CsaV3_2G032750 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_2G032750
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	cyclin-dependent protein kinase inhibitor SMR1-like
Location	chr2: 21634475 .. 21637237 (-)
RNA-Seq Expression	CsaV3_2G032750
Synteny	CsaV3_2G032750

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTAAGAGTAAGTTTTTCACGATATTGTTCAAATTAAATAAGGGAGAGGACATTAAATTAATTTAAGATTTAAATTGATACAACTCACCGAAATTAGGAATAGAGTTAGAAGAGTAATTAGATAAATTTAGAGATGTATTAGAGACAGATGTATTTAGACATGATAGAGAAGGAGGTGGCGTGAAATGAAGAAGCATGATAAGAGGGCATTCTTCCTTCACCAACCTGTCTTAGTTCTATTAGCTTCTTTCTTTCTTTCCTCTTCTTCTTCAAAGTTCAAAGGGCACATCTTCCAAGTGATTTCCTAAATAAATACTCATCCATCCACTTTCCCCCCCTCTTTCTCTTCCATTACCTCAACCTCAATCTCAATCTCAATCTCCGAATAATCCCTTTCCGCCATGTCTATGGACCTTGAATTCCCCAAAAATCTCCCCAAAATCCGCCTTCCTTTACAGGTCCGATCCCCTCCCAAACCCTCCCTTTCCGACAACATCATACCCTCTTCCGATCATGACTCCGACCTCGACCGCCGTTCCTGCCGGACACCTACCTCCGCCGAGCACAAGATTCCCAAGATCCTCAGCTGTCCTGGCGCTCCTAAGAAGCCTAAACGCCCTCCAGTCCCTTGCAAGAGGAAGTTGACCATGGAGCTCAAATTCTTCGAGATCGTTAATCAAGAAGAAGTCGATAATTTCTTCCGATCCGCTTACGATCTTGAATCTTCTCCCACTGCGCCGCCTAAGAGGAGTTGCTGCCGGCCGTCAGCTTGATCAATTTCCAGATTGCCGGTTTGAGCCCTAAATTACTCTCTACACCCATTATAGAAAAATCAATTTTTCTTTAATTCTTTCTTTTCCTCTTTTTTCTCCTTTCCTTCTCCCATAGCGAATCAGCTCTTTGATGTGTATTATTATTACACGTACATACACATGGAATCCAATCGAATCGAATGCGATTCCTCTTAATTGCATCCATCAGAGTAATGATAATCGTATTAGGATTATCAATATCAACCAACCGCTTAGAAAAAGGGAAAAAAAAAAAAAAAACGAAAATTATGCACATATGTTTCCGAAAATCCTCAACGATTTCCTGAAATTCGTTCTTTAATCGCTGGGTTTCCATCTCTATCACCTGCGGATTTCTTTCTGAATTGTCGATCTGAAATATATTCCTAAATTAGAAAAACCCTAACTATTTCGTATGTACTGTTAGCTTGAATACGATCTGTTGTTGCAATAATTAGGTCTAGAAATAATGAATTTAAATGGTGACTAGTGAAGGAAAAATATAGGACTATCTTGATGATTTCCTTTTCAATTCTGCTTTTGGGTGTTTGATTTGCAGATTCATTGCCCTGATTTTTGCTCTGCTTTTGAAGTAATTCATACGGCGTTAGGGAATTTTTGTAATTTTTGTAATTTATTTTGTGGATCAATTTTTCCAGATACAAAGAGAGAGACGTATTGGAATTTCTTTCCTAATTTCAAAATTTAGAGAGATAAGAAGTGCTTCTTCGTTCTTCCTTCCCCAAATTTATTTATTAAATTAAATTTCACTCTATCCCCAATTTCAAATTATAGAGAGAGAGAAAATTTGGGGGGAGTTGAAATTTTTTAAGAGAGAGAATAAGATAGAGGGAGGCAAAATTTTAAAATTTTTTTTAATGAAAAATGAAAAATGAAAAATTATTATTAATTTTTTATTTTATTTGTCCTATTGTAGGCCACAACTTTCCCCAGGCAAAAAAGGGGTAAATTTAATATGTCTCAACTCCACATTATTTTATTTTCAGTGCTTTATTATCTTTTTTTTTTATATATATATATAAATTGACAAAATTAAAAAGAAAAAAAAAATGGTAAGATGCAAAAATGAGACCATCAAATTAATTGGAGTGTTTCAACTAAGAGGATATAATCGTAATGATATTTGTATTTAGGGGTAGTCTTTTGTAATTTGTGAAAAGAGAAGTGGAAATGTATGAAAAGGAATAATATGTGAGAACTGATGTATATTGGGGATTAATATTTGGAACATTATCATGAATAGTTAGATAGCACTTTTATTGTGCTCTTTCAACAAGTGGCTGTGCCTATCCTTTAGCTCATCCAATTAAGTCAAAATTATAAATCATTATTAATTCAACCCTACATCCACACACACATATATATATACAATAGAAAAATATATATTTTCGTTCTAACATATGAATCAAAACCTTGGAAATTTCTATTTCTTTTTTGGCTCCTTTTGGATATAAAATTATTTATATTTGATGAAGAGATGAATAACATATAAGATAGATGAATTCTAAAATGAACTTAATTATTGTATTAAATAATAATAATATTACTTTAGTTCGTATTGTTTGAGAACCTTTTGTATGCATAATTTCATTATTCTTTCCTCTTGAAGTAAAATTTTAGATAAATTGTAAAAACCCCTCCTAGTGATGCTTCCAATTATCCCTTAAACTTTCCAAATTCAAAATTTGAGTCCCTAAAATTTAAATTTAACTATTTGTATAAATGATATTGATTATTATTTTGTGGGTCTAATTTTTATAAGTTTAGGAGTCTAATTGTTTATTTTTAAAAGTTTGAAGAGGTAATTACTAACAAAGGGTGGTTTTTACAAATTTCCTTAAATTTTTTCTCCATACTTTTTTTTCAAGTAATTTAATTAGTTTATTATTTCTTTTTACATATGTTTGAAGTTTTTACTCATAATTCCTAATTCTAAAATTTGGAAGAAGGAA

mRNA sequence

ATGTCTATGGACCTTGAATTCCCCAAAAATCTCCCCAAAATCCGCCTTCCTTTACAGGTCCGATCCCCTCCCAAACCCTCCCTTTCCGACAACATCATACCCTCTTCCGATCATGACTCCGACCTCGACCGCCGTTCCTGCCGGACACCTACCTCCGCCGAGCACAAGATTCCCAAGATCCTCAGCTGTCCTGGCGCTCCTAAGAAGCCTAAACGCCCTCCAGTCCCTTGCAAGAGGAAGTTGACCATGGAGCTCAAATTCTTCGAGATCGTTAATCAAGAAGAAGTCGATAATTTCTTCCGATCCGCTTACGATCTTGAATCTTCTCCCACTGCGCCGCCTAAGAGGAGTTGCTGCCGGCCGTCAGCTTGA

Coding sequence (CDS)

ATGTCTATGGACCTTGAATTCCCCAAAAATCTCCCCAAAATCCGCCTTCCTTTACAGGTCCGATCCCCTCCCAAACCCTCCCTTTCCGACAACATCATACCCTCTTCCGATCATGACTCCGACCTCGACCGCCGTTCCTGCCGGACACCTACCTCCGCCGAGCACAAGATTCCCAAGATCCTCAGCTGTCCTGGCGCTCCTAAGAAGCCTAAACGCCCTCCAGTCCCTTGCAAGAGGAAGTTGACCATGGAGCTCAAATTCTTCGAGATCGTTAATCAAGAAGAAGTCGATAATTTCTTCCGATCCGCTTACGATCTTGAATCTTCTCCCACTGCGCCGCCTAAGAGGAGTTGCTGCCGGCCGTCAGCTTGA

Protein sequence

MSMDLEFPKNLPKIRLPLQVRSPPKPSLSDNIIPSSDHDSDLDRRSCRTPTSAEHKIPKILSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDNFFRSAYDLESSPTAPPKRSCCRPSA*

Homology

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BLAST of CsaV3_2G032750 vs. NCBI nr
Match: XP_011649858.1 (cyclin-dependent protein kinase inhibitor SMR1 [Cucumis sativus] >KGN63026.1 hypothetical protein Csa_022022 [Cucumis sativus])

HSP 1 Score: 251.9 bits (642), Expect = 2.8e-63
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0


Query: 1   MSMDLEFPKNLPKIRLPLQVRSPPKPSLSDNIIPSSDHDSDLDRRSCRTPTSAEHKIPKI 60
           MSMDLEFPKNLPKIRLPLQVRSPPKPSLSDNIIPSSDHDSDLDRRSCRTPTSAEHKIPKI
Sbjct: 1   MSMDLEFPKNLPKIRLPLQVRSPPKPSLSDNIIPSSDHDSDLDRRSCRTPTSAEHKIPKI 60

Query: 61  LSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDNFFRSAYDLESSPTAPPKRSCCR 120
           LSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDNFFRSAYDLESSPTAPPKRSCCR
Sbjct: 61  LSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDNFFRSAYDLESSPTAPPKRSCCR 120

Query: 121 PSA 124
           PSA
Sbjct: 121 PSA 123

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BLAST of CsaV3_2G032750 vs. NCBI nr
Match: XP_008456553.1 (PREDICTED: cyclin-dependent protein kinase inhibitor SMR1-like [Cucumis melo] >KAA0057132.1 cyclin-dependent protein kinase inhibitor SMR1-like [Cucumis melo var. makuwa] >TYJ97113.1 cyclin-dependent protein kinase inhibitor SMR1-like [Cucumis melo var. makuwa])

HSP 1 Score: 247.7 bits (631), Expect = 5.4e-62
Identity = 121/123 (98.37%), Postives = 122/123 (99.19%), Query Frame = 0


Query: 1   MSMDLEFPKNLPKIRLPLQVRSPPKPSLSDNIIPSSDHDSDLDRRSCRTPTSAEHKIPKI 60
           MSMDLEFPKNLPKIRLPLQVRSPPKPSLSDNIIPSSDHDSDLDRRSCRTPTSAEHKIPKI
Sbjct: 1   MSMDLEFPKNLPKIRLPLQVRSPPKPSLSDNIIPSSDHDSDLDRRSCRTPTSAEHKIPKI 60

Query: 61  LSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDNFFRSAYDLESSPTAPPKRSCCR 120
           LSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDNFFRSAYDLESS TAPPKR+CCR
Sbjct: 61  LSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDNFFRSAYDLESSSTAPPKRNCCR 120

Query: 121 PSA 124
           PSA
Sbjct: 121 PSA 123

[Close]

BLAST of CsaV3_2G032750 vs. NCBI nr
Match: XP_038884240.1 (cyclin-dependent protein kinase inhibitor SMR1-like [Benincasa hispida])

HSP 1 Score: 227.6 bits (579), Expect = 5.7e-56
Identity = 114/121 (94.21%), Postives = 116/121 (95.87%), Query Frame = 0


Query: 1   MSMDLEFPKNLPKIRLPLQVRSPPKPSLSDNIIPS-SDHDSDLDRRSCRTPTSAEHKIPK 60
           MSMDLEFPKNLPKIRLPLQVRSPPKPSLSDNI  S SD DSDLDRRSCRTPTSAEHKIPK
Sbjct: 1   MSMDLEFPKNLPKIRLPLQVRSPPKPSLSDNIPSSASDRDSDLDRRSCRTPTSAEHKIPK 60

Query: 61  ILSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDNFFRSAYDLESSPTAPPKRSCC 120
           ILSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDNFFRSAYDLE+S TAPPKR+CC
Sbjct: 61  ILSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDNFFRSAYDLEASSTAPPKRTCC 120

[Close]

BLAST of CsaV3_2G032750 vs. NCBI nr
Match: XP_023521119.1 (cyclin-dependent protein kinase inhibitor SMR1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 211.5 bits (537), Expect = 4.3e-51
Identity = 107/122 (87.70%), Postives = 112/122 (91.80%), Query Frame = 0


Query: 1   MSMDLEFPKNLPKIRLPLQVRSPPKPSLSDNIIPS-SDHD-SDLDRRSCRTPTSAEHKIP 60
           MSMDLEFP+NLPKIRLPLQVRSPPKPS S NI  S SDHD +DLD R CRTPTSAEHKIP
Sbjct: 1   MSMDLEFPENLPKIRLPLQVRSPPKPSNSINIPSSVSDHDGADLDHRGCRTPTSAEHKIP 60

Query: 61  KILSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDNFFRSAYDLESSPTAPPKRSC 120
           KI+SCPGAP+KPKRPPVPCKRKLTMELKFFE VNQEEVDNFFRSAYDLE+S TAPPKRSC
Sbjct: 61  KIISCPGAPRKPKRPPVPCKRKLTMELKFFEFVNQEEVDNFFRSAYDLEASSTAPPKRSC 120

[Close]

BLAST of CsaV3_2G032750 vs. NCBI nr
Match: XP_022990487.1 (cyclin-dependent protein kinase inhibitor SMR1-like [Cucurbita maxima])

HSP 1 Score: 209.5 bits (532), Expect = 1.6e-50
Identity = 106/122 (86.89%), Postives = 111/122 (90.98%), Query Frame = 0


Query: 1   MSMDLEFPKNLPKIRLPLQVRSPPKPSLSDNIIPS-SDHD-SDLDRRSCRTPTSAEHKIP 60
           MSMDLEFP+NLPKIRLPLQVRSPPKPS S NI  S SDHD +DLD R CRTPTSAEHKIP
Sbjct: 1   MSMDLEFPENLPKIRLPLQVRSPPKPSNSINIPSSVSDHDGADLDHRGCRTPTSAEHKIP 60

Query: 61  KILSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDNFFRSAYDLESSPTAPPKRSC 120
           KI+SCPGAP+KPKRPPVPCKRKLTMELKFFE VNQEEVDNFFRSAYDLE+S  APPKRSC
Sbjct: 61  KIISCPGAPRKPKRPPVPCKRKLTMELKFFEFVNQEEVDNFFRSAYDLEASSAAPPKRSC 120

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BLAST of CsaV3_2G032750 vs. ExPASy Swiss-Prot
Match: Q9LPP4 (Cyclin-dependent protein kinase inhibitor SMR1 OS=Arabidopsis thaliana OX=3702 GN=SMR1 PE=1 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 4.9e-10
Identity = 51/130 (39.23%), Postives = 68/130 (52.31%), Query Frame = 0


Query: 3   MDLEFPKNLPKIRLPLQVRSPPKPSLSDNIIPSSDHDSDLDRRSCRTPTSAEHKIPKIL- 62
           MDLE  ++L K   P  ++   K S +       + D D D   C TPTS EHKIP ++ 
Sbjct: 1   MDLELLQDLSKFNFPTPIKIRSKTSKT----KKDEGDDDEDDLRCSTPTSQEHKIPAVVD 60

Query: 63  SCPGAPKKPKRPPV-----------PCKRKL---TMELKFFEIVNQEEVDNFFRSAYDLE 118
           S P  P+KP+ PP             CKRKL   T E+    I+N+EE+D FF S Y+ E
Sbjct: 61  SPPPPPRKPRPPPSAPSATAALMIRSCKRKLLVSTCEI----IMNREEIDRFFSSVYN-E 120

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BLAST of CsaV3_2G032750 vs. ExPASy Swiss-Prot
Match: Q9LZ78 (Cyclin-dependent protein kinase inhibitor SIM OS=Arabidopsis thaliana OX=3702 GN=SIM PE=1 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 5.1e-07
Identity = 38/113 (33.63%), Postives = 58/113 (51.33%), Query Frame = 0


Query: 3   MDLEFPKNLPKIRLPLQVRSPPKPSLSDNIIPSSDHDSDLDRRSCRTPTSAEHKIPKILS 62
           MDL+  ++LP +  P  ++              ++ + D D   C TPTS++HKIP   +
Sbjct: 1   MDLDLIQDLPILNFPPAIKI------------RANTNRDDDGGGCTTPTSSDHKIPPTTA 60

Query: 63  C--PGAPKKPKRPPVP-------CKRKLTMELKFFE-IVNQEEVDNFFRSAYD 106
              P  P+KP+ P  P       CKRKL   L  +E IVN++E++ FF S Y+
Sbjct: 61  TTPPPPPQKPRPPSTPSSLGIRSCKRKLMTSLSKYEIIVNKDEIERFFSSVYN 101

[Close]

BLAST of CsaV3_2G032750 vs. ExPASy Swiss-Prot
Match: Q9LZ60 (Cyclin-dependent protein kinase inhibitor SMR3 OS=Arabidopsis thaliana OX=3702 GN=SMR3 PE=1 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 8.2e-05
Identity = 34/84 (40.48%), Postives = 46/84 (54.76%), Query Frame = 0


Query: 19 QVRSPPKPSLSDNIIPSSDHDSDL--DRRSCRTPTSAEHKIP--KILSCPGAPKKPK-RP 78
          ++R P +P L    IP SDH+     +   C+TPTS++HKIP  K   CP AP+KPK   
Sbjct: 17 KIRLPTRPELD---IPDSDHEDPTVNEEEGCKTPTSSDHKIPEVKYTLCPPAPRKPKPNR 76

Query: 79 PVPCKRKLTMELKFFEIVNQEEVD 98
              KRKLT       +VN+  +D
Sbjct: 77 SSGTKRKLTP----VNVVNRIPID 93

[Close]

BLAST of CsaV3_2G032750 vs. ExPASy TrEMBL
Match: A0A0A0LSQ6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G384460 PE=4 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 1.4e-63
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0


Query: 1   MSMDLEFPKNLPKIRLPLQVRSPPKPSLSDNIIPSSDHDSDLDRRSCRTPTSAEHKIPKI 60
           MSMDLEFPKNLPKIRLPLQVRSPPKPSLSDNIIPSSDHDSDLDRRSCRTPTSAEHKIPKI
Sbjct: 1   MSMDLEFPKNLPKIRLPLQVRSPPKPSLSDNIIPSSDHDSDLDRRSCRTPTSAEHKIPKI 60

Query: 61  LSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDNFFRSAYDLESSPTAPPKRSCCR 120
           LSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDNFFRSAYDLESSPTAPPKRSCCR
Sbjct: 61  LSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDNFFRSAYDLESSPTAPPKRSCCR 120

Query: 121 PSA 124
           PSA
Sbjct: 121 PSA 123

[Close]

BLAST of CsaV3_2G032750 vs. ExPASy TrEMBL
Match: A0A5A7UMQ0 (Cyclin-dependent protein kinase inhibitor SMR1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold371G00200 PE=4 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 2.6e-62
Identity = 121/123 (98.37%), Postives = 122/123 (99.19%), Query Frame = 0


Query: 1   MSMDLEFPKNLPKIRLPLQVRSPPKPSLSDNIIPSSDHDSDLDRRSCRTPTSAEHKIPKI 60
           MSMDLEFPKNLPKIRLPLQVRSPPKPSLSDNIIPSSDHDSDLDRRSCRTPTSAEHKIPKI
Sbjct: 1   MSMDLEFPKNLPKIRLPLQVRSPPKPSLSDNIIPSSDHDSDLDRRSCRTPTSAEHKIPKI 60

Query: 61  LSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDNFFRSAYDLESSPTAPPKRSCCR 120
           LSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDNFFRSAYDLESS TAPPKR+CCR
Sbjct: 61  LSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDNFFRSAYDLESSSTAPPKRNCCR 120

Query: 121 PSA 124
           PSA
Sbjct: 121 PSA 123

[Close]

BLAST of CsaV3_2G032750 vs. ExPASy TrEMBL
Match: A0A1S3C3L4 (cyclin-dependent protein kinase inhibitor SMR1-like OS=Cucumis melo OX=3656 GN=LOC103496472 PE=4 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 2.6e-62
Identity = 121/123 (98.37%), Postives = 122/123 (99.19%), Query Frame = 0


Query: 1   MSMDLEFPKNLPKIRLPLQVRSPPKPSLSDNIIPSSDHDSDLDRRSCRTPTSAEHKIPKI 60
           MSMDLEFPKNLPKIRLPLQVRSPPKPSLSDNIIPSSDHDSDLDRRSCRTPTSAEHKIPKI
Sbjct: 1   MSMDLEFPKNLPKIRLPLQVRSPPKPSLSDNIIPSSDHDSDLDRRSCRTPTSAEHKIPKI 60

Query: 61  LSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDNFFRSAYDLESSPTAPPKRSCCR 120
           LSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDNFFRSAYDLESS TAPPKR+CCR
Sbjct: 61  LSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDNFFRSAYDLESSSTAPPKRNCCR 120

Query: 121 PSA 124
           PSA
Sbjct: 121 PSA 123

[Close]

BLAST of CsaV3_2G032750 vs. ExPASy TrEMBL
Match: A0A6J1JIW3 (cyclin-dependent protein kinase inhibitor SMR1-like OS=Cucurbita maxima OX=3661 GN=LOC111487335 PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 7.8e-51
Identity = 106/122 (86.89%), Postives = 111/122 (90.98%), Query Frame = 0


Query: 1   MSMDLEFPKNLPKIRLPLQVRSPPKPSLSDNIIPS-SDHD-SDLDRRSCRTPTSAEHKIP 60
           MSMDLEFP+NLPKIRLPLQVRSPPKPS S NI  S SDHD +DLD R CRTPTSAEHKIP
Sbjct: 1   MSMDLEFPENLPKIRLPLQVRSPPKPSNSINIPSSVSDHDGADLDHRGCRTPTSAEHKIP 60

Query: 61  KILSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDNFFRSAYDLESSPTAPPKRSC 120
           KI+SCPGAP+KPKRPPVPCKRKLTMELKFFE VNQEEVDNFFRSAYDLE+S  APPKRSC
Sbjct: 61  KIISCPGAPRKPKRPPVPCKRKLTMELKFFEFVNQEEVDNFFRSAYDLEASSAAPPKRSC 120

[Close]

BLAST of CsaV3_2G032750 vs. ExPASy TrEMBL
Match: A0A6J1E540 (cyclin-dependent protein kinase inhibitor SMR1-like OS=Cucurbita moschata OX=3662 GN=LOC111430821 PE=4 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 1.7e-50
Identity = 106/122 (86.89%), Postives = 111/122 (90.98%), Query Frame = 0


Query: 1   MSMDLEFPKNLPKIRLPLQVRSPPKPSLSDNIIPS-SDHD-SDLDRRSCRTPTSAEHKIP 60
           MSMDLEFP+NLPKIRLPLQVRSPPKPS S NI  S SDHD +DLD R CRTPTSAEHKIP
Sbjct: 1   MSMDLEFPENLPKIRLPLQVRSPPKPSNSINIPSSVSDHDGADLDHRGCRTPTSAEHKIP 60

Query: 61  KILSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDNFFRSAYDLESSPTAPPKRSC 120
           KI+SCPGAP+KPKRPPVPCKRKLTMELKFFE VNQEEVDNFFRSAYDLE+S TAP KRSC
Sbjct: 61  KIISCPGAPRKPKRPPVPCKRKLTMELKFFEFVNQEEVDNFFRSAYDLEASSTAPSKRSC 120

[Close]

BLAST of CsaV3_2G032750 vs. TAIR 10
Match: AT3G10525.1 (LOSS OF GIANT CELLS FROM ORGANS )

HSP 1 Score: 65.5 bits (158), Expect = 3.5e-11
Identity = 51/130 (39.23%), Postives = 68/130 (52.31%), Query Frame = 0


Query: 3   MDLEFPKNLPKIRLPLQVRSPPKPSLSDNIIPSSDHDSDLDRRSCRTPTSAEHKIPKIL- 62
           MDLE  ++L K   P  ++   K S +       + D D D   C TPTS EHKIP ++ 
Sbjct: 1   MDLELLQDLSKFNFPTPIKIRSKTSKT----KKDEGDDDEDDLRCSTPTSQEHKIPAVVD 60

Query: 63  SCPGAPKKPKRPPV-----------PCKRKL---TMELKFFEIVNQEEVDNFFRSAYDLE 118
           S P  P+KP+ PP             CKRKL   T E+    I+N+EE+D FF S Y+ E
Sbjct: 61  SPPPPPRKPRPPPSAPSATAALMIRSCKRKLLVSTCEI----IMNREEIDRFFSSVYN-E 120

[Close]

BLAST of CsaV3_2G032750 vs. TAIR 10
Match: AT5G04470.1 (cyclin-dependent protein kinase inhibitors )

HSP 1 Score: 55.5 bits (132), Expect = 3.6e-08
Identity = 38/113 (33.63%), Postives = 58/113 (51.33%), Query Frame = 0


Query: 3   MDLEFPKNLPKIRLPLQVRSPPKPSLSDNIIPSSDHDSDLDRRSCRTPTSAEHKIPKILS 62
           MDL+  ++LP +  P  ++              ++ + D D   C TPTS++HKIP   +
Sbjct: 1   MDLDLIQDLPILNFPPAIKI------------RANTNRDDDGGGCTTPTSSDHKIPPTTA 60

Query: 63  C--PGAPKKPKRPPVP-------CKRKLTMELKFFE-IVNQEEVDNFFRSAYD 106
              P  P+KP+ P  P       CKRKL   L  +E IVN++E++ FF S Y+
Sbjct: 61  TTPPPPPQKPRPPSTPSSLGIRSCKRKLMTSLSKYEIIVNKDEIERFFSSVYN 101

[Close]

BLAST of CsaV3_2G032750 vs. TAIR 10
Match: AT5G02420.1 (unknown protein; Has 90 Blast hits to 90 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 48.1 bits (113), Expect = 5.8e-06
Identity = 34/84 (40.48%), Postives = 46/84 (54.76%), Query Frame = 0


Query: 19 QVRSPPKPSLSDNIIPSSDHDSDL--DRRSCRTPTSAEHKIP--KILSCPGAPKKPK-RP 78
          ++R P +P L    IP SDH+     +   C+TPTS++HKIP  K   CP AP+KPK   
Sbjct: 17 KIRLPTRPELD---IPDSDHEDPTVNEEEGCKTPTSSDHKIPEVKYTLCPPAPRKPKPNR 76

Query: 79 PVPCKRKLTMELKFFEIVNQEEVD 98
              KRKLT       +VN+  +D
Sbjct: 77 SSGTKRKLTP----VNVVNRIPID 93

[Close]

BLAST of CsaV3_2G032750 vs. TAIR 10
Match: AT1G08180.1 (unknown protein; Has 53 Blast hits to 53 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 52; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 42.7 bits (99), Expect = 2.4e-04
Identity = 29/84 (34.52%), Postives = 48/84 (57.14%), Query Frame = 0


Query: 20  VRSPPKPSLSDNIIPSSDHDSDLDRRSCRTPTSAEHKIPKILSCPGAP-KKPKRPPVPCK 79
           V   P+    ++   SS  +  L+  S  TPTS++HKIP++ +CP  P K+P+   +  K
Sbjct: 14  VEQKPRSQEEEDHQDSSKKEELLE--SLCTPTSSDHKIPEVETCPPPPRKRPREISLTKK 73

Query: 80  RKLTMELKFFEI--VNQEEVDNFF 101
            +L+ +L+FFE   V  +EV+  F
Sbjct: 74  TRLSKDLRFFEATDVGSQEVETLF 95

The following BLAST results are available for this feature:

BLAST of CsaV3_2G032750 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011649858.1	2.8e-63	100.00	cyclin-dependent protein kinase inhibitor SMR1 [Cucumis sativus] >KGN63026.1 hyp...	[more]
XP_008456553.1	5.4e-62	98.37	PREDICTED: cyclin-dependent protein kinase inhibitor SMR1-like [Cucumis melo] >K...	[more]
XP_038884240.1	5.7e-56	94.21	cyclin-dependent protein kinase inhibitor SMR1-like [Benincasa hispida]	[more]
XP_023521119.1	4.3e-51	87.70	cyclin-dependent protein kinase inhibitor SMR1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022990487.1	1.6e-50	86.89	cyclin-dependent protein kinase inhibitor SMR1-like [Cucurbita maxima]	[more]

BLAST of CsaV3_2G032750 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LPP4	4.9e-10	39.23	Cyclin-dependent protein kinase inhibitor SMR1 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q9LZ78	5.1e-07	33.63	Cyclin-dependent protein kinase inhibitor SIM OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9LZ60	8.2e-05	40.48	Cyclin-dependent protein kinase inhibitor SMR3 OS=Arabidopsis thaliana OX=3702 G...	[more]

BLAST of CsaV3_2G032750 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LSQ6	1.4e-63	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G384460 PE=4 SV=1	[more]
A0A5A7UMQ0	2.6e-62	98.37	Cyclin-dependent protein kinase inhibitor SMR1-like OS=Cucumis melo var. makuwa ...	[more]
A0A1S3C3L4	2.6e-62	98.37	cyclin-dependent protein kinase inhibitor SMR1-like OS=Cucumis melo OX=3656 GN=L...	[more]
A0A6J1JIW3	7.8e-51	86.89	cyclin-dependent protein kinase inhibitor SMR1-like OS=Cucurbita maxima OX=3661 ...	[more]
A0A6J1E540	1.7e-50	86.89	cyclin-dependent protein kinase inhibitor SMR1-like OS=Cucurbita moschata OX=366...	[more]

BLAST of CsaV3_2G032750 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G10525.1	3.5e-11	39.23	LOSS OF GIANT CELLS FROM ORGANS	[more]
AT5G04470.1	3.6e-08	33.63	cyclin-dependent protein kinase inhibitors	[more]
AT5G02420.1	5.8e-06	40.48	unknown protein; Has 90 Blast hits to 90 proteins in 10 species: Archae - 0; Bac...	[more]
AT1G08180.1	2.4e-04	34.52	unknown protein; Has 53 Blast hits to 53 proteins in 9 species: Archae - 0; Bact...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 36..52
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..54
None	No IPR available	PANTHER	PTHR33142:SF55	CYCLIN-DEPENDENT PROTEIN KINASE INHIBITOR SMR14	coord: 3..105
IPR040389	Cyclin-dependent protein kinase inhibitor SMR	PANTHER	PTHR33142	CYCLIN-DEPENDENT PROTEIN KINASE INHIBITOR SMR13	coord: 3..105

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_2G032750.1	CsaV3_2G032750.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032875	regulation of DNA endoreduplication