CsaV3_2G032180 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_2G032180
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr2: 21224532 .. 21225670 (-)
RNA-Seq ExpressionCsaV3_2G032180
SyntenyCsaV3_2G032180
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTGCATCAGTTTCATATGGTGGCTTCTATGGTTATCTATCAAACTTTTCTGGGAGCAGGAATTTGGCTAGAAAATTTGATACAAGTTATCTGCGAGGTAGTGACTTTAATATCTTGAATCAGATGAGGAAAATTGCAGTACAGCTCAAAATCTTGGGCACGCTAATTTTTCATGTTTACTTCTGGGTTGAAGTTAAATTGCATAAAAAGTCATTTATAACAGAAACCAACACTGAAGATCTAACTGTATACTACATGAATATGATGCTCAGTTCTGGGTTGAAGTACTAATAGAACTTGGTTGTGATAAACCTTGGGCCTGAGAAATGGGCTCGTCTATTGATCCTTTTTAAATTTCTTAACGTACATATGGAGTCTCCAGCTATGCAAGCTACCTGCTTTGGACCAATAAAGGATTTGGAACTAGATTTTGAAAATACCAAACTGAAAAGATAACTTTTCAGCAGGCTATTTTAGTGTAGAAGGAAAAAACTAGCCATCTGAGCCGTGAAGGAATTTCCACTATAAATCATTGATCAGTTGAATTTGAATCACATGGGTTAAAATTAAGAATATGAATTTCTGAACTCTTTCCAATTCAGAGCTAGCTGACATTGATAGGTGGTTATTGTATCTAGTTGTGTTAGCTGAAATGTAGGCTCAATCAAGATAGATACTTGTCATGAGGGTTTAATCAAGCACTCAAAAGAAAAGGCCAAGAAAGAAAGAGGTAGTTTGTTGAAGGAATAATCAAGTAAGAAAACGGATGATAATTGCTTCTAAATTACAACTTTAGACTCGGTTTGCAATATCAAATTCATTCCGTCTCAGCTTCAACTCAATCATCTTTTCGACTGTTTTTCGGTCTTCAAGATTCCATTTTCCTTCATCATGGATTCCTATTTCTGATTGCATTCTTTGGACTGGGGGGATGGGATGAGAAAAGGAAAGGGTGTGGATGGATGAGAATGAAGATGAGTGAATCCAAGGAAGTTGCAATCAGAAATCTTTACAGATCAAATGGTAGATTGAGGAACCCACTCCATTCTCTAAAGACGTCATGCTGTCAGAACAGAATGATTGGATCCCAGAAAGTTGATTGGGAGGTCATTTCACGAGATGCTCTTTTCTTCTAA

mRNA sequence

ATGTTTGCATCAGTTTCATATGGTGGCTTCTATGGTTATCTATCAAACTTTTCTGGGAGCAGGAATTTGGCTAGAAAATTTGATACAAGTTATCTGCGAGGTAGTGACTTTAATATCTTGAATCAGATGAGGAAAATTGCAGTACAGCTCAAAATCTTGGGCACGCTAATTTTTCATGTTTACTTCTGGGTTGAAGTTAAATTGCATAAAAAGTCATTTATAACAGAAACCAACACTGAAGATCTAACTGTATACTACATGAATATGATGCTCAGTTCTGGGTTGAAACTCGGTTTGCAATATCAAATTCATTCCGTCTCAGCTTCAACTCAATCATCTTTTCGACTGTTTTTCGGTCTTCAAGATTCCATTTTCCTTCATCATGGATTCCTATTTCTGATTGCATTCTTTGGACTGGGGGGATGGGATGAGAAAAGGAAAGGGTGTGGATGGATGAGAATGAAGATGAGTGAATCCAAGGAAGTTGCAATCAGAAATCTTTACAGATCAAATGGTAGATTGAGGAACCCACTCCATTCTCTAAAGACGTCATGCTGTCAGAACAGAATGATTGGATCCCAGAAAGTTGATTGGGAGGTCATTTCACGAGATGCTCTTTTCTTCTAA

Coding sequence (CDS)

ATGTTTGCATCAGTTTCATATGGTGGCTTCTATGGTTATCTATCAAACTTTTCTGGGAGCAGGAATTTGGCTAGAAAATTTGATACAAGTTATCTGCGAGGTAGTGACTTTAATATCTTGAATCAGATGAGGAAAATTGCAGTACAGCTCAAAATCTTGGGCACGCTAATTTTTCATGTTTACTTCTGGGTTGAAGTTAAATTGCATAAAAAGTCATTTATAACAGAAACCAACACTGAAGATCTAACTGTATACTACATGAATATGATGCTCAGTTCTGGGTTGAAACTCGGTTTGCAATATCAAATTCATTCCGTCTCAGCTTCAACTCAATCATCTTTTCGACTGTTTTTCGGTCTTCAAGATTCCATTTTCCTTCATCATGGATTCCTATTTCTGATTGCATTCTTTGGACTGGGGGGATGGGATGAGAAAAGGAAAGGGTGTGGATGGATGAGAATGAAGATGAGTGAATCCAAGGAAGTTGCAATCAGAAATCTTTACAGATCAAATGGTAGATTGAGGAACCCACTCCATTCTCTAAAGACGTCATGCTGTCAGAACAGAATGATTGGATCCCAGAAAGTTGATTGGGAGGTCATTTCACGAGATGCTCTTTTCTTCTAA

Protein sequence

MFASVSYGGFYGYLSNFSGSRNLARKFDTSYLRGSDFNILNQMRKIAVQLKILGTLIFHVYFWVEVKLHKKSFITETNTEDLTVYYMNMMLSSGLKLGLQYQIHSVSASTQSSFRLFFGLQDSIFLHHGFLFLIAFFGLGGWDEKRKGCGWMRMKMSESKEVAIRNLYRSNGRLRNPLHSLKTSCCQNRMIGSQKVDWEVISRDALFF*
Homology
[Close]
BLAST of CsaV3_2G032180 vs. NCBI nr
Match: KGN62963.1 (hypothetical protein Csa_021936 [Cucumis sativus])

HSP 1 Score: 419.5 bits (1077), Expect = 1.7e-113
Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 0 

Query: 1   MFASVSYGGFYGYLSNFSGSRNLARKFDTSYLRGSDFNILNQMRKIAVQLKILGTLIFHV 60
           MFASVSYGGFYGYLSNFSGSRNLARKFDTSYLRGSDFNILNQMRKIAVQLKILGTLIFHV
Sbjct: 1   MFASVSYGGFYGYLSNFSGSRNLARKFDTSYLRGSDFNILNQMRKIAVQLKILGTLIFHV 60

Query: 61  YFWVEVKLHKKSFITETNTEDLTVYYMNMMLSSGLKLGLQYQIHSVSASTQSSFRLFFGL 120
           YFWVEVKLHKKSFITETNTEDLTVYYMNMMLSSGLKLGLQYQIHSVSASTQSSFRLFFGL
Sbjct: 61  YFWVEVKLHKKSFITETNTEDLTVYYMNMMLSSGLKLGLQYQIHSVSASTQSSFRLFFGL 120

Query: 121 QDSIFLHHGFLFLIAFFGLGGWDEKRKGCGWMRMKMSESKEVAIRNLYRSNGRLRNPLHS 180
           QDSIFLHHGFLFLIAFFGLGGWDEKRKGCGWMRMKMSESKEVAIRNLYRSNGRLRNPLHS
Sbjct: 121 QDSIFLHHGFLFLIAFFGLGGWDEKRKGCGWMRMKMSESKEVAIRNLYRSNGRLRNPLHS 180

Query: 181 LKTSCCQNRMIGSQKVDWEVISRDALFF 209
           LKTSCCQNRMIGSQKVDWEVISRDALFF
Sbjct: 181 LKTSCCQNRMIGSQKVDWEVISRDALFF 208

[Close]
BLAST of CsaV3_2G032180 vs. ExPASy TrEMBL
Match: A0A0A0LME2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G381880 PE=4 SV=1)

HSP 1 Score: 419.5 bits (1077), Expect = 8.4e-114
Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 0 

Query: 1   MFASVSYGGFYGYLSNFSGSRNLARKFDTSYLRGSDFNILNQMRKIAVQLKILGTLIFHV 60
           MFASVSYGGFYGYLSNFSGSRNLARKFDTSYLRGSDFNILNQMRKIAVQLKILGTLIFHV
Sbjct: 1   MFASVSYGGFYGYLSNFSGSRNLARKFDTSYLRGSDFNILNQMRKIAVQLKILGTLIFHV 60

Query: 61  YFWVEVKLHKKSFITETNTEDLTVYYMNMMLSSGLKLGLQYQIHSVSASTQSSFRLFFGL 120
           YFWVEVKLHKKSFITETNTEDLTVYYMNMMLSSGLKLGLQYQIHSVSASTQSSFRLFFGL
Sbjct: 61  YFWVEVKLHKKSFITETNTEDLTVYYMNMMLSSGLKLGLQYQIHSVSASTQSSFRLFFGL 120

Query: 121 QDSIFLHHGFLFLIAFFGLGGWDEKRKGCGWMRMKMSESKEVAIRNLYRSNGRLRNPLHS 180
           QDSIFLHHGFLFLIAFFGLGGWDEKRKGCGWMRMKMSESKEVAIRNLYRSNGRLRNPLHS
Sbjct: 121 QDSIFLHHGFLFLIAFFGLGGWDEKRKGCGWMRMKMSESKEVAIRNLYRSNGRLRNPLHS 180

Query: 181 LKTSCCQNRMIGSQKVDWEVISRDALFF 209
           LKTSCCQNRMIGSQKVDWEVISRDALFF
Sbjct: 181 LKTSCCQNRMIGSQKVDWEVISRDALFF 208

The following BLAST results are available for this feature:
BLAST of CsaV3_2G032180 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN62963.11.7e-113100.00hypothetical protein Csa_021936 [Cucumis sativus][more]
BLAST of CsaV3_2G032180 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_2G032180 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LME28.4e-114100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G381880 PE=4 SV=1[more]
BLAST of CsaV3_2G032180 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_2G032180.1CsaV3_2G032180.1mRNA