CsaV3_2G035730 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_2G035730
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr2: 23967113 .. 23967527 (+)
RNA-Seq ExpressionCsaV3_2G035730
SyntenyCsaV3_2G035730
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTTACCAACAGCCACAATCGCAAGCTCATTCTTACATTAGGGAATCACCTCTCGTTGATCTGGGATTTGCTCTTGCGAGTATCACGCTAGTTATGTGGGATATCAAACAACATCATGCCACATTCACATTCTTAGATCTGAGAGTTACATTCCACTAGCGTCTCTTCAATATCTTTGTCAAAGTGAGTGCTACAACGCCATATGCTGGAATCACTTCACGACAAGTCCATTCTGAGACCTGGGAATCTCCCCTCGCTTAGACTTGGGATTCTCTCTCATTCAGTATCAAGCAAGTTATCTGGGATATCCAACAACGTCTCTCCACATCTTTCTTACAGCTCCCCTCGATGTGAAAATTCTTCCCTTGCTGACTTGGGATTCGCTCTCGCCAGTATCACACGAGTTACTTGA

mRNA sequence

ATGAGTTACCAACAGCCACAATCGCAAGCTCATTCTTACATTAGGGAATCACCTCTCGTTGATCTGGGATTTGCTCTTGCGAGTATCACGCTAGTTATGTGGGATATCAAACAACATCATGCCACATTCACATTCTTAGATCTGAGATCCATTCTGAGACCTGGGAATCTCCCCTCGCTTAGACTTGGGATTCTCTCTCATTCAGTATCAAGCAAGTTATCTGGGATATCCAACAACGTCTCTCCACATCTTTCTTACAGCTCCCCTCGATGTGAAAATTCTTCCCTTGCTGACTTGGGATTCGCTCTCGCCAGTATCACACGAGTTACTTGA

Coding sequence (CDS)

ATGAGTTACCAACAGCCACAATCGCAAGCTCATTCTTACATTAGGGAATCACCTCTCGTTGATCTGGGATTTGCTCTTGCGAGTATCACGCTAGTTATGTGGGATATCAAACAACATCATGCCACATTCACATTCTTAGATCTGAGATCCATTCTGAGACCTGGGAATCTCCCCTCGCTTAGACTTGGGATTCTCTCTCATTCAGTATCAAGCAAGTTATCTGGGATATCCAACAACGTCTCTCCACATCTTTCTTACAGCTCCCCTCGATGTGAAAATTCTTCCCTTGCTGACTTGGGATTCGCTCTCGCCAGTATCACACGAGTTACTTGA

Protein sequence

MSYQQPQSQAHSYIRESPLVDLGFALASITLVMWDIKQHHATFTFLDLRSILRPGNLPSLRLGILSHSVSSKLSGISNNVSPHLSYSSPRCENSSLADLGFALASITRVT*
Homology
[Close]
BLAST of CsaV3_2G035730 vs. NCBI nr
Match: KGN63327.1 (hypothetical protein Csa_021848 [Cucumis sativus])

HSP 1 Score: 216.5 bits (550), Expect = 1.2e-52
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0 

Query: 1   MSYQQPQSQAHSYIRESPLVDLGFALASITLVMWDIKQHHATFTFLDLRSILRPGNLPSL 60
           MSYQQPQSQAHSYIRESPLVDLGFALASITLVMWDIKQHHATFTFLDLRSILRPGNLPSL
Sbjct: 1   MSYQQPQSQAHSYIRESPLVDLGFALASITLVMWDIKQHHATFTFLDLRSILRPGNLPSL 60

Query: 61  RLGILSHSVSSKLSGISNNVSPHLSYSSPRCENSSLADLGFALASITRVT 111
           RLGILSHSVSSKLSGISNNVSPHLSYSSPRCENSSLADLGFALASITRVT
Sbjct: 61  RLGILSHSVSSKLSGISNNVSPHLSYSSPRCENSSLADLGFALASITRVT 110

[Close]
BLAST of CsaV3_2G035730 vs. ExPASy TrEMBL
Match: A0A0A0LR83 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G429000 PE=4 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 5.7e-53
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0 

Query: 1   MSYQQPQSQAHSYIRESPLVDLGFALASITLVMWDIKQHHATFTFLDLRSILRPGNLPSL 60
           MSYQQPQSQAHSYIRESPLVDLGFALASITLVMWDIKQHHATFTFLDLRSILRPGNLPSL
Sbjct: 1   MSYQQPQSQAHSYIRESPLVDLGFALASITLVMWDIKQHHATFTFLDLRSILRPGNLPSL 60

Query: 61  RLGILSHSVSSKLSGISNNVSPHLSYSSPRCENSSLADLGFALASITRVT 111
           RLGILSHSVSSKLSGISNNVSPHLSYSSPRCENSSLADLGFALASITRVT
Sbjct: 61  RLGILSHSVSSKLSGISNNVSPHLSYSSPRCENSSLADLGFALASITRVT 110

The following BLAST results are available for this feature:
BLAST of CsaV3_2G035730 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN63327.11.2e-52100.00hypothetical protein Csa_021848 [Cucumis sativus][more]
BLAST of CsaV3_2G035730 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_2G035730 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LR835.7e-53100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G429000 PE=4 SV=1[more]
BLAST of CsaV3_2G035730 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_2G035730.1CsaV3_2G035730.1mRNA