CsaV3_2G032900 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GTTTTGGAAGAAAAGAAATCGTTGTATTATCCGCCGCTTCATCAACAAAGACAATGACTACTACCCGTCTTTGTAGTTGATTGATCGCACTTTCCTTTTCTTTTTCAGATTGCAACAAAAATGGAGGACAACCCAAAATTTGTTGCCGTGAAAGAAGACGAGAACAACCCAAAATCCCCCTTTCCCTGGTTCTCTTTTCTTCCCAAGTTCGACTTCCGATTGCCTTTTCCGGTCAACGGCGGCAAGAAACCGCCGCCTGTGGTGGTTGATGAATCTCGAAAGGCTGACAATGATGCTCAGAAGCCGGAGTTCGTGAGGTTTCCTAAAGCAGAGTTGCCCGTCGCTTCGGTGGAGGCTGAAGCCGATGTTTCCGGGAAGACTTCCAATCCGGCGGTTGTCTGGCAGGTTTGTCTTCTCCTTTGTTTATATGAACTTGCTGCGCTTCTTATTAATATTGCACACAAGGTGTTTGTGAATTTGACTGAACTGGGAGTAACTTTTCACTGTTAAAACATCTCATTAAATGGTTTATTTGAGGGTTGGAGAATGTTTGATTTTTCTTGCCCTTTGTTTTGCCTTTTCTGTGGCTATGGTTTCAGCTTTTGGCTACCTAGTTTTCCTTTTCTTTATCCATTATTGATTAGTTTAGAACTTGAGATGATACCTTGGCAATCAATGCATGGAGAGTTCTTTCTCTATGATGTTTGAAAGCATGCAAGGTTTTCTCTCATGTACTAATGCAAATAGAGATTTAAACCTCAGGTGTCATTAGGTTGAGTTTCCCAATAATTCCAATACACTACTGAAATCTTTTGATAGCTTTTAGGATATAAAGAATTTTCAATTTTCATAGGACATAGATAGAATAGAAAGGAATCTGGAGGCCTAAATGCAACATGGTAAATTGTAGGGGTGAGACCAAACAGACCAAATTGACAAAACAGACGTGGATCAGTCGATTTTAGGAGATAAGTGATCCGAATGGCTGGAAACGTAATTCCTATTGATCGATCGAATATAATGATAGGGGTAAATTTCCTATTGTATCTGTATTTCAGTTAGACAACTAGCTGCTATCAATGTGTTTTATTTCTTCAGATTGAATTACCCTTTCTATTTCTAATAATTGAGAACTTGAAAGCCAGTGTTAGGAAGTTGTTAAAATTGAAAAAGAAAGGTGGATAAGATCTCTAGGAGAGCAAAGTGATCAGAGCAATTGAGAATAAGAAGGATCTAAAGAAGAGCAATCATGATATATATTCAAAGTACCCAGCCATATATGTTTATGTGCTATTAGTTTCAATTTTGCTGTGAACGAGCTATTTAAAAGTTAAAACAGATGAAGGAAGTATGAAAGTGAACTGGGGCCACTGAACCTTGTTGGTATATTCGTAAACTGAGGGATTGTGAAGTTATCACTTTATCAGGTGTCGTGTTCATAAAGTAGAGAATCCCATTATTGTCAAATTCATTCCTCAAACTTTCAAGTTTATCTCATTGGTCCACGAACTTTAAAAAGCATAACGTTGCATTCAATTTTCAATTATGTTTAAATGTGATTGACCTCTAAAATTGGTCTGTCAACTACGTGCAACGAGACTCTAAATTGTAAATGATGTTTAGTCTCTTGCTATCATTGTTGAAGTTTGAGCTTTTATGACTCCTTGCTTATAGCCTGAATCATTTCATGATATTAGGTATATGCCCTGGGCGGGTTTCTAATATTGAGTTGGGCATGGGCAAGATGGAAGGAGAGAAGGCCCCAAAGACGTTCAAATGATGATGATGAGGACGAGGACTCCAGTGATTCCTAGTTATGTGCTTGCCTTTGAACAGCCCTCAATAAATGTTGAAGTTAAATTCTTAGTGCTAGAATCAATCTCGAGTCAATACTGTTTATTTGTAATTTCGAGTTAAATCAGTCATTTCCTAACCCTTTGTTGATCCTTGCAAATGATCTTAATGTGAAATTAAAACTGTCTCCATATGCAAAATCTTAACATGAAATTAAAACTGTCTCCATAAGTGTTCTCTAATGCAAGAG ATGGAGGACAACCCAAAATTTGTTGCCGTGAAAGAAGACGAGAACAACCCAAAATCCCCCTTTCCCTGGTTCTCTTTTCTTCCCAAGTTCGACTTCCGATTGCCTTTTCCGGTCAACGGCGGCAAGAAACCGCCGCCTGTGGTGGTTGATGAATCTCGAAAGGCTGACAATGATGCTCAGAAGCCGGAGTTCGTGAGGTTTCCTAAAGCAGAGTTGCCCGTCGCTTCGGTGGAGGCTGAAGCCGATGTTTCCGGGAAGACTTCCAATCCGGCGGTTGTCTGGCAGGTATATGCCCTGGGCGGGTTTCTAATATTGAGTTGGGCATGGGCAAGATGGAAGGAGAGAAGGCCCCAAAGACGTTCAAATGATGATGATGAGGACGAGGACTCCAGTGATTCCTAG ATGGAGGACAACCCAAAATTTGTTGCCGTGAAAGAAGACGAGAACAACCCAAAATCCCCCTTTCCCTGGTTCTCTTTTCTTCCCAAGTTCGACTTCCGATTGCCTTTTCCGGTCAACGGCGGCAAGAAACCGCCGCCTGTGGTGGTTGATGAATCTCGAAAGGCTGACAATGATGCTCAGAAGCCGGAGTTCGTGAGGTTTCCTAAAGCAGAGTTGCCCGTCGCTTCGGTGGAGGCTGAAGCCGATGTTTCCGGGAAGACTTCCAATCCGGCGGTTGTCTGGCAGGTATATGCCCTGGGCGGGTTTCTAATATTGAGTTGGGCATGGGCAAGATGGAAGGAGAGAAGGCCCCAAAGACGTTCAAATGATGATGATGAGGACGAGGACTCCAGTGATTCCTAG MEDNPKFVAVKEDENNPKSPFPWFSFLPKFDFRLPFPVNGGKKPPPVVVDESRKADNDAQKPEFVRFPKAELPVASVEAEADVSGKTSNPAVVWQVYALGGFLILSWAWARWKERRPQRRSNDDDEDEDSSDS* Homology
BLAST of CsaV3_2G032900 vs. NCBI nr
Match: XP_004138679.1 (uncharacterized protein LOC101205088 [Cucumis sativus] >KGN63041.1 hypothetical protein Csa_022246 [Cucumis sativus]) HSP 1 Score: 275.4 bits (703), Expect = 2.6e-70 Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0
BLAST of CsaV3_2G032900 vs. NCBI nr
Match: XP_008456569.1 (PREDICTED: uncharacterized protein LOC103496485 [Cucumis melo] >TYK11738.1 uncharacterized protein E5676_scaffold304G00550 [Cucumis melo var. makuwa]) HSP 1 Score: 261.9 bits (668), Expect = 3.0e-66 Identity = 128/133 (96.24%), Postives = 131/133 (98.50%), Query Frame = 0
BLAST of CsaV3_2G032900 vs. NCBI nr
Match: XP_038886165.1 (uncharacterized protein LOC120076415 [Benincasa hispida]) HSP 1 Score: 247.3 bits (630), Expect = 7.6e-62 Identity = 118/134 (88.06%), Postives = 128/134 (95.52%), Query Frame = 0
BLAST of CsaV3_2G032900 vs. NCBI nr
Match: XP_023550789.1 (uncharacterized protein LOC111808822 isoform X3 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 212.6 bits (540), Expect = 2.1e-51 Identity = 102/133 (76.69%), Postives = 114/133 (85.71%), Query Frame = 0
BLAST of CsaV3_2G032900 vs. NCBI nr
Match: XP_023550786.1 (uncharacterized protein LOC111808822 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 212.6 bits (540), Expect = 2.1e-51 Identity = 102/133 (76.69%), Postives = 114/133 (85.71%), Query Frame = 0
BLAST of CsaV3_2G032900 vs. ExPASy TrEMBL
Match: A0A0A0LSR5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G386090 PE=4 SV=1) HSP 1 Score: 275.4 bits (703), Expect = 1.3e-70 Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0
BLAST of CsaV3_2G032900 vs. ExPASy TrEMBL
Match: A0A5D3CKR2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold304G00550 PE=4 SV=1) HSP 1 Score: 261.9 bits (668), Expect = 1.4e-66 Identity = 128/133 (96.24%), Postives = 131/133 (98.50%), Query Frame = 0
BLAST of CsaV3_2G032900 vs. ExPASy TrEMBL
Match: A0A1S3C3J3 (uncharacterized protein LOC103496485 OS=Cucumis melo OX=3656 GN=LOC103496485 PE=4 SV=1) HSP 1 Score: 261.9 bits (668), Expect = 1.4e-66 Identity = 128/133 (96.24%), Postives = 131/133 (98.50%), Query Frame = 0
BLAST of CsaV3_2G032900 vs. ExPASy TrEMBL
Match: A0A6J1JVP7 (uncharacterized protein LOC111489298 OS=Cucurbita maxima OX=3661 GN=LOC111489298 PE=4 SV=1) HSP 1 Score: 211.8 bits (538), Expect = 1.7e-51 Identity = 101/133 (75.94%), Postives = 114/133 (85.71%), Query Frame = 0
BLAST of CsaV3_2G032900 vs. ExPASy TrEMBL
Match: A0A6J1FFF8 (uncharacterized protein LOC111444995 OS=Cucurbita moschata OX=3662 GN=LOC111444995 PE=4 SV=1) HSP 1 Score: 210.3 bits (534), Expect = 5.0e-51 Identity = 101/133 (75.94%), Postives = 113/133 (84.96%), Query Frame = 0
BLAST of CsaV3_2G032900 vs. TAIR 10
Match: AT3G52230.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast outer membrane, chloroplast thylakoid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; Has 29 Blast hits to 29 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 75.1 bits (183), Expect = 4.8e-14 Identity = 47/108 (43.52%), Postives = 59/108 (54.63%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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