CsaV3_2G036050 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAATCGTTGGAAATATGCATAATTATGATTTTGGCATCCTTCAGCACCTTCCTTCCCTTAAACAAATTACTTTAGTCGAGGATGAGTTGAGCAACAATAGTGTAACGCAAATTCCTCAACAACTCCAACACCTCACTGCCTTGGAATTTCTGTCCATTAAAAATTTTGGAGGCATTGAAGCTTTGCCAGAATGGTTAGGAAACTTTGTATGTTTGCAAACACTCGGTCTTTCTAATTGCAAAAAATTGAAAAAATTGCCTTCTACAGGAGCAATTCTACGTCTCACCAAATTAAAAAAATTGTATGCTTATAAATGTCCACAGCTACTACTTGACGAAG ATGGAAATCGTTGGAAATATGCATAATTATGATTTTGGCATCCTTCAGCACCTTCCTTCCCTTAAACAAATTACTTTAGTCGAGGATGAGTTGAGCAACAATAGTGTAACGCAAATTCCTCAACAACTCCAACACCTCACTGCCTTGGAATTTCTGTCCATTAAAAATTTTGGAGGCATTGAAGCTTTGCCAGAATGGTTAGGAAACTTTGTATGTTTGCAAACACTCGGTCTTTCTAATTGCAAAAAATTGAAAAAATTGCCTTCTACAGGAGCAATTCTACGTCTCACCAAATTAAAAAAATTGTATGCTTATAAATGTCCACAGCTACTACTTGACGAAG ATGGAAATCGTTGGAAATATGCATAATTATGATTTTGGCATCCTTCAGCACCTTCCTTCCCTTAAACAAATTACTTTAGTCGAGGATGAGTTGAGCAACAATAGTGTAACGCAAATTCCTCAACAACTCCAACACCTCACTGCCTTGGAATTTCTGTCCATTAAAAATTTTGGAGGCATTGAAGCTTTGCCAGAATGGTTAGGAAACTTTGTATGTTTGCAAACACTCGGTCTTTCTAATTGCAAAAAATTGAAAAAATTGCCTTCTACAGGAGCAATTCTACGTCTCACCAAATTAAAAAAATTGTATGCTTATAAATGTCCACAGCTACTACTTGACGAAG MEIVGNMHNYDFGILQHLPSLKQITLVEDELSNNSVTQIPQQLQHLTALEFLSIKNFGGIEALPEWLGNFVCLQTLGLSNCKKLKKLPSTGAILRLTKLKKLYAYKCPQLLLDEX Homology
BLAST of CsaV3_2G036050 vs. NCBI nr
Match: KAE8652340.1 (hypothetical protein Csa_022285, partial [Cucumis sativus]) HSP 1 Score: 232.3 bits (591), Expect = 2.2e-57 Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0
BLAST of CsaV3_2G036050 vs. NCBI nr
Match: AAT77098.1 (Fom-2 protein, partial [Cucumis melo]) HSP 1 Score: 196.1 bits (497), Expect = 1.7e-46 Identity = 98/112 (87.50%), Postives = 103/112 (91.96%), Query Frame = 0
BLAST of CsaV3_2G036050 vs. NCBI nr
Match: XP_011650071.2 (disease resistance protein RGA2 [Cucumis sativus] >KAE8652352.1 hypothetical protein Csa_021786 [Cucumis sativus]) HSP 1 Score: 194.9 bits (494), Expect = 3.8e-46 Identity = 97/114 (85.09%), Postives = 103/114 (90.35%), Query Frame = 0
BLAST of CsaV3_2G036050 vs. NCBI nr
Match: ABB91438.1 (R-FOM-2 [Cucumis melo]) HSP 1 Score: 190.3 bits (482), Expect = 9.4e-45 Identity = 94/114 (82.46%), Postives = 102/114 (89.47%), Query Frame = 0
BLAST of CsaV3_2G036050 vs. NCBI nr
Match: AAT77094.1 (Fom-2 protein, partial [Cucumis melo] >AAT77095.1 Fom-2 protein, partial [Cucumis melo] >AAT77096.1 Fom-2 protein, partial [Cucumis melo]) HSP 1 Score: 190.3 bits (482), Expect = 9.4e-45 Identity = 94/114 (82.46%), Postives = 102/114 (89.47%), Query Frame = 0
BLAST of CsaV3_2G036050 vs. ExPASy Swiss-Prot
Match: F4J339 (Probable disease resistance protein RPP1 OS=Arabidopsis thaliana OX=3702 GN=RPP1 PE=1 SV=1) HSP 1 Score: 48.1 bits (113), Expect = 7.6e-05 Identity = 34/99 (34.34%), Postives = 56/99 (56.57%), Query Frame = 0
BLAST of CsaV3_2G036050 vs. ExPASy Swiss-Prot
Match: Q9FI14 (Disease resistance protein TAO1 OS=Arabidopsis thaliana OX=3702 GN=TAO1 PE=3 SV=1) HSP 1 Score: 45.1 bits (105), Expect = 6.4e-04 Identity = 30/117 (25.64%), Postives = 55/117 (47.01%), Query Frame = 0
BLAST of CsaV3_2G036050 vs. ExPASy Swiss-Prot
Match: Q6UWE0 (E3 ubiquitin-protein ligase LRSAM1 OS=Homo sapiens OX=9606 GN=LRSAM1 PE=1 SV=1) HSP 1 Score: 44.7 bits (104), Expect = 8.4e-04 Identity = 26/66 (39.39%), Postives = 39/66 (59.09%), Query Frame = 0
BLAST of CsaV3_2G036050 vs. ExPASy Swiss-Prot
Match: Q9LVN2 (Probably inactive leucine-rich repeat receptor-like protein kinase At5g58150 OS=Arabidopsis thaliana OX=3702 GN=At5g58150 PE=2 SV=1) HSP 1 Score: 44.7 bits (104), Expect = 8.4e-04 Identity = 31/101 (30.69%), Postives = 52/101 (51.49%), Query Frame = 0
BLAST of CsaV3_2G036050 vs. ExPASy TrEMBL
Match: Q694W1 (Fom-2 protein (Fragment) OS=Cucumis melo OX=3656 GN=Fom-2 PE=4 SV=1) HSP 1 Score: 196.1 bits (497), Expect = 8.3e-47 Identity = 98/112 (87.50%), Postives = 103/112 (91.96%), Query Frame = 0
BLAST of CsaV3_2G036050 vs. ExPASy TrEMBL
Match: A0A0A0LRE1 (NB-ARC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G435460 PE=4 SV=1) HSP 1 Score: 194.9 bits (494), Expect = 1.9e-46 Identity = 97/114 (85.09%), Postives = 103/114 (90.35%), Query Frame = 0
BLAST of CsaV3_2G036050 vs. ExPASy TrEMBL
Match: Q694W4 (Fom-2 protein (Fragment) OS=Cucumis melo OX=3656 GN=Fom-2 PE=4 SV=1) HSP 1 Score: 190.3 bits (482), Expect = 4.6e-45 Identity = 94/114 (82.46%), Postives = 102/114 (89.47%), Query Frame = 0
BLAST of CsaV3_2G036050 vs. ExPASy TrEMBL
Match: A0A4Y6JLT3 (Fom-2 protein (Fragment) OS=Cucumis melo var. cantalupensis OX=3658 GN=Fom-2 PE=4 SV=1) HSP 1 Score: 190.3 bits (482), Expect = 4.6e-45 Identity = 94/114 (82.46%), Postives = 102/114 (89.47%), Query Frame = 0
BLAST of CsaV3_2G036050 vs. ExPASy TrEMBL
Match: Q2V727 (R-FOM-2 OS=Cucumis melo OX=3656 PE=4 SV=1) HSP 1 Score: 190.3 bits (482), Expect = 4.6e-45 Identity = 94/114 (82.46%), Postives = 102/114 (89.47%), Query Frame = 0
BLAST of CsaV3_2G036050 vs. TAIR 10
Match: AT5G17680.1 (disease resistance protein (TIR-NBS-LRR class), putative ) HSP 1 Score: 48.5 bits (114), Expect = 4.1e-06 Identity = 28/93 (30.11%), Postives = 48/93 (51.61%), Query Frame = 0
BLAST of CsaV3_2G036050 vs. TAIR 10
Match: AT3G44480.1 (Disease resistance protein (TIR-NBS-LRR class) family ) HSP 1 Score: 48.1 bits (113), Expect = 5.4e-06 Identity = 34/99 (34.34%), Postives = 56/99 (56.57%), Query Frame = 0
BLAST of CsaV3_2G036050 vs. TAIR 10
Match: AT1G69550.1 (disease resistance protein (TIR-NBS-LRR class) ) HSP 1 Score: 47.4 bits (111), Expect = 9.2e-06 Identity = 30/89 (33.71%), Postives = 50/89 (56.18%), Query Frame = 0
BLAST of CsaV3_2G036050 vs. TAIR 10
Match: AT3G04220.1 (Disease resistance protein (TIR-NBS-LRR class) family ) HSP 1 Score: 45.4 bits (106), Expect = 3.5e-05 Identity = 34/116 (29.31%), Postives = 51/116 (43.97%), Query Frame = 0
BLAST of CsaV3_2G036050 vs. TAIR 10
Match: AT5G44510.1 (target of AVRB operation1 ) HSP 1 Score: 45.1 bits (105), Expect = 4.6e-05 Identity = 30/117 (25.64%), Postives = 55/117 (47.01%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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