CsaV3_2G031960 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_2G031960
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	transcription factor HY5-like
Location	chr2: 21119611 .. 21122120 (+)
RNA-Seq Expression	CsaV3_2G031960
Synteny	CsaV3_2G031960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AGATAATTATGTTAGGGGAAAAATGAGTTTGGCATTAAACTTAGGCAGTTAAGAGAGGGGTGGGACAATAACCCGATTGGAATTCCGGAACGGCGGACGCTTTTTTATTTGTAAAGAGTACGAAATGGTCCCAACCAAGAAGTACAAACTTCTAATCCTACCCATCTGATCTCAGATCCCATCCAACGACACACACTTCACCACGTTCCTTTTAAAAACACCTTTGATTTCCACATCTTCTCATGGCCAAGACACATCCACGTTCTAGTTTCGGAAGCCGTCGGATCAAACAACATTTAACGGCGTGAATCCATCCTTCAGTCCTTGCTTTCTCAGTTAATTTTCAGTGTGAAGCCTTTTATGTCCCGCTCTTTCTCTCTTTCTCTCTTTCTCTCTTTCTGGAAAATATCTGAACGGAATAAATTTAAATAATTGCAAAAGGGATTTTTATCGACCTCTGTCTTTCTTTGTTCGAAGCTCTTCTTTTTCTTTTCTTTTTTTTTTTTGGGTAAGTTTTGGTTTTGGTTGACGAAGAAATGCAGGAGCAAGCGACGAGTTCAGCCGCCGCTAGTTCTCTGCCTTCGAGCAGTGAAAGATCTTCCAGCTCTGCTCTTCACCTCGAAGTTAAAGAAGGTTAATCTTTATCTTCTTTCTCGAATCTGATCGTTTCTATCTGCTGATTTCATCCATATTCATACATAATTTAGGGGGTTTCCTTCATTTTTTTTTTCTTTTTGGGGTTTGAATTTTGTGTGTAATGGATGTTTGGTGAGAGAAATTTAGGAATGGAGAGCGATGAGGAGATCCGGAGAGTGCCGGAGATAGGCGGGGAATCGGCGGGAACATCGGCTTCCGGGAGGGATACTGGTTCGGTAGCCGGTCCGGACCGGGTTCAAGTTTCTCGGGAGGGTCAAAGGAAAAGAGGGAGAAGTCCGGCTGATAAAGAAAGCAAGAGACTCAAGAGGTGAGGCAAAACGCATGCCGTTTTGGTACTTTTTAGTCCTTTAAGTTTCTCATTTTGTCTCGTTTTTCTAATTTTTAACAAAAGTCAAGCATTCTATTAGATATTTAATTAAAATTATTTCATAAAATTTTTTTTAAAAAAAAAAAAAACTTTCCCTTTTTCTCTTTAGGTTATAAACTTTGTTTTTTTACTAAGTTTGTTTTGAAATGTTTTATTATTTTTTTACTCAACTTTAAAATTTGTTTAAATGAAAGAAAATGAAATTTAAATTGATATGTTTATCCTTCAATCGTAGTCTTATTTCAACTTCAAAATGAAAAAGAAAAAAGAAAAGAAAAAAGGGCACTTTTTTTTCTTGAAATTGAGGTTTCGGATTGTTGAAGCTATTTATTTAAAATTGGATTTAGATTGCTGAGGAATAGGGTATCGGCACAGCAAGCAAGGGAGAGAAAAAAGGCGTATTTGAATGATTTAGAGATAAGGGTGAAGGATTTGGAGAAGAAGAACTCTGAACTTGAAGAAAGGCTTTCCACTTTACAGAATGAGAATCAGATGCTTAGACAAGTAAGTTTAATTAATTACTCTAATCATTCCTTCCATTTAACATTCCATAATTATATTCTTTTAACTTTTTTCTATTTTACTTATGCTGCTGGGCTTTCTATGATAGACCCAAATTCATTGGCTGATACGATGAAATTTGGTTTTTTTTTTTTTTTTTTTTTTCTTAACAAAACATTTTTCTATTTCTAATTGTAGATTTTGAAGAACACAACGGCAAGTAGGAGAAGCGGTGAGTGAGAGGGAGGAGAGTATTTTGTTACACCTGATCAGTTCTGATCAAATATGATAAGTTACTGCCAAAGTTTGGTAATTTAATTTATCTTGTTTTTTTGTTTTTTTATACTCATTTTTTTCCTTTCCATCTTCCATTCGAAGAAAGAAGTAGCTAATTTGTCAATCTTTCATGTTGACCTGAGGTCTAAGGAGATTCTTGTACTTCTATGGAATTGAAGTTTCTATAAAAACTGATCAAACAGAGTAACGGTTTATAAAACAATTTGCCTATTCAACCTTGCAACAATGATCTTCAAACTCGAGATAGAAAAAGATTTTAGTAAGATAATGTACATCGACTGTTCTTATTTGGTACGTAAGGATTTCATGCAATAATGTTGATGAGCTACTTCATTGCTGGAGCACCTGCATTTTTCTTTGTGAAGGACCTATTTTAGTTGAAGTCAGTATGAACTTGGTTGACAACTACACTCGTGACTTCGGCCCAAATTCAGTTGCCTGTCTTGCCATCCATGGATATGACCAATCACTCCCAGGAACGACACTGGAGATGTTCCACTAGAACAAGTAATTATGCATTGACTAACAATGGGAACAATATCATATAAGAGATTATCCAAATAAATAGTTTAAAAAAGAAAATTCAGCTCTAGCCTTTCTAAGGGGATCCTGGAACTGAATCTTAGCAAAACACCAGAAATCTAGTTAAAGAGTTGGGGGAGTGGGGCCAAAATAAAAGCTAAGGGAG

mRNA sequence

ATGCAGGAGCAAGCGACGAGTTCAGCCGCCGCTAGTTCTCTGCCTTCGAGCAGTGAAAGATCTTCCAGCTCTGCTCTTCACCTCGAAGTTAAAGAAGGAATGGAGAGCGATGAGGAGATCCGGAGAGTGCCGGAGATAGGCGGGGAATCGGCGGGAACATCGGCTTCCGGGAGGGATACTGGTTCGGTAGCCGGTCCGGACCGGGTTCAAGTTTCTCGGGAGGGTCAAAGGAAAAGAGGGAGAAGTCCGGCTGATAAAGAAAGCAAGAGACTCAAGAGATTGCTGAGGAATAGGGTATCGGCACAGCAAGCAAGGGAGAGAAAAAAGGCGTATTTGAATGATTTAGAGATAAGGGTGAAGGATTTGGAGAAGAAGAACTCTGAACTTGAAGAAAGGCTTTCCACTTTACAGAATGAGAATCAGATGCTTAGACAAATTTTGAAGAACACAACGGCAAGTAGGAGAAGCGGTGAGTGA

Coding sequence (CDS)

ATGCAGGAGCAAGCGACGAGTTCAGCCGCCGCTAGTTCTCTGCCTTCGAGCAGTGAAAGATCTTCCAGCTCTGCTCTTCACCTCGAAGTTAAAGAAGGAATGGAGAGCGATGAGGAGATCCGGAGAGTGCCGGAGATAGGCGGGGAATCGGCGGGAACATCGGCTTCCGGGAGGGATACTGGTTCGGTAGCCGGTCCGGACCGGGTTCAAGTTTCTCGGGAGGGTCAAAGGAAAAGAGGGAGAAGTCCGGCTGATAAAGAAAGCAAGAGACTCAAGAGATTGCTGAGGAATAGGGTATCGGCACAGCAAGCAAGGGAGAGAAAAAAGGCGTATTTGAATGATTTAGAGATAAGGGTGAAGGATTTGGAGAAGAAGAACTCTGAACTTGAAGAAAGGCTTTCCACTTTACAGAATGAGAATCAGATGCTTAGACAAATTTTGAAGAACACAACGGCAAGTAGGAGAAGCGGTGAGTGA

Protein sequence

MQEQATSSAAASSLPSSSERSSSSALHLEVKEGMESDEEIRRVPEIGGESAGTSASGRDTGSVAGPDRVQVSREGQRKRGRSPADKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRVKDLEKKNSELEERLSTLQNENQMLRQILKNTTASRRSGE*

Homology

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BLAST of CsaV3_2G031960 vs. NCBI nr
Match: NP_001284656.1 (Transcription factor HY5-like [Cucumis melo] >XP_004138731.1 transcription factor HY5 [Cucumis sativus] >XP_022131702.1 transcription factor HY5-like [Momordica charantia] >XP_038885580.1 transcription factor HY5-like [Benincasa hispida] >KAA0064935.1 transcription factor HY5 [Cucumis melo var. makuwa] >ADX23549.1 bZIP2 [Cucumis melo] >KGN62939.1 hypothetical protein Csa_022614 [Cucumis sativus])

HSP 1 Score: 271.2 bits (692), Expect = 5.8e-69
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MQEQATSSAAASSLPSSSERSSSSALHLEVKEGMESDEEIRRVPEIGGESAGTSASGRDT 60
           MQEQATSSAAASSLPSSSERSSSSALHLEVKEGMESDEEIRRVPEIGGESAGTSASGRDT
Sbjct: 1   MQEQATSSAAASSLPSSSERSSSSALHLEVKEGMESDEEIRRVPEIGGESAGTSASGRDT 60

Query: 61  GSVAGPDRVQVSREGQRKRGRSPADKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRVK 120
           GSVAGPDRVQVSREGQRKRGRSPADKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRVK
Sbjct: 61  GSVAGPDRVQVSREGQRKRGRSPADKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRVK 120

Query: 121 DLEKKNSELEERLSTLQNENQMLRQILKNTTASRRSGE 159
           DLEKKNSELEERLSTLQNENQMLRQILKNTTASRRSGE
Sbjct: 121 DLEKKNSELEERLSTLQNENQMLRQILKNTTASRRSGE 158

[Close]

BLAST of CsaV3_2G031960 vs. NCBI nr
Match: XP_022996780.1 (transcription factor HY5-like [Cucurbita maxima])

HSP 1 Score: 263.8 bits (673), Expect = 9.3e-67
Identity = 153/158 (96.84%), Postives = 157/158 (99.37%), Query Frame = 0


Query: 1   MQEQATSSAAASSLPSSSERSSSSALHLEVKEGMESDEEIRRVPEIGGESAGTSASGRDT 60
           MQEQATSSAAASSLPSSSERSSSSALHLE+KEGMESDEEIRRVPEIGGESAGTSASGR+T
Sbjct: 1   MQEQATSSAAASSLPSSSERSSSSALHLELKEGMESDEEIRRVPEIGGESAGTSASGRET 60

Query: 61  GSVAGPDRVQVSREGQRKRGRSPADKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRVK 120
           GS+AGPDRVQVSRE QRKRGR+PADKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRVK
Sbjct: 61  GSLAGPDRVQVSRESQRKRGRTPADKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRVK 120

Query: 121 DLEKKNSELEERLSTLQNENQMLRQILKNTTASRRSGE 159
           DLEKKNSELEERLSTLQNENQMLRQILKNTTASRRSGE
Sbjct: 121 DLEKKNSELEERLSTLQNENQMLRQILKNTTASRRSGE 158

[Close]

BLAST of CsaV3_2G031960 vs. NCBI nr
Match: KAG6598576.1 (Transcription factor HY5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 263.5 bits (672), Expect = 1.2e-66
Identity = 153/158 (96.84%), Postives = 157/158 (99.37%), Query Frame = 0


Query: 1   MQEQATSSAAASSLPSSSERSSSSALHLEVKEGMESDEEIRRVPEIGGESAGTSASGRDT 60
           MQEQATSSAAASSLPSSSERSSSSALHLEVKEG+ESDEEIRRVPEIGGESAGTSASGR+T
Sbjct: 1   MQEQATSSAAASSLPSSSERSSSSALHLEVKEGIESDEEIRRVPEIGGESAGTSASGRET 60

Query: 61  GSVAGPDRVQVSREGQRKRGRSPADKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRVK 120
           GS+AGPDRVQVSRE QRKRGR+PADKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRVK
Sbjct: 61  GSLAGPDRVQVSRESQRKRGRTPADKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRVK 120

Query: 121 DLEKKNSELEERLSTLQNENQMLRQILKNTTASRRSGE 159
           DLEKKNSELEERLSTLQNENQMLRQILKNTTASRRSGE
Sbjct: 121 DLEKKNSELEERLSTLQNENQMLRQILKNTTASRRSGE 158

[Close]

BLAST of CsaV3_2G031960 vs. NCBI nr
Match: XP_023545723.1 (transcription factor HY5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 262.7 bits (670), Expect = 2.1e-66
Identity = 153/158 (96.84%), Postives = 156/158 (98.73%), Query Frame = 0


Query: 1   MQEQATSSAAASSLPSSSERSSSSALHLEVKEGMESDEEIRRVPEIGGESAGTSASGRDT 60
           MQEQATSSAAASSLPSSSERSSSSALHLEVKEGMESDEEIRRVPEIGGESAGTSASGR+T
Sbjct: 1   MQEQATSSAAASSLPSSSERSSSSALHLEVKEGMESDEEIRRVPEIGGESAGTSASGRET 60

Query: 61  GSVAGPDRVQVSREGQRKRGRSPADKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRVK 120
           G +AGPDRVQVSRE QRKRGR+PADKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRVK
Sbjct: 61  GLLAGPDRVQVSRESQRKRGRTPADKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRVK 120

Query: 121 DLEKKNSELEERLSTLQNENQMLRQILKNTTASRRSGE 159
           DLEKKNSELEERLSTLQNENQMLRQILKNTTASRRSGE
Sbjct: 121 DLEKKNSELEERLSTLQNENQMLRQILKNTTASRRSGE 158

[Close]

BLAST of CsaV3_2G031960 vs. NCBI nr
Match: XP_022962152.1 (transcription factor HY5-like [Cucurbita moschata])

HSP 1 Score: 261.2 bits (666), Expect = 6.0e-66
Identity = 152/158 (96.20%), Postives = 156/158 (98.73%), Query Frame = 0


Query: 1   MQEQATSSAAASSLPSSSERSSSSALHLEVKEGMESDEEIRRVPEIGGESAGTSASGRDT 60
           MQEQATSSAAASSLPSSSERSSSSALHLEVKEG+ESDEEIRRVPEIGGESAGTSASGR+T
Sbjct: 1   MQEQATSSAAASSLPSSSERSSSSALHLEVKEGIESDEEIRRVPEIGGESAGTSASGRET 60

Query: 61  GSVAGPDRVQVSREGQRKRGRSPADKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRVK 120
            S+AGPDRVQVSRE QRKRGR+PADKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRVK
Sbjct: 61  SSLAGPDRVQVSRESQRKRGRTPADKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRVK 120

Query: 121 DLEKKNSELEERLSTLQNENQMLRQILKNTTASRRSGE 159
           DLEKKNSELEERLSTLQNENQMLRQILKNTTASRRSGE
Sbjct: 121 DLEKKNSELEERLSTLQNENQMLRQILKNTTASRRSGE 158

[Close]

BLAST of CsaV3_2G031960 vs. ExPASy Swiss-Prot
Match: O24646 (Transcription factor HY5 OS=Arabidopsis thaliana OX=3702 GN=HY5 PE=1 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 3.6e-53
Identity = 124/158 (78.48%), Postives = 138/158 (87.34%), Query Frame = 0


Query: 1   MQEQATSSAAASSLPSSSERSSSSALHLEVKEGMESDEEIRRVPEIGGESAGTSASGRDT 60
           MQEQATSS AASSLPSSSERSSSSA HLE+KEG+ESDEEIRRVPE GGE+ G   SGR++
Sbjct: 1   MQEQATSSLAASSLPSSSERSSSSAPHLEIKEGIESDEEIRRVPEFGGEAVGKETSGRES 60

Query: 61  GSVAGPDRVQVS-REGQRKRGRSPADKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRV 120
           GS  G +R Q +  E QRKRGR+PA+KE+KRLKRLLRNRVSAQQARERKKAYL++LE RV
Sbjct: 61  GSATGQERTQATVGESQRKRGRTPAEKENKRLKRLLRNRVSAQQARERKKAYLSELENRV 120

Query: 121 KDLEKKNSELEERLSTLQNENQMLRQILKNTTASRRSG 158
           KDLE KNSELEERLSTLQNENQMLR ILKNTT ++R G
Sbjct: 121 KDLENKNSELEERLSTLQNENQMLRHILKNTTGNKRGG 158

[Close]

BLAST of CsaV3_2G031960 vs. ExPASy Swiss-Prot
Match: Q9SM50 (Transcription factor HY5 OS=Solanum lycopersicum OX=4081 GN=HY5 PE=2 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 3.3e-51
Identity = 128/158 (81.01%), Postives = 137/158 (86.71%), Query Frame = 0


Query: 1   MQEQATSSAAASSLPSSSERSSSSALHLEVKEGMESDEEIRRVPEIGGESAG-TSASGRD 60
           MQEQATSS AASSLPSSSERSSSSALH E+KEGMESD+EIRRVPE+GGE+ G TSASGRD
Sbjct: 1   MQEQATSSIAASSLPSSSERSSSSALHHELKEGMESDDEIRRVPEMGGEATGTTSASGRD 60

Query: 61  TGSVAGPDRVQVSREGQRKRGRSPADKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRV 120
             S AG  + Q S   QRKRGRSPADKE+KRLKRLLRNRVSAQQARERKKAYL DLE RV
Sbjct: 61  GVSAAG--QAQPSAGTQRKRGRSPADKENKRLKRLLRNRVSAQQARERKKAYLIDLEARV 120

Query: 121 KDLEKKNSELEERLSTLQNENQMLRQILKNTTASRRSG 158
           K+LE KN+ELEERLSTLQNENQMLR ILKNTTA  + G
Sbjct: 121 KELETKNAELEERLSTLQNENQMLRHILKNTTAGAQEG 156

[Close]

BLAST of CsaV3_2G031960 vs. ExPASy Swiss-Prot
Match: Q8W191 (Transcription factor HY5-like OS=Arabidopsis thaliana OX=3702 GN=HYH PE=1 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 4.4e-19
Identity = 73/144 (50.69%), Postives = 97/144 (67.36%), Query Frame = 0


Query: 13  SLPSSSERSSSSALHLEVKEGMESDEEIRRVPEIGGESAGTS---ASGRDTGSVAGPDRV 72
           SL   +  SSSS+ H + K   ESDEE+  VP++  E+AG++   +S  D G V  P+  
Sbjct: 2   SLQRPNGNSSSSSSHKKHKT-EESDEELLMVPDM--EAAGSTCVLSSSADDG-VNNPELD 61

Query: 73  QVSR---EGQRKRGRSPADKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRVKDLEKKN 132
           Q        +R+RGR+P DKE + LKRLLRNRVSAQQARERKK Y++DLE R  +L+  N
Sbjct: 62  QTQNGVSTAKRRRGRNPVDKEYRSLKRLLRNRVSAQQARERKKVYVSDLESRANELQNNN 121

Query: 133 SELEERLSTLQNENQMLRQILKNT 151
            +LEE++STL NEN MLR++L NT
Sbjct: 122 DQLEEKISTLTNENTMLRKMLINT 141

[Close]

BLAST of CsaV3_2G031960 vs. ExPASy Swiss-Prot
Match: Q54WN7 (Probable basic-leucine zipper transcription factor F OS=Dictyostelium discoideum OX=44689 GN=bzpF PE=3 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 3.6e-05
Identity = 28/63 (44.44%), Postives = 44/63 (69.84%), Query Frame = 0


Query: 85  DKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRVKDLEKKNSELEERLSTLQNENQMLR 144
           ++  KR +RL++NR +AQ  R+R+KAY+ DLE +V DL   NSE   R+  L +EN+++R
Sbjct: 403 ERHQKRQRRLVKNREAAQLFRQRQKAYIQDLEKKVSDLTGTNSEFRARVELLNSENKLIR 462

Query: 145 QIL 148
           + L
Sbjct: 463 EQL 465

[Close]

BLAST of CsaV3_2G031960 vs. ExPASy Swiss-Prot
Match: Q8TFU8 (Transcriptional activator hacA OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=hacA PE=2 SV=2)

HSP 1 Score: 48.5 bits (114), Expect = 8.0e-05
Identity = 31/79 (39.24%), Postives = 51/79 (64.56%), Query Frame = 0


Query: 77  RKRGRSPADKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRVKDLEKKNSELEERLSTL 136
           RKR ++  +KE +R++R+LRNR +AQ +RERK+  +  LE    D+E++N  L +RL+ +
Sbjct: 77  RKRAKTEDEKEQRRIERVLRNRAAAQTSRERKRLEMEKLESEKIDMEQQNQFLLQRLAQM 136

Query: 137 QNENQMLRQILKNTTASRR 156
           + EN  L Q +   +A  R
Sbjct: 137 EAENNRLSQQVAQLSAEVR 155

[Close]

BLAST of CsaV3_2G031960 vs. ExPASy TrEMBL
Match: F1DQG1 (BZIP2 OS=Cucumis melo OX=3656 GN=LOC103488299 PE=2 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 2.8e-69
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MQEQATSSAAASSLPSSSERSSSSALHLEVKEGMESDEEIRRVPEIGGESAGTSASGRDT 60
           MQEQATSSAAASSLPSSSERSSSSALHLEVKEGMESDEEIRRVPEIGGESAGTSASGRDT
Sbjct: 1   MQEQATSSAAASSLPSSSERSSSSALHLEVKEGMESDEEIRRVPEIGGESAGTSASGRDT 60

Query: 61  GSVAGPDRVQVSREGQRKRGRSPADKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRVK 120
           GSVAGPDRVQVSREGQRKRGRSPADKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRVK
Sbjct: 61  GSVAGPDRVQVSREGQRKRGRSPADKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRVK 120

Query: 121 DLEKKNSELEERLSTLQNENQMLRQILKNTTASRRSGE 159
           DLEKKNSELEERLSTLQNENQMLRQILKNTTASRRSGE
Sbjct: 121 DLEKKNSELEERLSTLQNENQMLRQILKNTTASRRSGE 158

[Close]

BLAST of CsaV3_2G031960 vs. ExPASy TrEMBL
Match: A0A5A7VGC0 (Transcription factor HY5 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G002530 PE=3 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 2.8e-69
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MQEQATSSAAASSLPSSSERSSSSALHLEVKEGMESDEEIRRVPEIGGESAGTSASGRDT 60
           MQEQATSSAAASSLPSSSERSSSSALHLEVKEGMESDEEIRRVPEIGGESAGTSASGRDT
Sbjct: 1   MQEQATSSAAASSLPSSSERSSSSALHLEVKEGMESDEEIRRVPEIGGESAGTSASGRDT 60

Query: 61  GSVAGPDRVQVSREGQRKRGRSPADKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRVK 120
           GSVAGPDRVQVSREGQRKRGRSPADKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRVK
Sbjct: 61  GSVAGPDRVQVSREGQRKRGRSPADKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRVK 120

Query: 121 DLEKKNSELEERLSTLQNENQMLRQILKNTTASRRSGE 159
           DLEKKNSELEERLSTLQNENQMLRQILKNTTASRRSGE
Sbjct: 121 DLEKKNSELEERLSTLQNENQMLRQILKNTTASRRSGE 158

[Close]

BLAST of CsaV3_2G031960 vs. ExPASy TrEMBL
Match: A0A0A0LPK1 (BZIP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G381650 PE=3 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 2.8e-69
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MQEQATSSAAASSLPSSSERSSSSALHLEVKEGMESDEEIRRVPEIGGESAGTSASGRDT 60
           MQEQATSSAAASSLPSSSERSSSSALHLEVKEGMESDEEIRRVPEIGGESAGTSASGRDT
Sbjct: 1   MQEQATSSAAASSLPSSSERSSSSALHLEVKEGMESDEEIRRVPEIGGESAGTSASGRDT 60

Query: 61  GSVAGPDRVQVSREGQRKRGRSPADKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRVK 120
           GSVAGPDRVQVSREGQRKRGRSPADKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRVK
Sbjct: 61  GSVAGPDRVQVSREGQRKRGRSPADKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRVK 120

Query: 121 DLEKKNSELEERLSTLQNENQMLRQILKNTTASRRSGE 159
           DLEKKNSELEERLSTLQNENQMLRQILKNTTASRRSGE
Sbjct: 121 DLEKKNSELEERLSTLQNENQMLRQILKNTTASRRSGE 158

[Close]

BLAST of CsaV3_2G031960 vs. ExPASy TrEMBL
Match: A0A6J1BRS2 (transcription factor HY5-like OS=Momordica charantia OX=3673 GN=LOC111004810 PE=3 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 2.8e-69
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MQEQATSSAAASSLPSSSERSSSSALHLEVKEGMESDEEIRRVPEIGGESAGTSASGRDT 60
           MQEQATSSAAASSLPSSSERSSSSALHLEVKEGMESDEEIRRVPEIGGESAGTSASGRDT
Sbjct: 1   MQEQATSSAAASSLPSSSERSSSSALHLEVKEGMESDEEIRRVPEIGGESAGTSASGRDT 60

Query: 61  GSVAGPDRVQVSREGQRKRGRSPADKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRVK 120
           GSVAGPDRVQVSREGQRKRGRSPADKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRVK
Sbjct: 61  GSVAGPDRVQVSREGQRKRGRSPADKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRVK 120

Query: 121 DLEKKNSELEERLSTLQNENQMLRQILKNTTASRRSGE 159
           DLEKKNSELEERLSTLQNENQMLRQILKNTTASRRSGE
Sbjct: 121 DLEKKNSELEERLSTLQNENQMLRQILKNTTASRRSGE 158

[Close]

BLAST of CsaV3_2G031960 vs. ExPASy TrEMBL
Match: A0A6J1K7Q9 (transcription factor HY5-like OS=Cucurbita maxima OX=3661 GN=LOC111491914 PE=3 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 4.5e-67
Identity = 153/158 (96.84%), Postives = 157/158 (99.37%), Query Frame = 0


Query: 1   MQEQATSSAAASSLPSSSERSSSSALHLEVKEGMESDEEIRRVPEIGGESAGTSASGRDT 60
           MQEQATSSAAASSLPSSSERSSSSALHLE+KEGMESDEEIRRVPEIGGESAGTSASGR+T
Sbjct: 1   MQEQATSSAAASSLPSSSERSSSSALHLELKEGMESDEEIRRVPEIGGESAGTSASGRET 60

Query: 61  GSVAGPDRVQVSREGQRKRGRSPADKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRVK 120
           GS+AGPDRVQVSRE QRKRGR+PADKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRVK
Sbjct: 61  GSLAGPDRVQVSRESQRKRGRTPADKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRVK 120

Query: 121 DLEKKNSELEERLSTLQNENQMLRQILKNTTASRRSGE 159
           DLEKKNSELEERLSTLQNENQMLRQILKNTTASRRSGE
Sbjct: 121 DLEKKNSELEERLSTLQNENQMLRQILKNTTASRRSGE 158

[Close]

BLAST of CsaV3_2G031960 vs. TAIR 10
Match: AT5G11260.1 (Basic-leucine zipper (bZIP) transcription factor family protein )

HSP 1 Score: 209.1 bits (531), Expect = 2.5e-54
Identity = 124/158 (78.48%), Postives = 138/158 (87.34%), Query Frame = 0


Query: 1   MQEQATSSAAASSLPSSSERSSSSALHLEVKEGMESDEEIRRVPEIGGESAGTSASGRDT 60
           MQEQATSS AASSLPSSSERSSSSA HLE+KEG+ESDEEIRRVPE GGE+ G   SGR++
Sbjct: 1   MQEQATSSLAASSLPSSSERSSSSAPHLEIKEGIESDEEIRRVPEFGGEAVGKETSGRES 60

Query: 61  GSVAGPDRVQVS-REGQRKRGRSPADKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRV 120
           GS  G +R Q +  E QRKRGR+PA+KE+KRLKRLLRNRVSAQQARERKKAYL++LE RV
Sbjct: 61  GSATGQERTQATVGESQRKRGRTPAEKENKRLKRLLRNRVSAQQARERKKAYLSELENRV 120

Query: 121 KDLEKKNSELEERLSTLQNENQMLRQILKNTTASRRSG 158
           KDLE KNSELEERLSTLQNENQMLR ILKNTT ++R G
Sbjct: 121 KDLENKNSELEERLSTLQNENQMLRHILKNTTGNKRGG 158

[Close]

BLAST of CsaV3_2G031960 vs. TAIR 10
Match: AT3G17609.2 (HY5-homolog )

HSP 1 Score: 95.9 bits (237), Expect = 3.1e-20
Identity = 73/144 (50.69%), Postives = 97/144 (67.36%), Query Frame = 0


Query: 13  SLPSSSERSSSSALHLEVKEGMESDEEIRRVPEIGGESAGTS---ASGRDTGSVAGPDRV 72
           SL   +  SSSS+ H + K   ESDEE+  VP++  E+AG++   +S  D G V  P+  
Sbjct: 2   SLQRPNGNSSSSSSHKKHKT-EESDEELLMVPDM--EAAGSTCVLSSSADDG-VNNPELD 61

Query: 73  QVSR---EGQRKRGRSPADKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRVKDLEKKN 132
           Q        +R+RGR+P DKE + LKRLLRNRVSAQQARERKK Y++DLE R  +L+  N
Sbjct: 62  QTQNGVSTAKRRRGRNPVDKEYRSLKRLLRNRVSAQQARERKKVYVSDLESRANELQNNN 121

Query: 133 SELEERLSTLQNENQMLRQILKNT 151
            +LEE++STL NEN MLR++L NT
Sbjct: 122 DQLEEKISTLTNENTMLRKMLINT 141

[Close]

BLAST of CsaV3_2G031960 vs. TAIR 10
Match: AT3G17609.3 (HY5-homolog )

HSP 1 Score: 87.4 bits (215), Expect = 1.1e-17
Identity = 60/114 (52.63%), Postives = 80/114 (70.18%), Query Frame = 0


Query: 43  VPEIGGESAGTS---ASGRDTGSVAGPDRVQVSR---EGQRKRGRSPADKESKRLKRLLR 102
           VP++  E+AG++   +S  D G V  P+  Q        +R+RGR+P DKE + LKRLLR
Sbjct: 2   VPDM--EAAGSTCVLSSSADDG-VNNPELDQTQNGVSTAKRRRGRNPVDKEYRSLKRLLR 61

Query: 103 NRVSAQQARERKKAYLNDLEIRVKDLEKKNSELEERLSTLQNENQMLRQILKNT 151
           NRVSAQQARERKK Y++DLE R  +L+  N +LEE++STL NEN MLR++L NT
Sbjct: 62  NRVSAQQARERKKVYVSDLESRANELQNNNDQLEEKISTLTNENTMLRKMLINT 112

[Close]

BLAST of CsaV3_2G031960 vs. TAIR 10
Match: AT3G17609.4 (HY5-homolog )

HSP 1 Score: 86.3 bits (212), Expect = 2.5e-17
Identity = 59/128 (46.09%), Postives = 79/128 (61.72%), Query Frame = 0


Query: 26  LHLEVKEGMESDEEIRRVPEIGGESAGTSASGRDTGSVAGPDRVQVSR---EGQRKRGRS 85
           + L+   G  S     +  +  G +   S+S  D   V  P+  Q        +R+RGR+
Sbjct: 1   MSLQRPNGNSSSSSSHKKHKTAGSTCVLSSSADD--GVNNPELDQTQNGVSTAKRRRGRN 60

Query: 86  PADKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRVKDLEKKNSELEERLSTLQNENQM 145
           P DKE + LKRLLRNRVSAQQARERKK Y++DLE R  +L+  N +LEE++STL NEN M
Sbjct: 61  PVDKEYRSLKRLLRNRVSAQQARERKKVYVSDLESRANELQNNNDQLEEKISTLTNENTM 120

Query: 146 LRQILKNT 151
           LR++L NT
Sbjct: 121 LRKMLINT 126

[Close]

BLAST of CsaV3_2G031960 vs. TAIR 10
Match: AT3G17609.1 (HY5-homolog )

HSP 1 Score: 84.7 bits (208), Expect = 7.2e-17
Identity = 59/128 (46.09%), Postives = 78/128 (60.94%), Query Frame = 0


Query: 26  LHLEVKEGMESDEEIRRVPEIGGESAGTSASGRDTGSVAGPDRVQVSR---EGQRKRGRS 85
           + L+   G  S     +  +    S    +S  D G V  P+  Q        +R+RGR+
Sbjct: 1   MSLQRPNGNSSSSSSHKKHKTAAGSTCVLSSSADDG-VNNPELDQTQNGVSTAKRRRGRN 60

Query: 86  PADKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRVKDLEKKNSELEERLSTLQNENQM 145
           P DKE + LKRLLRNRVSAQQARERKK Y++DLE R  +L+  N +LEE++STL NEN M
Sbjct: 61  PVDKEYRSLKRLLRNRVSAQQARERKKVYVSDLESRANELQNNNDQLEEKISTLTNENTM 120

Query: 146 LRQILKNT 151
           LR++L NT
Sbjct: 121 LRKMLINT 127

The following BLAST results are available for this feature:

BLAST of CsaV3_2G031960 vs. NCBI nr


Match Name	E-value	Identity	Description
NP_001284656.1	5.8e-69	100.00	Transcription factor HY5-like [Cucumis melo] >XP_004138731.1 transcription facto...	[more]
XP_022996780.1	9.3e-67	96.84	transcription factor HY5-like [Cucurbita maxima]	[more]
KAG6598576.1	1.2e-66	96.84	Transcription factor HY5, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023545723.1	2.1e-66	96.84	transcription factor HY5-like [Cucurbita pepo subsp. pepo]	[more]
XP_022962152.1	6.0e-66	96.20	transcription factor HY5-like [Cucurbita moschata]	[more]

BLAST of CsaV3_2G031960 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O24646	3.6e-53	78.48	Transcription factor HY5 OS=Arabidopsis thaliana OX=3702 GN=HY5 PE=1 SV=1	[more]
Q9SM50	3.3e-51	81.01	Transcription factor HY5 OS=Solanum lycopersicum OX=4081 GN=HY5 PE=2 SV=1	[more]
Q8W191	4.4e-19	50.69	Transcription factor HY5-like OS=Arabidopsis thaliana OX=3702 GN=HYH PE=1 SV=1	[more]
Q54WN7	3.6e-05	44.44	Probable basic-leucine zipper transcription factor F OS=Dictyostelium discoideum...	[more]
Q8TFU8	8.0e-05	39.24	Transcriptional activator hacA OS=Emericella nidulans (strain FGSC A4 / ATCC 381...	[more]

BLAST of CsaV3_2G031960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
F1DQG1	2.8e-69	100.00	BZIP2 OS=Cucumis melo OX=3656 GN=LOC103488299 PE=2 SV=1	[more]
A0A5A7VGC0	2.8e-69	100.00	Transcription factor HY5 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]
A0A0A0LPK1	2.8e-69	100.00	BZIP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G381650 PE=3 S...	[more]
A0A6J1BRS2	2.8e-69	100.00	transcription factor HY5-like OS=Momordica charantia OX=3673 GN=LOC111004810 PE=...	[more]
A0A6J1K7Q9	4.5e-67	96.84	transcription factor HY5-like OS=Cucurbita maxima OX=3661 GN=LOC111491914 PE=3 S...	[more]

BLAST of CsaV3_2G031960 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G11260.1	2.5e-54	78.48	Basic-leucine zipper (bZIP) transcription factor family protein	[more]
AT3G17609.2	3.1e-20	50.69	HY5-homolog	[more]
AT3G17609.3	1.1e-17	52.63	HY5-homolog	[more]
AT3G17609.4	2.5e-17	46.09	HY5-homolog	[more]
AT3G17609.1	7.2e-17	46.09	HY5-homolog	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 84..153
None	No IPR available	GENE3D	1.20.5.490	Single helix bin	coord: 108..149 e-value: 9.9E-21 score: 75.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 71..105
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..105
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..45
None	No IPR available	PANTHER	PTHR46714:SF6	TRANSCRIPTIONAL ACTIVATOR HAC1	coord: 1..155
None	No IPR available	CDD	cd14704	bZIP_HY5-like	coord: 90..141 e-value: 5.97686E-15 score: 63.3622
None	No IPR available	SUPERFAMILY	57959	Leucine zipper domain	coord: 89..147
IPR004827	Basic-leucine zipper domain	SMART	SM00338	brlzneu	coord: 85..149 e-value: 8.6E-16 score: 68.5
IPR004827	Basic-leucine zipper domain	PFAM	PF00170	bZIP_1	coord: 86..147 e-value: 2.0E-14 score: 53.4
IPR004827	Basic-leucine zipper domain	PROSITE	PS00036	BZIP_BASIC	coord: 92..107
IPR004827	Basic-leucine zipper domain	PROSITE	PS50217	BZIP	coord: 87..150 score: 12.644833
IPR044280	Transcriptional activator Hac1/HY5	PANTHER	PTHR46714	TRANSCRIPTIONAL ACTIVATOR HAC1	coord: 1..155

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_2G031960.1	CsaV3_2G031960.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific