQQTGPPLAPFVY GGCP+ SVAEQCFM
Sbjct: 365 TPEQATIFEGRKFDHPTPQQAKMDMVQPSPNQNQQTGPPLAPFVYQGGCPDLSVAEQCFM 424

Query: 451 NGTGIMSSFPPTYNPCFTPAMNGIRPAEMPFQFQQQQNPFFPNGLPMNGMPWLLQNPAQQ 510
           N TG+MSSFPPTYNP FTPAMNGIRPAEMPFQF QQQNPFFPNGLPMNGMPWLLQNPAQ 
Sbjct: 425 NETGVMSSFPPTYNPYFTPAMNGIRPAEMPFQFPQQQNPFFPNGLPMNGMPWLLQNPAQ- 484

Query: 511 MPQMPQMPQMPQMPQMPQMPMLNTFAGAAYPQGFVGPSSALPNSSTAVGAQGIHSGGLQF 570
                         QMPQMPMLNTF GAAYPQGFVG SSALPNS T VGAQGIHSGGLQF
Sbjct: 485 --------------QMPQMPMLNTFVGAAYPQGFVGSSSALPNSLTTVGAQGIHSGGLQF 544

Query: 571 GQNQNNLQPAAQQFNPPNSHPPGTFSGNVAPQQFNQNSSSKQGRKSHGRGGNHFRGRRGG 630
           GQNQNNLQPAAQQFNPPNSHPPGTFSGN APQQFNQNSSSKQGRKSHGRGG HFRGRRGG
Sbjct: 545 GQNQNNLQPAAQQFNPPNSHPPGTFSGNRAPQQFNQNSSSKQGRKSHGRGGPHFRGRRGG 592

Query: 631 RQSR 635
           +QSR
Sbjct: 605 QQSR 592

[Close]

BLAST of CsaV3_2G036510 vs. ExPASy TrEMBL
Match: A0A5A7TE26 (H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold234G00720 PE=3 SV=1)

HSP 1 Score: 1014.2 bits (2621), Expect = 2.3e-292
Identity = 540/611 (88.38%), Postives = 556/611 (91.00%), Query Frame = 0


Query: 24  KVTLVLDGEACSNSTDFNSIIEEGMSKVSLVLDGGCISKVELESEADDGEGDVESEGTSS 83
           K+ +   GEACSNSTD NSIIEEGMSKVSLVLDGGC SKVELESE DDGE DVESEGTSS
Sbjct: 103 KIEMQASGEACSNSTDLNSIIEEGMSKVSLVLDGGCTSKVELESEVDDGESDVESEGTSS 162

Query: 84  ASTSSSSSSGGSSDNEVDEEEEDSSSSTSAGCDDEEEKENIVEAEGKREIGELEEGEIRD 143
            STSSSSSSGGSSDNEV+EEEE SSSS+S   DDEEE E IVEAEGKREIGELEEGEIRD
Sbjct: 163 VSTSSSSSSGGSSDNEVEEEEESSSSSSSGDYDDEEE-EYIVEAEGKREIGELEEGEIRD 222

Query: 144 ADDEDEEAFADDMVAWDNDGEDLKEDDEDLDGEEEEAGAEGGPITSKNELKVLPPVPQVH 203
           ADDEDEEA ADDMVAWDNDGEDL  DDEDLDGEEEEAGAEGGPITSKNELKVLPPVPQVH
Sbjct: 223 ADDEDEEASADDMVAWDNDGEDLDGDDEDLDGEEEEAGAEGGPITSKNELKVLPPVPQVH 282

Query: 204 ATLQPHHQMLPVGVVLSMLGNQVIVEGVEKHNPLSEGSILWITEARSPLGLVDEIFGPVK 263
           ATLQPHH+MLPVGVVLSMLGNQVIVEG+EKHNPLSEGSILWITEARSPLGLVDEIFGPVK
Sbjct: 283 ATLQPHHKMLPVGVVLSMLGNQVIVEGIEKHNPLSEGSILWITEARSPLGLVDEIFGPVK 342

Query: 264 NPYYSVRYNSESEVPLGISGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVSDDGE 323
           NPYYSVRYNSESEVPLGI GGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVSDDGE
Sbjct: 343 NPYYSVRYNSESEVPLGIRGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVSDDGE 402

Query: 324 FSDDEKELEFKKMQRLAKRAMNDNQQINANKNNGRKKKNNAKARKFGERTFENANVPDEP 383
           FSDDEKELEFKK+QRLAKRAMNDNQQINANKNNGRKKKNNAKA KFG+RTFENANVPDE 
Sbjct: 403 FSDDEKELEFKKLQRLAKRAMNDNQQINANKNNGRKKKNNAKAGKFGQRTFENANVPDES 462

Query: 384 KKFYGQCTPEQAKISEGRKFDHPTPHQAKMDMVRPSPNQNQQTGPPLAPFVYHGGCPNPS 443
           KKFYGQ TPEQA I EGR FD+P P QAKMDMV+PSPNQNQQTGP L PFVYHGGCPNPS
Sbjct: 463 KKFYGQRTPEQATIFEGRNFDYPIPQQAKMDMVQPSPNQNQQTGPHLPPFVYHGGCPNPS 522

Query: 444 VAEQCFMNGTGIMSSFPPTYNPCFTPAMNGIRPAEMPFQFQQQQNPFFPNGLPMNGMPWL 503
           VAE+CFMNGTG+MSSFPP YNP FTPAMNGIRP E+PFQFQQQQNPFFPNGLPMNGMPWL
Sbjct: 523 VAERCFMNGTGVMSSFPPAYNPYFTPAMNGIRPPEIPFQFQQQQNPFFPNGLPMNGMPWL 582

Query: 504 LQNPAQQMPQMPQMPQMPQMPQMPQMPMLNTFAGAAYPQGFVGPSSALPNSSTAVGAQGI 563
           LQNPAQ               QMPQMP+LNTFAGAAYPQGFVGP SALPNS T VGAQGI
Sbjct: 583 LQNPAQ---------------QMPQMPILNTFAGAAYPQGFVGPLSALPNSLTTVGAQGI 642

Query: 564 HSGGLQFGQNQNNLQPAAQQFNPPNSHPPGTFSGNVAPQQFNQNSSSKQGRKSHGRGGNH 623
           HSGGLQFGQNQNNLQPAAQQFNPPNSHPPGT SGN+APQQ NQNSSSKQGRKS GRGG H
Sbjct: 643 HSGGLQFGQNQNNLQPAAQQFNPPNSHPPGTLSGNIAPQQLNQNSSSKQGRKSRGRGGPH 697

Query: 624 FRGRRGGRQSR 635
           FRG RGG+QSR
Sbjct: 703 FRGSRGGQQSR 697

[Close]

BLAST of CsaV3_2G036510 vs. ExPASy TrEMBL
Match: A0A1S3CRN9 (H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Cucumis melo OX=3656 GN=LOC103503966 PE=3 SV=1)

HSP 1 Score: 1014.2 bits (2621), Expect = 2.3e-292
Identity = 540/611 (88.38%), Postives = 556/611 (91.00%), Query Frame = 0


Query: 24  KVTLVLDGEACSNSTDFNSIIEEGMSKVSLVLDGGCISKVELESEADDGEGDVESEGTSS 83
           K+ +   GEACSNSTD NSIIEEGMSKVSLVLDGGC SKVELESE DDGE DVESEGTSS
Sbjct: 103 KIEMQASGEACSNSTDLNSIIEEGMSKVSLVLDGGCTSKVELESEVDDGESDVESEGTSS 162

Query: 84  ASTSSSSSSGGSSDNEVDEEEEDSSSSTSAGCDDEEEKENIVEAEGKREIGELEEGEIRD 143
            STSSSSSSGGSSDNEV+EEEE SSSS+S   DDEEE E IVEAEGKREIGELEEGEIRD
Sbjct: 163 VSTSSSSSSGGSSDNEVEEEEESSSSSSSGDYDDEEE-EYIVEAEGKREIGELEEGEIRD 222

Query: 144 ADDEDEEAFADDMVAWDNDGEDLKEDDEDLDGEEEEAGAEGGPITSKNELKVLPPVPQVH 203
           ADDEDEEA ADDMVAWDNDGEDL  DDEDLDGEEEEAGAEGGPITSKNELKVLPPVPQVH
Sbjct: 223 ADDEDEEASADDMVAWDNDGEDLDGDDEDLDGEEEEAGAEGGPITSKNELKVLPPVPQVH 282

Query: 204 ATLQPHHQMLPVGVVLSMLGNQVIVEGVEKHNPLSEGSILWITEARSPLGLVDEIFGPVK 263
           ATLQPHH+MLPVGVVLSMLGNQVIVEG+EKHNPLSEGSILWITEARSPLGLVDEIFGPVK
Sbjct: 283 ATLQPHHKMLPVGVVLSMLGNQVIVEGIEKHNPLSEGSILWITEARSPLGLVDEIFGPVK 342

Query: 264 NPYYSVRYNSESEVPLGISGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVSDDGE 323
           NPYYSVRYNSESEVPLGI GGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVSDDGE
Sbjct: 343 NPYYSVRYNSESEVPLGIRGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVSDDGE 402

Query: 324 FSDDEKELEFKKMQRLAKRAMNDNQQINANKNNGRKKKNNAKARKFGERTFENANVPDEP 383
           FSDDEKELEFKK+QRLAKRAMNDNQQINANKNNGRKKKNNAKA KFG+RTFENANVPDE 
Sbjct: 403 FSDDEKELEFKKLQRLAKRAMNDNQQINANKNNGRKKKNNAKAGKFGQRTFENANVPDES 462

Query: 384 KKFYGQCTPEQAKISEGRKFDHPTPHQAKMDMVRPSPNQNQQTGPPLAPFVYHGGCPNPS 443
           KKFYGQ TPEQA I EGR FD+P P QAKMDMV+PSPNQNQQTGP L PFVYHGGCPNPS
Sbjct: 463 KKFYGQRTPEQATIFEGRNFDYPIPQQAKMDMVQPSPNQNQQTGPHLPPFVYHGGCPNPS 522

Query: 444 VAEQCFMNGTGIMSSFPPTYNPCFTPAMNGIRPAEMPFQFQQQQNPFFPNGLPMNGMPWL 503
           VAE+CFMNGTG+MSSFPP YNP FTPAMNGIRP E+PFQFQQQQNPFFPNGLPMNGMPWL
Sbjct: 523 VAERCFMNGTGVMSSFPPAYNPYFTPAMNGIRPPEIPFQFQQQQNPFFPNGLPMNGMPWL 582

Query: 504 LQNPAQQMPQMPQMPQMPQMPQMPQMPMLNTFAGAAYPQGFVGPSSALPNSSTAVGAQGI 563
           LQNPAQ               QMPQMP+LNTFAGAAYPQGFVGP SALPNS T VGAQGI
Sbjct: 583 LQNPAQ---------------QMPQMPILNTFAGAAYPQGFVGPLSALPNSLTTVGAQGI 642

Query: 564 HSGGLQFGQNQNNLQPAAQQFNPPNSHPPGTFSGNVAPQQFNQNSSSKQGRKSHGRGGNH 623
           HSGGLQFGQNQNNLQPAAQQFNPPNSHPPGT SGN+APQQ NQNSSSKQGRKS GRGG H
Sbjct: 643 HSGGLQFGQNQNNLQPAAQQFNPPNSHPPGTLSGNIAPQQLNQNSSSKQGRKSRGRGGPH 697

Query: 624 FRGRRGGRQSR 635
           FRG RGG+QSR
Sbjct: 703 FRGSRGGQQSR 697

[Close]

BLAST of CsaV3_2G036510 vs. TAIR 10
Match: AT1G03530.1 (nuclear assembly factor 1 )

HSP 1 Score: 257.7 bits (657), Expect = 2.5e-68
Identity = 250/662 (37.76%), Postives = 336/662 (50.76%), Query Frame = 0


Query: 17  ITEEGMPKVTLVLDGEACSNSTDFNSIIEEGMSKVSLVLDGGCISKVELESEADDGEGDV 76
           + E G+ K     +G ACS        IE G+ KVSL +D         + ++D+ +G++
Sbjct: 202 LDESGLKKTD---EGLACS--------IEVGLEKVSLAVDD--------DEKSDEAKGEM 261

Query: 77  ESEGTSSASTSSSSSSGGSSDNEVDEEEEDSSSSTSAGCDDEEEKENIVEAEGKREIGEL 136
           +S  + S ++SSS+SS  SS +E +E +ED S         EE+ E++V  +     GEL
Sbjct: 262 DSAESESETSSSSASSSDSSSSEEEESDEDESDKEEN--KKEEKFEHMVVGKEDDLAGEL 321

Query: 137 EEGEIRDADDEDEEAFADDMVAWDNDGEDLKEDDEDL-------DGEEEEAGAE-GGPIT 196
           EEGEI + D+E+ +   DD+   D+D +D  +DD+D+       + E+++ G +   PI 
Sbjct: 322 EEGEIENLDEENGD---DDIEDEDDDDDDDDDDDDDVNEMVAWSNDEDDDLGLQTKEPIR 381

Query: 197 SKNELKVLPPVPQVHATLQPHHQMLPVGVVLSMLGNQVIVEGVEKHNPLSEGSILWITEA 256
           SKNELK LPPVP V  TL+PHH  LPVGVVLS++  QVIVEG+EKH+PL+EGSILWITE 
Sbjct: 382 SKNELKELPPVPPVDVTLEPHHATLPVGVVLSVMSAQVIVEGMEKHSPLTEGSILWITEK 441

Query: 257 RSPLGLVDEIFGPVKNPYYSVRYNSESEVPLGISGGTHVSFVLEFADYVLNNKDLYKKGY 316
           R+PLGLVDEIFGPVK PYY VR+NSESEVP G+  GT VSFV +FA ++LN K+L KKGY
Sbjct: 442 RTPLGLVDEIFGPVKCPYYIVRFNSESEVPEGVCQGTPVSFVADFAQHILNIKELQKKGY 501

Query: 317 DASGVNDEEVSDDGEFSDDEKELEFKKMQRLAKRAMNDNQQINANKNNGRKKKNNAKARK 376
           DASG NDEE+ D+ EFSDDEKE E+++MQ+L KR M  +Q+    +N  +KKKN      
Sbjct: 502 DASGDNDEEIPDELEFSDDEKEAEYRRMQKLEKRGMMSDQKTGNTRN--KKKKNRD---- 561

Query: 377 FGERTFENANVPDEPKKFY-GQCTPEQ--AKISEGRKFDHPTPHQAKMDMVRPS-----P 436
                      P  P   Y G+ T  Q  + +S  R        + +MD   P+     P
Sbjct: 562 -----------PGRPTSSYSGEWTKNQGSSSLSSNRSDPQMGGPRPQMDGFPPNNAAWRP 621

Query: 437 NQNQQTGPPLAPFVYHGGCPNPSVAEQ----------------CFMNGTGIMSSFPPTYN 496
             NQQ    L P     G   P +A Q                    G G ++ FP   +
Sbjct: 622 QSNQQNPYQLPPIPNQMGMQIPFMAMQNQNQMMFQPQFNGGQMPMPGGPGGLNFFPGQAS 681

Query: 497 PCFTPAMNGIRPAEMPF----QFQQQQNP------FFPNGLPMNGMPWLLQNPAQQMPQM 556
             + PAM G       F      QQQ  P       F  GL M+     +  P  QM   
Sbjct: 682 APW-PAMVGQNCFNQQFGMGRGIQQQPLPNELSFNMFSQGLQMHPPQSQMHRPQSQMNPQ 741

Query: 557 PQMPQMPQMPQMPQMPMLNTFAGAAYPQGFVGPSSALPNSSTAVGAQGIHSGGLQFGQNQ 616
            QMP  PQ     Q PM   +     PQ    P   +                    Q Q
Sbjct: 742 FQMP--PQFQPHQQSPMNPQYQMMHRPQSPANPQFQM--------------------QAQ 795

Query: 617 NNLQPAAQQFNPPNSHPPGTFSGNVAPQQ--FNQNSSSKQGRKSHGRGGNHFRGRRGGRQ 635
           ++++P   Q   P S  P      + PQ   F+   SS++GR  HGRG    RGR G  +
Sbjct: 802 SDVRPLQSQI--PQS--PSDLQSPMEPQSQGFSSGQSSERGRGFHGRGRGRGRGRFGRGR 795

The following BLAST results are available for this feature:

BLAST of CsaV3_2G036510 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031736890.1	0.0e+00	100.00	H/ACA ribonucleoprotein complex non-core subunit NAF1 isoform X2 [Cucumis sativu...	[more]
XP_031736889.1	0.0e+00	100.00	H/ACA ribonucleoprotein complex non-core subunit NAF1 isoform X1 [Cucumis sativu...	[more]
XP_031736891.1	0.0e+00	100.00	H/ACA ribonucleoprotein complex non-core subunit NAF1 isoform X3 [Cucumis sativu...	[more]
XP_016902388.1	3.0e-294	89.69	PREDICTED: H/ACA ribonucleoprotein complex non-core subunit NAF1-like isoform X1...	[more]
XP_008459182.1	1.5e-293	90.56	PREDICTED: H/ACA ribonucleoprotein complex non-core subunit NAF1-like isoform X2...	[more]

BLAST of CsaV3_2G036510 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P53919	2.1e-11	26.95	H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Saccharomyces cerevisia...	[more]
Q96HR8	1.0e-10	29.13	H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Homo sapiens OX=9606 GN...	[more]
Q3UMQ8	2.3e-10	28.92	H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Mus musculus OX=10090 G...	[more]
A6ZRW0	1.1e-09	26.27	H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Saccharomyces cerevisia...	[more]
Q52KK4	1.3e-08	27.71	H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Rattus norvegicus OX=10...	[more]

BLAST of CsaV3_2G036510 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CIV9	1.5e-294	89.69	H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Cucumis melo var. makuw...	[more]
A0A1S4E2D7	1.5e-294	89.69	H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Cucumis melo OX=3656 GN...	[more]
A0A1S3CAT3	7.3e-294	90.56	H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Cucumis melo OX=3656 GN...	[more]
A0A5A7TE26	2.3e-292	88.38	H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Cucumis melo var. makuw...	[more]
A0A1S3CRN9	2.3e-292	88.38	H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Cucumis melo OX=3656 GN...	[more]

BLAST of CsaV3_2G036510 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G03530.1	2.5e-68	37.76	nuclear assembly factor 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 333..367
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 64..192
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 552..634
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 616..634
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 345..369
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 552..615
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 78..96
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 114..138
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 97..113
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 139..181
None	No IPR available	PANTHER	PTHR31633:SF1	H/ACA RIBONUCLEOPROTEIN COMPLEX NON-CORE SUBUNIT NAF1	coord: 5..626
IPR038664	H/ACA RNP complex subunit Gar1/Naf1, Cbf5-binding domain	GENE3D	2.40.10.230	Probable tRNA pseudouridine synthase domain	coord: 184..290 e-value: 2.2E-26 score: 94.1
IPR007504	H/ACA ribonucleoprotein complex, subunit Gar1/Naf1	PFAM	PF04410	Gar1	coord: 196..339 e-value: 1.2E-33 score: 116.1
IPR040309	H/ACA ribonucleoprotein complex non-core subunit Naf1	PANTHER	PTHR31633	H/ACA RIBONUCLEOPROTEIN COMPLEX NON-CORE SUBUNIT NAF1	coord: 5..626
IPR009000	Translation protein, beta-barrel domain superfamily	SUPERFAMILY	50447	Translation proteins	coord: 212..275

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_2G036510.1	CsaV3_2G036510.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000493	box H/ACA snoRNP assembly
biological_process	GO:0001522	pseudouridine synthesis
biological_process	GO:0042254	ribosome biogenesis
cellular_component	GO:0005732	sno(s)RNA-containing ribonucleoprotein complex
molecular_function	GO:0003723	RNA binding