CsaV3_2G032230 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_2G032230
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	nuclear transcription factor Y subunit gamma-like
Location	chr2: 21251615 .. 21252801 (-)
RNA-Seq Expression	CsaV3_2G032230
Synteny	CsaV3_2G032230

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCACACCACCGATACAAACTTGGTTTACCAAAACGTAATCCCAAATCCCCAATCTGAGAGTGAACCGAAACAAAAAACCTAAATAATACTCTTCTCCATGAAGAAGGAAACAAGCGGCCCAGTTCTCCGCCCATTTCCCGCCGGCGCTCGATTTCAATCTCAATTCTCTTCTCCTGGGATTTCTTCGTTCGCTGCTTCAACAAACTTCGGCTTCTCTTCCGGATCCTCAATCTTTCTCCAAAACCACGATCACGACGATCATCATCATAACCACCATCGATCCGTTTCTCCTACTCGTGTCAACATTTCTTCCACTCCCCTGTCTCACTCTGTTCGATTTTCCATTGGTCACCGAACCGGTTCGCCGACACTTTCCAACCGGAACTCGCCGGTTTCTCTACCGAAAAAGCCGTGCACGTGTTCGCCGACGACTCACCCCGGTTCCTTCCGGTGCAGTCTACATAAAAAGTCGGGAAGTGGCATTCACCAACATCAGGCGTCGTCGTCGGCGTATTCATCGAGCGGTTTGAACATGCGGAGGTCTGCGATGACGAACTCGCTGGTGAGAATCGGTGGGGTTGAAGGAGAGTGGGTCAAGCGAGCGTTGACTGCTTTGATTCGACCCTCTTCACACCAGTTGAGAAGACGAGCCAATTTCCGGCCGCAGCCCAGCCGGCTTTCGGTCATGTCGAAGGCCGATTGATTAGTTTGATTGATTTTTGGCAGATTTAAGTGAAGTCAAATCATCTGTTAAAGTAAATTTGTGAATTAGATTGTACAAAATTAGATATAAGAAATGCAATTGTGAATACACATTTTAAAACCGAACTGTTCTTCCATCGATTGAAACCGGTTGCCGTTGTAATTTGTTTGGGTCTGATATTCGGTAGCCGTTATTTTACCGTGGCGACTGAGTTTGCTTCTATGTCAGGTTATATAGTAAACTAATTGATTTCTTCATGCCATTTTTTTCAAATAACTATTTTTAATGTTTCTAGTTTTTGTATTTTATTAATTTCAGTGTGGTTTTATAGGTGATGATAATATGCTTGGGATTGACTGTTGATGGAGGTGAGAATCCATTAAAATGGAGGAGACAGGTTTCTGTTGTAAAGAACATGGAGAGAAGAGGAATTATAGTTTTTTTATAATTAAAAAAAACCAACAAATTCAATTAAGGAATTTG

mRNA sequence

ATGAAGAAGGAAACAAGCGGCCCAGTTCTCCGCCCATTTCCCGCCGGCGCTCGATTTCAATCTCAATTCTCTTCTCCTGGGATTTCTTCGTTCGCTGCTTCAACAAACTTCGGCTTCTCTTCCGGATCCTCAATCTTTCTCCAAAACCACGATCACGACGATCATCATCATAACCACCATCGATCCGTTTCTCCTACTCGTGTCAACATTTCTTCCACTCCCCTGTCTCACTCTGTTCGATTTTCCATTGGTCACCGAACCGGTTCGCCGACACTTTCCAACCGGAACTCGCCGGTTTCTCTACCGAAAAAGCCGTGCACGTGTTCGCCGACGACTCACCCCGGTTCCTTCCGGTGCAGTCTACATAAAAAGTCGGGAAGTGGCATTCACCAACATCAGGCGTCGTCGTCGGCGTATTCATCGAGCGGTTTGAACATGCGGAGGTCTGCGATGACGAACTCGCTGGTGAGAATCGGTGGGGTTGAAGGAGAGTGGGTCAAGCGAGCGTTGACTGCTTTGATTCGACCCTCTTCACACCAGTTGAGAAGACGAGCCAATTTCCGGCCGCAGCCCAGCCGGCTTTCGGTCATGTCGAAGGCCGATTGA

Coding sequence (CDS)

ATGAAGAAGGAAACAAGCGGCCCAGTTCTCCGCCCATTTCCCGCCGGCGCTCGATTTCAATCTCAATTCTCTTCTCCTGGGATTTCTTCGTTCGCTGCTTCAACAAACTTCGGCTTCTCTTCCGGATCCTCAATCTTTCTCCAAAACCACGATCACGACGATCATCATCATAACCACCATCGATCCGTTTCTCCTACTCGTGTCAACATTTCTTCCACTCCCCTGTCTCACTCTGTTCGATTTTCCATTGGTCACCGAACCGGTTCGCCGACACTTTCCAACCGGAACTCGCCGGTTTCTCTACCGAAAAAGCCGTGCACGTGTTCGCCGACGACTCACCCCGGTTCCTTCCGGTGCAGTCTACATAAAAAGTCGGGAAGTGGCATTCACCAACATCAGGCGTCGTCGTCGGCGTATTCATCGAGCGGTTTGAACATGCGGAGGTCTGCGATGACGAACTCGCTGGTGAGAATCGGTGGGGTTGAAGGAGAGTGGGTCAAGCGAGCGTTGACTGCTTTGATTCGACCCTCTTCACACCAGTTGAGAAGACGAGCCAATTTCCGGCCGCAGCCCAGCCGGCTTTCGGTCATGTCGAAGGCCGATTGA

Protein sequence

MKKETSGPVLRPFPAGARFQSQFSSPGISSFAASTNFGFSSGSSIFLQNHDHDDHHHNHHRSVSPTRVNISSTPLSHSVRFSIGHRTGSPTLSNRNSPVSLPKKPCTCSPTTHPGSFRCSLHKKSGSGIHQHQASSSAYSSSGLNMRRSAMTNSLVRIGGVEGEWVKRALTALIRPSSHQLRRRANFRPQPSRLSVMSKAD*

Homology

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BLAST of CsaV3_2G032230 vs. NCBI nr
Match: XP_004138717.1 (uncharacterized protein LOC101214709 [Cucumis sativus] >KGN62968.1 hypothetical protein Csa_021857 [Cucumis sativus])

HSP 1 Score: 393.3 bits (1009), Expect = 1.3e-105
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0


Query: 1   MKKETSGPVLRPFPAGARFQSQFSSPGISSFAASTNFGFSSGSSIFLQNHDHDDHHHNHH 60
           MKKETSGPVLRPFPAGARFQSQFSSPGISSFAASTNFGFSSGSSIFLQNHDHDDHHHNHH
Sbjct: 1   MKKETSGPVLRPFPAGARFQSQFSSPGISSFAASTNFGFSSGSSIFLQNHDHDDHHHNHH 60

Query: 61  RSVSPTRVNISSTPLSHSVRFSIGHRTGSPTLSNRNSPVSLPKKPCTCSPTTHPGSFRCS 120
           RSVSPTRVNISSTPLSHSVRFSIGHRTGSPTLSNRNSPVSLPKKPCTCSPTTHPGSFRCS
Sbjct: 61  RSVSPTRVNISSTPLSHSVRFSIGHRTGSPTLSNRNSPVSLPKKPCTCSPTTHPGSFRCS 120

Query: 121 LHKKSGSGIHQHQASSSAYSSSGLNMRRSAMTNSLVRIGGVEGEWVKRALTALIRPSSHQ 180
           LHKKSGSGIHQHQASSSAYSSSGLNMRRSAMTNSLVRIGGVEGEWVKRALTALIRPSSHQ
Sbjct: 121 LHKKSGSGIHQHQASSSAYSSSGLNMRRSAMTNSLVRIGGVEGEWVKRALTALIRPSSHQ 180

Query: 181 LRRRANFRPQPSRLSVMSKAD 202
           LRRRANFRPQPSRLSVMSKAD
Sbjct: 181 LRRRANFRPQPSRLSVMSKAD 201

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BLAST of CsaV3_2G032230 vs. NCBI nr
Match: XP_008445241.1 (PREDICTED: nuclear transcription factor Y subunit gamma-like [Cucumis melo] >KAA0064910.1 nuclear transcription factor Y subunit gamma-like [Cucumis melo var. makuwa])

HSP 1 Score: 361.7 bits (927), Expect = 4.1e-96
Identity = 187/201 (93.03%), Postives = 191/201 (95.02%), Query Frame = 0


Query: 1   MKKETSGPVLRPFPAGARFQSQFSSPGISSFAASTNFGFSSGSSIFLQNHDHDDHHHNHH 60
           MKKETSGPVLRPFPAG RFQSQFSSPG S FAASTNFGFSSGSS FLQN  HDDHHHNHH
Sbjct: 1   MKKETSGPVLRPFPAGGRFQSQFSSPGTSPFAASTNFGFSSGSSTFLQN--HDDHHHNHH 60

Query: 61  RSVSPTRVNISSTPLSHSVRFSIGHRTGSPTLSNRNSPVSLPKKPCTCSPTTHPGSFRCS 120
           RS SPTRVNISSTPLS SVRFSIGHR+GSP LSNRNSPVSLPKKPC CSPTTHPGSFRCS
Sbjct: 61  RSASPTRVNISSTPLSRSVRFSIGHRSGSPKLSNRNSPVSLPKKPCMCSPTTHPGSFRCS 120

Query: 121 LHKKSGSGIHQHQASSSAYSSSGLNMRRSAMTNSLVRIGGVEGEWVKRALTALIRPSSHQ 180
           LHKKSGSGIHQHQASSSAYSS+GLNMRRSAMTNSLVRIGGVEG+WVKRALTALIRPSSHQ
Sbjct: 121 LHKKSGSGIHQHQASSSAYSSTGLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRPSSHQ 180

Query: 181 LRRRANFRPQPSRLSVMSKAD 202
           LRRRANFRPQPSRLSVMSKA+
Sbjct: 181 LRRRANFRPQPSRLSVMSKAE 199

[Close]

BLAST of CsaV3_2G032230 vs. NCBI nr
Match: XP_038885670.1 (uncharacterized protein LOC120075978 [Benincasa hispida])

HSP 1 Score: 307.0 bits (785), Expect = 1.2e-79
Identity = 169/205 (82.44%), Postives = 175/205 (85.37%), Query Frame = 0


Query: 1   MKKETSGPVLRPFPAGARFQSQFSSPGISSFAASTNFGFSSGSSIFLQNHDHDDHHHNHH 60
           MKKETSGPVL PF AG +F S  SSPG S FAASTNFGFSS SS F QNHD     HNH 
Sbjct: 1   MKKETSGPVLWPFHAGGQFHSPISSPGTSPFAASTNFGFSSASSTFFQNHD----DHNHQ 60

Query: 61  RSVSPTRVNISSTPLSHSVRFSIGHRTGSP----TLSNRNSPVSLPKKPCTCSPTTHPGS 120
           RS SPTRVNISSTPLS SVRFSI HR+GSP    TLS+RNSPV LPKKPC CSPTTHPGS
Sbjct: 61  RSASPTRVNISSTPLSRSVRFSISHRSGSPSRSITLSSRNSPVPLPKKPCACSPTTHPGS 120

Query: 121 FRCSLHKKSGSGIHQHQASSSAYSSSGLNMRRSAMTNSLVRIGGVEGEWVKRALTALIRP 180
           FRCSLHK SGSG H HQASSSAY+SSGLNMRRSAMTNSLVRIGGVEG+WVKRALTALIRP
Sbjct: 121 FRCSLHKNSGSGGH-HQASSSAYASSGLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRP 180

Query: 181 SSHQLRRRANFRPQPSRLSVMSKAD 202
           SSHQLRRRANFRPQ SRLSVMSKA+
Sbjct: 181 SSHQLRRRANFRPQRSRLSVMSKAE 200

[Close]

BLAST of CsaV3_2G032230 vs. NCBI nr
Match: KAG6598561.1 (Protein MEMO1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 271.9 bits (694), Expect = 4.3e-69
Identity = 155/205 (75.61%), Postives = 164/205 (80.00%), Query Frame = 0


Query: 1   MKKETSGPVLRPFPAGARFQSQFSSPGISSFAASTNFGFSSGSSIFLQNHDHDDHHHNHH 60
           MKKETSGPVLRP PA  RF S  SSP    FAAST+FGFSS SS F          HNH 
Sbjct: 1   MKKETSGPVLRPLPAAGRFHSPISSP----FAASTSFGFSSTSSSFF---------HNHE 60

Query: 61  RSVSPTRVNISSTPLSHSVRFSIGHRTGSPT----LSNRNSPVSLPKKPCTCSPTTHPGS 120
           RS SPTRVNISS PLS SVRFSI HR+GSP+    LSNRNSPVS PKK CTCSPTTHPGS
Sbjct: 61  RSASPTRVNISSGPLSRSVRFSIDHRSGSPSRSIALSNRNSPVSQPKKTCTCSPTTHPGS 120

Query: 121 FRCSLHKKSGSGIHQHQASSSAYSSSGLNMRRSAMTNSLVRIGGVEGEWVKRALTALIRP 180
           FRCSLH+ SG+G H HQ     +SSSGLNMRRSAMTNSLVRIGGVEG+WVKRALTALIRP
Sbjct: 121 FRCSLHRNSGNGGH-HQ----THSSSGLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRP 180

Query: 181 SSHQLRRRANFRPQPSRLSVMSKAD 202
           SSHQLRRRANFRP+PSRLSV+SKAD
Sbjct: 181 SSHQLRRRANFRPRPSRLSVVSKAD 187

[Close]

BLAST of CsaV3_2G032230 vs. NCBI nr
Match: XP_023547160.1 (uncharacterized protein LOC111806049 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 271.6 bits (693), Expect = 5.6e-69
Identity = 154/205 (75.12%), Postives = 164/205 (80.00%), Query Frame = 0


Query: 1   MKKETSGPVLRPFPAGARFQSQFSSPGISSFAASTNFGFSSGSSIFLQNHDHDDHHHNHH 60
           MKKETSGPVLRP PA  RF S  +SP    FAAST+FGFSS SS F          HNH 
Sbjct: 1   MKKETSGPVLRPLPAAGRFHSPIASP----FAASTSFGFSSTSSSFF---------HNHE 60

Query: 61  RSVSPTRVNISSTPLSHSVRFSIGHRTGSPT----LSNRNSPVSLPKKPCTCSPTTHPGS 120
           RS SPTRVNISS PLS SVRFSI HR+GSP+    LSNRNSPVS PKK CTCSPTTHPGS
Sbjct: 61  RSASPTRVNISSGPLSRSVRFSIDHRSGSPSRSIALSNRNSPVSQPKKTCTCSPTTHPGS 120

Query: 121 FRCSLHKKSGSGIHQHQASSSAYSSSGLNMRRSAMTNSLVRIGGVEGEWVKRALTALIRP 180
           FRCSLH+ SG+G H HQ     YSSSGLNMRRSAMTNSLVRIGGVEG+WVKRALTALIRP
Sbjct: 121 FRCSLHRNSGNGGH-HQ----TYSSSGLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRP 180

Query: 181 SSHQLRRRANFRPQPSRLSVMSKAD 202
           SSHQLRRRANFRP+PSRLSV+S+AD
Sbjct: 181 SSHQLRRRANFRPRPSRLSVVSRAD 187

[Close]

BLAST of CsaV3_2G032230 vs. ExPASy TrEMBL
Match: A0A0A0LME8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G382420 PE=4 SV=1)

HSP 1 Score: 393.3 bits (1009), Expect = 6.2e-106
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0


Query: 1   MKKETSGPVLRPFPAGARFQSQFSSPGISSFAASTNFGFSSGSSIFLQNHDHDDHHHNHH 60
           MKKETSGPVLRPFPAGARFQSQFSSPGISSFAASTNFGFSSGSSIFLQNHDHDDHHHNHH
Sbjct: 1   MKKETSGPVLRPFPAGARFQSQFSSPGISSFAASTNFGFSSGSSIFLQNHDHDDHHHNHH 60

Query: 61  RSVSPTRVNISSTPLSHSVRFSIGHRTGSPTLSNRNSPVSLPKKPCTCSPTTHPGSFRCS 120
           RSVSPTRVNISSTPLSHSVRFSIGHRTGSPTLSNRNSPVSLPKKPCTCSPTTHPGSFRCS
Sbjct: 61  RSVSPTRVNISSTPLSHSVRFSIGHRTGSPTLSNRNSPVSLPKKPCTCSPTTHPGSFRCS 120

Query: 121 LHKKSGSGIHQHQASSSAYSSSGLNMRRSAMTNSLVRIGGVEGEWVKRALTALIRPSSHQ 180
           LHKKSGSGIHQHQASSSAYSSSGLNMRRSAMTNSLVRIGGVEGEWVKRALTALIRPSSHQ
Sbjct: 121 LHKKSGSGIHQHQASSSAYSSSGLNMRRSAMTNSLVRIGGVEGEWVKRALTALIRPSSHQ 180

Query: 181 LRRRANFRPQPSRLSVMSKAD 202
           LRRRANFRPQPSRLSVMSKAD
Sbjct: 181 LRRRANFRPQPSRLSVMSKAD 201

[Close]

BLAST of CsaV3_2G032230 vs. ExPASy TrEMBL
Match: A0A5A7VCJ2 (Nuclear transcription factor Y subunit gamma-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G002280 PE=4 SV=1)

HSP 1 Score: 361.7 bits (927), Expect = 2.0e-96
Identity = 187/201 (93.03%), Postives = 191/201 (95.02%), Query Frame = 0


Query: 1   MKKETSGPVLRPFPAGARFQSQFSSPGISSFAASTNFGFSSGSSIFLQNHDHDDHHHNHH 60
           MKKETSGPVLRPFPAG RFQSQFSSPG S FAASTNFGFSSGSS FLQN  HDDHHHNHH
Sbjct: 1   MKKETSGPVLRPFPAGGRFQSQFSSPGTSPFAASTNFGFSSGSSTFLQN--HDDHHHNHH 60

Query: 61  RSVSPTRVNISSTPLSHSVRFSIGHRTGSPTLSNRNSPVSLPKKPCTCSPTTHPGSFRCS 120
           RS SPTRVNISSTPLS SVRFSIGHR+GSP LSNRNSPVSLPKKPC CSPTTHPGSFRCS
Sbjct: 61  RSASPTRVNISSTPLSRSVRFSIGHRSGSPKLSNRNSPVSLPKKPCMCSPTTHPGSFRCS 120

Query: 121 LHKKSGSGIHQHQASSSAYSSSGLNMRRSAMTNSLVRIGGVEGEWVKRALTALIRPSSHQ 180
           LHKKSGSGIHQHQASSSAYSS+GLNMRRSAMTNSLVRIGGVEG+WVKRALTALIRPSSHQ
Sbjct: 121 LHKKSGSGIHQHQASSSAYSSTGLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRPSSHQ 180

Query: 181 LRRRANFRPQPSRLSVMSKAD 202
           LRRRANFRPQPSRLSVMSKA+
Sbjct: 181 LRRRANFRPQPSRLSVMSKAE 199

[Close]

BLAST of CsaV3_2G032230 vs. ExPASy TrEMBL
Match: A0A1S3BC71 (nuclear transcription factor Y subunit gamma-like OS=Cucumis melo OX=3656 GN=LOC103488327 PE=4 SV=1)

HSP 1 Score: 361.7 bits (927), Expect = 2.0e-96
Identity = 187/201 (93.03%), Postives = 191/201 (95.02%), Query Frame = 0


Query: 1   MKKETSGPVLRPFPAGARFQSQFSSPGISSFAASTNFGFSSGSSIFLQNHDHDDHHHNHH 60
           MKKETSGPVLRPFPAG RFQSQFSSPG S FAASTNFGFSSGSS FLQN  HDDHHHNHH
Sbjct: 1   MKKETSGPVLRPFPAGGRFQSQFSSPGTSPFAASTNFGFSSGSSTFLQN--HDDHHHNHH 60

Query: 61  RSVSPTRVNISSTPLSHSVRFSIGHRTGSPTLSNRNSPVSLPKKPCTCSPTTHPGSFRCS 120
           RS SPTRVNISSTPLS SVRFSIGHR+GSP LSNRNSPVSLPKKPC CSPTTHPGSFRCS
Sbjct: 61  RSASPTRVNISSTPLSRSVRFSIGHRSGSPKLSNRNSPVSLPKKPCMCSPTTHPGSFRCS 120

Query: 121 LHKKSGSGIHQHQASSSAYSSSGLNMRRSAMTNSLVRIGGVEGEWVKRALTALIRPSSHQ 180
           LHKKSGSGIHQHQASSSAYSS+GLNMRRSAMTNSLVRIGGVEG+WVKRALTALIRPSSHQ
Sbjct: 121 LHKKSGSGIHQHQASSSAYSSTGLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRPSSHQ 180

Query: 181 LRRRANFRPQPSRLSVMSKAD 202
           LRRRANFRPQPSRLSVMSKA+
Sbjct: 181 LRRRANFRPQPSRLSVMSKAE 199

[Close]

BLAST of CsaV3_2G032230 vs. ExPASy TrEMBL
Match: A0A6J1BPT3 (uncharacterized protein LOC111004669 OS=Momordica charantia OX=3673 GN=LOC111004669 PE=4 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 8.0e-69
Identity = 153/206 (74.27%), Postives = 164/206 (79.61%), Query Frame = 0


Query: 1   MKKETSGPVLRPFPAGARFQSQF---SSPGISSFAASTNFGFSSGSSIFLQNHDHDDHHH 60
           MKKETSGPVLRP   G RF S     SSP  S FAASTNFGFSSGSS F  +H HDDHH 
Sbjct: 1   MKKETSGPVLRPLSPGDRFPSPISSSSSPASSPFAASTNFGFSSGSSTFFHDHRHDDHH- 60

Query: 61  NHHRSVSPTRVNISSTPLSHSVRFSIGHRTGSPTLSNRNSPVSLPKKPCTCSPTTHPGSF 120
            HHRS SPTRVN+SSTPLSHSVRFSI HR  S +  N + P+SLPKK C CSPTTHPGSF
Sbjct: 61  -HHRSASPTRVNLSSTPLSHSVRFSIDHR--STSKRNGHVPISLPKKSCMCSPTTHPGSF 120

Query: 121 RCSLHK--KSGSGIHQHQASSSAYSSSGLNMRRSAMTNSLVRIGGVEGEWVKRALTALIR 180
           RCS HK   SG G H H  +SS Y S+ LNMRRSAMTNSLVRIGGVEG+WVKRALTALIR
Sbjct: 121 RCSQHKNSNSGGGGHPHHQTSS-YPSTRLNMRRSAMTNSLVRIGGVEGDWVKRALTALIR 180

Query: 181 PSSHQLRRRANFRPQPSRLSVMSKAD 202
           PSSHQLRRRANF+P+PSRLSVMSKA+
Sbjct: 181 PSSHQLRRRANFQPRPSRLSVMSKAE 201

[Close]

BLAST of CsaV3_2G032230 vs. ExPASy TrEMBL
Match: A0A6J1HGM5 (uncharacterized protein LOC111462780 OS=Cucurbita moschata OX=3662 GN=LOC111462780 PE=4 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 3.9e-68
Identity = 154/205 (75.12%), Postives = 162/205 (79.02%), Query Frame = 0


Query: 1   MKKETSGPVLRPFPAGARFQSQFSSPGISSFAASTNFGFSSGSSIFLQNHDHDDHHHNHH 60
           MKKETSGPVLRP PA  RF S  SSP    FAAST+FGFSS SS F          HN  
Sbjct: 1   MKKETSGPVLRPLPAAGRFHSPISSP----FAASTSFGFSSTSSSFF---------HNRE 60

Query: 61  RSVSPTRVNISSTPLSHSVRFSIGHRTGSPT----LSNRNSPVSLPKKPCTCSPTTHPGS 120
           RS SPTRVNISS PLS SVRFSI HR+GS +    LSNRNSPVS PKK CTCSPTTHPGS
Sbjct: 61  RSASPTRVNISSGPLSRSVRFSIDHRSGSTSRSIALSNRNSPVSQPKKTCTCSPTTHPGS 120

Query: 121 FRCSLHKKSGSGIHQHQASSSAYSSSGLNMRRSAMTNSLVRIGGVEGEWVKRALTALIRP 180
           FRCSLH+ SG+G H HQ     YSSSGLNMRRSAMTNSLVRIGGVEG+WVKRALTALIRP
Sbjct: 121 FRCSLHRNSGNGGH-HQ----TYSSSGLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRP 180

Query: 181 SSHQLRRRANFRPQPSRLSVMSKAD 202
           SSHQLRRRANFRP+PSRLSV+SKAD
Sbjct: 181 SSHQLRRRANFRPRPSRLSVVSKAD 187

[Close]

BLAST of CsaV3_2G032230 vs. TAIR 10
Match: AT5G11090.1 (serine-rich protein-related )

HSP 1 Score: 195.7 bits (496), Expect = 3.7e-50
Identity = 115/214 (53.74%), Postives = 150/214 (70.09%), Query Frame = 0


Query: 2   KKETSGPVLRPFPAGARFQSQFS----SPGISSFAASTNFGFSSGSSIFLQNHDHDDHHH 61
           + +++GPVLR      RF   +S    S   S+FA+ST+  FSS SS F  NH H + +H
Sbjct: 7   RTKSNGPVLRSQSPSGRFCGGYSRAVPSSSSSAFASSTSSSFSSPSSAFFSNHRHHESNH 66

Query: 62  NHHRSVSPTRVNI-SSTPLSHSVRFSIGHRTGSPTLSNRNSPVSLPKKP---------CT 121
           +HHRS SPTRVN+ ++ P+S S R+S+  R+ SPT  N++  VS  + P         C 
Sbjct: 67  SHHRSASPTRVNLYTAQPMSQSFRYSLDSRSISPT--NKSISVSKNQPPSHNHKISRRCM 126

Query: 122 CSPTTHPGSFRCSLHKKSGSGIHQHQASSSAYSSSGLNMRRSAMTNSLVRIGGVEGEWVK 181
           CSPTTHPGSFRCSLHK      + H   +++Y+++GLNMRRSAMTNSLVRIGGVEGEWV+
Sbjct: 127 CSPTTHPGSFRCSLHKNVA---NPHGQGTASYTTNGLNMRRSAMTNSLVRIGGVEGEWVR 186

Query: 182 RALTALIRPSSHQLRRRANFRPQPSRLSVMSKAD 202
           RALT LIRPSSH L+RRA ++P+PSRLS+M+KAD
Sbjct: 187 RALTTLIRPSSHHLKRRAAYQPRPSRLSIMAKAD 215

[Close]

BLAST of CsaV3_2G032230 vs. TAIR 10
Match: AT5G25280.1 (serine-rich protein-related )

HSP 1 Score: 178.3 bits (451), Expect = 6.1e-45
Identity = 105/187 (56.15%), Postives = 135/187 (72.19%), Query Frame = 0


Query: 24  SSPGISSFAASTNFGFSSGSSIFLQNHDHDDHHHNHHRSVSPTRVNI-SSTPLSHSVRFS 83
           SSP  S FA+ST+  FSS S+ F  +H+ ++HH   HRS SPTRVN+ +S P++ S R+S
Sbjct: 37  SSPSSSGFASSTSSSFSSPSTAFFSSHNQNNHH--QHRSASPTRVNLFTSAPMTQSFRYS 96

Query: 84  IGHRTGSPTLS---NRNSPVSLPKKP-----CTCSPTTHPGSFRCSLHKKSGSGIHQHQA 143
           I +R+ SP  S   + N P +  K P     C CSPTTHPGSFRCSLHK      + H  
Sbjct: 97  IDNRSISPNRSIAVSSNKPSNHHKIPDSRRRCMCSPTTHPGSFRCSLHKNVA---NPHGQ 156

Query: 144 SSSAYSSSGLNMRRSAMTNSLVRIGGVEGEWVKRALTALIRPSSHQLRRRANFRPQPSRL 202
            +++Y+++GLNMRRSAMTNSLVRIGGVEGEWV+RALT LIRPSSHQL+RR+ + P+ SRL
Sbjct: 157 GTASYTTNGLNMRRSAMTNSLVRIGGVEGEWVRRALTTLIRPSSHQLKRRSAYEPRRSRL 216

[Close]

BLAST of CsaV3_2G032230 vs. TAIR 10
Match: AT5G25280.2 (serine-rich protein-related )

HSP 1 Score: 178.3 bits (451), Expect = 6.1e-45
Identity = 105/187 (56.15%), Postives = 135/187 (72.19%), Query Frame = 0


Query: 24  SSPGISSFAASTNFGFSSGSSIFLQNHDHDDHHHNHHRSVSPTRVNI-SSTPLSHSVRFS 83
           SSP  S FA+ST+  FSS S+ F  +H+ ++HH   HRS SPTRVN+ +S P++ S R+S
Sbjct: 37  SSPSSSGFASSTSSSFSSPSTAFFSSHNQNNHH--QHRSASPTRVNLFTSAPMTQSFRYS 96

Query: 84  IGHRTGSPTLS---NRNSPVSLPKKP-----CTCSPTTHPGSFRCSLHKKSGSGIHQHQA 143
           I +R+ SP  S   + N P +  K P     C CSPTTHPGSFRCSLHK      + H  
Sbjct: 97  IDNRSISPNRSIAVSSNKPSNHHKIPDSRRRCMCSPTTHPGSFRCSLHKNVA---NPHGQ 156

Query: 144 SSSAYSSSGLNMRRSAMTNSLVRIGGVEGEWVKRALTALIRPSSHQLRRRANFRPQPSRL 202
            +++Y+++GLNMRRSAMTNSLVRIGGVEGEWV+RALT LIRPSSHQL+RR+ + P+ SRL
Sbjct: 157 GTASYTTNGLNMRRSAMTNSLVRIGGVEGEWVRRALTTLIRPSSHQLKRRSAYEPRRSRL 216

[Close]

BLAST of CsaV3_2G032230 vs. TAIR 10
Match: AT5G20370.1 (serine-rich protein-related )

HSP 1 Score: 82.0 bits (201), Expect = 5.9e-16
Identity = 63/168 (37.50%), Postives = 84/168 (50.00%), Query Frame = 0


Query: 52  HDDHHHNH-HRSVSPTRVNIS---------STPLSHSVRFSIGHRTGSPTLSNRNSPVSL 111
           H++HHH+H  RS SP   N++         S P    V  S  H+T              
Sbjct: 22  HNNHHHHHRQRSPSPCNKNLNLRLKFYSPGSIPKPSVVTVSSNHQT-------------- 81

Query: 112 PKKPCTCSPTTHPGSFRCSLHKKSGSGIHQHQASSSAYSSS---------------GLNM 171
            K+ C CSPTTHPGSFRCS H++      +H+ S +  SS+               GLN+
Sbjct: 82  -KRKCLCSPTTHPGSFRCSFHRRL-----EHEKSKTLASSTVKRNNRGDNTIRVNVGLNL 141

Query: 172 RRSAMTNSLVRIGGVEGEWVKRALTA-LIRPSSHQLRRRANFRPQPSR 194
           R+ A+ NSL +IG VE E  +R+L A L +PSS    RR  FRP+ SR
Sbjct: 142 RKLALMNSLAKIGSVEAERFRRSLAANLAKPSSLHSHRRPEFRPRLSR 169

[Close]

BLAST of CsaV3_2G032230 vs. TAIR 10
Match: AT1G67910.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24577.1); Has 167 Blast hits to 167 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 41.6 bits (96), Expect = 8.9e-04
Identity = 21/43 (48.84%), Postives = 26/43 (60.47%), Query Frame = 0


Query: 81  FSIGHRTGSPTLSNRNSPVSLPKKPCTCSPTTHPGSFRCSLHK 124
           F+     GS  LS +    S+ K  C CSPTTHPGSFRC +H+
Sbjct: 22  FNSAVEVGSRGLSRQ---TSMTKTNCLCSPTTHPGSFRCRIHR 61

The following BLAST results are available for this feature:

BLAST of CsaV3_2G032230 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004138717.1	1.3e-105	100.00	uncharacterized protein LOC101214709 [Cucumis sativus] >KGN62968.1 hypothetical ...	[more]
XP_008445241.1	4.1e-96	93.03	PREDICTED: nuclear transcription factor Y subunit gamma-like [Cucumis melo] >KAA...	[more]
XP_038885670.1	1.2e-79	82.44	uncharacterized protein LOC120075978 [Benincasa hispida]	[more]
KAG6598561.1	4.3e-69	75.61	Protein MEMO1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023547160.1	5.6e-69	75.12	uncharacterized protein LOC111806049 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsaV3_2G032230 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_2G032230 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LME8	6.2e-106	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G382420 PE=4 SV=1	[more]
A0A5A7VCJ2	2.0e-96	93.03	Nuclear transcription factor Y subunit gamma-like OS=Cucumis melo var. makuwa OX...	[more]
A0A1S3BC71	2.0e-96	93.03	nuclear transcription factor Y subunit gamma-like OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A6J1BPT3	8.0e-69	74.27	uncharacterized protein LOC111004669 OS=Momordica charantia OX=3673 GN=LOC111004...	[more]
A0A6J1HGM5	3.9e-68	75.12	uncharacterized protein LOC111462780 OS=Cucurbita moschata OX=3662 GN=LOC1114627...	[more]

BLAST of CsaV3_2G032230 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G11090.1	3.7e-50	53.74	serine-rich protein-related	[more]
AT5G25280.1	6.1e-45	56.15	serine-rich protein-related	[more]
AT5G25280.2	6.1e-45	56.15	serine-rich protein-related	[more]
AT5G20370.1	5.9e-16	37.50	serine-rich protein-related	[more]
AT1G67910.1	8.9e-04	48.84	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 179..201
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 84..114
None	No IPR available	PANTHER	PTHR33132	OSJNBB0118P14.9 PROTEIN	coord: 18..201
None	No IPR available	PANTHER	PTHR33132:SF80	BNACNNG20100D PROTEIN	coord: 18..201

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_2G032230.1	CsaV3_2G032230.1	mRNA