CsaV3_2G034420 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_2G034420
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr2: 22807943 .. 22808199 (-)
RNA-Seq ExpressionCsaV3_2G034420
SyntenyCsaV3_2G034420
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACCATCGTTGGCCGACCACTAGGTGTCATTTCTGACAACTACGCTGACAAACTTTTGGCCATCAACTTCGACAACTACTCGTAAACCTTGAAAAATGAATTTTTAAAATATTCTTTTCCTACTCCATCCAAATACATCTTTGATTTAATAACAATAATATTTTTCTTAGGATGGTTCTAACCCTAGATCTCTCCGAAACCTCGAGCCAATATCCCTATATCGCTCCTCCCTCTCTTGCTAGCCCCATGGGTTAG

mRNA sequence

ATGACCATCGTTGGCCGACCACTAGGTGTCATTTCTGACAACTACGCTGACAAACTTTTGGCCATCAACTTCGACAACTACTCGATGGTTCTAACCCTAGATCTCTCCGAAACCTCGAGCCAATATCCCTATATCGCTCCTCCCTCTCTTGCTAGCCCCATGGGTTAG

Coding sequence (CDS)

ATGACCATCGTTGGCCGACCACTAGGTGTCATTTCTGACAACTACGCTGACAAACTTTTGGCCATCAACTTCGACAACTACTCGATGGTTCTAACCCTAGATCTCTCCGAAACCTCGAGCCAATATCCCTATATCGCTCCTCCCTCTCTTGCTAGCCCCATGGGTTAG

Protein sequence

MTIVGRPLGVISDNYADKLLAINFDNYSMVLTLDLSETSSQYPYIAPPSLASPMG*
Homology
[Close]
BLAST of CsaV3_2G034420 vs. NCBI nr
Match: KGN63198.1 (hypothetical protein Csa_022264 [Cucumis sativus])

HSP 1 Score: 112.1 bits (279), Expect = 1.6e-21
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0 

Query: 1  MTIVGRPLGVISDNYADKLLAINFDNYSMVLTLDLSETSSQYPYIAPPSLASPMG 56
          MTIVGRPLGVISDNYADKLLAINFDNYSMVLTLDLSETSSQYPYIAPPSLASPMG
Sbjct: 1  MTIVGRPLGVISDNYADKLLAINFDNYSMVLTLDLSETSSQYPYIAPPSLASPMG 55

[Close]
BLAST of CsaV3_2G034420 vs. ExPASy TrEMBL
Match: A0A0A0LN10 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G408930 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 7.7e-22
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0 

Query: 1  MTIVGRPLGVISDNYADKLLAINFDNYSMVLTLDLSETSSQYPYIAPPSLASPMG 56
          MTIVGRPLGVISDNYADKLLAINFDNYSMVLTLDLSETSSQYPYIAPPSLASPMG
Sbjct: 1  MTIVGRPLGVISDNYADKLLAINFDNYSMVLTLDLSETSSQYPYIAPPSLASPMG 55

The following BLAST results are available for this feature:
BLAST of CsaV3_2G034420 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN63198.11.6e-21100.00hypothetical protein Csa_022264 [Cucumis sativus][more]
BLAST of CsaV3_2G034420 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_2G034420 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LN107.7e-22100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G408930 PE=4 SV=1[more]
BLAST of CsaV3_2G034420 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_2G034420.1CsaV3_2G034420.1mRNA