CsaV3_2G033200 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_2G033200
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	protein PARTING DANCERS
Location	chr2: 22044666 .. 22047931 (+)
RNA-Seq Expression	CsaV3_2G033200
Synteny	CsaV3_2G033200

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAATTCTTCACAGAGAGATGCTGATCAAATGGTTGGAAATCAAGTGAAAGCTAAAAATGACGGTATATTGTTCTTAGCTATCTTATTTGTTTGAGTTTTGTGTTATTTTTTAGAAAGTCGAATATGTCTTGATCGGATGCAGATGCTGGGCTCATGAATTCATTTTACGTCAGAAGATCATTATAGTATTTCATAAATTAGAAATTAATTCTGAACTCTAATGGTTGCTTTAAGCACGGGGATGCGATATCGTTTGATAATCACACATAGGAAATATGCATTGCGGTGTCCGCATAAACGATTTTAGAGAAGCAAGCGTATTGCAAGTGAAAGTTAGTTCACTTTTTTCAATTGTCACTGTTGCTTGATCTTACTTCGCTTGTTTGTAGTTTCTGCAAATCCAATGATGCTAAACGAGGAAAATTATAGTTGTCTGTGCTGATTCTTTATGCGAGAAAAAAGATATTTCTTCTCCAGAATGTAAATTATCTGTGATTTAAAACTCCTTAGAAAAATTGTTAGGAAGCGTTTACGTTCTTGATGTAAATATTTTAAGCCCGAAAAGAAGAAACCATACAACTCTTATCGTCTTAACTCTTGATCCGAGTTGCATTATCACAAGAACACTCATGATTTAATGCATTTCTTTCATTAGACGTTAGACAATTTTCTGGAAATCGCATCACATAGCAAAATCTGTTTGAGTTTTCTATCCATTTTAGATCTTTGCTTTGCGTCCCACCTCTTCCTATTCCTTTTTCTATTTTCAAATTGACGAAATAATTTAAAAGAAGATCATCCTGATGATTAGGTAATTTGTATTATCTCATTAATGGTTGTATAAAAGTGGACTTGGTCTTATCATATCAAATCTCTCTATGCATTGCTTGCACGCAAAATGAATTTATACACGTAGAACATGTTAACCAAAATTCTTGCATGTACATGTTTTAAAAATCTGAGCAAGCTCTAGAATGGGCGTCATCTGTTTGTTTTGCAAATGCAGGTGGTGGGGTCTGTTTGATGAGCAATGTATGGAGAGATGAGCAGCATCCATCCTTCATAAATTTCATATCAAATTTCCTTTGCTCAAACTCATTTCGCCTCAATTTTGTTCCAATTGCCCCAGTAATTTTTTTTTCTTTCACTTTTTCTGTATGTAAATTTCATTGACACCTTCTTTACGGTGTACTCATACCAATCACTTGTCTTAGGACTTGATATTCAATTGTGGTGGTTTATCAGTGGCTTTTGCTTTCCTGACAAGTTGGGAGTGCAGTAATACGTCGTCAATCTTTAGCAGGTAGCTTTGTTGTTTATGGCTTTTCTTTTTTGCTGGTTTTCCCTTTAGTTTTGTTCGATTCAGTCCGATCTTGACAGAGTTCAAAAGTTGAAGAAGCAATTTGCAAATTTGTATGTTGTTGTTGTCCTTCCAACCAAGGAGCAAAATGATTCATTTGTTCAATCTTACTTCAGGTAATTAGAGTCTGGTATCTTGAATGATTCCCTGCTTTATCTTTAATATATCTTTTTTAGAGAACTTACGTTTCTTTCCTTCCCCCTAAATCTCGTGAAGAAATGGGATGGAGATTGGTAAGCCACCATTTGTAGCTGTTCAGGATATTGAGATGGGGTTTGAGAAGATTGTAAAGATAGCACACTCTCGCGGAGGTAGTAACCATTTTAATTTTGGGTTGAATACTTTCCTCAACCATCTTCAATAACTATATCAAATTGCAGCATGCAAGCAGCAAGATATCATATCAAAACTGAGGACTGAGGTCGGTGTAGATTATATTCTACTTGAATTAGTAAAGACAATTCAATATCTAGTGCTCATGTTTTTTTACATGAGTTTTAATCACGTCTCCCTCTTTGGGGATCTTGTTGAAGAGGAAGAGATCAGTACAAGTCATGGATGCTTTTCGAAGGGTCATGTCTTCTGTACCAGGCCTTGATGATCATGATGCAAATTCGGTAAGTTAACCGGCTCGCATTCTTCATTTTCTGCTTATTTGTTCCTATCACTAGACATAGGTTTAGTTGGAAAAAACAGGGAGTTTTCTTAGTGGGAGCTCACGCATCATAGTACAACTCTTCCCTCAATATATATATATGAGTCCGGGAGAAGAGAAAAAGATCAAACAGGTCAACTAAAAAGTAACCAACTACGTACGGATACACCAAGTAACAGGTATTCATGCATATTTTGAAAATTCAAACGTGTTTTTAAAACGAGGTAATAACCTTTTACGTCCATATACCAACAGAATGGGTATTATTTTAAACTTGTTTTTAGTTTATGGGTATTATTGAAAGTTCAAATAAAGTACCAATTTTCACAATGGTATATTTTAATCTTTTTTCAAGTTTAAGGATATTATTAATTTTTTAAAAAAATTAGAGATATTTGTTAGGATATTATTAATTTTTAAAAAAAATTAGAGATATTTTTTAAACAAAGTACAAAGTTCATGGATATTTTCATATTTTAGCCTTACTTGAAACGGGAGGACAATGATTTTTTCTTTTTCACATCCATTAGTATTTTGGTCAACTTACATGCATCTTGACTAATCTCACGTAATAATCTGTCTAACTCTAGAACATTTTGGTATCAAGAAGAAAAACTGTAGGATATTAAATCTTAGGTAGGTGAGCACCATGGAATTCATGACCCCTTAGCCCTTTGCCATTTGCCATCTTTTTATGTTTAGATTGTCACTAGGCTAATTCATGATGTTGGAAGGACAATGACTTAAAACAATGCCACTGTCAACCTGTTTGTTCTAAGTCACAACCATAAAATGACAAGTCTTAATTTTCATCCAACTTTCTAGCAGAATTTTCATAGAAGATTCAAAGGCTAGTTTTGCTTATGTGATAAATGATAATCATATTCGCCATAAGTTCAACTAGATCGTAGGAAAGGGCTAAGAGATGGAAAATGACAATCATATTTTCTATAAGGTCACTAGATTGTAGCAAAGGGCTAAGAGATGAAAATATCTGGTCTTTTTAGTCAAACACGTGATGGTGCCAAATAGGAGGAAATATGATTTTTTTTTTTGTGGATGTAAGCTTTTTTATTTGAACATCTCTACTATTCAGCTAAATCAAGCTATTGGTTCAATTGAGGCAATCGCCAAAGCATCGAAGGAGTACATTTTGGAGAACACAGATCTGTCAGTGGAGAAGGCAGAGAGAATTAGGAGCTTTTTCAGGGATCCAAAGTTGTACCTCAGTCCCAAAATAAATTGA

mRNA sequence

ATGGCGAATTCTTCACAGAGAGATGCTGATCAAATGGTTGGAAATCAAGTGAAAGCTAAAAATGACGGTGGTGGGGTCTGTTTGATGAGCAATGTATGGAGAGATGAGCAGCATCCATCCTTCATAAATTTCATATCAAATTTCCTTTGCTCAAACTCATTTCGCCTCAATTTTGTTCCAATTGCCCCAGACTTGATATTCAATTGTGGTGGTTTATCAGTGGCTTTTGCTTTCCTGACAAGTTGGGAGTGCAGTAATACGTCGTCAATCTTTAGCAGAGTTCAAAAGTTGAAGAAGCAATTTGCAAATTTGTATGTTGTTGTTGTCCTTCCAACCAAGGAGCAAAATGATTCATTTGTTCAATCTTACTTCAGAAATGGGATGGAGATTGGTAAGCCACCATTTGTAGCTGTTCAGGATATTGAGATGGGGTTTGAGAAGATTGTAAAGATAGCACACTCTCGCGGAGCATGCAAGCAGCAAGATATCATATCAAAACTGAGGACTGAGAGGAAGAGATCAGTACAAGTCATGGATGCTTTTCGAAGGGTCATGTCTTCTGTACCAGGCCTTGATGATCATGATGCAAATTCGCTAAATCAAGCTATTGGTTCAATTGAGGCAATCGCCAAAGCATCGAAGGAGTACATTTTGGAGAACACAGATCTGTCAGTGGAGAAGGCAGAGAGAATTAGGAGCTTTTTCAGGGATCCAAAGTTGTACCTCAGTCCCAAAATAAATTGA

Coding sequence (CDS)

ATGGCGAATTCTTCACAGAGAGATGCTGATCAAATGGTTGGAAATCAAGTGAAAGCTAAAAATGACGGTGGTGGGGTCTGTTTGATGAGCAATGTATGGAGAGATGAGCAGCATCCATCCTTCATAAATTTCATATCAAATTTCCTTTGCTCAAACTCATTTCGCCTCAATTTTGTTCCAATTGCCCCAGACTTGATATTCAATTGTGGTGGTTTATCAGTGGCTTTTGCTTTCCTGACAAGTTGGGAGTGCAGTAATACGTCGTCAATCTTTAGCAGAGTTCAAAAGTTGAAGAAGCAATTTGCAAATTTGTATGTTGTTGTTGTCCTTCCAACCAAGGAGCAAAATGATTCATTTGTTCAATCTTACTTCAGAAATGGGATGGAGATTGGTAAGCCACCATTTGTAGCTGTTCAGGATATTGAGATGGGGTTTGAGAAGATTGTAAAGATAGCACACTCTCGCGGAGCATGCAAGCAGCAAGATATCATATCAAAACTGAGGACTGAGAGGAAGAGATCAGTACAAGTCATGGATGCTTTTCGAAGGGTCATGTCTTCTGTACCAGGCCTTGATGATCATGATGCAAATTCGCTAAATCAAGCTATTGGTTCAATTGAGGCAATCGCCAAAGCATCGAAGGAGTACATTTTGGAGAACACAGATCTGTCAGTGGAGAAGGCAGAGAGAATTAGGAGCTTTTTCAGGGATCCAAAGTTGTACCTCAGTCCCAAAATAAATTGA

Protein sequence

MANSSQRDADQMVGNQVKAKNDGGGVCLMSNVWRDEQHPSFINFISNFLCSNSFRLNFVPIAPDLIFNCGGLSVAFAFLTSWECSNTSSIFSRVQKLKKQFANLYVVVVLPTKEQNDSFVQSYFRNGMEIGKPPFVAVQDIEMGFEKIVKIAHSRGACKQQDIISKLRTERKRSVQVMDAFRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENTDLSVEKAERIRSFFRDPKLYLSPKIN*

Homology

[Close]

BLAST of CsaV3_2G033200 vs. NCBI nr
Match: XP_004138826.1 (protein PARTING DANCERS isoform X3 [Cucumis sativus] >KGN63073.1 hypothetical protein Csa_022044 [Cucumis sativus])

HSP 1 Score: 491.5 bits (1264), Expect = 4.3e-135
Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 0


Query: 1   MANSSQRDADQMVGNQVKAKNDGGGVCLMSNVWRDEQHPSFINFISNFLCSNSFRLNFVP 60
           MANSSQRDADQMVGNQVKAKNDGGGVCLMSNVWRDEQHPSFINFISNFLCSNSFRLNFVP
Sbjct: 1   MANSSQRDADQMVGNQVKAKNDGGGVCLMSNVWRDEQHPSFINFISNFLCSNSFRLNFVP 60

Query: 61  IAPDLIFNCGGLSVAFAFLTSWECSNTSSIFSRVQKLKKQFANLYVVVVLPTKEQNDSFV 120
           IAPDLIFNCGGLSVAFAFLTSWECSNTSSIFSRVQKLKKQFANLYVVVVLPTKEQNDSFV
Sbjct: 61  IAPDLIFNCGGLSVAFAFLTSWECSNTSSIFSRVQKLKKQFANLYVVVVLPTKEQNDSFV 120

Query: 121 QSYFRNGMEIGKPPFVAVQDIEMGFEKIVKIAHSRGACKQQDIISKLRTERKRSVQVMDA 180
           QSYFRNGMEIGKPPFVAVQDIEMGFEKIVKIAHSRGACKQQDIISKLRTERKRSVQVMDA
Sbjct: 121 QSYFRNGMEIGKPPFVAVQDIEMGFEKIVKIAHSRGACKQQDIISKLRTERKRSVQVMDA 180

Query: 181 FRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENTDLSVEKAERIRSFFRDPKL 240
           FRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENTDLSVEKAERIRSFFRDPKL
Sbjct: 181 FRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENTDLSVEKAERIRSFFRDPKL 240

Query: 241 YLSPKIN 248
           YLSPKIN
Sbjct: 241 YLSPKIN 247

[Close]

BLAST of CsaV3_2G033200 vs. NCBI nr
Match: XP_038884563.1 (protein PARTING DANCERS isoform X1 [Benincasa hispida] >XP_038884564.1 protein PARTING DANCERS isoform X1 [Benincasa hispida] >XP_038884565.1 protein PARTING DANCERS isoform X1 [Benincasa hispida])

HSP 1 Score: 468.8 bits (1205), Expect = 3.0e-128
Identity = 233/247 (94.33%), Postives = 240/247 (97.17%), Query Frame = 0


Query: 1   MANSSQRDADQMVGNQVKAKNDGGGVCLMSNVWRDEQHPSFINFISNFLCSNSFRLNFVP 60
           M NSSQRDA+QM GN+VKAKN GGGVCLMSNVWRDEQHPSFINF+SNFLC+NSFRLNFVP
Sbjct: 1   MENSSQRDANQMDGNRVKAKNSGGGVCLMSNVWRDEQHPSFINFMSNFLCTNSFRLNFVP 60

Query: 61  IAPDLIFNCGGLSVAFAFLTSWECSNTSSIFSRVQKLKKQFANLYVVVVLPTKEQNDSFV 120
           I PDLIFNCGGLSVAFAFLTSW+CSNTS I+SRVQKLKKQFAN YVVVVLPTKEQNDSFV
Sbjct: 61  IVPDLIFNCGGLSVAFAFLTSWDCSNTSPIYSRVQKLKKQFANFYVVVVLPTKEQNDSFV 120

Query: 121 QSYFRNGMEIGKPPFVAVQDIEMGFEKIVKIAHSRGACKQQDIISKLRTERKRSVQVMDA 180
           QSYFRNGMEIGKPPFVAVQDIEMGFEKIVKIAHSRGACKQQD+I KLRTERKRSVQVMDA
Sbjct: 121 QSYFRNGMEIGKPPFVAVQDIEMGFEKIVKIAHSRGACKQQDVILKLRTERKRSVQVMDA 180

Query: 181 FRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENTDLSVEKAERIRSFFRDPKL 240
           FRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENTDLSVEKAERIRSFFRDPKL
Sbjct: 181 FRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENTDLSVEKAERIRSFFRDPKL 240

Query: 241 YLSPKIN 248
           YLSPKIN
Sbjct: 241 YLSPKIN 247

[Close]

BLAST of CsaV3_2G033200 vs. NCBI nr
Match: XP_031737263.1 (protein PARTING DANCERS isoform X4 [Cucumis sativus])

HSP 1 Score: 468.0 bits (1203), Expect = 5.0e-128
Identity = 238/247 (96.36%), Postives = 238/247 (96.36%), Query Frame = 0


Query: 1   MANSSQRDADQMVGNQVKAKNDGGGVCLMSNVWRDEQHPSFINFISNFLCSNSFRLNFVP 60
           MANSSQRDADQMVGNQVKAKNDGGGVCLMSNVWRDEQHPSFINFISNFLCSNSFRLNFVP
Sbjct: 1   MANSSQRDADQMVGNQVKAKNDGGGVCLMSNVWRDEQHPSFINFISNFLCSNSFRLNFVP 60

Query: 61  IAPDLIFNCGGLSVAFAFLTSWECSNTSSIFSRVQKLKKQFANLYVVVVLPTKEQNDSFV 120
           IAPDLIFNCGGLSVAFAFLTSWECSNTSSIFSRVQKLKKQFANLYVVVVLPTKEQNDSFV
Sbjct: 61  IAPDLIFNCGGLSVAFAFLTSWECSNTSSIFSRVQKLKKQFANLYVVVVLPTKEQNDSFV 120

Query: 121 QSYFRNGMEIGKPPFVAVQDIEMGFEKIVKIAHSRGACKQQDIISKLRTERKRSVQVMDA 180
           QSYFRNGMEIGKPPFVAVQDIEMGFEKIVKIAHSRGACKQQDIISKLRTERKRSVQVMDA
Sbjct: 121 QSYFRNGMEIGKPPFVAVQDIEMGFEKIVKIAHSRGACKQQDIISKLRTERKRSVQVMDA 180

Query: 181 FRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENTDLSVEKAERIRSFFRDPKL 240
           FRRVMSSVPGLDDHDANS         AIAKASKEYILENTDLSVEKAERIRSFFRDPKL
Sbjct: 181 FRRVMSSVPGLDDHDANS---------AIAKASKEYILENTDLSVEKAERIRSFFRDPKL 238

Query: 241 YLSPKIN 248
           YLSPKIN
Sbjct: 241 YLSPKIN 238

[Close]

BLAST of CsaV3_2G033200 vs. NCBI nr
Match: XP_008441175.1 (PREDICTED: uncharacterized protein LOC103485388 isoform X3 [Cucumis melo])

HSP 1 Score: 463.4 bits (1191), Expect = 1.2e-126
Identity = 236/247 (95.55%), Postives = 238/247 (96.36%), Query Frame = 0


Query: 1   MANSSQRDADQMVGNQVKAKNDGGGVCLMSNVWRDEQHPSFINFISNFLCSNSFRLNFVP 60
           MANS    ADQM GN +KAKN GGGVCLMSNVWRDEQHPSFINFISNFLCSNSFRLNFVP
Sbjct: 1   MANS----ADQMDGNHMKAKNHGGGVCLMSNVWRDEQHPSFINFISNFLCSNSFRLNFVP 60

Query: 61  IAPDLIFNCGGLSVAFAFLTSWECSNTSSIFSRVQKLKKQFANLYVVVVLPTKEQNDSFV 120
           IAPDLIFNCGGLSVAFAFLTSW+CSNTSSIFSRVQKLKKQFANLYVVVVLPTKEQNDSFV
Sbjct: 61  IAPDLIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQFANLYVVVVLPTKEQNDSFV 120

Query: 121 QSYFRNGMEIGKPPFVAVQDIEMGFEKIVKIAHSRGACKQQDIISKLRTERKRSVQVMDA 180
           QSYFRNGMEIGKPPFVAVQDIEMGFEKIVKIAHSRGACKQQDIISKLRTERKRSVQVMDA
Sbjct: 121 QSYFRNGMEIGKPPFVAVQDIEMGFEKIVKIAHSRGACKQQDIISKLRTERKRSVQVMDA 180

Query: 181 FRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENTDLSVEKAERIRSFFRDPKL 240
           FRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENTDLSVEKAERIRSFFRDPK 
Sbjct: 181 FRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENTDLSVEKAERIRSFFRDPKF 240

Query: 241 YLSPKIN 248
           YLS KIN
Sbjct: 241 YLSLKIN 243

[Close]

BLAST of CsaV3_2G033200 vs. NCBI nr
Match: XP_022992780.1 (protein PARTING DANCERS [Cucurbita maxima])

HSP 1 Score: 451.4 bits (1160), Expect = 4.9e-123
Identity = 223/247 (90.28%), Postives = 234/247 (94.74%), Query Frame = 0


Query: 1   MANSSQRDADQMVGNQVKAKNDGGGVCLMSNVWRDEQHPSFINFISNFLCSNSFRLNFVP 60
           M + SQRD +QM GNQVKAKN GGGVCLMSN+WRDEQHPS INF+SNFL +NSFRLNFVP
Sbjct: 1   MGSLSQRDVNQMDGNQVKAKNSGGGVCLMSNIWRDEQHPSTINFMSNFLSTNSFRLNFVP 60

Query: 61  IAPDLIFNCGGLSVAFAFLTSWECSNTSSIFSRVQKLKKQFANLYVVVVLPTKEQNDSFV 120
           IAPDLIFNCGGLSVAFAF+TSW+CSNTSSIF RVQKL KQFAN YVVV LPTKEQNDSFV
Sbjct: 61  IAPDLIFNCGGLSVAFAFVTSWDCSNTSSIFCRVQKLMKQFANFYVVVALPTKEQNDSFV 120

Query: 121 QSYFRNGMEIGKPPFVAVQDIEMGFEKIVKIAHSRGACKQQDIISKLRTERKRSVQVMDA 180
           QSYFRNGMEIGKPPFV VQD+EMGFEKIVKIAHSRGACKQQD++SKLRTERKRSVQVMDA
Sbjct: 121 QSYFRNGMEIGKPPFVPVQDVEMGFEKIVKIAHSRGACKQQDVMSKLRTERKRSVQVMDA 180

Query: 181 FRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENTDLSVEKAERIRSFFRDPKL 240
           FRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENTDLSV+KAERIRSFFRDPK 
Sbjct: 181 FRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENTDLSVDKAERIRSFFRDPKF 240

Query: 241 YLSPKIN 248
           YLSPKIN
Sbjct: 241 YLSPKIN 247

[Close]

BLAST of CsaV3_2G033200 vs. ExPASy Swiss-Prot
Match: F4IDW9 (Protein PARTING DANCERS OS=Arabidopsis thaliana OX=3702 GN=PTD PE=1 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 5.7e-82
Identity = 152/238 (63.87%), Postives = 184/238 (77.31%), Query Frame = 0


Query: 10  DQMVGNQVKAKNDGGGVCLMSNVWRDEQHPSFINFISNFLCSNSFRLNFVPIAPDLIFNC 69
           D  V + +    +  GVC+MSN W+ EQ PS INFIS FL +NSFRLNFV I PDLIFNC
Sbjct: 13  DHQVSSPLVNLGNVAGVCIMSNAWKVEQEPSLINFISAFLSANSFRLNFVSIPPDLIFNC 72

Query: 70  GGLSVAFAFLTSWECSNTSSIFSRVQKLKKQFANLYVVVVLPTKEQNDSFVQSYFRNGME 129
           GG+S+AF F+T W+ SN +SIFSRV++LK QFA LYVV  L TKEQ+DSF++SYF+  ME
Sbjct: 73  GGVSIAFVFVTKWDFSNVASIFSRVKRLKGQFAQLYVVATLSTKEQSDSFMRSYFQYEME 132

Query: 130 IGKPPFVAVQDIEMGFEKIVKIAHSRGACKQQDIISKLRTERKRSVQVMDAFRRVMSSVP 189
            GKP FV V D EMGFEKIVKIAHSRG CKQQ + SKL+ ERKR+VQ  + F R ++S+P
Sbjct: 133 FGKPAFVQVTDAEMGFEKIVKIAHSRGVCKQQKVASKLKVERKRTVQDTNIFIRFVTSIP 192

Query: 190 GLDDHDANSLNQAIGSIEAIAKASKEYILENTDLSVEKAERIRSFFRDPKLYLSPKIN 248
            ++ HDAN+L QAIGSIEAIAKASKE IL NTDLS +KA+ +  FF+DP+ YLSPK N
Sbjct: 193 NINKHDANTLYQAIGSIEAIAKASKEDILANTDLSSKKADTLTRFFQDPEFYLSPKFN 250

[Close]

BLAST of CsaV3_2G033200 vs. ExPASy Swiss-Prot
Match: Q6L5B5 (Protein PARTING DANCERS homolog OS=Oryza sativa subsp. japonica OX=39947 GN=PTD PE=1 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 7.4e-82
Identity = 148/225 (65.78%), Postives = 183/225 (81.33%), Query Frame = 0


Query: 23  GGGVCLMSNVWRDEQHPSFINFISNFLCSNSFRLNFVPIAPDLIFNCGGLSVAFAFLTSW 82
           G GVC MS  WRD+Q PS INFI+ FL +NS+RLNF+ I+PD IFN G LSVAF F T+W
Sbjct: 24  GRGVCAMSTSWRDKQQPSLINFIAAFLAANSYRLNFLSISPDFIFNNGELSVAFIFETNW 83

Query: 83  ECSNTSSIFSRVQKLKKQFANLYVVVVLPTKEQNDSFVQSYFRNGMEIGKPPFVAVQDIE 142
           +C N  ++FSRV  LK+Q  +LYVVV +PTKEQN+SF +SY + GM++G P FV V D E
Sbjct: 84  DCQNEGAVFSRVNMLKRQLKHLYVVVAVPTKEQNESFNRSYHKYGMKLGFPTFVPVTDPE 143

Query: 143 MGFEKIVKIAHSRGACKQQDIISKLRTERKRSVQVMDAFRRVMSSVPGLDDHDANSLNQA 202
           MGFEKIVKIAH+ G CKQQDIIS+L+ ER+++VQ  D+F RV++S+PG+D+HDAN+L QA
Sbjct: 144 MGFEKIVKIAHALGVCKQQDIISRLKNEREQAVQCTDSFLRVLTSIPGIDNHDANALAQA 203

Query: 203 IGSIEAIAKASKEYILENTDLSVEKAERIRSFFRDPKLYLSPKIN 248
           IGSIEAIAKASK++ILENTDLS +KAE I  FFRDP+ YLSPKIN
Sbjct: 204 IGSIEAIAKASKKFILENTDLSTDKAETIVRFFRDPQYYLSPKIN 248

[Close]

BLAST of CsaV3_2G033200 vs. ExPASy TrEMBL
Match: A0A0A0LMP7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G401330 PE=4 SV=1)

HSP 1 Score: 491.5 bits (1264), Expect = 2.1e-135
Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 0


Query: 1   MANSSQRDADQMVGNQVKAKNDGGGVCLMSNVWRDEQHPSFINFISNFLCSNSFRLNFVP 60
           MANSSQRDADQMVGNQVKAKNDGGGVCLMSNVWRDEQHPSFINFISNFLCSNSFRLNFVP
Sbjct: 1   MANSSQRDADQMVGNQVKAKNDGGGVCLMSNVWRDEQHPSFINFISNFLCSNSFRLNFVP 60

Query: 61  IAPDLIFNCGGLSVAFAFLTSWECSNTSSIFSRVQKLKKQFANLYVVVVLPTKEQNDSFV 120
           IAPDLIFNCGGLSVAFAFLTSWECSNTSSIFSRVQKLKKQFANLYVVVVLPTKEQNDSFV
Sbjct: 61  IAPDLIFNCGGLSVAFAFLTSWECSNTSSIFSRVQKLKKQFANLYVVVVLPTKEQNDSFV 120

Query: 121 QSYFRNGMEIGKPPFVAVQDIEMGFEKIVKIAHSRGACKQQDIISKLRTERKRSVQVMDA 180
           QSYFRNGMEIGKPPFVAVQDIEMGFEKIVKIAHSRGACKQQDIISKLRTERKRSVQVMDA
Sbjct: 121 QSYFRNGMEIGKPPFVAVQDIEMGFEKIVKIAHSRGACKQQDIISKLRTERKRSVQVMDA 180

Query: 181 FRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENTDLSVEKAERIRSFFRDPKL 240
           FRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENTDLSVEKAERIRSFFRDPKL
Sbjct: 181 FRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENTDLSVEKAERIRSFFRDPKL 240

Query: 241 YLSPKIN 248
           YLSPKIN
Sbjct: 241 YLSPKIN 247

[Close]

BLAST of CsaV3_2G033200 vs. ExPASy TrEMBL
Match: A0A1S3B2D1 (uncharacterized protein LOC103485388 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103485388 PE=4 SV=1)

HSP 1 Score: 463.4 bits (1191), Expect = 6.0e-127
Identity = 236/247 (95.55%), Postives = 238/247 (96.36%), Query Frame = 0


Query: 1   MANSSQRDADQMVGNQVKAKNDGGGVCLMSNVWRDEQHPSFINFISNFLCSNSFRLNFVP 60
           MANS    ADQM GN +KAKN GGGVCLMSNVWRDEQHPSFINFISNFLCSNSFRLNFVP
Sbjct: 1   MANS----ADQMDGNHMKAKNHGGGVCLMSNVWRDEQHPSFINFISNFLCSNSFRLNFVP 60

Query: 61  IAPDLIFNCGGLSVAFAFLTSWECSNTSSIFSRVQKLKKQFANLYVVVVLPTKEQNDSFV 120
           IAPDLIFNCGGLSVAFAFLTSW+CSNTSSIFSRVQKLKKQFANLYVVVVLPTKEQNDSFV
Sbjct: 61  IAPDLIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQFANLYVVVVLPTKEQNDSFV 120

Query: 121 QSYFRNGMEIGKPPFVAVQDIEMGFEKIVKIAHSRGACKQQDIISKLRTERKRSVQVMDA 180
           QSYFRNGMEIGKPPFVAVQDIEMGFEKIVKIAHSRGACKQQDIISKLRTERKRSVQVMDA
Sbjct: 121 QSYFRNGMEIGKPPFVAVQDIEMGFEKIVKIAHSRGACKQQDIISKLRTERKRSVQVMDA 180

Query: 181 FRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENTDLSVEKAERIRSFFRDPKL 240
           FRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENTDLSVEKAERIRSFFRDPK 
Sbjct: 181 FRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENTDLSVEKAERIRSFFRDPKF 240

Query: 241 YLSPKIN 248
           YLS KIN
Sbjct: 241 YLSLKIN 243

[Close]

BLAST of CsaV3_2G033200 vs. ExPASy TrEMBL
Match: A0A6J1JWN6 (protein PARTING DANCERS OS=Cucurbita maxima OX=3661 GN=LOC111489015 PE=4 SV=1)

HSP 1 Score: 451.4 bits (1160), Expect = 2.4e-123
Identity = 223/247 (90.28%), Postives = 234/247 (94.74%), Query Frame = 0


Query: 1   MANSSQRDADQMVGNQVKAKNDGGGVCLMSNVWRDEQHPSFINFISNFLCSNSFRLNFVP 60
           M + SQRD +QM GNQVKAKN GGGVCLMSN+WRDEQHPS INF+SNFL +NSFRLNFVP
Sbjct: 1   MGSLSQRDVNQMDGNQVKAKNSGGGVCLMSNIWRDEQHPSTINFMSNFLSTNSFRLNFVP 60

Query: 61  IAPDLIFNCGGLSVAFAFLTSWECSNTSSIFSRVQKLKKQFANLYVVVVLPTKEQNDSFV 120
           IAPDLIFNCGGLSVAFAF+TSW+CSNTSSIF RVQKL KQFAN YVVV LPTKEQNDSFV
Sbjct: 61  IAPDLIFNCGGLSVAFAFVTSWDCSNTSSIFCRVQKLMKQFANFYVVVALPTKEQNDSFV 120

Query: 121 QSYFRNGMEIGKPPFVAVQDIEMGFEKIVKIAHSRGACKQQDIISKLRTERKRSVQVMDA 180
           QSYFRNGMEIGKPPFV VQD+EMGFEKIVKIAHSRGACKQQD++SKLRTERKRSVQVMDA
Sbjct: 121 QSYFRNGMEIGKPPFVPVQDVEMGFEKIVKIAHSRGACKQQDVMSKLRTERKRSVQVMDA 180

Query: 181 FRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENTDLSVEKAERIRSFFRDPKL 240
           FRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENTDLSV+KAERIRSFFRDPK 
Sbjct: 181 FRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENTDLSVDKAERIRSFFRDPKF 240

Query: 241 YLSPKIN 248
           YLSPKIN
Sbjct: 241 YLSPKIN 247

[Close]

BLAST of CsaV3_2G033200 vs. ExPASy TrEMBL
Match: A0A1S3B3G4 (uncharacterized protein LOC103485388 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485388 PE=4 SV=1)

HSP 1 Score: 450.3 bits (1157), Expect = 5.3e-123
Identity = 236/270 (87.41%), Postives = 238/270 (88.15%), Query Frame = 0


Query: 1   MANSSQRDADQMVGNQVKAKNDGGGVCLMSNVWRDEQHPSFINFISNFLCSNSFRLNFVP 60
           MANS    ADQM GN +KAKN GGGVCLMSNVWRDEQHPSFINFISNFLCSNSFRLNFVP
Sbjct: 1   MANS----ADQMDGNHMKAKNHGGGVCLMSNVWRDEQHPSFINFISNFLCSNSFRLNFVP 60

Query: 61  IAPDLIFNCGGLSVAFAFLTSWECSNTSSIFSRVQKLKKQFANLYVVVVLPTKEQNDSFV 120
           IAPDLIFNCGGLSVAFAFLTSW+CSNTSSIFSRVQKLKKQFANLYVVVVLPTKEQNDSFV
Sbjct: 61  IAPDLIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQFANLYVVVVLPTKEQNDSFV 120

Query: 121 QSYFRNGMEIGKPPFVAVQDIEMGFEKIVKIAHSRG-----------------------A 180
           QSYFRNGMEIGKPPFVAVQDIEMGFEKIVKIAHSRG                       A
Sbjct: 121 QSYFRNGMEIGKPPFVAVQDIEMGFEKIVKIAHSRGGSNHFKFWLNTFLNHLQQLYQITA 180

Query: 181 CKQQDIISKLRTERKRSVQVMDAFRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKEYI 240
           CKQQDIISKLRTERKRSVQVMDAFRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKEYI
Sbjct: 181 CKQQDIISKLRTERKRSVQVMDAFRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKEYI 240

Query: 241 LENTDLSVEKAERIRSFFRDPKLYLSPKIN 248
           LENTDLSVEKAERIRSFFRDPK YLS KIN
Sbjct: 241 LENTDLSVEKAERIRSFFRDPKFYLSLKIN 266

[Close]

BLAST of CsaV3_2G033200 vs. ExPASy TrEMBL
Match: A0A6J1DG15 (protein PARTING DANCERS isoform X1 OS=Momordica charantia OX=3673 GN=LOC111020175 PE=4 SV=1)

HSP 1 Score: 446.0 bits (1146), Expect = 9.9e-122
Identity = 219/247 (88.66%), Postives = 234/247 (94.74%), Query Frame = 0


Query: 1   MANSSQRDADQMVGNQVKAKNDGGGVCLMSNVWRDEQHPSFINFISNFLCSNSFRLNFVP 60
           MAN SQ DA++M GNQVKAKN  GGVCLMSNVWRDEQHPSFINF+SNFL +NSFRLNFVP
Sbjct: 1   MANLSQSDANRMAGNQVKAKNSDGGVCLMSNVWRDEQHPSFINFMSNFLSTNSFRLNFVP 60

Query: 61  IAPDLIFNCGGLSVAFAFLTSWECSNTSSIFSRVQKLKKQFANLYVVVVLPTKEQNDSFV 120
           IAPDLIFNCGGLSVAFAF+TSW+CSNTSSIFSRVQKLKKQFAN Y VV LPTKEQNDSFV
Sbjct: 61  IAPDLIFNCGGLSVAFAFVTSWDCSNTSSIFSRVQKLKKQFANFYAVVALPTKEQNDSFV 120

Query: 121 QSYFRNGMEIGKPPFVAVQDIEMGFEKIVKIAHSRGACKQQDIISKLRTERKRSVQVMDA 180
           +SYFRNGMEIGKPPF+ VQDIEMGFEKIVKIAHSRGACKQQD++SKLRTERKRSVQ MDA
Sbjct: 121 KSYFRNGMEIGKPPFLPVQDIEMGFEKIVKIAHSRGACKQQDVMSKLRTERKRSVQDMDA 180

Query: 181 FRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENTDLSVEKAERIRSFFRDPKL 240
           FRRV++SVPG+DDHDANSLNQAIGSIEAIAKASKEYILENTDLS +KAERIR+FFRDPK 
Sbjct: 181 FRRVITSVPGIDDHDANSLNQAIGSIEAIAKASKEYILENTDLSADKAERIRAFFRDPKF 240

Query: 241 YLSPKIN 248
           YLSPKIN
Sbjct: 241 YLSPKIN 247

[Close]

BLAST of CsaV3_2G033200 vs. TAIR 10
Match: AT1G12790.1 (CONTAINS InterPro DOMAIN/s: RuvA domain 2-like (InterPro:IPR010994); Has 29 Blast hits to 29 proteins in 9 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 305.4 bits (781), Expect = 4.0e-83
Identity = 152/238 (63.87%), Postives = 184/238 (77.31%), Query Frame = 0


Query: 10  DQMVGNQVKAKNDGGGVCLMSNVWRDEQHPSFINFISNFLCSNSFRLNFVPIAPDLIFNC 69
           D  V + +    +  GVC+MSN W+ EQ PS INFIS FL +NSFRLNFV I PDLIFNC
Sbjct: 13  DHQVSSPLVNLGNVAGVCIMSNAWKVEQEPSLINFISAFLSANSFRLNFVSIPPDLIFNC 72

Query: 70  GGLSVAFAFLTSWECSNTSSIFSRVQKLKKQFANLYVVVVLPTKEQNDSFVQSYFRNGME 129
           GG+S+AF F+T W+ SN +SIFSRV++LK QFA LYVV  L TKEQ+DSF++SYF+  ME
Sbjct: 73  GGVSIAFVFVTKWDFSNVASIFSRVKRLKGQFAQLYVVATLSTKEQSDSFMRSYFQYEME 132

Query: 130 IGKPPFVAVQDIEMGFEKIVKIAHSRGACKQQDIISKLRTERKRSVQVMDAFRRVMSSVP 189
            GKP FV V D EMGFEKIVKIAHSRG CKQQ + SKL+ ERKR+VQ  + F R ++S+P
Sbjct: 133 FGKPAFVQVTDAEMGFEKIVKIAHSRGVCKQQKVASKLKVERKRTVQDTNIFIRFVTSIP 192

Query: 190 GLDDHDANSLNQAIGSIEAIAKASKEYILENTDLSVEKAERIRSFFRDPKLYLSPKIN 248
            ++ HDAN+L QAIGSIEAIAKASKE IL NTDLS +KA+ +  FF+DP+ YLSPK N
Sbjct: 193 NINKHDANTLYQAIGSIEAIAKASKEDILANTDLSSKKADTLTRFFQDPEFYLSPKFN 250

The following BLAST results are available for this feature:

BLAST of CsaV3_2G033200 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004138826.1	4.3e-135	100.00	protein PARTING DANCERS isoform X3 [Cucumis sativus] >KGN63073.1 hypothetical pr...	[more]
XP_038884563.1	3.0e-128	94.33	protein PARTING DANCERS isoform X1 [Benincasa hispida] >XP_038884564.1 protein P...	[more]
XP_031737263.1	5.0e-128	96.36	protein PARTING DANCERS isoform X4 [Cucumis sativus]	[more]
XP_008441175.1	1.2e-126	95.55	PREDICTED: uncharacterized protein LOC103485388 isoform X3 [Cucumis melo]	[more]
XP_022992780.1	4.9e-123	90.28	protein PARTING DANCERS [Cucurbita maxima]	[more]

BLAST of CsaV3_2G033200 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4IDW9	5.7e-82	63.87	Protein PARTING DANCERS OS=Arabidopsis thaliana OX=3702 GN=PTD PE=1 SV=1	[more]
Q6L5B5	7.4e-82	65.78	Protein PARTING DANCERS homolog OS=Oryza sativa subsp. japonica OX=39947 GN=PTD ...	[more]

BLAST of CsaV3_2G033200 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LMP7	2.1e-135	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G401330 PE=4 SV=1	[more]
A0A1S3B2D1	6.0e-127	95.55	uncharacterized protein LOC103485388 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1JWN6	2.4e-123	90.28	protein PARTING DANCERS OS=Cucurbita maxima OX=3661 GN=LOC111489015 PE=4 SV=1	[more]
A0A1S3B3G4	5.3e-123	87.41	uncharacterized protein LOC103485388 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1DG15	9.9e-122	88.66	protein PARTING DANCERS isoform X1 OS=Momordica charantia OX=3673 GN=LOC11102017...	[more]

BLAST of CsaV3_2G033200 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G12790.1	4.0e-83	63.87	CONTAINS InterPro DOMAIN/s: RuvA domain 2-like (InterPro:IPR010994); Has 29 Blas...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.150.20		coord: 157..244 e-value: 4.6E-8 score: 34.6
IPR039172	Protein parting dancers	PANTHER	PTHR37394	PROTEIN PARTING DANCERS	coord: 17..247
IPR010994	RuvA domain 2-like	SUPERFAMILY	47781	RuvA domain 2-like	coord: 172..239

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_2G033200.1	CsaV3_2G033200.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000712	resolution of meiotic recombination intermediates